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1 Thursday, October 16 th Good morning. Those of you needing to take the Enzymes and Energy Quiz will start very soon. Students who took the quiz Wednesday: Please QUIETLY work on the chapter 6 reading guide. You may also work on Q#1-2 on your gold Unit 2 Homework packet, Chapter 6.

2 Tour of the Cell

3 Overview: The Fundamental Units of Life The cell theory includes these statements: All organisms are made of cells The cell is the simplest collection of matter that can live Cell structure and cell function are related All cells come from earlier cells Copyright 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

4 To study cells, biologists use microscopes and the tools of biochemistry Microscopes are used to see cells and the complex details of cells invisible to the unaided eye Light microscope is the simplest In a light microscope (LM), visible light passes through a specimen and then through glass lenses, magnifying the image Copyright 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

5 The quality of an image depends on Magnification- ratio of an object s image size to its real size Resolution- measure of the image s clarity, or the minimum distance between two distinguishable points Contrast- visible differences in parts of the sample Copyright 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

6 Fig. 6-2 Unaided eye Light microscope Electron microscope 10 m Limitations of the light and electron microscopes 1 m 0.1 m 1 cm 1 mm 100 µm Human height Length of some nerve and muscle cells Chicken egg Frog egg 10 µm Most plant and animal cells Nucleus Most bacteria 1 µm Mitochondrion 100 nm Smallest bacteria Viruses 10 nm Ribosomes Proteins 1 nm Lipids Small molecules 0.1 nm Atoms

7 LM s effectively magnify a specimen s image to about 1,000 times its actual size. Various techniques increase contrast and help cell components to be stained or labeled Most subcellular structures, including organelles (membrane-enclosed compartments), are too small to be resolved by an LM Copyright 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

8 TECHNIQUE RESULTS TECHNIQUE RESULTS (a) Brightfield (unstained specimen) (e) Fluorescence 100 µm (b) Brightfield (stained specimen) (f) Confocal (c) Phase-contrast (d) Differentialinterferencecontrast (Nomarski) Fig µm

9 Electron microscopes (EMs) are used to study subcellular structures Scanning electron microscopes (SEMs) focus a beam of electrons onto the surface of a specimen, giving images that look 3-D Transmission electron microscopes (TEMs) focus a beam of electrons through a specimen to study the internal structure of cells Copyright 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

10 Fig. 6-4 TECHNIQUE RESULTS (a) Scanning electron microscopy (SEM) Cilia 1 µm (b) Transmission electron microscopy (TEM) Longitudinal section of cilium Cross section of cilium 1 µm

11 Cell Fractionation Cell fractionation breaks cells and separates major organelles from each other using ultracentrifuges This lets scientists determine the functions of organelles Biochemistry and cytology help correlate cell function with structure Copyright 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

12 Fig. 6-5b TECHNIQUE (cont.) 1,000 g (1,000 times the force of gravity) 10 min Supernatant poured into next tube 20,000 g 20 min Pellet rich in nuclei and cellular debris Pellet rich in mitochondria (and chloroplasts if cells are from a plant) 80,000 g 60 min Pellet rich in microsomes (pieces of plasma membranes and cells internal membranes) 150,000 g 3 hr Pellet rich in ribosomes

13 To be eukaryotic or not to be All cells are either prokaryotic or eukaryotic cells Bacteria & Archaeabacteria are prokaryotic cells Protists, fungi, animals, and plants are eukaryotic cells Basic features of all cells: Plasma membrane Semifluid substance called cytosol Chromosomes (carry genes) Ribosomes (make proteins) Copyright 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

14 Types of cells Prokaryote bacteria cells - no organelles - organelles Eukaryote animal cells Eukaryote plant cells

15 Why organelles? Specialized structures specialized functions cilia or flagella for locomotion Containers partition cell into compartments create different local environments separate ph, or concentration of materials distinct & incompatible functions lysosome & its digestive enzymes Membranes as sites for chemical reactions unique combinations of lipids & proteins embedded enzymes & reaction centers chloroplasts & mitochondria mitochondria chloroplast Golgi ER

16 Cells gotta work to live! What jobs do cells have to do? make proteins proteins control every cell function make energy for daily life for growth make more cells growth repair renewal

17 Building Proteins

18 Proteins do all the work! proteins DNA organism cells Repeat after me Proteins do all the work!

19 Cells functions Building proteins read DNA instructions build proteins process proteins folding modifying removing amino acids adding other molecules e.g, making glycoproteins for cell membrane address & transport proteins

20 Building Proteins Organelles involved nucleus ribosomes endoplasmic reticulum (ER) Golgi apparatus vesicles The Protein Assembly Line nucleus ribosome ER Golgi apparatus vesicles

21 Nucleus Function protects DNA Structure nuclear envelope double membrane nuclear pores nucleolus DNA histone protein membrane fused in spots to create pores allows large macromolecules to pass through What kind of molecules need to pass through? chromosome nuclear pore nuclear envelope

22 1 nuclear membrane DNA production of mrna from DNA in nucleus Nucleus mrna mrna travels from nucleus to ribosome in cytoplasm through nuclear pore 2 nuclear pore mrna small ribosomal subunit large ribosomal subunit cytoplasm

23

24 Nucleolus Function ribosome production build ribosome subunits from rrna & proteins exit through nuclear pores to cytoplasm & combine to form functional ribosomes large subunit small subunit rrna & proteins ribosome nucleolus

25 Ribosomes Function protein production Structure rrna & protein 2 subunits combine Ribosomes Rough ER large subunit small subunit 0.08mm Smooth ER

26 Types of Ribosomes Free ribosomes suspended in cytosol synthesize proteins that function in cytosol Bound ribosomes attached to endoplasmic reticulum synthesize proteins for export or for membranes membrane proteins

27 Endoplasmic Reticulum Function processes proteins manufactures membranes synthesis & hydrolysis of many compounds Structure membrane connected to nuclear envelope & extends throughout cell

28 Types of ER rough smooth

29 Smooth ER function Membrane production Many metabolic processes synthesis synthesize lipids oils, phospholipids, steroids & sex hormones hydrolysis hydrolyze glycogen into glucose in liver detoxify drugs & poisons in liver ex. alcohol & barbiturates

30 Membrane Factory Build new membrane synthesize phospholipids builds membranes ER membrane expands bud off & transfer to other parts of cell that need membranes

31 Rough ER function Produce proteins for export out of cell protein secreting cells packaged into transport vesicles for export Which cells have lot of rough ER?

32 Synthesizing proteins cisternal space polypeptide signal sequence mrna ribosome ribosome membrane of endoplasmic reticulum cytoplasm

33 Golgi Apparatus Function Which cells have lots of Golgi? finishes, sorts, tags & ships cell products like UPS shipping department ships products in vesicles membrane sacs UPS trucks secretory vesicles transport vesicles

34 Golgi Apparatus

35 Vesicle transport protein vesicle budding from rough ER migrating transport vesicle fusion of vesicle with Golgi apparatus ribosome

36 nucleus DNA endoplasmic reticulum protein on its way! TO: RNA vesicle TO: ribosomes TO: vesicle Making Proteins Regents Biology protein Golgi apparatus TO: finished protein

37 Putting it together nucleus nuclear pore cell membrane rough ER Making proteins protein secreted ribosome vesicle proteins smooth ER cytoplasm transport vesicle Golgi apparatus

38

39

40 Any Questions!!

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