How Do You Measure Success in ALL?: Assessment of MRD

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1 How Do You Measure Success in ALL?: Assessment of MD Martin Schrappe, MD, PhD University Medical Center Schleswig-Holstein Christian-Albrechts-University Kiel, Germany

2 Topics Current risk classification in ALL MD response Treatment and endpoints AIEOP-BFM ALL 2000 AIEOP-BFM ALL 2009 Perspectives ALL, acute lymphoblastic leukemia; MD, minimal residual disease.

3 Topics Current risk classification in ALL Based on immunphenotype, genetics, and clinical factors (eg, age, WBC) esponse to (early) treatment: Prednisone response in PB Cytomorphology: BM analysis on days 8, 15, and EoI MD by FCM and PC Combination of the two principles BM, bone marrow; EoI, extensions of indication; FCM, flow cytometry; PB, peripheral blood; PC, polymerase chain reaction; WBC, white blood cell/count

4 van Dongen JJ, et al. Lancet. 1998;352(9142):

5 elapse-free Survival in I-BFM-SG Study According to the Combined MD Information at Timepoints 1 and 2 (n = 129) 43% of patients 4% of relapses 43% of patients 42% of relapses 14% of patients 54% of relapses van Dongen JJ, et al. Lancet. 1998;352(9142): van Dongen JJ, et al. Blood. 2015;125(26):

6 MD Timepoints 1a I A -D + I A -P + AIEOP-BFM ALL 2000: Treatment and MD 1 1b 2 day 33 day 78 I B H: PED-P t(9;22) t(4;11) N d33 M H: MD level at tp. 2 >=10-3 H - 1 H 3' S : no H criteria MD neg. at tps. 1+2 M: no H criteria no S-criteria H 2' H 1' S S - 2 M M - 2 (3) (4) (5) I I 12 Gy* only T-ALL 10 weeks interim maintenance with 6-MP / MTX 12 Gy* only T-ALL 12Gy* I 6-MP/MTX 6-MP/MTX I I I 4 Wks. 4 Wks. 3 H - 2 H 1' H 2' H 3' AIEOP BFM H 1' H 2' 18Gy* H 3' 12Gy* 0 BM sampling G-CSF I A -D: Protocol I, Phase A with DEXA I A -P: Protocol I, Phase A with PED 22 S C T # * presymptomatic cranial irradiation (18[24] Gy for CNS pos. pts only) # selected indications for allo-sct (in all strata of H) S: 2 molecular marker with a sensitivity of =<10-4 available (obligatory) W. 6-MP, 6-mercaptopurine; CNS, central nervous system; DEXA, dexamethasone; G-CSF, granulocyte-colony stimulating factor; Gy, Gray; H, high-risk; MD, medium-risk; MTX, methotrexate; N, non-responder; PED, prednisone;, randomization; SCT, stem-cell transplantation; S, standard-risk; tp, timepoint. Conter V, et al. Blood. 2010;115(16): Moricke A, et al. Blood. 2016;127(17): Schrappe M, et al. Blood. 2011;118(8):

7 pcb- and T-ALL in AIEOP-BFM ALL 2000: Distribution of Patients in MD isk Groups Distribution (%) pcb-all T-ALL 0 MD-S MD-I MD-H MD isk Groups AIEOP-BFM ALL 2000 I, intermediate-risk; pcb, precursor B-cell, T-ALL, T-cell ALL Conter V, et al. Blood. 2010;115(16): Schrappe M, et al. Blood. 2011;118(8):

8 AIEOP-BFM ALL 2000: Treatment and MD (3) (4) (5) MD Timepoints 1a I A -D + I A -P + 1 1b 2 day 33 day 78 I B H: PED-P t(9;22) t(4;11) N d33 M H: MD level at tp. 2 >=10-3 H - 1 H 3' S : no H criteria MD neg. at tps. 1+2 M: no H criteria no S-criteria H 2' H 1' S S - 2 M M - 2 I I 12 Gy* only T-ALL 10 weeks interim maintenance with 6-MP / MTX 12 Gy* only T-ALL 12Gy* I 6-MP/MTX 6-MP/MTX I I I 4 Wks. 4 Wks. 0 BM sampling H - 2 H 1' 20 H 2' + I A -D: Protocol I, Phase A with DEXA I A -P: Protocol I, Phase A with PED H 3' AIEOP BFM 22 H 1' H 2' S C T # Gy* H 3' 12Gy* W. Conter V, et al. Blood. 2010;115(16): Moricke A, et al. Blood. 2016;127(17): Schrappe M, et al. Blood. 2011;118(8):

