Acyl-Coenzyme A Thioesters for Pesticides, Parkinson s, and Metabolism. Nathaniel W Snyder, PhD, MPH Blair Lab August 11, 2014

Size: px
Start display at page:

Download "Acyl-Coenzyme A Thioesters for Pesticides, Parkinson s, and Metabolism. Nathaniel W Snyder, PhD, MPH Blair Lab August 11, 2014"

Transcription

1 Acyl-Coenzyme A Thioesters for Pesticides, Parkinson s, and Metabolism Nathaniel W Snyder, PhD, MPH Blair Lab August 11, 214 1

2 Biological Importance of Acyl-CoAs Krebs Cycle Fatty Acid Metabolism Acyl- Coenzyme A Posttranslational Modifications Xenobiotic Metabolism 2

3 MS/MS of Acyl-Coenzyme A Thioesters Neutral Loss 57.2 Da Snyder, et al. RCM. 214, Basu, et al. Anal. Chem. 211, Snyder, et al. In Preparation 3

4 Rotenone and Parkinson s Disease Rotenone Widely used pesticide (before 27) Decades of laboratory/animal studies on toxicity Hypothesized similarity to 1-methyl-4-phenylpyridinium (MPP+) and precursor MPTP Exposure associated with Parkinson s disease Agricultural Health Study Farming and Movement Evaluation 11 PD cases (confirmed by two neurologist consensus) 358 age, sex, state matched controls PD associated with rotenone exposure R = 2.5 ( ) Tanner et al. EHP

5 Rotenone and Metabolism H H H 3 C rotenone CH 3 5

6 Rotenone Alters Short Chain Acyl-CoA Levels Acetyl-CoA Acetyl-CoA (%) Succinyl-CoA log[rotenone] M 1 βhb-coa Succinyl-CoA (%) log[rotenone] M BHB-CoA (%) log[rotenone] M Basu, et al. Chemical Research in Toxicology

7 Rotenone Alters Fatty Acid Metabolism [ 13 C16]- Palmitate % labeling in Acetyl CoA M DMS Rotenone [ 13 C 6 ]- Glucose Pyruvate Acetyl-CoA Malonyl-CoA Fatty Acyl- CoAs BHB-CoA [ 13 C 16 ]- Palmitate Acetoacetyl-CoA [ 13 C 4 ]- ctanoate % labeling in Acetyl CoA M xaloacetate Malate Fumarate Succinate Succinyl-CoA Citrate cis-aconitate Isocitrate α-keto-glutarate HMG-CoA Propionyl-CoA Worth, et al. In Review JBC. 214 (see poster TXI:58. Tu Evening) 7

8 Rotenone Reduces Medium Chain Acyl-CoAs DMS Rotenone relative abundance * * *. C2: C4: C6: C8: C1: acyl-coa C12: C14: C16: C18: 8

9 Palmitoylcarnitine Increases with Rotenone Relative abundance of palmitoyl carnitine DMS Rotenone 9

10 Many Roads to Acetyl-CoA unlabeled carbon 13 C from reduc1ve metabolism 13 C from oxida1ve metabolism H H oxaloacetate H H MD H L-malate FH H H fumarate SD H H succinate SCS H SCoA Succinyl-CoA SCoA acetyl-coa H CS ACL H H H H H H citrate H H aconitase α-ketoglutarate αkgd H D-isocitrate H IDH H GDH H lipids SCoA acetyl-coa NH 2 H L-glutamate H H H L-malate H MD H H H H oxaloacetate H H glutaminase H FH H 2 N H fumarate NH 2 H C-1 L-glutamine H ASS ASL H H AAT NH 2 L-aspartate 1

11 Reductive Metabolism of Glutamine [ C 5 N2 ]- Glutamine labeling in Citrate (% of pool) [ C 5 N2 ]- Glutamine labeling in Isocitrate (% of pool) [ C 5 N2 ]- Glutamine labeling in α KG (% of pool) * * DMS Rotenone * DMS Rotenone * Alpha-Ketoglutarate DMS Rotenone Isocitrate * Citrate M+ M+1 M+2 M+3 M+4 M+5 M+6 M+ M+1 M+2 M+3 M+4 M+5 M+6 * * M+ M+1 M+2 M+3 M+4 M+5 Isotopomer * * H citrate H aconitase α-ketoglutarate H H H GDH H D-isocitrate H IDH H lipids H H [ C 5 N2 ]- Glutamine labeling in Acetyl CoA (% of pool) SCoA acetyl-coa H NH 2 H L-glutamate H H H ACL H H H H glutaminase Acetyl CoA DMS Rotenone M+ M+1 M+2 H H 2 N Isotopomer NH 2 H C-1 L-glutamine * 11

12 Glutamine Support Palmitoyl-CoA Synthesis [ C 5 N2 ]- Glutamine % labeling in Palmitoyl CoA * M+2 M+4 M+6 * Isotopomer DMS Rotenone 12

13 Wider Metabolic Perturbations Rotenone Metabolites D-Panthethine 13

14 Moving to New Models- Platelets Basu, et al. Bioanalysis Worth, et al. In Preparation 14

15 Conclusions Rotenone Association with Parkinson s Metabolic compensation from multiple sources revealed through acyl- CoA analysis Absolute quantitation has failings Tracer studies to show relative contributions from different carbon sources Lipid synthesis and β-oxidation? 15

16 Summary Future Directions Toxicological/pharmacological mechanisms of action Connect to wider metabolism Better model systems for disease relevance Cause or consequence? ther mitochondrial complex inhibitors xidative stress inducing exposures Metabolic rescue 16

