Cellular Neurobiology BIPN140

Size: px
Start display at page:

Download "Cellular Neurobiology BIPN140"

Transcription

1 Cellular Neurobiology BIPN140 1st Midterm Exam Ready for Pickup By the elevator on the 3 rd Floor of Pacific Hall (waiver) Exam Depot Window at the north entrance to Pacific Hall (no waiver) Mon-Fri, 10:00 AM to 4:00 PM 1 st midterm regrade: contact the IA who graded the question before Nov 14, Study Group? If you are interested in studying with other students, please stay after the lecture today. PS5 Q&A, PS4~7 and Midterm 2 from FA15 are posted. Chih-Ying s Office Hour: Monday, 1:00-2:00 PM, Bonner Hall 4146 BIPN140 Lecture 12: Synaptic Plasticity (II) 1. Early v.s. Late LTP 2. Long-Term Depression 3. Molecular Mechanisms of Long-Term Depression: NMDA-R dependent 4. Molecular Mechanisms of Long-Term Depression: NMDA-R independent (cerebellar LTD) Su (FA16)

2 Mechanism II: Ca 2+ influx is Required for LTP (Fig. 8.13) Early phase of LTP (first hour or two) Dynamic AMPA-R Trafficking During Synaptic Plasticity Huganir & Nicoll, Neuron 80, , 2013

3 Scaffolding and Trafficking Proteins for AMPA-Rs Huganir & Nicoll, Neuron 80, , 2013 AMPA-R Phosphorylation and its Trafficking Song & Huganir, TRENDS in Neuroscience 25, , 2002

4 Role of Protein Synthesis in Maintaining LTP (Fig. 8.14) Mechanisms Responsible for Long-lasting Changes in Synaptic Transmission during LTP (Fig. 8.15) LTP-induced structural changes CA1 pyramidal neurons

5 Synaptic Tagging & Late LTP Long-term Synaptic Depression in the Hippocampus (Fig. 8.16) Low frequency stimulus (e.g. 1 Hz for mins)

6 Synaptic Efficacy Can Be Regulated Bidirectionally TBS: Theta burst stimulation, high frequency tetanus to induce LTP LFS: Low frequency stimulation for 15 minutes to induce LTD. LFS can eliminate LTP (or induce LTD) as short as 30 minutes after TBS (LTP induction). Synaptic efficacy can be dynamically tuned up or down (AMPA-R trafficking in and out of synapses). Dudek & Bear, J Neuroscience 13, , 1993 Spike-timing Dependent Synaptic Plasticity (STDP) (Fig. 8.18) Action potential superimposed on EPSP LTD LTP The precise temporal relationship between activity in the pre- and post-synaptic neurons is also an important determinant of LTP/LTD.

7 Cerebellar LTD (Fig. 8.17) (smaller EPSPs) (strong excitatory input) Form inhibitory synapses onto cerebellar output neurons (DCN) Cerebellar LTD: Mechanism Climbing Fiber Voltage-Gated Ca2+ Channel Ca2+ AMPA Receptor Phosphorylation Internalization LTD Parallel Fiber IP3 mglur1=> PLC DAG PIP2 Ca2+ PKC

8 Background: Long-term modification of synaptic strength (LTP & LTD) has long been postulated to encode memory. However, the causal link between LTP/LTD and memory has been difficult to demonstrate. Experiments: Using fear conditioning (a type of associative memory) as a paradigm to study the impact of optogenetically induced LTP & LTD on fear memory. Expressing channelrhodopsin2 (ChR2, a light-gated non-selective ion channel, optogenetic approach) in the neurons in the auditory cortex that project to amygdala (fear center in the brain). (1) Using light to induce LTD after fear conditioning. (2) Using light to induce LTP subsequently to determine its impact on fear memory. Results: Optogenetic delivery of LTD conditioning to the auditory input inactivates memory of the foot shock. Conversely, subsequent optogenetic delivery of LTP conditioning to the auditory input reactivates memory of the shock. Thus, the authors engineered inactivation and reactivation of a memory using LTD and LTP, which supports a causal link between these forms of synaptic plasticity and memory.

9 Fig. 1. Fear conditioning with tone or optogenetics. US: unconditioned stimulus, foot shock 10 Hz light flashes Lateral amygdala 1. Animals are trained to press a lever in response to CS (conditioned stimulus, tone or optogenetically driven input, ODI). 2. When animals experience fear, they freeze and stop pressing the lever. +40 mv 0 mv -60 mv 1. Neurons expressing ChR2 respond to blue flashes faithfully with action potential (up to 100 Hz). 2. Provides a means to induce LTD or LTD in vivo in behaving animals. Fig. 2. LTD inactivates and LTP reactivates memory (1 Hz x 900 pulses) (100 Hz x 100 pulses x 5)

10 Fig. 4. In vivo electrophysiological responses to 10 Hz (baseline), LTD and LTP protocols. Head fixed, anaesthetized animals, extracellular field recording (field EPSP slope) (optical conditioned stimulus) Results: Optogenetic delivery of LTD conditioning to the auditory input inactivates memory of the foot shock. Conversely, subsequent optogenetic delivery of LTP conditioning to the auditory input reactivates memory of the shock. Thus, the authors engineered inactivation and reactivation of a memory using LTD and LTP, which supports a causal link between these forms of synaptic plasticity and memory.

