1 THE UTHORS. ORTHOPEDIC SURGERY PULISHED Y CHINESE ORTHOPEDIC SSOCITION ND JOHN WILEY &SONS USTRLI, LTD SIC RESERCH Paclitaxel Induce poptosis of Giant Cells Tumor of one via Signaling Wei-Yuan Xiao, MD*, Zhen Zong, MD*, Man-Le Qiu, MD, Xiu-Yuan Chen, MD, Hong-Xing Shen, MD, Li-Feng Lao, MD Department of Spine Surgery, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China Objective: To evaluate the antitumor capability and to investigate the underlying molecular mechanism of paclitaxel. Methods: First, cck-8 and apoptosis assays were used to determine survival and apoptotic effects of HS 737.T cells under treatment of paclitaxel. Next, RN-seq and bioinformatics were used to determine the differentially expressed genes and to analyze the pathway involved. Quantitative real-time polymerase chain reaction was used to verify the accuracy of some differentially expressed genes (DEG). ClueGO was used to decode and visualize functionally grouped GO terms of differentially expressed genes, and to map the DEG protein protein interactions (PPI) network. Western blotting was used to check the expression of target genes, the cleavage of Caspase-3 and PRP1, and the phosphorylation level of p53. Finally, transcriptomics, bioinformatics, and RNi were used to estimate the antitumor capability and to identify the underlying mechanisms of paclitaxel in GCT. Results: Our data revealed that paclitaxel had significant time-dependent effects on the viability and induced apoptosis of HS 737.T cells. RN-seq and bioinformatics analysis showed that apoptosis, death receptor signaling pathway, TNF signaling pathway, and TP53 regulated transcription of cell death genes pathway were closely associated with paclitaxel in the treatment of GCT. Western bolt results revealed that paclitaxel induced cleavage of Caspase-3 and PRP1, and increased the phosphorylation level of p53 in HS 737.T cells. RNi results showed that the expression level of was significantly decreased in HS737.T cells (the decrease was more than 7%). In addition, we found that the inhibitory ratios of paclitaxel on HS737.T cells deficient in were less than in HS737.T cells with empty vector (19.88 and 4.6%, respectively). Hence, our data revealed that regulated paclitaxeldriven apoptosis in HS737.T cells. Conclusion: Paclitaxel can significantly repress cell proliferation and induce apoptosis of HS 737.T cells through activating Caspase-3, PRP1, p53, and. Paclitaxel may be an effective drug in the management of GCT. Key words: poptosis; giant cell tumors of bone; paclitaxel; signaling; transcriptomics Introduction giant cell tumor of bone (GCT) is an osteolytic, locally aggressive, rarely metastasizing bone tumor. ManyGCTarebenignconnectivetissueneoplasms,such as stromal cells, osteoclast-like giant cells, and tumorassociated monocytes/macrophages 1. The stromal cells represent the neoplastic component of the tumor, because of their capacity of proliferation and invasion to peripheral tissue 2. It is well known that the transformation of cancer cells leads to an increasing trend of apoptosis. Therefore, apoptosis of multinucleated giant cells and stromal cells may increase in GCT to regulate tumor regression 3. Our understanding of the anti-proliferation and apoptosis mechanisms will enable us to put forward more rational methods of cancer treatment. Paclitaxel, which is derived from the bark of the Pacific yew tree, Taxus brevifolia, exhibits potent efficacy against ddress for correspondence Li-feng Lao, MD, Department of Spine Surgery, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, 16 Pujian Road, Shanghai, China 2127 Tel: ; Fax: ; *These authors contributed equally to the work. Disclosure: This work was supported by grants from the National Natural Science Foundation of Youth Program (No ), the Shanghai Science and Technology Fund ( ), the Municipal Human Resources Development Program for Outstanding Young Talents in Medical and Health Sciences in Shanghai (217YQ3), and the Incubating Program for Clinical Research and Innovation of Renji Hospital (PYXJS16-6, PYZY16-1). Received 9 October 218; accepted 4 November 218 Orthopaedic Surgery 219;11: DOI: /os This is an open access article under the terms of the Creative Commons ttribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