17 Acknowledgements Dr. Ian A. Blair Andrew Worth Dr. Clementina Mesaros Dr. Qingqing Wang Dr. Sankha Bobby Basu Christine Shwed Dr. Xiaojing Liu Dr. Stacy Gelhaus Alejandro, Linda, Sonia, Zinan Dr. Suhong Zhang CEET Lynch Lab Brass Lab Dr. Peisong Ma Funding Wharton Innovation Fund NIH Grants R1-CA to IAB T32-GM-876 P42-ES-2372 Superfund 17

Citric Acid Cycle: Central Role in Catabolism. Entry of Pyruvate into the TCA cycle

Citric Acid Cycle: Central Role in Catabolism. Entry of Pyruvate into the TCA cycle Citric Acid Cycle: Central Role in Catabolism Stage II of catabolism involves the conversion of carbohydrates, fats and aminoacids into acetylcoa In aerobic organisms, citric acid cycle makes up the final

More information

TCA CYCLE (Citric Acid Cycle)

TCA CYCLE (Citric Acid Cycle) TCA CYCLE (Citric Acid Cycle) TCA CYCLE The Citric Acid Cycle is also known as: Kreb s cycle Sir Hans Krebs Nobel prize, 1953 TCA (tricarboxylic acid) cycle The citric acid cycle requires aerobic conditions!!!!

More information

Chem 109 C. Fall Armen Zakarian Office: Chemistry Bldn 2217

Chem 109 C. Fall Armen Zakarian Office: Chemistry Bldn 2217 Chem 109 C Fall 2014 Armen Zakarian ffice: Chemistry Bldn 2217 Chapter 25 o Glycolysis : fates of pyruvate NADH, H + H + C 2 NADH, H + H - (S)-lactic acid lactate dehydrogenase; anaerobic conditions -

More information

SIMPLE BASIC METABOLISM

SIMPLE BASIC METABOLISM SIMPLE BASIC METABOLISM When we eat food such as a tuna fish sandwich, the polysaccharides, lipids, and proteins are digested to smaller molecules that are absorbed into the cells of our body. As these

More information

Tutorial 27: Metabolism, Krebs Cycle and the Electron Transport Chain

Tutorial 27: Metabolism, Krebs Cycle and the Electron Transport Chain Tutorial 27: Metabolism, Krebs Cycle and the Electron Transport Chain Goals: To be able to describe the overall catabolic pathways for food molecules. To understand what bonds are hydrolyzed in the digestion

More information

Lecture 16. Finish lipid metabolism (Triglycerides, Isoprenoids/Steroids, Glyoxylate cycle) Amino acid metabolism (Urea cycle) Google Man III

Lecture 16. Finish lipid metabolism (Triglycerides, Isoprenoids/Steroids, Glyoxylate cycle) Amino acid metabolism (Urea cycle) Google Man III Lecture 16 Finish lipid metabolism (Triglycerides, Isoprenoids/Steroids, Glyoxylate cycle) Amino acid metabolism (Urea cycle) Google Man III The Powertrain of Human Metabolism (verview) CARBHYDRATES PRTEINS

More information

Lecture 16. Finish lipid metabolism (Triglycerides, Isoprenoids/Steroids, Glyoxylate cycle) Amino acid metabolism (Urea cycle) Google Man III

Lecture 16. Finish lipid metabolism (Triglycerides, Isoprenoids/Steroids, Glyoxylate cycle) Amino acid metabolism (Urea cycle) Google Man III Lecture 16 Finish lipid metabolism (Triglycerides, Isoprenoids/Steroids, Glyoxylate cycle) Amino acid metabolism (Urea cycle) Google Man III The Powertrain of Human Metabolism (verview) CARBHYDRATES PRTEINS

More information

Find this material useful? You can help our team to keep this site up and bring you even more content consider donating via the link on our site.

Find this material useful? You can help our team to keep this site up and bring you even more content consider donating via the link on our site. Find this material useful? You can help our team to keep this site up and bring you even more content consider donating via the link on our site. Still having trouble understanding the material? Check

More information

Citric acid cycle. Tomáš Kučera.

Citric acid cycle. Tomáš Kučera. itric acid cycle Tomáš Kučera tomas.kucera@lfmotol.cuni.cz Department of Medical hemistry and linical Biochemistry 2nd Faculty of Medicine, harles University in Prague and Motol University Hospital 2017

More information

Nafith Abu Tarboush DDS, MSc, PhD

Nafith Abu Tarboush DDS, MSc, PhD Nafith Abu Tarboush DDS, MSc, PhD natarboush@ju.edu.jo www.facebook.com/natarboush Why do we need it? Location & where is it in the picture? Electron (energy) carrying molecules Components Enzymes & cofactors

More information

doi: /nature10642

doi: /nature10642 doi:10.1038/nature10642 Supplementary Fig. 1. Citric acid cycle (CAC) metabolism in WT 143B and CYTB 143B cells. a, Proliferation of WT 143B and CYTB 143B cells. Doubling times were 28±1 and 33±2 hrs for

More information

Krebs cycle Energy Petr Tůma Eva Samcová

Krebs cycle Energy Petr Tůma Eva Samcová Krebs cycle Energy - 215 Petr Tůma Eva Samcová Overview of Citric Acid Cycle Key Concepts The citric acid cycle (Krebs cycle) is a multistep catalytic process that converts acetyl groups derived from carbohydrates,

More information

Fate of Dietary Protein

Fate of Dietary Protein Fate of Dietary Protein Dietary protein Stomach: l, pepsin Denatured and partially hydrolyzed protein (large polypeptides) small intestine: proteases Amino acids and dipeptides intestinal lining: proteases