BIPN140 Lecture 12: Synaptic Plasticity (II)

BIPN140 Lecture 12: Synaptic Plasticity (II) BIPN140 Lecture 12: Synaptic Plasticity (II) 1. Early v.s. Late LTP 2. Long-Term Depression 3. Molecular Mechanisms of Long-Term Depression: NMDA-R dependent 4. Molecular Mechanisms of Long-Term Depression:

More information

Cellular Neurobiology BIPN140

Cellular Neurobiology BIPN140 Cellular Neurobiology BIPN140 1st Midterm Exam Ready for Pickup By the elevator on the 3 rd Floor of Pacific Hall (waiver) Exam Depot Window at the north entrance to Pacific Hall (no waiver) Mon-Fri, 10:00

More information

Cellular Neurobiology / BIPN 140

Cellular Neurobiology / BIPN 140 SECOND MIDTERM EXAMINATION Fall, 2015 GENERAL INSTRUCTIONS 1. Please write your name on ALL 6 pages. 2. Please answer each question IN THE SPACE ALLOTTED. 1) /10 pts 2) /10 pts 3) /15 pts 4) /15 pts 5)

More information

BIPN 140 Problem Set 6

BIPN 140 Problem Set 6 BIPN 140 Problem Set 6 1) The hippocampus is a cortical structure in the medial portion of the temporal lobe (medial temporal lobe in primates. a) What is the main function of the hippocampus? The hippocampus

More information

BIPN 140 Problem Set 6

BIPN 140 Problem Set 6 BIPN 140 Problem Set 6 1) Hippocampus is a cortical structure in the medial portion of the temporal lobe (medial temporal lobe in primates. a) What is the main function of the hippocampus? The hippocampus

More information

Synaptic Plasticity and the NMDA Receptor

Synaptic Plasticity and the NMDA Receptor Synaptic Plasticity and the NMDA Receptor Lecture 4.2 David S. Touretzky November, 2015 Long Term Synaptic Plasticity Long Term Potentiation (LTP) Reversal of LTP Long Term Depression (LTD) Reversal of

More information

Synaptic plasticityhippocampus. Neur 8790 Topics in Neuroscience: Neuroplasticity. Outline. Synaptic plasticity hypothesis

Synaptic plasticityhippocampus. Neur 8790 Topics in Neuroscience: Neuroplasticity. Outline. Synaptic plasticity hypothesis Synaptic plasticityhippocampus Neur 8790 Topics in Neuroscience: Neuroplasticity Outline Synaptic plasticity hypothesis Long term potentiation in the hippocampus How it s measured What it looks like Mechanisms

More information

Part 11: Mechanisms of Learning

Part 11: Mechanisms of Learning Neurophysiology and Information: Theory of Brain Function Christopher Fiorillo BiS 527, Spring 2012 042 350 4326, fiorillo@kaist.ac.kr Part 11: Mechanisms of Learning Reading: Bear, Connors, and Paradiso,

More information

Synaptic Plasticity and Memory

Synaptic Plasticity and Memory Synaptic Plasticity and Memory Properties and synaptic mechanisms underlying the induction of long-term potentiation (LTP) The role of calcium/calmodulin-dependent kinase II (CamKII) in the induction,

More information

Cellular mechanisms of information transfer: neuronal and synaptic plasticity

Cellular mechanisms of information transfer: neuronal and synaptic plasticity Cellular mechanisms of information transfer: neuronal and synaptic plasticity Ivan Pavlov (UCL Institute of Neurology, UK) Anton Chizhov (Ioffe Physical Technical Institute) Pavel Zykin (St.-Petersburg

More information

CSE 599E Lecture 2: Basic Neuroscience

CSE 599E Lecture 2: Basic Neuroscience CSE 599E Lecture 2: Basic Neuroscience 1 Today s Roadmap The neuron doctrine (or dogma) Neuronal signaling The electrochemical dance of ions Action Potentials (= spikes) Synapses and Synaptic Plasticity

More information

Cellular Neurobiology BIPN140

Cellular Neurobiology BIPN140 Cellular Neurobiology BIPN140 Second midterm is next Tuesday!! Covers lectures 7-12 (Synaptic transmission, NT & receptors, intracellular signaling & synaptic plasticity). Review session is on Monday (Nov

More information

Memory Systems II How Stored: Engram and LTP. Reading: BCP Chapter 25

Memory Systems II How Stored: Engram and LTP. Reading: BCP Chapter 25 Memory Systems II How Stored: Engram and LTP Reading: BCP Chapter 25 Memory Systems Learning is the acquisition of new knowledge or skills. Memory is the retention of learned information. Many different

More information

Basics of Computational Neuroscience: Neurons and Synapses to Networks

Basics of Computational Neuroscience: Neurons and Synapses to Networks Basics of Computational Neuroscience: Neurons and Synapses to Networks Bruce Graham Mathematics School of Natural Sciences University of Stirling Scotland, U.K. Useful Book Authors: David Sterratt, Bruce

More information

Beyond Vanilla LTP. Spike-timing-dependent-plasticity or STDP

Beyond Vanilla LTP. Spike-timing-dependent-plasticity or STDP Beyond Vanilla LTP Spike-timing-dependent-plasticity or STDP Hebbian learning rule asn W MN,aSN MN Δw ij = μ x j (v i - φ) learning threshold under which LTD can occur Stimulation electrode Recording electrode