2 127 ORTHOPEDIC SURGERY VOLUME 11 NUMER 1 FERURY, 219 KILL GCT VI both breast and ovarian cancers. Mechanistically, paclitaxel selectively binds to tubulin and subsequently stabilizes microtubules, thus inhibiting cell division. Interestingly, metastatic bone lesions have been reported to better respond to a combination of paclitaxel and docetaxel than to a variety of single chemotherapeutic agents. While these clinical observations point to a beneficial effect of paclitaxel on bone lesions, the underlying mechanisms of its action remain to be established. Numerous studies have demonstrated that paclitaxel has a significant role in the modulation of the cell cycle and apoptosis in various tumor cells. Nevertheless, the mechanisms by which paclitaxel modulates the antiproliferation and apoptosis of GCT remain obscure. poptosis plays a crucial role in anticancer and disease defense. In general, the caspase-dependent apoptosis is driven by interior or exterior stimuli 4. Exterior pathways are involved in the death receptor ligands (like TRIL and TNF), which bind to their receptors (such as TNF-R1, DR3, DR4, and DR5) 5 7. When the ligands bind to death receptors, their cytoplasmic domains recruit adaptor molecules and trigger caspases cascade. Finally, they activate Caspase-8 and Caspase-1, which subsequently results in the activation of effector caspases, such as Caspase-3 or Caspase-9 7,8. The interior pathway of apoptosis destroys the mitochondrial membrane and releases apoptosisassociated proteins, like cytochrome c, which successively activates Caspase-9 and Caspase-3, inducing apoptosis 9,1. In the present study, to further elucidate the antitumor activity and mechanisms of paclitaxel on GCT, we used RN-Seq, RT-qPCR, and western blot, to reveal differentially expressed genes in the giant cell tumor cell HS 737.T under paclitaxel treatment. We then used bioinformatics to analyze the pathway that the differentially expressed genes involved. Finally, we combined transcriptomics, bioinformatics, and RNi to investigate the underlying mechanisms of paclitaxel on GCT. Materials and Methods Materials Paclitaxel was obtained from Selleck (Houston, TX, US). Cell culture products were from iological Industries (Cromwell, CT, US). Puromycin, streptomycin and penicillin, Lipofectamine 3 Transfection Reagent, RT reagent Kit, and quantitative polymerase chain reaction (qpcr) kits were from Thermo Fisher Scientific (Waltham, M, US). The CCK-8 kit was provided by Dojindo Molecular Technologies (Kumamoto, Japan). Restriction enzymes EcoRI-HF and gei-hf were provided by New England iolabs (Ipswich, M, US). plko.1-trc cloning vector was a gift from David Root (ddgene plasmid 1878; addgene:1878; RRID: ddgene_1878). Cell Line and Cell Culture Human GCT Hs 737.T (TCC, US) were grown in Dulbecco s modified eagle medium plus 1% FS, l μg/ml streptomycin and penicillin. Cell Viability ssay Cell viability was checked with a CCK-8 kit. Hs 737.T cells were exposed to paclitaxel at different concentrations ( 2 ng/ml). fter 6 48 h incubation, 2 μl CCK-8 agent was added to each well; after incubation for 1.5 h, signals were measured using a Microplate bsorbance Reader (io- Rad Laboratories, US). Flow Cytometry To investigate the impact of paclitaxel on apoptosis of GCT, Hs 737.T cells were treated with or without paclitaxel for 12 h. Next, adherent cells were trypsinized and stained with an nnexin V-FITC poptosis Staining/Detection Kit (bcam, Cambridge, M, US) following the manufacturer s instructions. The apoptotic cells were quantified by flow cytometer (Thermo Fisher Scientific, US). RN-seq nalysis RN-Library preparation and sequencing were conducted by Novogene (eijing, China). RN libraries were constructed with the Illumina mrn sample preparation kit (Illumina, San Diego, C, US) following the manufacturer s directions. Sequencing was performed using the Illumina Next- Seq5 platform (Illumina, San Diego, C, US). ioinformatics nalysis We used the DESeq to perform differentially expressed gene (DEG) analysis (P-value <.5, fold change > 2). Systematic and integrative analysis of DEG was conducted using DVID bioinformatics resources as previously described 11,12. Pathway analysis and GO nalysis were applied to determine the roles the DEG played in these biological pathways or GO terms. We also used ClueGO (Cordeliers Research Center, Paris, France) to decode and visualize functionally grouped GO terms of DEG, and to map the DEG protein protein interactions (PPI) network, following the protocol of indea et al. 13. Preparation of RN and Quantitative Real-time Polymerase Chain Reaction Total RN was isolated with TRIzol Reagent. RN integrity, concentration and purity were measured. Reverse transcription PCR was performed using the RT Reagent Kit (Thermo Fisher Scientific, Waltham, M, US). The mrn levels of interesting genes were checked by quantitative real-time polymerase chain reaction (RT-qPCR) using the SYR Green Real-Time PCR Kit (Thermo Fisher Scientific, Waltham, M, US). The qpcr primers specific for the target genes are presented in Table S1. The qpcr was performed as follows: 95 C for 25 s, 59 C for 25 s, and 72 C for 25 s, 4 cycles. Western lot nalysis Total or intracellular protein were extracted from Hs 737.T cells treated and untreated with paclitaxel, and separated by SDS-PGE, then transferred to PVDF membrane. The