More information

Amino Acid Metabolism

Amino Acid Metabolism Amino Acid Metabolism Fate of Dietary Protein Dietary protein Stomach: l, pepsin Denatured and partially hydrolyzed protein (large polypeptides) small intestine: proteases Amino acids and dipeptides intestinal

More information

Biochemistry: A Short Course

Biochemistry: A Short Course Tymoczko Berg Stryer Biochemistry: A Short Course First Edition CHAPTER 19 Harvesting Electrons from the Cycle 2013 W. H. Freeman and Company Chapter 19 Outline The citric acid cycle oxidizes the acetyl

More information

Secondary Energy Deficiencies in Organic Acidemias. Kimberly A Chapman MD PhD Children s National July 26, 2014

Secondary Energy Deficiencies in Organic Acidemias. Kimberly A Chapman MD PhD Children s National July 26, 2014 Secondary Energy Deficiencies in Organic Acidemias Kimberly A Chapman MD PhD Children s National July 26, 2014 2 Goals of this talk Describe the secondary energy deficiencies seen in organic acidemias

More information

Chemical reactions in metabolism. Eva Samcová Petr Tůma

Chemical reactions in metabolism. Eva Samcová Petr Tůma Chemical reactions in metabolism Eva Samcová Petr Tůma METABOLISM Living organisms are not at equilibrium. They require a continuous influx of free energy. Overall process through which living systems

More information

Using the Organic Acids Test Part 5 Dr. Jeff Moss

Using the Organic Acids Test Part 5 Dr. Jeff Moss Using organic acids to resolve chief complaints and improve quality of life in chronically ill patients Part V Jeffrey Moss, DDS, CNS, DACBN jeffmoss@mossnutrition.com 413-530-08580858 (cell) 1 Summer

More information

Cellular Respiration Stage 2 & 3. Glycolysis is only the start. Cellular respiration. Oxidation of Pyruvate Krebs Cycle.

Cellular Respiration Stage 2 & 3. Glycolysis is only the start. Cellular respiration. Oxidation of Pyruvate Krebs Cycle. Cellular Respiration Stage 2 & 3 Oxidation of Pyruvate Krebs Cycle AP 2006-2007 Biology Glycolysis is only the start Glycolysis glucose pyruvate 6C 2x 3C Pyruvate has more energy to yield 3 more C to strip

More information

Ahmad Ulnar. Faisal Nimri ... Dr.Faisal

Ahmad Ulnar. Faisal Nimri ... Dr.Faisal 24 Ahmad Ulnar Faisal Nimri... Dr.Faisal Fatty Acid Synthesis - Occurs mainly in the Liver (to store excess carbohydrates as triacylglycerols(fat)) and in lactating mammary glands (for the production of

More information

Chapter 17 - Citric Acid Cycle

Chapter 17 - Citric Acid Cycle hapter 17 - itric Acid ycle I. Introduction - The citric acid cycle (A) was elucidated in the 1930's by ans Krebs, who first noticed that oxygen consumption in suspensions of pigeon breast muscle was greatly

More information

Citrate Cycle. Lecture 28. Key Concepts. The Citrate Cycle captures energy using redox reactions

Citrate Cycle. Lecture 28. Key Concepts. The Citrate Cycle captures energy using redox reactions Citrate Cycle Lecture 28 Key Concepts The Citrate Cycle captures energy using redox reactions Eight reactions of the Citrate Cycle Key control points in the Citrate Cycle regulate metabolic flux What role

More information

Marah Bitar. Faisal Nimri ... Nafeth Abu Tarboosh

Marah Bitar. Faisal Nimri ... Nafeth Abu Tarboosh 8 Marah Bitar Faisal Nimri... Nafeth Abu Tarboosh Summary of the 8 steps of citric acid cycle Step 1. Acetyl CoA joins with a four-carbon molecule, oxaloacetate, releasing the CoA group and forming a six-carbon

More information

Respiration. Energy is everything!

Respiration. Energy is everything! Respiration Energy is everything! Tesla was incredible Everyone was intrigued by Tesla Tesla showed that energy does not need to be feared So what does this have to do with twinkies? Everything! Cellular

More information

Integrative Metabolism: Significance

Integrative Metabolism: Significance Integrative Metabolism: Significance Energy Containing Nutrients Carbohydrates Fats Proteins Catabolism Energy Depleted End Products H 2 O NH 3 ADP + Pi NAD + NADP + FAD + Pi NADH+H + NADPH+H + FADH2 Cell

More information

Biochemistry: A Short Course

Biochemistry: A Short Course Tymoczko Berg Stryer Biochemistry: A Short Course Second Edition CHAPTER 30 Amino Acid Degradation and the Urea Cycle 2013 W. H. Freeman and Company In the cytosol of a cell amino groups from amino acids

More information

Yield of energy from glucose

Yield of energy from glucose Paper : Module : 05 Yield of Energy from Glucose Principal Investigator, Paper Coordinator and Content Writer Prof. Ramesh Kothari, Professor Dept. of Biosciences, Saurashtra University, Rajkot - 360005

More information

Lipid metabolism. Degradation and biosynthesis of fatty acids Ketone bodies

Lipid metabolism. Degradation and biosynthesis of fatty acids Ketone bodies Lipid metabolism Degradation and biosynthesis of fatty acids Ketone bodies Fatty acids (FA) primary fuel molecules in the fat category main use is for long-term energy storage high level of energy storage:

More information

CITRIC ACID CYCLE ERT106 BIOCHEMISTRY SEM /19 BY: MOHAMAD FAHRURRAZI TOMPANG

CITRIC ACID CYCLE ERT106 BIOCHEMISTRY SEM /19 BY: MOHAMAD FAHRURRAZI TOMPANG CITRIC ACID CYCLE ERT106 BIOCHEMISTRY SEM 1 2018/19 BY: MOHAMAD FAHRURRAZI TOMPANG Chapter Outline (19-1) The central role of the citric acid cycle in metabolism (19-2) The overall pathway of the citric

More information

Respiration. Energy is everything!