More information

The Neurobiology of Learning and Memory

The Neurobiology of Learning and Memory The Neurobiology of Learning and Memory JERRY W. RUDY University of Colorado, Boulder Sinauer Associates, Inc. Publishers Sunderland, Massachusetts 01375 Table of Contents CHAPTER 1 Introduction: Fundamental

More information

Cell Responses in V4 Sparse Distributed Representation

Cell Responses in V4 Sparse Distributed Representation Part 4B: Real Neurons Functions of Layers Input layer 4 from sensation or other areas 3. Neocortical Dynamics Hidden layers 2 & 3 Output layers 5 & 6 to motor systems or other areas 1 2 Hierarchical Categorical

More information

SUPPLEMENTARY INFORMATION. Supplementary Figure 1

SUPPLEMENTARY INFORMATION. Supplementary Figure 1 SUPPLEMENTARY INFORMATION Supplementary Figure 1 The supralinear events evoked in CA3 pyramidal cells fulfill the criteria for NMDA spikes, exhibiting a threshold, sensitivity to NMDAR blockade, and all-or-none

More information

MCB MIDTERM EXAM #1 MONDAY MARCH 3, 2008 ANSWER KEY

MCB MIDTERM EXAM #1 MONDAY MARCH 3, 2008 ANSWER KEY MCB 160 - MIDTERM EXAM #1 MONDAY MARCH 3, 2008 ANSWER KEY Name ID# Instructions: -Only tests written in pen will be regarded -Please submit a written request indicating where and why you deserve more points

More information

A Model of Spike-Timing Dependent Plasticity: One or Two Coincidence Detectors?

A Model of Spike-Timing Dependent Plasticity: One or Two Coincidence Detectors? RAPID COMMUNICATION J Neurophysiol 88: 507 513, 2002; 10.1152/jn.00909.2001. A Model of Spike-Timing Dependent Plasticity: One or Two Coincidence Detectors? UMA R. KARMARKAR AND DEAN V. BUONOMANO Departments

More information

Neuromorphic computing

Neuromorphic computing Neuromorphic computing Robotics M.Sc. programme in Computer Science lorenzo.vannucci@santannapisa.it April 19th, 2018 Outline 1. Introduction 2. Fundamentals of neuroscience 3. Simulating the brain 4.

More information

Welcome to CSE/NEUBEH 528: Computational Neuroscience

Welcome to CSE/NEUBEH 528: Computational Neuroscience Welcome to CSE/NEUBEH 528: Computational Neuroscience Instructors: Rajesh Rao (rao@cs) Adrienne Fairhall (fairhall@u) TA: Yanping Huang (huangyp@u) 1 Today s Agenda Introduction: Who are we? Course Info

More information

Synapses and synaptic plasticity. Lubica Benuskova Lecture 8 How neurons communicate How do we learn and remember

Synapses and synaptic plasticity. Lubica Benuskova Lecture 8 How neurons communicate How do we learn and remember Synapses and synaptic plasticity Lubica Benuskova Lecture 8 How neurons communicate How do we learn and remember 1 Brain is comprised of networks of neurons connected and communicating via synapses ~10

More information

Shadowing and Blocking as Learning Interference Models

Shadowing and Blocking as Learning Interference Models Shadowing and Blocking as Learning Interference Models Espoir Kyubwa Dilip Sunder Raj Department of Bioengineering Department of Neuroscience University of California San Diego University of California

More information

VS : Systemische Physiologie - Animalische Physiologie für Bioinformatiker. Neuronenmodelle III. Modelle synaptischer Kurz- und Langzeitplastizität

VS : Systemische Physiologie - Animalische Physiologie für Bioinformatiker. Neuronenmodelle III. Modelle synaptischer Kurz- und Langzeitplastizität Bachelor Program Bioinformatics, FU Berlin VS : Systemische Physiologie - Animalische Physiologie für Bioinformatiker Synaptische Übertragung Neuronenmodelle III Modelle synaptischer Kurz- und Langzeitplastizität

More information

Synaptic plasticity. Activity-dependent changes in synaptic strength. Changes in innervation patterns. New synapses or deterioration of synapses.

Synaptic plasticity. Activity-dependent changes in synaptic strength. Changes in innervation patterns. New synapses or deterioration of synapses. Synaptic plasticity Activity-dependent changes in synaptic strength. Changes in innervation patterns. New synapses or deterioration of synapses. Repair/changes in the nervous system after damage. MRC Centre

More information

Bidirectional NMDA receptor plasticity controls CA3 output and heterosynaptic metaplasticity

Bidirectional NMDA receptor plasticity controls CA3 output and heterosynaptic metaplasticity Bidirectional NMDA receptor plasticity controls CA output and heterosynaptic metaplasticity David L. Hunt, Nagore Puente, Pedro Grandes, Pablo E. Castillo a NMDAR EPSC (pa) - - -8-6 -4 - st 5 nd 5 b NMDAR

More information

1) Drop off in the Bi 150 box outside Baxter 331 or to the head TA (jcolas).