9 Moricke A, et al. Blood. 2016;127(17):

10 AIEOP-BFM ALL 2000 MD Timepoints Day 33 Day 78 S S-1 1 I DXM p.o. (21d+) 10 mg/m²/day S-2 PDN p.o. (21d+) 60 mg/m²/day pct (in selected subgroups) MT MT IA-D IA-P IB VC i.v. 1.5 mg/m²/dose max. 2 mg M M M-1 2 DN p.i. (1 h) 30 mg/m²/dose M-2 I E.coli L-ASP p.i.(1 h)/i.m. 5,000 IU/m²/dose Int MT pct (in selected subgroups) I MT MT H H-1 3 H-2 MTX IT H H H 3 G-CSF 2 G-CSF 1 G-CSF H 1 G-CSF H 2 G-CSF H 3 G-CSF I Int MT I Int MT I BMP/ MD Days H H H 1 G-CSF 2 G-CSF 3 G-CSF allohsct pct MD pct MT MT wks BMP, bone marrow puncture; DN, daunorubicin; DXM, dexamethasone; L-ASP, L-asparaginase; PDN, prednisone; VC, vincristine Conter V, et al. Blood. 2010;115(16): Moricke A, et al. Blood. 2016;127(17): Schrappe M, et al. Blood. 2011;118(8):

11 P AIEOP-BFM ALL 2000: CI of elapse (5 Years) DXM n (%) PDN n (%) P (X²) TM (related to Prot. IA) 42 (2.4%) 19 (1.0%).001 infection-related 29 (1.6%) 13 (0.6%).008 other 13 (0.7%) 6 (0.4%) , SE = , SE =.007P(Gray) < DXM (N=1853) CI-el, 229 relapses years PDN (N=1867) CI-el, 323 relapses CI-el, cumulative incidence of relapse; SE, standard error; TM, transplantation-related morbidity/mortality. Moricke A, et al. Blood. 2016;127(17):

12 P dexa_pred10.tab 06SEP13 AIEOP-BFM ALL 2000: CI of elapse and EFS (5 Years) , SE= , SE= P(Log-ank)= P(Gray) < , SE= , SE= years DXM (N = 1853) EFS, 341 events CI-el, 229 relapses PDN (N = 1867) EFS, 401 events CI-el, 323 relapses EFS, event-free survival. Moricke A, et al. Blood. 2016;127(17):

13 AIEOP-BFM ALL 2000, Survival (5 Years) dexa_pred10.tab 06SEP13 P , SE = , SE = P(Log-ank)= DXM (N = 1853) SU, 216 deaths years SU, survival PDN (N = 1867) Moricke A, et al. Blood. 2016;127(17): SU, 209 deaths

14 Is MD a suitable endpoint in a (large) clinical trial (n = 3740)??? Moricke A, et al. Blood. 2016;127(17):

15 250 no data TEL-AML1 positive TEL-AML1 negative AIEOP-BFM ALL 2000: DEXA vs PED Composition of elapses pb-all, Pred Good-esponse TEL-AML1 elapse risk group MD response d S1/S2 S3/S4 250 no data good poor Dexa Pred 0 Dexa Pred 0 Dexa Dexamethasone mainly prevented those relapses that would have had a good chance of cure with relapse treatment. Therefore, PED-treated patients had superior survival after Moricke A, et al. Blood. 2016;127(17): treatment of recurrence. Pred

16 Definition of Standard isk ALL in Trial AIEOP-BFM ALL 2000

17 elapse-free Survival in I-BFM-SG Study According to the Combined MD Information at Time Points 1 and 2 (n = 129) 43% of patients 4% of relapses 43% of patients 42% of relapses 14% of patients 54% of relapses van Dongen JJ, et al. Lancet. 1998;352(9142): van Dongen JJ, et al. Blood. 2015;125(26):

