ab Exosome Isolation and Analysis Kit - Flow Cytometry, Plasma

Transcription

1 Version 1 Last updated 25 May 2018 ab Exosome Isolation and Analysis Kit - Flow Cytometry, Plasma For the isolation/detection of exosomes from human plasma, urine or cell culture media. This product is for research use only and is not intended for diagnostic use. Copyright 2018 Abcam. All rights reserved

2 Table of Contents 1. Overview 1 2. Materials Supplied and Storage 2 3. Materials Required, Not Supplied 3 4. General guidelines, precautions, and troubleshooting 4 5. Reagent Preparation 5 6. Sample Preparation 6 7. Assay Procedure 9 8. Data Analysis Typical Data Notes 14 Copyright 2018 Abcam. All rights reserved

3 1. Overview Exosome Isolation and Analysis Kit - Flow Cytometry, Plasma (ab228565) is a simple immunobead assay for isolation/detection of exosome, using a bead-bound anti-cd63 capture antibody and a fluorochrome conjugated anti-cd9 detection antibody. The kit provides reproducible results and can be run in parallel to exosome immunophenotyping. Incubate pre-enriched exosomes with capture beads in the dark overnight at room temperature without stirring. Add the Primary detection antibody and mix gently. Incubate in the dark for 1h at 4ºC without stirring. Wash the sample (bead-bound exosomes) with 1X Assay Buffer. Collect magnetic beads and discard supernatant. Resuspend beads in 1X Assay Buffer and add the Secondary detection reagent. Incubate in the dark for 30 minutes at 4ºC without stirring. Wash the sample, collect the magnetic beads and resuspend the sample in 1X Assay Buffer. Analyse in a flow cytometer or (store in the dark, 4 C, maximum 2 hours prior to analysis)

4 2. Materials Supplied and Storage Store kit at 4 C in the dark immediately on receipt and check below for storage for individual components. Do not freeze. Kit can be stored for 1 year from receipt, if components have not been reconstituted. Aliquot components in working volumes before storing at the recommended temperature. Item Quantity Storage temperatur e (before prep) Storage temperatur e (after prep) Superparamagnetic Capture Beads (CD63; Clone TEA3/18) Primary detection antibody (Anti-CD9 biotin; Clone VJ1/20) Secondary detection reagent (Streptavidin-Phycoerythrin) 2500 μl (100 μl/test) 125 μl (5 μl/test) 125 μl (5 μl/test) 4ºC 4ºC 4ºC 4ºC 4ºC 4ºC Assay Buffer 10X (PBS 10% BSA, ph 7,4-10x) 10 ml 4ºC 4ºC HBS-BSA 2% 10 ml 4ºC 4ºC

5 3. Materials Required, Not Supplied These materials are not included in the kit, but will be required to successfully perform this assay: Pre-enriched exosomes by ultra-centrifugation. Magnetic rack (12x75mm). 12x75 mm Polystyrene Round Bottom Tubes (cytometer tubes). Sterile syringe filter with a 0.45 μm pore size. Syringe of adequate volume.

6 4. General guidelines, precautions, and troubleshooting Please observe safe laboratory practice and consult the safety datasheet. For general guidelines, precautions, limitations on the use of our assay kits and general assay troubleshooting tips, particularly for first time users, please consult our guide: For typical data produced using the assay, please see the assay kit datasheet on our website.

7 5. Reagent Preparation 5.1 1X Assay Buffer Dilute to 10X Assay Buffer 10-fold with deionized or distilled water before use. All other reagents are supplied ready to use. Avoid microbial contamination of the reagent. Reagents should not be used if evidence of deterioration is observed. Note: Microspheres and reagents should be protected from prolonged exposure to light throughout this procedure.

8 6. Sample Preparation General sample information: We recommend that you use fresh samples for the most reproducible assay. The kit allows the detection of isolated exosomes from differential ultracentrifugation (Section 6.1) as well as direct detection in the sample (Section 6.2). Note: Depending on the type of exosomes used, the number of exosomes may vary with respect to the concentration of the protein.

9 6.1 Purification of exosomes by differential ultracentrifugation: The kit has been validated for pre-enriched human exosomes from cell culture and bodily fluids, such as serum/plasma, and urine, through an ultracentrifugation protocol. The principle for exosome purification is the same for cell culture and bodily fluids, but due to the viscosity of some fluids it is necessary to dilute them with an equal volume of PBS, before centrifugations.

10 6.2 Sample pre-treatment for direct exosome detection on human plasma: The sample pretreatment for direct exosome detection from plasma is not recommended for detection of exosomes from any other bodily fluids or cell culture media μl of plasma typically provides enough exosomes for most standard types of analysis.