1) Drop off in the Bi 150 box outside Baxter 331 or  to the head TA (jcolas). Bi/CNS/NB 150 Problem Set 3 Due: Tuesday, Oct. 27, at 4:30 pm Instructions: 1) Drop off in the Bi 150 box outside Baxter 331 or e-mail to the head TA (jcolas). 2) Submit with this cover page. 3) Use a

More information

Welcome to CSE/NEUBEH 528: Computational Neuroscience

Welcome to CSE/NEUBEH 528: Computational Neuroscience Welcome to CSE/NEUBEH 528: Computational Neuroscience Instructors: Rajesh Rao (rao@cs.uw) Adrienne Fairhall (fairhall@uw) TA: Rich Pang (rpang@uw) 1 Today s Agenda F Course Info and Logistics F Motivation

More information

Basal Ganglia Anatomy, Physiology, and Function. NS201c

Basal Ganglia Anatomy, Physiology, and Function. NS201c Basal Ganglia Anatomy, Physiology, and Function NS201c Human Basal Ganglia Anatomy Basal Ganglia Circuits: The Classical Model of Direct and Indirect Pathway Function Motor Cortex Premotor Cortex + Glutamate

More information

What do you notice? Edited from

What do you notice? Edited from What do you notice? Edited from https://www.youtube.com/watch?v=ffayobzdtc8&t=83s How can a one brain region increase the likelihood of eliciting a spike in another brain region? Communication through

More information

CSE 599E Lecture 2: Neurobiology 101

CSE 599E Lecture 2: Neurobiology 101 CSE 599E Lecture 2: Neurobiology 101 Image from http://clasdean.la.asu.edu/news/images/ubep2001/neuron3.jpg 1 Some slides adapted from: http://www.yorku.ca/deniseh/courses/arm%20movements.ppt Today s Roadmap

More information

Lecture 22: A little Neurobiology

Lecture 22: A little Neurobiology BIO 5099: Molecular Biology for Computer Scientists (et al) Lecture 22: A little Neurobiology http://compbio.uchsc.edu/hunter/bio5099 Larry.Hunter@uchsc.edu Nervous system development Part of the ectoderm

More information

Behavioral Neuroscience: Fear thou not. Rony Paz

Behavioral Neuroscience: Fear thou not. Rony Paz Behavioral Neuroscience: Fear thou not Rony Paz Rony.paz@weizmann.ac.il Thoughts What is a reward? Learning is best motivated by threats to survival? Threats are much better reinforcers? Fear is a prime

More information

How Synapses Integrate Information and Change

How Synapses Integrate Information and Change How Synapses Integrate Information and Change Rachel Stewart class of 2016 http://neuroscience.uth.tmc.edu/s1/chapter06.html http://neuroscience.uth.tmc.edu/s1/chapter07.html Chris Cohan, Ph.D. Dept. of

More information

Bidirectional modifications in synaptic efficacy, exemplified

Bidirectional modifications in synaptic efficacy, exemplified Capture of a protein synthesis-dependent component of long-term depression Beth S. Kauderer* and Eric R. Kandel* Howard Hughes Medical Institute and *Center for Neurobiology and Behavior, College of Physicians

More information

NS200: In vitro electrophysiology section September 11th, 2013

NS200: In vitro electrophysiology section September 11th, 2013 NS200: In vitro electrophysiology section September 11th, 2013 Quynh Anh Nguyen, 4 th Year Nicoll Lab quynhanh.nguyen@ucsf.edu N276 Genentech Hall, Mission Bay Outline Part I: Theory Review of circuit

More information

DOMINIQUE DEBANNE*, BEAT H. GÄHWILER, AND SCOTT M. THOMPSON MATERIALS AND METHODS

DOMINIQUE DEBANNE*, BEAT H. GÄHWILER, AND SCOTT M. THOMPSON MATERIALS AND METHODS Proc. Natl. Acad. Sci. USA Vol. 93, pp. 11225 11230, October 1996 Neurobiology Cooperative interactions in the induction of long-term potentiation and depression of synaptic excitation between hippocampal

More information

Sample Lab Report 1 from 1. Measuring and Manipulating Passive Membrane Properties

Sample Lab Report 1 from  1. Measuring and Manipulating Passive Membrane Properties Sample Lab Report 1 from http://www.bio365l.net 1 Abstract Measuring and Manipulating Passive Membrane Properties Biological membranes exhibit the properties of capacitance and resistance, which allow

More information

FIRST MIDTERM EXAM October 18, 2011 BILD2

FIRST MIDTERM EXAM October 18, 2011 BILD2 FIRST MIDTERM EXAM October 18, 2011 BILD2 WRITE YOUR NAME ON ALL 6 PAGES. ANSWER ALL 10 QUESTIONS (100 POINTS). CONFINE YOUR ANSWERS TO THE SPACE ALLOWED. If you would like to write on the back of the

More information

1) Drop off in the Bi 150 box outside Baxter 331 or to the head TA (jcolas).