18 Trial AIEOP-BFM ALL 2000: isk Stratification Standard isk (S) MD negative with 2 PC markers for IgH and T-cell receptor rearrangements in week 5 and week 12 after induction and consolidation therapy, respectively Marker sensitivity at least 10-4 No clinical/biologic H criteria M MD positive at w5 a./o. w12 and MD at w12 <10-3 with 2 markers or MD not classifiable; no clinical/biological H criteria H MD 10-3 at w12 or Prednisone-Poor-esponse, or Non-emission end of induction, or t(9;22) or t(4;11) IgH, immunoglobulin heavy chain. Schrappe M, et al. Blood. 2011;118(8):

19 ALL-BFM 83 pefs (10 Years) andomization S-Low With vs Without einduction 0.81, SE = 0.05 P (log-rank) =.002 with reinduction pefs , SE = 0.06 without reinduction years S-L/1, without reinduction (N = 66, 29 events) S-L/2, with reinduction (N = 60, 11 events) Möricke A, et al. Leukemia. 2010;24(2):

20 AIEOP-BFM ALL 2000 S-1 I MT MD Timepoints Week 5 Week 12 S 1 S-2 MT IA-D IA-P IB Controlled treatment M-1 I reduction in I patients M selected M by 2 early MD negativity M-2 MT MT H H-1 3 H-2 H 3 H 1 H 2 H 2 H 1 H 3 AIEOP BFM H 1 I I I I H 2 H 3 MT MT pct MT wks Conter V, et al. Blood. 2010;115(16): Moricke A, et al. Blood. 2016;127(17): Schrappe M, et al. Blood. 2011;118(8):

21 educed Intensity Delayed Intensification Protocol I Standard Intensity Delayed Intensification Protocol DEXA 10 mg/m 2 /d VC 1.5 mg/m 2 /d DOX 30 mg/m 2 /d L-ASP 10,000 U/m 2 /d (E.coli- MEDAC/KYOWA) CPM 500 mg/m 2 /d CPM 1000 mg/m 2 /d AA-C 75 mg/m 2 /d TG 60 mg/m 2 /d MTX IT BM/MD Day AA-C, cytosine arabinoside; CPM, cyclophosphamide; DOX, doxorubicin; TG, thioguanine Schrappe M, et al. Blood. 2011;118(8):

22 educed Intensity Delayed Intensification Protocol I Standard Intensity Delayed Intensification Protocol eduction of treatment DEXA 10 mg/m 2 /d VC 1.5 mg/m 2 /d DOX 30 mg/m 2 /d L-ASP 10,000 U/m 2 /d (E.coli- MEDAC/KYOWA) CPM 500 mg/m 2 /d AA-C 75 mg/m 2 /d TG 60 mg/m 2 /d DEX: by 30% VC: by 50% DOX: by 50% CPM: by 50% Duration minus 3 weeks CPM 1000 mg/m 2 /d MTX IT BM/MD Day Schrappe M, et al. Blood. 2011;118(8):

23 AIEOP-BFM ALL 2000 andomization in Standard isk (S) ALL 4937 pts registered in trial AIEOP-BFM ALL pts eligible for trial 1346 eligible for randomization in S 64 S not eligible due to early events etc; 182 refused randomization 1164 randomized in S (= 86.5% of eligible and accessible pts) Schrappe M, et al. Blood. 2016;128: Abstract 4.

24 100 AIEOP-BFM ALL 2000: S - Intent-to-Treat Event-Free Survival (EFS) at 5 Years (%) 40 median FU: 8.6 years rand_sr.tab 16NOV Log-ank P = years Experimental Arm: educed intensity (Protocol I): EFS 90.7% (SE = 1.2), N = 581, 60 events Control arm: egular DI (Protocol ): EFS 94.7% (SE = 0.9), N = 583, 45 events DI, delayed intensification. Schrappe M, et al. Blood. 2016;128: Abstract 4.