Respiration. Energy is everything! Respiration Energy is everything! Tesla was incredible Everyone was intrigued by Tesla Tesla showed that energy does not need to be feared So what does this have to do with twinkies? Everything! Cellular

More information

Physiology Unit 1 METABOLISM OF LIPIDS AND PROTEINS

Physiology Unit 1 METABOLISM OF LIPIDS AND PROTEINS Physiology Unit 1 METABOLISM OF LIPIDS AND PROTEINS Alternate Fuel Sources When glucose levels are low Proteins and Triglycerides will be metabolized Tissues will use different fuel sources depending on:

More information

Dr. Abir Alghanouchi Biochemistry department Sciences college

Dr. Abir Alghanouchi Biochemistry department Sciences college Dr. Abir Alghanouchi Biochemistry department Sciences college Under aerobic conditions, pyruvate(the product of glycolysis) passes by special pyruvatetransporter into mitochondria which proceeds as follows:

More information

BCH Graduate Survey of Biochemistry

BCH Graduate Survey of Biochemistry BCH 5045 Graduate Survey of Biochemistry Instructor: Charles Guy Producer: Ron Thomas Director: Glen Graham Lecture 50 Slide sets available at: http://hort.ifas.ufl.edu/teach/guyweb/bch5045/index.html

More information

III. Metabolism The Citric Acid Cycle

III. Metabolism The Citric Acid Cycle Department of Chemistry and Biochemistry University of Lethbridge III. Metabolism The Citric Acid Cycle Slide 1 The Eight Steps of the Citric Acid Cycle Enzymes: 4 dehydrogenases (2 decarboxylation) 3

More information

CELLULAR RESPIRATION SUMMARY EQUATION. C 6 H 12 O 6 + O 2 6CO2 + 6H 2 O + energy (ATP) STEPWISE REDOX REACTION

CELLULAR RESPIRATION SUMMARY EQUATION. C 6 H 12 O 6 + O 2 6CO2 + 6H 2 O + energy (ATP) STEPWISE REDOX REACTION CELLULAR RESPIRATION SUMMARY EQUATION C 6 H 12 O 6 + O 2 6CO2 + 6H 2 O + energy (ATP) STEPWISE REDOX REACTION Oxidation: partial or complete loss of electrons Reduction: partial or complete gain of electrons

More information

Objectives By the end of lecture the student should:

Objectives By the end of lecture the student should: Objectives By the end of lecture the student should: Discuss β oxidation of fatty acids. Illustrate α oxidation of fatty acids. Understand ω oxidation of fatty acids. List sources and fates of active acetate.

More information

Citric acid cycle and respiratory chain. Pavla Balínová

Citric acid cycle and respiratory chain. Pavla Balínová Citric acid cycle and respiratory chain Pavla Balínová Mitochondria Structure of mitochondria: Outer membrane Inner membrane (folded) Matrix space (mtdna, ribosomes, enzymes of CAC, β-oxidation of FA,

More information

Chemistry 3503 Final exam April 17, Student s name:

Chemistry 3503 Final exam April 17, Student s name: Chemistry 3503 Final exam April 17, 2008 Student s name: THIS EXAM IS FOR STUDENTS IN D. CRAIG S SECTION. IF YOU ARE IN M. EZE S SECTION THIS EXAM IS NOT FOR YOU. Part I /40 Part II Question 1 /4 Question

More information

BY: RASAQ NURUDEEN OLAJIDE

BY: RASAQ NURUDEEN OLAJIDE BY: RASAQ NURUDEEN OLAJIDE LECTURE CONTENT INTRODUCTION CITRIC ACID CYCLE (T.C.A) PRODUCTION OF ACETYL CoA REACTIONS OF THE CITIRC ACID CYCLE THE AMPHIBOLIC NATURE OF THE T.C.A CYCLE THE GLYOXYLATE CYCLE

More information

Notes CELLULAR RESPIRATION SUMMARY EQUATION C 6 H 12 O 6 + O 2. 6CO 2 + 6H 2 O + energy (ATP) STEPWISE REDOX REACTION

Notes CELLULAR RESPIRATION SUMMARY EQUATION C 6 H 12 O 6 + O 2. 6CO 2 + 6H 2 O + energy (ATP) STEPWISE REDOX REACTION AP BIOLOGY CELLULAR ENERGETICS ACTIVITY #2 Notes NAME DATE HOUR SUMMARY EQUATION CELLULAR RESPIRATION C 6 H 12 O 6 + O 2 6CO 2 + 6H 2 O + energy (ATP) STEPWISE REDOX REACTION Oxidation: partial or complete

More information

Principles and Practice of Mass Isotopomeric MultiOrdinate Spectral Analysis (MIMOSA) to Assess Metabolic Flux"

Principles and Practice of Mass Isotopomeric MultiOrdinate Spectral Analysis (MIMOSA) to Assess Metabolic Flux Principles and Practice of Mass Isotopomeric MultiOrdinate Spectral Analysis (MIMOSA) to Assess Metabolic Flux" Richard G. Kibbey M.D., Ph.D. Associate Professor Departments of Internal Medicine and Cellular

More information

Biochemistry: A Short Course

Biochemistry: A Short Course Tymoczko Berg Stryer Biochemistry: A Short Course Second Edition CHAPTER 30 Amino Acid Degradation and the Urea Cycle 2013 W. H. Freeman and Company Chapter 30 Outline Amino acids are obtained from the