3 128 ORTHOPEDIC SURGERY VOLUME 11 NUMER 1 FERURY, 219 KILL GCT VI specific antibodies of the immunoblotting were as follows: anti-β-actin, anti-prp1 (Cell Signaling, Danvers, M), anti-cleaved Caspase-3, anti-ddit4, anti-tril, anti-phospho-p53 (S15), and anti- (bcam, Cambridge, M, US). The immunoblot signals were measured and quantified using the Chemiluminescence image analysis system (Tanon Science & Technology, China). RNi To generate Hs 737.T cells deficient in, we used the protocol published previously 14. riefly, the shrn recombined plasmid was generated by ligation of -targeting shrn fragment and the plko.1-trc plasmid (double digested with restriction enzymes EcoRI-HF and gei-hf). shrn primers for can be found in Table S2. The recombinant plasmids were verified by DN sequencing. plko.1 plasmid encoding -targeting shrn was transfected into 293T cells by Lipofectamine 3 Transfection Reagent (Thermo Fisher Scientific, Waltham, M, US). Lentiviral particles were generated and infected into HS 737.T cells. Stable integration of lentivirus was achieved through selecting culture-media plus 2 mg/ml puromycin for 48 h. The knockdown efficiency of was verified by RT-qPCR or western blot analysis. Statistical nalysis Statistics were obtained using Graphpad prism 7(GraphPad Software, San Diego, California, US). t-test, NOV, and Dunnett s and Tukey s multiple comparison test were used to evaluate the statistical significance of the differences. Results were presented as means s.e.m. of triplicate experiments. Results were considered statistically significant with P-values <.5, P-values <.1, and P-values <.1. Results Inhibited Proliferation and Survival of HS 737.T Cells Cell viability experiments demonstrated that paclitaxel was effective in inhibiting cell proliferation and survival of HS 737.T. The IC5 value of the paclitaxel-treated HS 737.T cell was 9.78 ng/ml (Fig. 1a). t the same time, our data exhibited that paclitaxel had significant time-dependent effects on the viabilities of HS 737.T cells at 6, 12, 24, 36, and 48 h, with inhibitory ratios of 19.83%, 33.23%, 43.33%, 65.33%, and 76.6%, respectively (Fig. 1b). Enhance poptosis of HS 737.T Cells Compared with the untreated cells, apoptotic cells were obviously increased after HS 737.T cells were exposed to paclitaxel at 5, 1, and 2 ng/ml for 24 h, with apoptotic ratios of 27.3%, 37.9%, and 52.16%, respectively (Fig. 1c,d). These results further revealed that paclitaxel induced cell apoptosis of HS 737.T. RN-seq and ioinformatics nalysis Totally 286 differentially expressed genes (DEG) were found by RN-seq and differentially expressed genes analysis (Pvalue <.5, fold change >2) of HS 737.T treated with paclitaxel. mong the 286 differentially expressed genes, upregulated and downregulated genes were 168 and 118, respectively (Fig. 2a); all these genes are shown in Supplementary Data 2 (upregulated genes) and 3 (downregulated genes). s shown in Fig. 2b,c, the analysis revealed enrichment of functions correlated to the top 2 significantly canonical pathways of total DEG and upregulated genes, respectively. It also revealed that apoptosis, TNF signaling pathway, TP53 regulated transcription of cell death genes pathway, and longevity regulated pathway, which was the top 2 most enriched pathway and involved in cell viability (Pvalue <.1). functional map of the upregulated gene protein protein interactions (PPI) based on significant or group analysis revealed that apoptosis, TNF signaling pathway, TP53 regulated transcription of cell death genes pathway, and death receptor signaling pathway was the important regulatory node in paclitaxel-driven apoptosis of HS 737.T cells, (the node size indicates significant enrichment), and the core components were related to apoptosis and viability of tumor cells, including TP53INPI, Caspase 1, TNFSF1, and PIK3R3 (Fig. 2d,e). Certification by Real-time Quantitative Polymerase Chain Reaction and Western lotting Our results confirmed that the 1 upregulated and 1 downregulated genes which were associated with programmed cell death or cell longevity were significantly changed (P-value <.1, fold change >2) in HS 737.T cells treated with paclitaxel, compared with the negative control, as analysis by RN-Seq demonstrated (Fig. 3a,b). These results showed that data for RN-seq and RT-qPCR were highly consistent. In addition, western blot results showed that DDIT4,, and TRIL were upregulated in HS 737.T cells compared with the negative control, and the increase was 183%, 87%, and 68%, respectively (Fig. 3c,d). Increased Cleavage of Caspase-3 and PRP1 s shown in Fig. 4, paclitaxel enhanced the cleavage of Caspase-3 and PRP1 in HS 737.T cells, and the increase was 8% and 19%, respectively. Promoted Phosphorylation Level of p53 p53 responds to various stimulus through modulation of objective genes which are involved in DN repair, apoptosis or cell cycle, and it can be activated via phosphorylation 15. Paclitaxel increased the phosphorylation level of p53 to 165% in HS 737.T cells, which implied that p53 might be involved in the paclitaxel-driven apoptosis of HS 737.T cells (Fig. 4a,b).