25 AIEOP-BFM ALL 2000 educed intensity delayed intensification (Prot. I) vs Standard delayed intensification (Prot. ) Analyzed per treatment given

26 100 AIEOP-BFM ALL 2000: S - As Treated Event-Free Survival (EFS) at 5 Years (%) Log-ank p = years educed intensity (Protocol I), EFS 90.6% (SE = 1.2), N = 584, 62 events Control: egular DI (Protocol ), EFS 94.9% (SE = 0.9), N = 579, 42 events Schrappe M, et al. Blood. 2016;128: Abstract 4.

27 30 25 AIEOP-BFM ALL 2000: S - As Treated Cumulative Incidence of elapse at 5 Years rand_sr.tab 16NOV16 Cum. Incidence elapse P(Gray)= years educed intensity (Protocol I): CI 7.5% (SE = 1.1), N = 584, 50 events Control: egular DI (Protocol ): CI 4.1% (SE = 0.8), N = 579, 35 events Schrappe M, et al. Blood. 2016;128: Abstract 4.

28 AIEOP-BFM ALL 2000: S, pb, ETV6/UNX1 Negative - As Treated 100 EFS (at 5 Year) rand_sr.tab 16NOV16 (%) Log-ank P = years educed intensity (Protocol I): EFS 87.7% (SE = 1.8), N = 325, 43 events Control: egular DI (Protocol ): EFS 94.2% (SE = 1.3), N = 316, 25 events Schrappe M, et al. Blood. 2016;128: Abstract 4.

29 AIEOP-BFM ALL 2000: S (Age 10 Years) As Treated EFS (5 years) (%) 40 rand_sr.tab 28NOV Log-ank P = years educed intensity (Protocol I): EFS 81.6% (SE = 4.0), N = 96, 17 events Control: egular DI (Protocol ): EFS 95.2% (SE = 2.4), N = 84, 6 events Schrappe M, et al. Blood. 2016;128: Abstract 4.

30 AIEOP-BFM ALL 2000: S (Age 10 Years ) As Treated 30 Cumulative Incidence of elapse at 5 Years 25 Cum. Incidence rand_sr.tab 28NOV P(Gray)= educed intensity (Protocol I): CI 14.1% (SE = 3.7), N = 96, 13 events Control: egular DI (Protocol ): CI 1.2% (SE = 1.2), N = 84, 3 events Schrappe M, et al. Blood. 2016;128: Abstract 4. years

31 AIEOP-BFM ALL 2009 ecruitment: ecruitment of new pts closed Dec 31, eligible pts before (please see details in AIEOP-BFM ALL 2009 report) ClinicalTrials.gov Identifier: NCT ( EudraCT Number: (

32 S: AIEOP-BFM ALL 2009 isk Stratification (new) * No H criteria and PC-MD-S (new: with at least one sensitive marker) or Not stratifiable by PC-MD, and FCM-MD on day 15 <0.1% M: No S criteria; no H criteria Not stratifiable by any MD method H: Prednisone Poor-esponse Non-emission at day 33 (induction failure) MLL/AF4-positive Hypodiploidy <45 Chromosomes PC-MD-H: PC-MD >10-3 at week 12 PC-MD-M SE in non-t-all: PC-MD >10-3 at d33 and still positive at week 12 FCM-MD d15 >10% * Age <365 days: not eligible for AIEOP-BFM ALL 2009 but eligible for Interfant-06 ClinicalTrials.gov Identifier: NCT ( EudraCT Number: (

33 AIEOP-BFM ALL 2009: Current Treatment Strategy in T-ALL MD Timepoints d15 TP1 TP2 d 33 d 78 T - non-h IA D IB M MD-H: PC at TP2 >= 5x10-4 (>= 0.05%) Ind Failure FCM d15 >10% T - H IB H H H IA CPM H I I I IB + SCT Exp. window + SCT w ClinicalTrials.gov Identifier: NCT ( EudraCT Number: (

34 andomized Treatment Questions 1 : eduction of induction related toxicity in pb VL patients 2 : Late intensification in pb M patients H : Early intensification in all H patients: Primary endpoint - MD VL, very low-risk