More information

Glycolysis Part 2. BCH 340 lecture 4

Glycolysis Part 2. BCH 340 lecture 4 Glycolysis Part 2 BCH 340 lecture 4 Regulation of Glycolysis There are three steps in glycolysis that have enzymes which regulate the flux of glycolysis These enzymes catalyzes irreversible reactions of

More information

Lecture 29: Membrane Transport and metabolism

Lecture 29: Membrane Transport and metabolism Chem*3560 Lecture 29: Membrane Transport and metabolism Insulin controls glucose uptake Adipose tissue and muscles contain a passive glucose transporter GluT4 which takes up glucose from blood. (This is

More information

7.05 Spring 2004 May 7, Recitation #11

7.05 Spring 2004 May 7, Recitation #11 Recitation #11 ontact Information TA: Victor Sai Recitation: Friday, 3-4pm, 2-132 E-mail: sai@mit.edu ffice ours: Friday, 4-5pm, 2-132 Unit 4 Schedule Recitation/Exam Date Topic Recitation #11 Friday,

More information

Multiple choice: Circle the best answer on this exam. There are 12 multiple choice questions, each question is worth 3 points.

Multiple choice: Circle the best answer on this exam. There are 12 multiple choice questions, each question is worth 3 points. CHEM 4420 Exam 4 Spring 2015 Dr. Stone Page 1 of 6 Name Use complete sentences when requested. There are 120 possible points on this exam. Therefore there are 20 bonus points. Multiple choice: Circle the

More information

Biochemistry Prof. S. Dasgupta Department of Chemistry Indian Institute of Technology Kharagpur. Lecture - 27 Metabolism III

Biochemistry Prof. S. Dasgupta Department of Chemistry Indian Institute of Technology Kharagpur. Lecture - 27 Metabolism III Biochemistry Prof. S. Dasgupta Department of Chemistry Indian Institute of Technology Kharagpur Lecture - 27 Metabolism III In the last step of our metabolism of carbohydrates we are going to consider

More information

Respiration. Organisms can be classified based on how they obtain energy: Autotrophs

Respiration. Organisms can be classified based on how they obtain energy: Autotrophs Respiration rganisms can be classified based on how they obtain energy: Autotrophs Able to produce their own organic molecules through photosynthesis Heterotrophs Live on organic compounds produced by

More information

(A) Urea cycle (B) TCA cycle (C) Glycolysis (D) Pyruvate oxidation (E) Respiratory chain

(A) Urea cycle (B) TCA cycle (C) Glycolysis (D) Pyruvate oxidation (E) Respiratory chain Biochemistry - Problem Drill 15: Citric Acid Cycle No. 1 of 10 1. Which of the following statements is not a metabolic pathway involved in carbohydrate catabolism and ATP production. (A) Urea cycle (B)

More information

Notes CELLULAR RESPIRATION SUMMARY EQUATION C 6 H 12 O 6 + O 2. 6CO 2 + 6H 2 O + energy (ATP) STEPWISE REDOX REACTION

Notes CELLULAR RESPIRATION SUMMARY EQUATION C 6 H 12 O 6 + O 2. 6CO 2 + 6H 2 O + energy (ATP) STEPWISE REDOX REACTION AP BIOLOGY CELLULAR ENERGETICS ACTIVITY #2 Notes NAME DATE HOUR SUMMARY EQUATION CELLULAR RESPIRATION C 6 H 12 O 6 + O 2 6CO 2 + 6H 2 O + energy (ATP) STEPWISE REDOX REACTION Oxidation: partial or complete

More information

Chapter 13 Carbohydrate Metabolism

Chapter 13 Carbohydrate Metabolism Chapter 13 Carbohydrate Metabolism Metabolism of Foods Food is broken down into carbohydrates, lipids, and proteins and sent through catabolic pathways to produce energy. Glycolysis glucose 2 P i 2 ADP

More information

Liquid Chromatography-Mass Spectrometry Analysis of Dysfunctional Mitochondrial Metabolism: Insights into Rotenone Toxicity and Friedreichâ's Ataxia

Liquid Chromatography-Mass Spectrometry Analysis of Dysfunctional Mitochondrial Metabolism: Insights into Rotenone Toxicity and Friedreichâ's Ataxia University of Pennsylvania ScholarlyCommons Publicly Accessible Penn Dissertations 1-1-2015 Liquid Chromatography-Mass Spectrometry Analysis of Dysfunctional Mitochondrial Metabolism: Insights into Rotenone

More information

PHM142 Energy Production + The Mitochondria

PHM142 Energy Production + The Mitochondria PHM142 Energy Production + The Mitochondria 1 The Endosymbiont Theory of Mitochondiral Evolution 1970: Lynn Margulis Origin of Eukaryotic Cells Endosymbiant Theory: the mitochondria evolved from free-living

More information

Module No. # 01 Lecture No. # 19 TCA Cycle

Module No. # 01 Lecture No. # 19 TCA Cycle Biochemical Engineering Prof. Dr. Rintu Banerjee Department of Agricultural and Food Engineering Asst. Prof. Dr. Saikat Chakraborty Department of Chemical Engineering Indian Institute of Technology, Kharagpur

More information

Chapter 9 Overview. Aerobic Metabolism I: The Citric Acid Cycle. Live processes - series of oxidation-reduction reactions. Aerobic metabolism I

Chapter 9 Overview. Aerobic Metabolism I: The Citric Acid Cycle. Live processes - series of oxidation-reduction reactions. Aerobic metabolism I n n Chapter 9 Overview Aerobic Metabolism I: The Citric Acid Cycle Live processes - series of oxidation-reduction reactions Ingestion of proteins, carbohydrates, lipids Provide basic building blocks for

More information

MULTIPLE CHOICE QUESTIONS

MULTIPLE CHOICE QUESTIONS MULTIPLE CHOICE QUESTIONS 1. Which of the following statements concerning anabolic reactions is FALSE? A. They are generally endergonic. B. They usually require ATP. C. They are part of metabolism. D.