4 129 ORTHOPEDIC SURGERY VOLUME 11 NUMER 1 FERURY, 219 KILL GCT VI Surviving rate (%) HS 737.T Compound Log2 (ng/ml) Paclitaxe IC5 = 9.78 Vincristine IC5 = 24.5 Cell viability (fold of control) h 12h Hs 737.T 24h ng/ml paclitaxel PI PI 1 ng/ml paclitaxel 5 ng/ml paclitaxel 2 ng/ml paclitaxel poptotic and dead cells (%) * 5 ng/ml paclitaxel 1 ng/ml paclitaxel 2 ng/ml paclitaxel nnexin C D Fig. 1 Impact of paclitaxel on the viability and apoptosis of giant cell tumor of bone. (, ) Effect of paclitaxel on the viability of HS 737.T cells. (C, D) Effect of paclitaxel on the apoptosis of HS 737.T cells; all samples were espoused to various paclitaxel concentrations ( 2 ng/ml) for 12 h. (C) FITC nnexin /PI staining. (D) Each value represented the mean SD of the data from three experiments. *P <.5, P <.1, P <.1 indicated statistical significance versus negative control. Regulation of Paclitaxel-driven poptosis by RNi results showed that the expression level of was significantly decreased in HS737.T cells; the decrease was more than 7% (Fig. 5a,b). We measured the viability of paclitaxel in -knockdown cells. s expected, HS737.T cells deficient in were insensitive to paclitaxel treatment compared with empty vector. The inhibitory ratios of HS737.T cells deficient in or with empty vector were 19.88% and 4.6%, respectively (Fig. 5c). Therefore, these data illustrated that regulated paclitaxel-driven apoptosis in HS737.T cells. Discussion ccumulating evidence has indicated that paclitaxel binds to b-tubulin and increases the instability of microtubules, resulting in apoptosis in various cell lines 16,17. Repression of microtubule dynamics leads to mitotic arrest, and micronucleation and apoptosis arise in succession 18. In this study, paclitaxel inhibited the proliferation of HS 737.T cells in a dose-dependent and time-dependent manner (Fig. 1a,b). Further experiments showed that paclitaxel inhibited the proliferation of HS 737.T cells mainly via apoptosis (Fig. 1c,d).
5 13 ORTHOPEDIC SURGERY VOLUME 11 NUMER 1 FERURY, 219 KILL GCT VI down-regulated genes up-regulated genes Number of differentially expressed genes TNF signaling pathway TGF beta signaling pathway Renal cell carcinoma Pathogenic Escherichia coli infection Non small cell lung cancer Neurotrophin signaling pathway mtor signaling pathway poptosis Longevity regulating pathway Hippo signaling pathway Hedgehog signaling pathway Glycosaminoglycan biosynthesis Glioma FoxO signaling pathway Endometrial cancer EGFR tyrosine kinase inhibitor resistance Dorso ventral axis formation Chronic myeloid leukemia Central carbon metabolism in cancer 2 Oxocarboxylic acid metabolism Top 2 of Pathway Enrichment of total DEGS Rich Factor P value Gene.number Ubiquinone biosynthesis Toxoplasmosis TNF signaling pathway TGF beta signaling pathway Small cell lung cancer Regulating pluripotency of stem cells Renal cell carcinoma Prolactin signaling pathway Neurotrophin signaling pathway Measles Malaria TP53 regualtes cell death genes Longevity regulating pathway Inositol phosphate metabolism Hedgehog signaling pathway Circadian rhythm Chronic myeloid leukemia asal cell carcinoma poptosis dipocytokine signaling pathway Top 2 of Pathway Enrichment of upregulated genes RichFactor Gene.number P value C TNF signaling pathway Transcriptionalal Regulation by TP53 Small cell lung cancer Measles poptosis Death Receptor Signalling Generic Transcription Pathway Gene expression (Transcription) TP53 Regulates Transcription of Cell Death Genes poptosis asal cell carcinoma RN Polymerase II Transcription GPCR ligand binding Signal Transduction Signaling pathways regulating pluripotency of stem cells Signaling by GPCR TP53 Regulates Transcription of Genes Involved in Cytochrome C Release GE/RGE pathway Class /2 (Secretin family receptors) Longevity regulating pathway D asal cell carcinoma Colorectal cancer GE-RGE signaling pathway in diabetic complications FOXO1 Renal cell carcinoma Small cell lung cancer RPS6K5 JK2 FLCN NFKI TNF signaling pathway TGF3 CDKN2 CL3 ID2 Hippo signaling pathway WNT9 FZD5 TRF1 CSP1 TRIL SMD1 HEY1 PIK3R3 PC2 C3 TP53 Regulates Transcription of Cell Death Genes RUNX2 SMD6 RUNX2 regulates bone development Signaling pathways regulating pluripotency of stem cells TGF-beta signaling pathway poptosis Death Receptor Signalling E Fig. 2 ioinformatics analysis of differentially expressed genes in HS 737.T cell under paclitaxel treatment compared with negative control. () The diagram illustrates the differentially expressed genes among HS 737.T cell samples from RN-sequencing results. Functional annotation of the total differentially expressed genes () or the upregulated genes (C) between paclitaxel treatment and negative control. Significant changes (P-value <.5) occurred in the top 2 pathways. Colors represent P-values and dots represent the number of genes involved in each pathway. Functional map of the upregulated gene protein protein interaction (PPI) sub-network based on significant (D) or group (E) analysis. Functionally grouped network with terms as nodes linked based on their kappa score level (.3). The node size indicates significant enrichment.