35 MD Timepoints Immunology unknown or pb-all + TEL/AML1 neg + FCM-MD d15 >=0.1% pb/non-h TEL/AML1 pos and/or FCM-MD d15 <0.1% AIEOP-BFM ALL 2009: Treatment Strategy in Bpc-ALL d15 IA IA 1 IA IB w IA Prot. IA with 4 DN doses (day 8, 15, 22 and 29) IA Prot. IA with 2 DN doses (day 8 and 15) * in patients with CNS disease (CNS 3) tct with 12 Gy/18 Gy (dose age-adapted)) & since 2010: lipos. DN + FLA CT, cranial radiotherapy; FLA, fluradabine and cytarabine

36 MD Timepoints Immunology unknown or pb-all + TEL/AML1 neg + FCM-MD d15 >=0.1% pb/non-h TEL/AML1 pos and/or FCM-MD d15 <0.1% AIEOP-BFM ALL 2009: Treatment Strategy in Bpc-ALL d15 IA IA 1 IA IB M S M w IA Prot. IA with 4 DN doses (day 8, 15, 22 and 29) IA Prot. IA with 2 DN doses (day 8 and 15) * in patients with CNS disease (CNS 3) tct with 12 Gy/18 Gy (dose age-adapted)) & since 2010: lipos. DN + FLA

37 Pieters, et al. Cancer. 2011;117(2):

38 andomization PEG-L-Asparaginase in M pb-all Monitoring of Enzyme Activity, ASN Depletion (CSF), and Antibody Formation Protocol A B Maintenance Protocol -ASP+ A B Maintenance weeks PEG-L-ASP (2,500 IU/m 2 ) Analysis of ASP activity and antibodies in serum Analysis of ASP activity and antibodies in serum, asparagine in CSF LP, intrathecal MTX ASN, asparaginase; CSF, cerebrospinal fluid; LP, lumbar puncture; PEG-L-ASP, pegylated L-asparaginase

39 AIEOP-BFM ALL 2009: Treatment with pegaspase IV T/non-H IA D IB M pct 12 Gy if age 2 yrs* / in selected subgroups no CT + 6x IT MTX Immunology unknown or pb-all + TEL/AML1 neg + FCM-MD d15 >0.1% IA S pb # /non-h TEL/AML1 pos and/or FCM-MD d15 <0.1% IA 1 IA IB M M MD-M SE MD-H only Nd33 only FCM d15 10% 2 H T-ALL pb-all # IA CPM IA pct 12 Gy if age 2 yrs* / in selected subgroups no CT + 6x IT MTX IB H H H H I I I IB + SCT DNX-FLA + SCT PEG L-asparaginase (2500 IU/m²) IV IA Prot. IA with 4 DN doses (day 8, 15, 22 and 29) IA Prot. IA with 2 DN doses (day 8 and 15) # or immunophenotype unknown * in patients with CNS disease (CNS 3) tct with 12 Gy/18 Gy (dose age-adapted)) w PEG-ASP 2500 IU/m 2 every 2 weeks, over 20 weeks in total PEG-ASP 4 x 2500 IU/m 2 over 4 weeks

40 MD in H Patients Strategy in AIEOP-BFM ALL 2009

41 Intensification of Consolidation Phase in the H group andomization H andomization of 4 Weeks (4 doses) vs No Additional PEG-L-ASP in Prot. IB

42 andomization PEG-L-ASP in H (done with weekly ASP enzyme monitoring) Prot. IA / IB IA IB Prot. IA / IB-ASP+ IA IB weeks PEG-L-ASP (2500 IU/m 2 )

43 andomization PEG-L-ASP in H (done with weekly ASP enzyme monitoring) Prot. IA / IB Prot. IA / IB-ASP+ IA IB IA IB weeks MD at week 12 = primary endpoint PEG-L-ASP (2500 IU/m 2 )