More information

Photosynthesis in chloroplasts. Cellular respiration in mitochondria ATP. ATP powers most cellular work

Photosynthesis in chloroplasts. Cellular respiration in mitochondria ATP. ATP powers most cellular work Light energy ECOSYSTEM CO + H O Photosynthesis in chloroplasts Cellular respiration in mitochondria Organic molecules + O powers most cellular work Heat energy 1 becomes oxidized (loses electron) becomes

More information

number Done by Corrected by Doctor F. Al-Khateeb

number Done by Corrected by Doctor F. Al-Khateeb number 23 Done by A. Rawajbeh Corrected by Doctor F. Al-Khateeb Ketone bodies Ketone bodies are used by the peripheral tissues like the skeletal and cardiac muscles, where they are the preferred source

More information

INTRODUCTORY BIOCHEMISTRY. BI 28 Second Midterm Examination April 3, 2007

INTRODUCTORY BIOCHEMISTRY. BI 28 Second Midterm Examination April 3, 2007 INTRODUCTORY BIOCHEMISTRY BI 28 Second Midterm Examination April 3, 2007 Name SIS # Make sure that your name or SIS # is on every page. This is the only way we have of matching you with your exam after

More information

Biological oxidation II. The Cytric acid cycle

Biological oxidation II. The Cytric acid cycle Biological oxidation II The Cytric acid cycle Outline The Cytric acid cycle (TCA tricarboxylic acid) Central role of Acetyl-CoA Regulation of the TCA cycle Anaplerotic reactions The Glyoxylate cycle Localization

More information

Biochemistry: A Short Course

Biochemistry: A Short Course Tymoczko Berg Stryer Biochemistry: A Short Course Second Edition CHAPTER 28 Fatty Acid Synthesis 2013 W. H. Freeman and Company Chapter 28 Outline 1. The first stage of fatty acid synthesis is transfer

More information

Fatty acid breakdown

Fatty acid breakdown Fatty acids contain a long hydrocarbon chain and a terminal carboxylate group. Most contain between 14 and 24 carbon atoms. The chains may be saturated or contain double bonds. The complete oxidation of

More information

Chem 109 C. Fall Armen Zakarian Office: Chemistry Bldn 2217

Chem 109 C. Fall Armen Zakarian Office: Chemistry Bldn 2217 Chem 109 C Fall 2014 Armen Zakarian ffice: Chemistry Bldn 2217 o Catabolism of carbohydrates: 10 reactions of glycolysis Chapter 25 C C 2 C 2 D-glucose α-d-glucopyranose aworth projection α-d-glucopyranose

More information

Midterm 2. Low: 14 Mean: 61.3 High: 98. Standard Deviation: 17.7

Midterm 2. Low: 14 Mean: 61.3 High: 98. Standard Deviation: 17.7 Midterm 2 Low: 14 Mean: 61.3 High: 98 Standard Deviation: 17.7 Lecture 17 Amino Acid Metabolism Review of Urea Cycle N and S assimilation Last cofactors: THF and SAM Synthesis of few amino acids Dietary

More information

Roles of Lipids. principal form of stored energy major constituents of cell membranes vitamins messengers intra and extracellular

Roles of Lipids. principal form of stored energy major constituents of cell membranes vitamins messengers intra and extracellular Roles of Lipids principal form of stored energy major constituents of cell membranes vitamins messengers intra and extracellular = Oxidation of fatty acids Central energy-yielding pathway in animals. O

More information

Midterm 1 (in class) February 1 (next Thur) (bring calculator, log functions) Review Sessions

Midterm 1 (in class) February 1 (next Thur) (bring calculator, log functions) Review Sessions Midterm 1 (in class) February 1 (next Thur) (bring calculator, log functions) Review Sessions MN (1/29): WED (1/31): 212 Veihmeyer, 4-6 p.m. 198 Young, 6-8 p.m. Lecture 7 Pyruvate Dehydrogenase (PD)) omplex

More information

Tricarboxylic Acid Cycle

Tricarboxylic Acid Cycle Tricarboxylic Acid Cycle Overview (Also called KREBS CYCLE, or CITRIC ACID CYCLE ) Occur totally in mitochondria. TCA cycle is an aerobic pathway, bcz O 2 is required as the final electron accepter. Supplies

More information

LIPID METABOLISM. Sri Widia A Jusman Department of Biochemistry & Molecular Biology FMUI

LIPID METABOLISM. Sri Widia A Jusman Department of Biochemistry & Molecular Biology FMUI LIPID METABOLISM Sri Widia A Jusman Department of Biochemistry & Molecular Biology FMUI Lipid metabolism is concerned mainly with fatty acids cholesterol Source of fatty acids from dietary fat de novo

More information

Citrate Cycle Supplemental Reading

Citrate Cycle Supplemental Reading Citrate Cycle Supplemental Reading Key Concepts - The Citrate Cycle captures energy using redox reactions - Eight enzymatic reactions of the Citrate Cycle - Key control points in the citrate cycle regulate

More information

ANSC/NUTR 618 Lipids & Lipid Metabolism

ANSC/NUTR 618 Lipids & Lipid Metabolism I. Overall concepts A. Definitions ANC/NUTR 618 Lipids & Lipid Metabolism 1. De novo synthesis = synthesis from non-fatty acid precursors a. Carbohydrate precursors (glucose, lactate, and pyruvate) b.