6 131 ORTHOPEDIC SURGERY VOLUME 11 NUMER 1 FERURY, 219 KILL GCT VI mrn fold change partial upregulated genes 1ng/ml Paclitaxel mrn fold change partial downregulated genes 1ng/ml Paclitaxel POL3 HLHE41 DDIT4 DDIT4L HSP6 KLHL24 TGFR3 TNFIP8 TNSF1. OXTR RGS4 TRIM 29 paclitaxel (NC) 1ng/ml β-actin REG DN F CTGF DHRS9 IL1 RL1 JPH2 LYPD 1 Relative Quantity of Traget proteins 4 3 NC 1 ng/ml paclitaxel TRIL 2 * 1 DDIT4 C DDIT4 TRIL D Fig. 3 Validation of gene expression levels of partial differentially expressed genes. Verification of 1 upregulated () and downregulated () genes by quantitative real-time polymerase chain reaction. (C) Western blot analysis validated 4 upregulated genes related with apoptosis. (D) Relative protein expression of TRIL,, and DDIT4gene in (C). *P <.5, P <.1, P <.1 indicated statistical significance versus negative control. For most anticancer agents, apoptosis is thought to be a crucial mechanism that represses the proliferation of cancer cells. To further investigate the mechanisms through which paclitaxel triggered the apoptosis of HS 737.T cells, we measured the differential expression of genes using RN-Seq and analyzed them by bioinformatics assay. Paclitaxel treatment upregulated the expression of genes involved in apoptosis, TP53 regulated transcription of cell death genes, and the TNF signaling pathway, including TRIL, Caspase-1,, and DDIT4. Upon TRIL binding to its receptor DR4/DR5, it speedily triggers apoptosis through caspases activation 19. When binding with TRIL, DR4/DR5 activates Caspase-8 2 and Caspase-1. The activated caspases complex initiates Caspase-3 and leads to the death of apoptotic cells. Our results demonstrated that paclitaxel treatment promoted the expression of TRIL (TNFSF1) and Caspase-1 (Figs 2 and 3), and activated Caspase-3 (Fig. 4). Our data further demonstrated that paclitaxel-driven apoptosis was triggered by TRIL and its receptor DR4/DR5, and was dependent on Caspase-8 and Caspase-1 complex, which then resulted in the activation of downstream effector Caspase-3. ctivated Caspase-3 induces apoptosis via modulation of diverse target genes, such as DFF45, Rock1, and PRP1. However, which gene was involved in this process remained unknown. Herein, we determined the cleavage of Caspase-3 and PRP1 in paclitaxel-treated or untreated HS 737.T cells. s in Fig. 4, PRP1 cleavage was increased by treatment with 1 ng/ml paclitaxel. It has been demonstrated that PRP-1 plays a vital role in DN repair and various pathways of cell death 21,22. PRP1 is the substrate of Caspase-3, and its cleavage has been widely used as a biochemical marker of apoptosis 23. The cleavage of PRP1 was obviously raised, which suggested that paclitaxel-driven apoptosis might be via repression of DN repair. p53 is a transactivating protein containing DNbinding and transcription activation domains, and contributes to apoptosis induction mostly through its transcriptiondependent effects. It is thought to bind to a p53-binding site and to activate expression of downstream genes, which
7 132 ORTHOPEDIC SURGERY VOLUME 11 NUMER 1 FERURY, 219 KILL GCT VI 1.2 WT 1. Empty vector mrnfoldchange shrn 1 shrn 2 shrn 3.2. β -actin Fig. 4 Paclitaxel enhanced the cleavage of Caspase-3 and PRP1, and promoted the phosphorylation level of p53 in HS 737.T cells. () nalysis of the amount of cleaved Caspase-3 or PRP1, and phosphorylation level of p53 by western blot. () Density of cleavage of Caspase-3 or PRP1, and phosphorylation level of p53 normalized to that of β-actin; data from (). represses cell growth and promotes apoptosis; stabilized p53 accumulates in the nucleus and binds to specific DN sequences, leading to transactivation of several pro-apoptosis genes. lternatively, cytoplasmic p53 can induce cell death via apoptosis and act as a repressor of autophagy In the present study, the phosphorylation level of p53 was significantly increased in HS 737.T cells treated with paclitaxel (Fig. 4a,b). These results suggested that paclitaxel-driven apoptosis might be partially associated with P53. Tumor protein p53 inducible nuclear protein 1 () is an anti-proliferative and pro-apoptosis protein involved in cell stress response In response to intracellular reactive oxygen species and double-strand DN breaks, promotes p53 phosphorylation and triggers subsequent apoptosis in a caspase-dependent pattern 31,32. The expression of and the phosphorylation level of p53 were significantly increased in HS 737.T cells treated with paclitaxel (Fig. 3a,c,d). These results implied that paclitaxel-activated in the Cell viability (fold of control) ng/ml paclitaxel GCT cells was involved in triggering apoptosis and cell death. Therefore, we determined the impact of paclitaxel on the viability of -deficient HS 737 T cells. Interestingly, -deficient HS 737.T cells were relatively insensitive to paclitaxel treatment (Fig. 5c), which signaled WT Empty vector shrn Fig. 5 Tumor protein p53 inducible nuclear protein 1 () regulated paclitaxel-driven apoptosis in HS 737.T cells. RNi efficiency of in HS 737.T cells verified by quantitative real-time polymerase chain reaction () and western blot (). (C) Significant difference of cell viability among HS 737.T cells transfected with empty vector or -shrn by paclitaxel treatment. WT: wild type HS 737.T cell; empty vector: HS 737.T cells transfected with empty vector; -shrn: HS 737.T cells transfected with -shrn. *P <.5, P <.1, P <.1 indicated statistical significance versus negative control. C