1) Drop off in the Bi 150 box outside Baxter 331 or  to the head TA (jcolas). Bi/CNS/NB 150 Problem Set 3 Due: Tuesday, Oct. 27, at 4:30 pm Instructions: 1) Drop off in the Bi 150 box outside Baxter 331 or e-mail to the head TA (jcolas). 2) Submit with this cover page. 3) Use a

More information

Behavioral Neuroscience: Fear thou not. Rony Paz

Behavioral Neuroscience: Fear thou not. Rony Paz Behavioral Neuroscience: Fear thou not Rony Paz Rony.paz@weizmann.ac.il Thoughts What is a reward? Learning is best motivated by threats to survival Threats are much better reinforcers Fear is a prime

More information

Feedback Education and Neuroscience. Pankaj Sah

Feedback Education and Neuroscience. Pankaj Sah Feedback Education and Neuroscience Pankaj Sah Science of Learning Learning The process of acquiring a skill or knowledge that leads to a change in behaviour Memory The ability to retain and recover information

More information

How Synapses Integrate Information and Change

How Synapses Integrate Information and Change How Synapses Integrate Information and Change Rachel Stewart class of 2016 https://nba.uth.tmc.edu/neuroscience/s1/chapter06.html https://nba.uth.tmc.edu/neuroscience/s1/chapter07.html Chris Cohan, Ph.D.

More information

Neuronal Plasticity, Learning and Memory. David Keays Institute of Molecular Pathology

Neuronal Plasticity, Learning and Memory. David Keays Institute of Molecular Pathology Neuronal Plasticity, Learning and Memory David Keays Institute of Molecular Pathology http://keayslab.org Structure 1. What is learning and memory? 2. Anatomical basis 3. Cellular basis 4. Molecular

More information

Synaptic Transmission: Ionic and Metabotropic

Synaptic Transmission: Ionic and Metabotropic Synaptic Transmission: Ionic and Metabotropic D. Purves et al. Neuroscience (Sinauer Assoc.) Chapters 5, 6, 7. C. Koch. Biophysics of Computation (Oxford) Chapter 4. J.G. Nicholls et al. From Neuron to

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION Supplementary Figure 1. Normal AMPAR-mediated fepsp input-output curve in CA3-Psen cdko mice. Input-output curves, which are plotted initial slopes of the evoked fepsp as function of the amplitude of the

More information

Synaptic Integration

Synaptic Integration Synaptic Integration 3 rd January, 2017 Touqeer Ahmed PhD Atta-ur-Rahman School of Applied Biosciences National University of Sciences and Technology Excitatory Synaptic Actions Excitatory Synaptic Action

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION SUPPLEMENTARY INFORMATION doi:10.1038/nature12024 entary Figure 1. Distribution of the number of earned cocaine Supplementary Figure 1. Distribution of the number of earned cocaine infusions in Shock-sensitive

More information

Bioscience in the 21st century

Bioscience in the 21st century Bioscience in the 21st century Neurons, Synapses, and Signaling Dr. Michael Burger Outline: 1. Why neuroscience? 2. The neuron 3. Action potentials 4. Synapses 5. Organization of the nervous system 6.

More information

Rolls,E.T. (2016) Cerebral Cortex: Principles of Operation. Oxford University Press.

Rolls,E.T. (2016) Cerebral Cortex: Principles of Operation. Oxford University Press. Digital Signal Processing and the Brain Is the brain a digital signal processor? Digital vs continuous signals Digital signals involve streams of binary encoded numbers The brain uses digital, all or none,

More information

Ionotropic glutamate receptors (iglurs)

Ionotropic glutamate receptors (iglurs) Ionotropic glutamate receptors (iglurs) GluA1 GluA2 GluA3 GluA4 GluN1 GluN2A GluN2B GluN2C GluN2D GluN3A GluN3B GluK1 GluK2 GluK3 GluK4 GluK5 The general architecture of receptor subunits Unique properties

More information

Notes: Synapse. Overview. PSYC Summer Professor Claffey PDF. Conversion from an signal to a signal - electrical signal is the

Notes: Synapse. Overview. PSYC Summer Professor Claffey PDF. Conversion from an signal to a signal - electrical signal is the PSYC 170 - Summer 2013 - Professor Claffey Notes: Synapse PDF Overview Conversion from an signal to a signal - electrical signal is the - chemical signal is the Presynaptic - refers to that sends/receives

More information

Supplementary Figure 1. Basic properties of compound EPSPs at

Supplementary Figure 1. Basic properties of compound EPSPs at Supplementary Figure 1. Basic properties of compound EPSPs at hippocampal CA3 CA3 cell synapses. (a) EPSPs were evoked by extracellular stimulation of the recurrent collaterals and pharmacologically isolated

More information

Synaptic plasticity. Mark van Rossum. Institute for Adaptive and Neural Computation University of Edinburgh

Synaptic plasticity. Mark van Rossum. Institute for Adaptive and Neural Computation University of Edinburgh Synaptic plasticity Mark van Rossum Institute for Adaptive and Neural Computation University of Edinburgh 1 Human memory systems 2 Psychologists have split up memory in: Declarative memory * Episodic memory

More information

Multi compartment model of synaptic plasticity

Multi compartment model of synaptic plasticity Multi compartment model of synaptic plasticity E. Paxon Frady We introduce a biophysical model of a neuronal network that can accurately replicate many classical plasticity experiments. The model uses

More information

Ultrastructural Contributions to Desensitization at the Cerebellar Mossy Fiber to Granule Cell Synapse

Ultrastructural Contributions to Desensitization at the Cerebellar Mossy Fiber to Granule Cell Synapse Ultrastructural Contributions to Desensitization at the Cerebellar Mossy Fiber to Granule Cell Synapse Matthew A.Xu-Friedman and Wade G. Regehr Department of Neurobiology, Harvard Medical School, Boston,

More information

Biophysical model of AMPA receptor trafficking and its regulation during LTP/LTD

Biophysical model of AMPA receptor trafficking and its regulation during LTP/LTD Biophysical model of AMPA receptor trafficking and its regulation during LTP/LTD Berton A. Earnshaw and Paul C. Bressloff Department of Mathematics, University of Utah Salt Lake City, Utah 84112 Biophysical

More information

Chapter 9: Biochemical Mechanisms for Information Storage at the Cellular Level. From Mechanisms of Memory, second edition By J. David Sweatt, Ph.D.