More information

AMINO ACID METABOLISM. Sri Widia A Jusman Dept. of Biochemistry & Molecular Biology FMUI

AMINO ACID METABOLISM. Sri Widia A Jusman Dept. of Biochemistry & Molecular Biology FMUI AMINO ACID METABOLISM Sri Widia A Jusman Dept. of Biochemistry & Molecular Biology FMUI Amino acids derived from dietary protein absorbed from intestine through blood taken up by tissues used for biosynthesis

More information

How do we retain emphasis on function?

How do we retain emphasis on function? Systems Biology Systems biology studies biological systems by systematically perturbing them (biologically, genetically, or chemically); monitoring the gene, protein, and informational pathway responses;

More information

Lipid Metabolism. Catabolism Overview

Lipid Metabolism. Catabolism Overview Lipid Metabolism Pratt & Cornely, Chapter 17 Catabolism Overview Lipids as a fuel source from diet Beta oxidation Mechanism ATP production Ketone bodies as fuel 1 High energy More reduced Little water

More information

Vocabulary. Chapter 19: The Citric Acid Cycle

Vocabulary. Chapter 19: The Citric Acid Cycle Vocabulary Amphibolic: able to be a part of both anabolism and catabolism Anaplerotic: referring to a reaction that ensures an adequate supply of an important metabolite Citrate Synthase: the enzyme that

More information

Comparison of catabolic and anabolic pathways

Comparison of catabolic and anabolic pathways Comparison of catabolic and anabolic pathways Three stages of catabolism Glucose Synthesis of compounds e.g. lactose glycolipids Glucose-6-P Pentosephosphate Pathway Glycolysis Glycogenesis Acetyl-CoA

More information

Biosynthesis of Fatty Acids

Biosynthesis of Fatty Acids Biosynthesis of Fatty Acids Fatty acid biosynthesis takes place in the cytosol rather than the mitochondria and requires a different activation mechanism and different enzymes and coenzymes than fatty

More information

Aerobic Respiration. The four stages in the breakdown of glucose

Aerobic Respiration. The four stages in the breakdown of glucose Aerobic Respiration The four stages in the breakdown of glucose 1 I. Aerobic Respiration Why can t we break down Glucose in one step? (Flaming Gummy Bear) Enzymes gently lower the potential energy until

More information

BCH 4054 Spring 2001 Chapter 24 Lecture Notes

BCH 4054 Spring 2001 Chapter 24 Lecture Notes BCH 4054 Spring 2001 Chapter 24 Lecture Notes 1 Chapter 24 Fatty Acid Catabolism 2 Fatty Acids as Energy Source Triglycerides yield 37 kj/g dry weight Protein 17 kj/g Glycogen 16 kj/g (even less wet weight)

More information

This is an example outline of 3 lectures in BSC (Thanks to Dr. Ellington for sharing this information.)

This is an example outline of 3 lectures in BSC (Thanks to Dr. Ellington for sharing this information.) This is an example outline of 3 lectures in BSC 2010. (Thanks to Dr. Ellington for sharing this information.) Topic 10: CELLULAR RESPIRATION (lectures 14-16) OBJECTIVES: 1. Know the basic reactions that

More information

Aerobic Fate of Pyruvate. Chapter 16 Homework Assignment. Chapter 16 The Citric Acid Cycle

Aerobic Fate of Pyruvate. Chapter 16 Homework Assignment. Chapter 16 The Citric Acid Cycle Chapter 16 Homework Assignment The following problems will be due once we finish the chapter: 1, 3, 7, 10, 16, 19, 20 Additional Problem: Write out the eight reaction steps of the Citric Acid Cycle, using

More information

6. How Are Fatty Acids Produced? 7. How Are Acylglycerols and Compound Lipids Produced? 8. How Is Cholesterol Produced?

6. How Are Fatty Acids Produced? 7. How Are Acylglycerols and Compound Lipids Produced? 8. How Is Cholesterol Produced? Lipid Metabolism Learning bjectives 1 How Are Lipids Involved in the Generationand Storage of Energy? 2 How Are Lipids Catabolized? 3 What Is the Energy Yield from the xidation of Fatty Acids? 4 How Are

More information

Photosynthesis in chloroplasts CO2 + H2O. Cellular respiration in mitochondria ATP. powers most cellular work. Heat energy

Photosynthesis in chloroplasts CO2 + H2O. Cellular respiration in mitochondria ATP. powers most cellular work. Heat energy Figure 9-01 LE 9-2 Light energy ECOSYSTEM Photosynthesis in chloroplasts CO2 + H2O Cellular respiration in mitochondria Organic + O molecules 2 powers most cellular work Heat energy LE 9-UN161a becomes

More information

Sheet #13. #Citric acid cycle made by zaid al-ghnaneem corrected by amer Al-salamat date 11/8/2016. Here we go.. Record #18

Sheet #13. #Citric acid cycle made by zaid al-ghnaneem corrected by amer Al-salamat date 11/8/2016. Here we go.. Record #18 1 Sheet #13 #Citric acid cycle made by zaid al-ghnaneem corrected by amer Al-salamat date 11/8/2016 Here we go.. Record #18 2 Three processes play central role in aerobic metabolism: 1) The citric acid

More information

Metabolism of amino acids. Vladimíra Kvasnicová

Metabolism of amino acids. Vladimíra Kvasnicová Metabolism of amino acids Vladimíra Kvasnicová Classification of proteinogenic AAs -metabolic point of view 1) biosynthesis in a human body nonessential (are synthesized) essential (must be present in

More information

number Done by Corrected by Doctor Nafeth Abu Tarboush

number Done by Corrected by Doctor Nafeth Abu Tarboush number 7 Done by حسام أبو عوض Corrected by Shahd Alqudah Doctor Nafeth Abu Tarboush 1 P a g e As we have studied before, in the fourth reaction of the Krebs cycle, α- ketoglutarate is converted into Succinyl-CoA

More information

Tricarboxylic Acid Cycle. TCA Cycle; Krebs Cycle; Citric Acid Cycle

Tricarboxylic Acid Cycle. TCA Cycle; Krebs Cycle; Citric Acid Cycle Tricarboxylic Acid ycle TA ycle; Krebs ycle; itric Acid ycle The Bridging Step: Pyruvate D hase O H 3 - - pyruvate O O - NAD + oash O 2 NADH O H 3 - - S - oa acetyl oa Pyruvate D hase omplex Multienzyme

More information

The Krebs cycle is a central pathway for recovering energy from three major metabolites: carbohydrates, fatty acids, and amino acids.