8 133 ORTHOPEDIC SURGERY VOLUME 11 NUMER 1 FERURY, 219 KILL GCT VI Fig. 6 Schematic of paclitaxel drivenapoptosis in HS 737.T cells through signaling pathways. that knockdown blocked paclitaxel-induced cell death and apoptosis. The RNi-based inhibitory experiments revealed that was crucial in HS 737.T cell apoptosis driven by paclitaxel. s vital anti-tumor drugs, most chemotherapeutic agents rely on the capability to induce apoptosis of tumor cells. To further develop paclitaxel as an effective anti-gct agent in the clinic, we need to better comprehend the mechanisms through which paclitaxel drives apoptosis of GCT. ased on the results of the present study, a model of the mechanism through which paclitaxel triggers apoptosis of HS 737.T cells was proposed (Fig. 6). Our data signaled that paclitaxel activated and p53, which increased the expression of TRIL, and subsequently induced apoptosis of GCT cells. There are some limitations of this study. First, we studied the apoptosis mechanisms of paclitaxel based on only one kind of GCT cell line. Further studies could use more cell lines to investigate the commonness and mechanisms of paclitaxel-driven apoptosis of GCT. Second, we lacked data from animal experiments. Future research should consider experiments on transplanted tumors in animals. In summary, by combining transcriptomics, bioinformatics, and RNi (Lentivirus shrn), we revealed systemic transcriptomics changes in HS 737.T cells under paclitaxel treatment and the therapeutic mechanism of the treatment. Results of RN-seq and bioinformatics analysis showed that apoptosis, death receptor signaling pathway, TNF signaling pathway, and TP53 regulated transcription of cell death genes pathway, which was the top 2 most enriched pathway and involved in cell viability, were closely associated with paclitaxel in the treatment of GCT. Combined with transcriptomics and RNi, signaling pathways were ultimately found to be closely related to paclitaxel in the treatment of GCT. Our study implied that paclitaxel might be valuable for the repression of GCT. Supporting Information dditional Supporting Information may be found in the online version of this article on the publisher s web-site: Table S1 Primers speciﬁc for quantitative real-time polymerase chain reaction Table S2 shrn primers for
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Chen Accepted: et al.: February Berberine 24, Sensitizes 2015 Ovarian Cancer Cells to Cisplatin www.karger.com/cpb 956 1421-9778/15/0363-0956$39.50/0 Original Paper This is an Open Access article licensed
Li et al. Journal of Experimental & Clinical Cancer Research (2018) 37:108 https://doi.org/10.1186/s13046-018-0774-7 CORRECTION Correction to: Novel smac mimetic APG- 1387 elicits ovarian cancer cell killing
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xcelligence System Real-Time Cell Analyzer Focus Application Compound-Induced Cytotoxicity Featured Study: Using the Time Resolving Function of the xcelligence System to Optimize Endpoint Viability and
SUPPLEMENTARY INFORMATION Articles https://doi.org/10.1038/s41556-018-0174-4 In the format provided by the authors and unedited. m 6 A mrna methylation regulates AKT activity to promote the proliferation
Intracellular MHC class II molecules promote TLR-triggered innate immune responses by maintaining Btk activation Xingguang Liu, Zhenzhen Zhan, Dong Li, Li Xu, Feng Ma, Peng Zhang, Hangping Yao and Xuetao
Supplementary Materials Figure S1. MTT Cell viability assay. To measure the cytotoxic potential of the oxidative treatment, the MTT [3-(4,5-dimethylthiazol- 2-yl)-2,5-diphenyl tetrazolium bromide] assay
www.sciencesignaling.org/cgi/content/full/8/364/ra18/dc1 Supplementary Materials for The tyrosine phosphatase (Pez) inhibits metastasis by altering protein trafficking Leila Belle, Naveid Ali, Ana Lonic,
Xu et al. Molecular Cancer (2019) 18:8 https://doi.org/10.1186/s12943-018-0932-8 LETTER TO THE EDITOR RNA-Seq profiling of circular RNAs in human colorectal Cancer liver metastasis and the potential biomarkers
Supplementary Figure 1 Expression of apoptosis-related genes in tumor T reg cells. (a) Identification of FOXP3 T reg cells by FACS. CD45 + cells were gated as enriched lymphoid cell populations with low-granularity.