Chapter 9: Biochemical Mechanisms for Information Storage at the Cellular Level. From Mechanisms of Memory, second edition By J. David Sweatt, Ph.D. Chapter 9: Biochemical Mechanisms for Information Storage at the Cellular Level From Mechanisms of Memory, second edition By J. David Sweatt, Ph.D. Chapter 9: Dendritic Spine Figure 1 Summary: Three Primary

More information

serotonin in learning and plasticity

serotonin in learning and plasticity serotonin in learning and plasticity pt.1 immediate action L P H N NRX N N R X N CDH RhoA/ROCK RAC1 DAG [Ca2+] camp GIRK2 P11 Gq CASK PICK1 VELI MINT-1 CaMK Ca2+ channel AC Gi mglur7 mglur5 Glutamate NMDAR

More information

Optogenetics. how to use light to manipulate neuronal networks. Alexandra Götz

Optogenetics. how to use light to manipulate neuronal networks. Alexandra Götz Optogenetics how to use light to manipulate neuronal networks Alexandra Götz 1 http://www.stanford.edu/group/dlab/optogenetics/ 2 Outline Background Neuron and ion channels Action potential Light sensitive

More information

MCB 160 MIDTERM EXAM 1 KEY Wednesday, February 22, 2012

MCB 160 MIDTERM EXAM 1 KEY Wednesday, February 22, 2012 MCB 160 MIDTERM EXAM 1 KEY Wednesday, February 22, 2012 Name: SID: Instructions: - Write in pen. (No regrades if written in pencil.) - Write name on top of each page. - Clearly label any illustrations.

More information

The Role of Mitral Cells in State Dependent Olfactory Responses. Trygve Bakken & Gunnar Poplawski

The Role of Mitral Cells in State Dependent Olfactory Responses. Trygve Bakken & Gunnar Poplawski The Role of Mitral Cells in State Dependent Olfactory Responses Trygve akken & Gunnar Poplawski GGN 260 Neurodynamics Winter 2008 bstract Many behavioral studies have shown a reduced responsiveness to

More information

BISP194: MOLECULAR MECHANISM OF SYNAPTIC PLASTICITY Spring Quarter

BISP194: MOLECULAR MECHANISM OF SYNAPTIC PLASTICITY Spring Quarter BISP194: MOLECULAR MECHANISM OF SYNAPTIC PLASTICITY Spring Quarter 2011 Instructor: Class Website: Gentry N. Patrick (gpatrick@ucsd.edu) http://www.biology.ucsd.edu/classes/bisp194.sp11 Class Meetings:

More information

mtorc2 controls actin polymerization required for consolidation of long-term memory

mtorc2 controls actin polymerization required for consolidation of long-term memory CORRECTION NOTICE Nat. Neurosci.; doi:1.138/nn.3351 mtorc2 controls actin polymerization required for consolidation of long-term memory Wei Huang, Ping Jun Zhu, Shixing Zhang, Hongyi Zhou, Loredana Stoica,

More information

Brief presynaptic bursts evoke synapse-specific retrograde inhibition mediated by endogenous cannabinoids

Brief presynaptic bursts evoke synapse-specific retrograde inhibition mediated by endogenous cannabinoids Brief presynaptic bursts evoke synapse-specific retrograde inhibition mediated by endogenous cannabinoids Solange P Brown 1 3,Stephan D Brenowitz 1,3 & Wade G Regehr 1 Many types of neurons can release

More information

Long-term synaptic plasticity. N500, 6 Sept., 2016

Long-term synaptic plasticity. N500, 6 Sept., 2016 Long-term synaptic plasticity N500, 6 Sept., 2016 We just finished describing short-term synaptic changes What about long-term changes? How does the brain store information? Outline Origins of the synaptic

More information

Human Brain and Senses

Human Brain and Senses Human Brain and Senses Outline for today Levels of analysis Basic structure of neurons How neurons communicate Basic structure of the nervous system Levels of analysis Organism Brain Cell Synapses Membrane

More information

Neurobiology: The nerve cell. Principle and task To use a nerve function model to study the following aspects of a nerve cell:

Neurobiology: The nerve cell. Principle and task To use a nerve function model to study the following aspects of a nerve cell: Principle and task To use a nerve function model to study the following aspects of a nerve cell: INTRACELLULAR POTENTIAL AND ACTION POTENTIAL Comparison between low and high threshold levels Comparison

More information

Na + K + pump. The beauty of the Na + K + pump. Cotransport. The setup Cotransport the result. Found along the plasma membrane of all cells.