The Krebs cycle is a central pathway for recovering energy from three major metabolites: carbohydrates, fatty acids, and amino acids. Chapter 16 - Citric Acid Cycle TCA (tricarboxylic acid cycle) Citric acid cycle and Krebs cycle. Named after Sir Hans Krebs, Nobel Laureate. He worked as an assistant professor for Otto Warburg (Nobel

More information

Biology 638 Biochemistry II Exam-3. (Note that you are not allowed to use any calculator)

Biology 638 Biochemistry II Exam-3. (Note that you are not allowed to use any calculator) Biology 638 Biochemistry II Exam-3 (Note that you are not allowed to use any calculator) 1. In the non-cyclic pathway, electron pathway is. Select the most accurate one. a. PSII PC Cyt b 6 f PC PSI Fd-NADP

More information

III. 6. Test. Respiració cel lular

III. 6. Test. Respiració cel lular III. 6. Test. Respiració cel lular Chapter Questions 1) What is the term for metabolic pathways that release stored energy by breaking down complex molecules? A) anabolic pathways B) catabolic pathways

More information

Chapter 13 - TCA Cycle

Chapter 13 - TCA Cycle Chapter 13 TCA Cycle The third fate of glucose/pyruvate is complete oxidation to C 2 + H 2 in the matrix of the mitochondrion. The 1 st step is the oxidation and decarboxylation of pyruvate to AcetylCoA,

More information

Pathway overview. Glucose + 2NAD + + 2ADP +2Pi 2NADH + 2pyruvate + 2ATP + 2H 2 O + 4H +

Pathway overview. Glucose + 2NAD + + 2ADP +2Pi 2NADH + 2pyruvate + 2ATP + 2H 2 O + 4H + Glycolysis Glycolysis The conversion of glucose to pyruvate to yield 2ATP molecules 10 enzymatic steps Chemical interconversion steps Mechanisms of enzyme conversion and intermediates Energetics of conversions

More information

Cellular Respiration What are the four phases of cellular Respiration?

Cellular Respiration What are the four phases of cellular Respiration? Cellular Respiration What are the four phases of cellular Respiration? All cells need energy all the time, and their primary source of energy is ATP. The methods cells use to make ATP vary depending on

More information

Fatty acids synthesis

Fatty acids synthesis Fatty acids synthesis The synthesis start from Acetyl COA the first step requires ATP + reducing power NADPH! even though the oxidation and synthesis are different pathways but from chemical part of view

More information

CH395G FINAL (3 rd ) EXAM Kitto/Hackert - Fall 2003

CH395G FINAL (3 rd ) EXAM Kitto/Hackert - Fall 2003 CH395G FINAL (3 rd ) EXAM Kitto/Hackert - Fall 2003 1. A cell in an active, catabolic state has a. a high (ATP/ADP) and a high (NADH/NAD + ) ratio b. a high (ATP/ADP) and a low (NADH/NAD + ) ratio c. a

More information

Biochemistry: A Short Course

Biochemistry: A Short Course Tymoczko Berg Stryer Biochemistry: A Short Course Second Edition CHAPTER 27 Fatty Acid Degradation Dietary Lipid (Triacylglycerol) Metabolism - In the small intestine, fat particles are coated with bile

More information

number Done by Corrected by Doctor Faisal Al-Khatib

number Done by Corrected by Doctor Faisal Al-Khatib number 22 Done by Baraa Ayed Corrected by Yaseen Fatayer Doctor Faisal Al-Khatib 1 P a g e Today we are going to cover these concepts: Oxidation of odd number fatty acids Oxidation of very long fatty acids

More information

Amino Acid Oxidation and the Urea Cycle

Amino Acid Oxidation and the Urea Cycle Amino Acid Oxidation and the Urea Cycle Amino Acids: Final class of biomolecules whose oxidation contributes significantly to the generation of energy Undergo oxidation in three metabolic circumstances

More information

PROTEIN METABOLISM: SPECIFIC WAYS OF AMINO ACIDS CATABOLISM AND SYNTHESIS

PROTEIN METABOLISM: SPECIFIC WAYS OF AMINO ACIDS CATABOLISM AND SYNTHESIS PROTEIN METABOLISM: SPECIFIC WAYS OF AMINO ACIDS CATABOLISM AND SYNTHESIS SPECIFIC WAYS OF AMINO ACID CATABOLISM After removing of amino group the carbon skeletons of amino acids are transformed into metabolic

More information

CH 7: Cell Respiration and Fermentation Overview. Concept 7.1: Catabolic pathways yield energy by oxidizing organic fuels

CH 7: Cell Respiration and Fermentation Overview. Concept 7.1: Catabolic pathways yield energy by oxidizing organic fuels CH 7: Cell Respiration and Fermentation Overview Living cells require energy from outside sources Some animals obtain energy by eating plants, and some animals feed on other organisms Energy flows into

More information