Supplemental Data TGF-β-mediated mir-181a expression promotes breast cancer metastasis by targeting Bim. Molly A. Taylor 1, Khalid Sossey-Alaoui 2, Cheryl L. Thompson 3, David Danielpour 4, and William
Wang et al. Journal of Hematology & Oncology (2016) 9:90 DOI 10.1186/s13045-016-0323-9 RESEARCH Bmi-1 regulates stem cell-like properties of gastric cancer cells via modulating mirnas Open Access Xiaofeng
Silva et al. PTEN posttranslational inactivation and hyperactivation of the PI3K/Akt pathway sustain primary T cell leukemia viability Supplementary Table; Supplementary Figures and legends S1-S21; Supplementary
EXPERIMENTL ND THERPEUTIC MEDICINE 7: 1767-1771, 2014 JW regulates human esophageal squamous cell carcinoma and human esophageal cells through different mitogen activated protein kinase signaling pathways
www.sciencesignaling.org/cgi/content/full/9/439/ra78/dc1 Supplementary Materials for Small heterodimer partner mediates liver X receptor (LXR) dependent suppression of inflammatory signaling by promoting
Supplementary information for: Pharmacologic inhibition of histone demethylation as a therapy for pediatric brainstem glioma Rintaro Hashizume 1, Noemi Andor 2, Yuichiro Ihara 2, Robin Lerner 2, Haiyun
PUMA gene transfection can enhance the sensitivity of epirubicin-induced apoptosis of MCF-7 breast cancer cells C.-G. Sun 1 *, J. Zhuang 1 *, W.-J. Teng 1, Z. Wang 2 and S.-S. Du 3 1 Department of Oncology,
AD Award Number: W81XWH-14-1-0505 TITLE: Targeting the Neural Microenvironment in Prostate Cancer PRINCIPAL INVESTIGATOR: Michael Ittmann MD PhD CONTRACTING ORGANIZATION: BAYLOR COLLEGE OF MEDICINE HOUSTON,
SUPPLEMENTARY FIGURES AND TABLE Supplementary Figure S1: Characterization of IRE1α mutants. A. U87-LUC cells were transduced with the lentiviral vector containing the GFP sequence (U87-LUC Tet-ON GFP).
number 19 Done by Waseem Abo-Obeida Corrected by Abdullah Zreiqat Doctor Maha Shomaf Carcinogenesis: the molecular basis of cancer. Non-lethal genetic damage lies at the heart of carcinogenesis and leads
7th International Conference on Education, Management, Computer and Medicine (EMCM 2016) Expression of Beta-Adrenergic Receptor in Glioma LN229 Cells and Its Effect on Cell Proliferation Ping Wang1, Qingluan
Supplementary Figure 1. Normal T lymphocyte populations in Dapk -/- mice. (a) Normal thymic development in Dapk -/- mice. Thymocytes from WT and Dapk -/- mice were stained for expression of CD4 and CD8.
Supplementary Figure 1. A. Bar graph representing the expression levels of the 19 indicated genes in the microarrays analyses comparing human lung immortalized broncho-epithelial cells (AALE cells) expressing
Supplementary Figure 1 6 HE-50 HE-116 E-1 HE-108 Supplementary Figure 1. Targeted drug response curves of endometrial cancer cells. Endometrial cancer cell lines were incubated with serial dilutions of
Supplementary Figure 1. Confocal immunofluorescence showing mitochondrial translocation of Drp1. Cardiomyocytes treated with H 2 O 2 were prestained with MitoTracker (red), then were immunostained with
Supplementary Figure 1.TRIM33 binds β-catenin in the nucleus. a & b, Co-IP of endogenous TRIM33 with β-catenin in HT-29 cells (a) and HEK 293T cells (b). TRIM33 was immunoprecipitated, and the amount of
MATERIALS AND METHODS Study population Blood samples were obtained from 15 patients with AS fulfilling the modified New York criteria, 6 RA patients and 10 age- and gender-matched healthy controls (HCs).
European Review for Medical and Pharmacological Sciences Sodium selenite induces apoptosis in colon cancer cells via Bax-dependent mitochondrial pathway Z. LI 1,2, J. MENG 3, T.-J. XU 4, X.-Y. QIN 5, X.-D.
Supplemental Methods Cells and reagents. Synaptopodin knockdown (1) and dynamin knockdown (2) podocytes were cultured as described previously. Staurosporine, angiotensin II and actinomycin D were all obtained
Supplementary Information Supplementary Figures Supplementary Figure 1. a) List of KMTs targeted in the shrna screen. The official symbol, KMT designation, gene ID and specifities are provided. Those highlighted
Type of file: PDF Size of file: 0 KB Title of file for HTML: Supplementary Information Description: Supplementary Figures Supplementary Figure 1 mir-128-3p is highly expressed in chemoresistant, metastatic
KRas;At KRas;At KRas;At KRas;At a b Supplementary Figure 1. Gene set enrichment analyses. (a) GO gene sets (MSigDB v3. c5) enriched in KRas;Atg5 fl/+ as compared to KRas;Atg5 fl/fl tumors using gene set
The effect of insulin on chemotherapeutic drug sensitivity in human esophageal and lung cancer cells Published in: Natl Med J China, February 10, 2003; Vol 83, No 3, Page 195-197. Authors: JIAO Shun-Chang,
Questions about cancer What is cancer? Cancer Gil McVean, Department of Statistics, Oxford What causes unregulated cell growth? What regulates cell growth? What causes DNA damage? What are the steps in