Na + K + pump. The beauty of the Na + K + pump. Cotransport. The setup Cotransport the result. Found along the plasma membrane of all cells. The beauty of the Na + K + pump Na + K + pump Found along the plasma membrane of all cells. Establishes gradients, controls osmotic effects, allows for cotransport Nerve cells have a Na + K + pump and

More information

photometry on the extruded cytoplasm.

photometry on the extruded cytoplasm. Answers To Midterm 2011 Question 1. a) Isoproterenol. Used to dissect presynaptic and postsynaptic components of sympathetic modulation of neuromuscular junction (Orbelli effect). Specifically activates

More information

Applied Neuroscience. Conclusion of Science Honors Program Spring 2017

Applied Neuroscience. Conclusion of Science Honors Program Spring 2017 Applied Neuroscience Conclusion of Science Honors Program Spring 2017 Review Circle whichever is greater, A or B. If A = B, circle both: I. A. permeability of a neuronal membrane to Na + during the rise

More information

Bursting dynamics in the brain. Jaeseung Jeong, Department of Biosystems, KAIST

Bursting dynamics in the brain. Jaeseung Jeong, Department of Biosystems, KAIST Bursting dynamics in the brain Jaeseung Jeong, Department of Biosystems, KAIST Tonic and phasic activity A neuron is said to exhibit a tonic activity when it fires a series of single action potentials

More information

Dopamine modulation of prefrontal delay activity - Reverberatory activity and sharpness of tuning curves

Dopamine modulation of prefrontal delay activity - Reverberatory activity and sharpness of tuning curves Dopamine modulation of prefrontal delay activity - Reverberatory activity and sharpness of tuning curves Gabriele Scheler+ and Jean-Marc Fellous* +Sloan Center for Theoretical Neurobiology *Computational

More information

Astrocyte signaling controls spike timing-dependent depression at neocortical synapses

Astrocyte signaling controls spike timing-dependent depression at neocortical synapses Supplementary Information Astrocyte signaling controls spike timing-dependent depression at neocortical synapses Rogier Min and Thomas Nevian Department of Physiology, University of Berne, Bern, Switzerland

More information

Synap&c Plas&city. long-term plasticity (~30 min to lifetime) Long-term potentiation (LTP) / Long-term depression (LTD)

Synap&c Plas&city. long-term plasticity (~30 min to lifetime) Long-term potentiation (LTP) / Long-term depression (LTD) Synap&c Plas&city synaptic connectivity constantly changes in response to activity and other factors During development: provides the basic wiring of the brain s circuits Throughout rest of life: basis

More information

Timing and the cerebellum (and the VOR) Neurophysiology of systems 2010

Timing and the cerebellum (and the VOR) Neurophysiology of systems 2010 Timing and the cerebellum (and the VOR) Neurophysiology of systems 2010 Asymmetry in learning in the reverse direction Full recovery from UP using DOWN: initial return to naïve values within 10 minutes,

More information

Axon initial segment position changes CA1 pyramidal neuron excitability

Axon initial segment position changes CA1 pyramidal neuron excitability Axon initial segment position changes CA1 pyramidal neuron excitability Cristina Nigro and Jason Pipkin UCSD Neurosciences Graduate Program Abstract The axon initial segment (AIS) is the portion of the

More information

Evaluating the Effect of Spiking Network Parameters on Polychronization

Evaluating the Effect of Spiking Network Parameters on Polychronization Evaluating the Effect of Spiking Network Parameters on Polychronization Panagiotis Ioannou, Matthew Casey and André Grüning Department of Computing, University of Surrey, Guildford, Surrey, GU2 7XH, UK

More information

The control of spiking by synaptic input in striatal and pallidal neurons

The control of spiking by synaptic input in striatal and pallidal neurons The control of spiking by synaptic input in striatal and pallidal neurons Dieter Jaeger Department of Biology, Emory University, Atlanta, GA 30322 Key words: Abstract: rat, slice, whole cell, dynamic current

More information

BIPN100 F15 Human Physiology 1 Lecture 3. Synaptic Transmission p. 1

BIPN100 F15 Human Physiology 1 Lecture 3. Synaptic Transmission p. 1 BIPN100 F15 Human Physiology 1 Lecture 3. Synaptic Transmission p. 1 Terms you should know: synapse, neuromuscular junction (NMJ), pre-synaptic, post-synaptic, synaptic cleft, acetylcholine (ACh), acetylcholine

More information

Analysis of in-vivo extracellular recordings. Ryan Morrill Bootcamp 9/10/2014

Analysis of in-vivo extracellular recordings. Ryan Morrill Bootcamp 9/10/2014 Analysis of in-vivo extracellular recordings Ryan Morrill Bootcamp 9/10/2014 Goals for the lecture Be able to: Conceptually understand some of the analysis and jargon encountered in a typical (sensory)

More information

The Ever-Changing Brain. Dr. Julie Haas Biological Sciences

The Ever-Changing Brain. Dr. Julie Haas Biological Sciences The Ever-Changing Brain Dr. Julie Haas Biological Sciences Outline 1) Synapses: excitatory, inhibitory, and gap-junctional 2) Synaptic plasticity, and Hebb s postulate 3) Sensory maps and plasticity 4)

More information

Systems Neuroscience November 29, Memory

Systems Neuroscience November 29, Memory Systems Neuroscience November 29, 2016 Memory Gabriela Michel http: www.ini.unizh.ch/~kiper/system_neurosci.html Forms of memory Different types of learning & memory rely on different brain structures

More information

Intro. Comp. NeuroSci. Ch. 9 October 4, The threshold and channel memory

Intro. Comp. NeuroSci. Ch. 9 October 4, The threshold and channel memory 9.7.4 The threshold and channel memory The action potential has a threshold. In figure the area around threshold is expanded (rectangle). A current injection that does not reach the threshold does not

More information

Synaptic plasticity and hippocampal memory

Synaptic plasticity and hippocampal memory Synaptic plasticity and hippocampal memory Tobias Bast School of Psychology, University of Nottingham tobias.bast@nottingham.ac.uk Synaptic plasticity as the neurophysiological substrate of learning Hebb

More information

CASE 49. What type of memory is available for conscious retrieval? Which part of the brain stores semantic (factual) memories?