44 AIEOP-BFM ALL 2009 T/non-H IA D IB M pct 12 Gy if age > 2 yrs* / in selected subgroups no CT + 6x IT MTX Immunology unknown or pb-all + TEL/AML1 neg + FCM-MD d15 >0.1% IA S pb # /non-h TEL/AML1 pos and/or FCM-MD d15 <0.1% IA 1 IA IB M M MD-M SE MD-H only Nd33 only FCM d15 >10% 2 H T-ALL pb-all # IA CPM IA pct 12 Gy if age 2 yrs* / in selected subgroups no CT + 6x IT MTX IB H H H H I I I IB + SCT DNX-FLA + SCT w IA Prot. IA with 4 DN doses (day 8, 15, 22 and 29) IA Prot. IA with 2 DN doses (day 8 and 15) PEG-ASP 2500 IU/m 2 every 2 weeks, over 20 weeks in total # or immunophenotype unknown * in patients with CNS disease (CNS 3) tct with 12 Gy/18 Gy (dose age-adapted)) PEG-ASP 4 x 2500 IU/m 2 over 4 weeks

45 Target Population: MD High-isk Group TP1 TP2 MD Timepoints H P IA IB H 1' H 2' H 3' P: (4y-pEFS) MD neg. 0.70, SE = 0.08 (N = 42) Years MD < , SE = 0.10 (N = 27) MD , SE = 0.10 (N = 25) H 1' H 2' H 3' 6-MP/ MTX MD-H-only : SCT VHL : Experimental therapy VHL, very high-risk leukemia

46 Patients MD-esponse After DNX/FLA MD after DNX/FLA (log-step) -6 negative Immunephenotyp e T pb T T pb T T pb T pb T T pb pb pb pb T

47 Perspectives Genetics and esponse

48 10-Year Survival in the 624 Study Patients With Induction Failure Who Had Genetic Data, According to Genetic Abnormality Schrappe M, et al. N Engl J Med. 2012;366(15):

49 New Candidate Prognostic Factors: CLF2 and IKZF1: BFM Data CLF2/P2Y8 + IKZF1 del + Cario G, et al. Blood. 2010;115(26): Dörge P, et al. Haematologica Aug 8 [Epub ahead of print]

50 New Candidate Prognostic Factors: CLF2 and IKZF1 CLF2/P2Y8 + IKZF1 del + 5-y OS: IKZF1 not del. 0.92, SE = 0.01 IKZF1 del. 0.82, SE = 0.04 Independent confirmation of prognostic impact in AIEOP patients with ALL. Limited clinical utility as prognostic impact on overall survival is limited. Del., deleted; OS, overall survival Cario G, et al. Blood. 2010;115(26): Dörge P, et al. Haematologica Aug 8 [Epub ahead of print]

51 Treatment Outcome of IKZF1del-Negative and Positive Childhood ALL Patients by EG Deletion IKZF1del EFS (5 years) , SE = , SE = 0.04 P Combination with other factors can refine prognostic potential Log-ank P = EGwt (N = 138, 54 events) years EGdel (N = 26, 5 events) Zaliova M, et al. Leukemia. 2014;28(1):

52 IKZF1 Screening by MLPA MLPA kit P335-A3 (MC-Holland): Analysis of additional genes*, e.g. CDKN2A, CDKN2B, PAX5, and PA1 (=CLF2) Testing of all single deletions and all possible deletion combinations for effect on outcome MLPA, Multiplex ligation-dependent probe amplification. *associated with GATA3 alleles variants.

53 Definition: IKZF1 plus Deletion of IKZF1 and: PAX5 and/or CDKN2A and/or CDKN2B and/or CLF2 (PA) and Negativity for EG deletion

54 Conclusions evision of stratification systems needed by incorporating newly defined high-risk subgroups Combining validated genetic profiles and MD results may allow novel approaches (Example IKZF1 or IKZF1 plus ) The role of intensified L-ASPase therapy not yet clear (ongoing randomizations in trial 2009) Treatment intensity should not be increased but rather be reduced in well-controlled clinical trials Potentially, acute toxicity can be reduced by controlled introduction of new alternative treatment modalities

Supplementary appendix

Supplementary appendix Supplementary appendix This appendix formed part of the original submission and has been peer reviewed. We post it as supplied by the authors. Supplement to: Biondi A, Schrappe M, De Lorenzo P, et al.

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