11 7. Assay Procedure Note: The isolation and detection success is dependent on the quality of the sample pre-enrichment process. 7.1 Isolation of CD63+ exosomes: 1. Resuspend the capture beads by vortexing for approximately 20 seconds. 2. Add 100 μl of the capture beads to each 12x75 mm polystyrene round bottom tube (cytometer tube). 3. Add 5 μl of previously prepared exosomes (Section 6) to the appropriate tubes. Mix gently by pipetting up and down several times with a pipette and vortexing for a few seconds. 4. Incubate in the dark overnight at room temperature. Do not stir. 7.2 Stain exosomes for flow cytometry: 1. After overnight incubation, add the suggested volume indicated of the Primary detection antibody (5μL of the supplied antibody) to the bead-bound exosomes tube. Mix gently by pipetting and/or by tapping. It is advisable to prepare an additional tube with the appropriate isotype control or without exosomes, for background determination. 2. Incubate in the dark 60 minutes at 4ºC, without stirring. 3. Wash the sample (bead-bound exosomes) by adding 1 ml of Assay Buffer 1X. 4. Collect the Magnetic beads by placing tubes on a magnetic rack and incubate 5 minutes or by centrifugation at 2500 x g for 5 minutes. Remove supernatant from tubes by hand-decanting or by aspiration. Take care not to disturb the microspheres, and make sure not to leave more than 100 μl of supernatant in the tube. 5. Remove the tubes from the magnetic rack and resuspend the microspheres in the remaining 100 μl of Assay Buffer 1X. Mix gently by pipetting. 6. Add 5 μl of the Secondary detection reagent to each tube. Mix gently by pipetting up and down several times with a pipettor. 7. incubate in the dark 30 minutes at 4ºC, without stirring.

12 8. Wash the sample (bead-bound exosomes) by adding 1 ml of Assay Buffer 1X. 9. Collect the Magnetic beads by placing tubes on a magnetic rack and incubate 5 minutes or by centrifugation at 2500 x g for 5 minutes. Remove supernatant from tubes by hand-decanting or by aspiration. Take care not to disturb the microspheres, and make sure not to leave more than 100 μl of supernatant in the tube. 10. Resuspend the sample in 350 μl of Assay Buffer 1X and acquire on a flow cytometer or store in the dark max up to 2 hours at 4ºC, until the analysis is carried out.

13 8. Data Analysis 1. Assay Acquisition An adequate gating strategy FSC / SSC and FL3 / FL4, helps to bead population identification and discrimination of doublets on flow cytometer. 1. Gate on the single population(s) on a Forward Scatter vs. Side Scatter plot in linear scale (Figure A). 2. Gate on the single population(s) on a FL3 vs. FL4 channel (bead auto fluorescence) in logarithmic scale (Figure B). 3. Using the FL2 channels, determine if any bead populations tested positive for the exosome. Δ Note: A positive bead will produce a fluorescent peak in the FL2 channel.

14 9. Typical Data Data provided for demonstration purposes only. Figure 1. Flow cytometric analysis of exosomes bound to Superparamagnetic Capture Beads. Exosomes pre-enriched from PC3 cell culture (A) or human plasma (B) were resuspended in PBS and bound to CD63 Supramagnetic Capture Beads overnight. The following day the bead-bound exosomes were indirectly stained using Primary detection antibody (CD9) and Secondary detection reagent (Streptavidin-PE) and then analysed by flow cytometry.

15 Several measurements of multiple concentrations of lyophilized exosomes were analyzed across the reportable range of the kit, finding the linearity of the kit in a broad range of concentrations, allowing fluorescence interpolation in the estimation of concentrations. Figure 2. Dynamic range of the assay analyzed by flow cytometry. Relationship between background noise and specific signal at different exosome concentrations. The limit of detection is the lowest quantity of exosomes that can be distinguished from the absence of analyte (a blank value), and as reference, was determined in >0,125 μg which corresponds with >1.5 x 10 8 vesicles. Whilst the upper limit or saturation level was established in 8 μg. For both technical specifications were used exosome form PC3 cell culture media (12 x 10 8 vesicles / μl).

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20 Technical Support Copyright Abcam. All Rights Reserved. The Abcam logo is a registered trademark. All information / detail is correct at time of going to print. Austria wissenschaftlicherdienst@abcam.com France supportscientifique@abcam.com Germany wissenschaftlicherdienst@abcam.com Spain soportecientifico@abcam.com Switzerland technical@abcam.com Deutsch: Français: UK, EU and ROW technical@abcam.com +44(0) Canada ca.technical@abcam.com US and Latin America us.technical@abcam.com Asia Pacific hk.technical@abcam.com (852) China cn.technical@abcam.com Japan technical@abcam.co.jp +81-(0) Singapore sg.technical@abcam.com Australia au.technical@abcam.com +61-(0) New Zealand nz.technical@abc.com +64-(0) Copyright 2018 Abcam. All rights reserved