CASE 49. What type of memory is available for conscious retrieval? Which part of the brain stores semantic (factual) memories? CASE 49 A 43-year-old woman is brought to her primary care physician by her family because of concerns about her forgetfulness. The patient has a history of Down syndrome but no other medical problems.

More information

Antiepileptic agents

Antiepileptic agents Antiepileptic agents Excessive excitability of neurons in the CNS Abnormal function of ion channels Spread through neural networks Abnormal neural activity leads to abnormal motor activity Suppression

More information

Differential Effect of TEA on Long-Term Synaptic Modification in Hippocampal CA1 and Dentate Gyrus in vitro

Differential Effect of TEA on Long-Term Synaptic Modification in Hippocampal CA1 and Dentate Gyrus in vitro Neurobiology of Learning and Memory 76, 375 387 (2001) doi:10.1006/nlme.2001.4032, available online at http://www.idealibrary.com on Differential Effect of TEA on Long-Term Synaptic Modification in Hippocampal

More information

Fear conditioning induces associative long-term potentiation in the amygdala

Fear conditioning induces associative long-term potentiation in the amygdala 11 December 1997 Nature 390, 604-607 (1997) Macmillan Publishers Ltd. Fear conditioning induces associative long-term potentiation in the amygdala MICHAEL T. ROGAN, URSULA V. STÄUBLI & JOSEPH E. LEDOUX

More information

Synaptic Communication. Steven McLoon Department of Neuroscience University of Minnesota

Synaptic Communication. Steven McLoon Department of Neuroscience University of Minnesota Synaptic Communication Steven McLoon Department of Neuroscience University of Minnesota 1 Course News The first exam is next week on Friday! Be sure to checkout the sample exam on the course website. 2

More information

9.01 Introduction to Neuroscience Fall 2007

9.01 Introduction to Neuroscience Fall 2007 MIT OpenCourseWare http://ocw.mit.edu 9.01 Introduction to Neuroscience Fall 2007 For information about citing these materials or our Terms of Use, visit: http://ocw.mit.edu/terms. Declarative memory conscious,

More information

Activity-Dependent Development II April 25, 2007 Mu-ming Poo

Activity-Dependent Development II April 25, 2007 Mu-ming Poo Activity-Dependent Development II April 25, 2007 Mu-ming Poo 1. The neurotrophin hypothesis 2. Maps in somatic sensory and motor cortices 3. Development of retinotopic map 4. Reorganization of cortical

More information

B C. i) At what region(s) on the drawing above would you expect a high density of voltage-gated sodium channels?

B C. i) At what region(s) on the drawing above would you expect a high density of voltage-gated sodium channels? MIT Department of Biology 7.013: Introductory Biology - Spring 2005 Instructors: Professor Hazel Sive, Professor Tyler Jacks, Dr. Claudette Gardel 7.013 SECTION NEUROBIOLOGY 2 Part A ligand-gated sodium

More information

Inhibition: Effects of Timing, Time Scales and Gap Junctions

Inhibition: Effects of Timing, Time Scales and Gap Junctions Inhibition: Effects of Timing, Time Scales and Gap Junctions I. Auditory brain stem neurons and subthreshold integ n. Fast, precise (feed forward) inhibition shapes ITD tuning. Facilitating effects of

More information

Synapses throughout the brain are bidirectionally modifiable.

Synapses throughout the brain are bidirectionally modifiable. A unified model of NMDA receptor-dependent bidirectional synaptic plasticity Harel Z. Shouval*, Mark F. Bear*, and Leon N Cooper* *Institute for Brain and Neural Systems, Departments of Physics and Neuroscience,

More information

Modeling Depolarization Induced Suppression of Inhibition in Pyramidal Neurons

Modeling Depolarization Induced Suppression of Inhibition in Pyramidal Neurons Modeling Depolarization Induced Suppression of Inhibition in Pyramidal Neurons Peter Osseward, Uri Magaram Department of Neuroscience University of California, San Diego La Jolla, CA 92092 possewar@ucsd.edu

More information

Structure of a Neuron:

Structure of a Neuron: Structure of a Neuron: At the dendrite the incoming signals arrive (incoming currents) At the soma current are finally integrated. At the axon hillock action potential are generated if the potential crosses

More information

Thalamo-Cortical Relationships Ultrastructure of Thalamic Synaptic Glomerulus

Thalamo-Cortical Relationships Ultrastructure of Thalamic Synaptic Glomerulus Central Visual Pathways V1/2 NEUR 3001 dvanced Visual Neuroscience The Lateral Geniculate Nucleus () is more than a relay station LP SC Professor Tom Salt UCL Institute of Ophthalmology Retina t.salt@ucl.ac.uk

More information