Cell Quality Control Peter Takizawa Department of Cell Biology Cellular quality control reduces production of defective proteins. Cells have many quality control systems to ensure that cell does not build
Supplementary Figure 1 EGFR inhibition activates signaling pathways (a-b) EGFR inhibition activates signaling pathways (a) U251EGFR cells were treated with erlotinib (1µM) for the indicated times followed
Original rticle inhibits proliferation and motility of the gastric cancer SGC-791 cell line via targeting KT-mediated signal pathway iao Chen*, Jun-Jian Deng*, Wei Ge, Yong-Fa Zheng, De-Dong Cao, Ximing
Cancer The fundamental defect is unregulated cell division. Properties of Cancerous Cells Altered growth and proliferation Loss of growth factor dependence Loss of contact inhibition Immortalization Alterated
Pro-apoptotic signalling through Toll-like receptor 3 involves TRIF-dependent activation of caspase-8 and is under the control of inhibitor of apoptosis proteins in melanoma cells Arnim Weber, Zofia Kirejczyk,
Copyright WILEY-VCH Verlag GmbH & Co. KGaA, 69469 Weinheim, Germany, 212. Supporting Information for Adv. Funct. Mater., DOI:.2/adfm.2122233 MnO Nanocrystals: A Platform for Integration of MRI and Genuine
Signal Transduction - Part 2 Key Concepts - Receptor tyrosine kinases control cell metabolism and proliferation Growth factor signaling through Ras Mutated cell signaling genes in cancer cells are called
SUPPLEMENTARY INFORMATION Materials and Methods Human cell lines and culture conditions HCC1937 is the HCC1937-pcDNA3 cell line, which was derived from a breast cancer with a mutation in exon 20 of BRCA1
Interactions between innate immunity & adaptive immunity What happens to T cells after they leave the thymus? Naïve T cells exit the thymus and enter the bloodstream. If they remain in the bloodstream,
Interactions between innate immunity & adaptive immunity What happens to T cells after they leave the thymus? Naïve T cells exit the thymus and enter the bloodstream. If they remain in the bloodstream,
Supplementary Figure 1: (A) Whole aortic cross-sections stained with Hematoxylin and Eosin (H&E), 7 days after porcine-pancreatic-elastase (PPE)-induced AAA compared to untreated, healthy control aortas
CHAPTER VII CONCLUDING REMARKS AND FUTURE DIRECTION Stathmin in Prostate Cancer Development and Progression Androgen deprivation therapy is the most used treatment of de novo or recurrent metastatic PCa.
Apoptosis Mediated Cytotoxicity of Curcumin Analogues PGV-0 and PGV-1 in WiDr Cell Line Endah Puji Septisetyani, Muthi Ikawati, Barinta Widaryanti and Edy Meiyanto* ) Cancer Chemoprevention Research Center,
Neoplasia 18 lecture 6 Dr Heyam Awad MD, FRCPath ILOS 1. understand the role of TGF beta, contact inhibition and APC in tumorigenesis. 2. implement the above knowledge in understanding histopathology reports.
THESIS BOOK The functional investigation of the interaction between TATA-associated factor 3 (TAF3) and p53 protein Orsolya Buzás-Bereczki Supervisors: Dr. Éva Bálint Dr. Imre Miklós Boros University of
The death receptors: signaling and modulation 1 1 The extrinsic cell death pathway 2 Nat Rev Drug Discov. 2008 Dec;7(12):1001-12. 2 Death receptors Belong to the tumor necrosis factor (TNF) receptor gene
Low levels of serum mir-99a is a predictor of poor prognosis in breast cancer J. Li 1, Z.J. Song 2, Y.Y. Wang 1, Y. Yin 1, Y. Liu 1 and X. Nan 1 1 Tumor Research Department, Shaanxi Provincial Tumor Hospital,
Title: Smooth muscle cell-specific Tgfbr1 deficiency promotes aortic aneurysm formation by stimulating multiple signaling events Pu Yang 1, 3, radley M. Schmit 1, Chunhua Fu 1, Kenneth DeSart 1, S. Paul
Shao-Ming Shen et al Role of I in MT of cancers MO reports xpanded View igures igure V1. nalysis of the expression of I isoforms in cancer cells and their interaction with PTN. RT PR detection of Ish and
Supplemental Data Integrating omics and alternative splicing i reveals insights i into grape response to high temperature Jianfu Jiang 1, Xinna Liu 1, Guotian Liu, Chonghuih Liu*, Shaohuah Li*, and Lijun
Supplementary Information Induction of p53-independent apoptosis by ectopic expression of in human liposarcomas Dhong Hyun Lee 1, *, Charles Forscher 1, Dolores Di Vizio 2, 3, and H. Phillip Koeffler 1,
Deegan S, Saveljeva S, Logue SE, Pakos-Zebrucka K, Gupta S, Vandenabeele P, Bertrand MJ,Samali A. (2014) Deficiency in the mitochondrial apoptotic pathway reveals the toxic potential of autophagy under
Synthesis and Biological Evaluation of Protein Kinase D Inhibitors Celeste Alverez Topic Seminar October 26, 2013 Celeste Alverez @ Wipf Group 10/26/2013 1 Protein Kinase D (PKD) A novel family of serine/threonine
1 2 Supporting Information 3 4 5 FADD regulates NF-кB activation and promotes ubiquitination of cflip L to induce apoptosis 6 7 Kishu Ranjan and Chandramani Pathak* 8 9 Department of Cell Biology, School