W/T Itgam -/- F4/80 CD115. F4/80 hi CD115 + F4/80 + CD115 +

Similar documents
Supplemental Figure 1. Signature gene expression in in vitro differentiated Th0, Th1, Th2, Th17 and Treg cells. (A) Naïve CD4 + T cells were cultured

Supplementary Figure 1. Characterization of basophils after reconstitution of SCID mice

Intracellular MHC class II molecules promote TLR-triggered innate. immune responses by maintaining Btk activation

The encephalitogenicity of TH17 cells is dependent on IL-1- and IL-23- induced production of the cytokine GM-CSF

Supplemental Materials for. Effects of sphingosine-1-phosphate receptor 1 phosphorylation in response to. FTY720 during neuroinflammation

SUPPLEMENTARY INFORMATION

Supplementary Figure 1.

Supplementary Fig. 1 p38 MAPK negatively regulates DC differentiation. (a) Western blot analysis of p38 isoform expression in BM cells, immature DCs

Supplementary Figure 1. IL-12 serum levels and frequency of subsets in FL patients. (A) IL-12

Supplementary Figure 1 Protease allergens induce IgE and IgG1 production. (a-c)

% of live splenocytes. STAT5 deletion. (open shapes) % ROSA + % floxed

Cell isolation. Spleen and lymph nodes (axillary, inguinal) were removed from mice

Supplemental Figure 1

and follicular helper T cells is Egr2-dependent. (a) Diagrammatic representation of the

Nature Medicine doi: /nm.3957

D CD8 T cell number (x10 6 )

Blocking antibodies and peptides. Rat anti-mouse PD-1 (29F.1A12, rat IgG2a, k), PD-

Supplementary Information. Tissue-wide immunity against Leishmania. through collective production of nitric oxide

SUPPLEMENTARY INFORMATION

Supplementary Figure 1. Efficient DC depletion in CD11c.DOG transgenic mice

Supplementary Figure 1. Normal T lymphocyte populations in Dapk -/- mice. (a) Normal thymic development in Dapk -/- mice. Thymocytes from WT and Dapk

Supporting Information Table of Contents

Therapeutic effect of baicalin on experimental autoimmune encephalomyelitis. is mediated by SOCS3 regulatory pathway

Supplementary Figure 1. mrna expression of chitinase and chitinase-like protein in splenic immune cells. Each splenic immune cell population was

Supplementary Figures

SUPPLEMENTARY MATERIAL

Supplementary Figure S1. Flow cytometric analysis of the expression of Thy1 in NH cells. Flow cytometric analysis of the expression of T1/ST2 and

Supplemental Table I.

Crucial role for human Toll-like receptor 4 in the development of contact allergy to nickel

Supplemental Information. CD4 + CD25 + Foxp3 + Regulatory T Cells Promote. Th17 Cells In Vitro and Enhance Host Resistance

Supplementary Figure 1. Antibiotic partially rescues mice from sepsis. (ab) BALB/c mice under CLP were treated with antibiotic or PBS.

Spleen. mlns. E Spleen 4.1. mlns. Spleen. mlns. Mock 17. Mock CD8 HIV-1 CD38 HLA-DR. Ki67. Spleen. Spleen. mlns. Cheng et al. Fig.

Supplementary Figure 1. Deletion of Smad3 prevents B16F10 melanoma invasion and metastasis in a mouse s.c. tumor model.

SUPPLEMENTARY INFORMATION

Supplementary Figure 1: Expression of NFAT proteins in Nfat2-deleted B cells (a+b) Protein expression of NFAT2 (a) and NFAT1 (b) in isolated splenic

Hua Tang, Weiping Cao, Sudhir Pai Kasturi, Rajesh Ravindran, Helder I Nakaya, Kousik

Bead Based Assays for Cytokine Detection

<10. IL-1β IL-6 TNF + _ TGF-β + IL-23

Supplementary Figure 1. BMS enhances human T cell activation in vitro in a

Supplementary Figure S1. PTPN2 levels are not altered in proliferating CD8+ T cells. Lymph node (LN) CD8+ T cells from C57BL/6 mice were stained with

MATERIALS AND METHODS. Neutralizing antibodies specific to mouse Dll1, Dll4, J1 and J2 were prepared as described. 1,2 All

Optimizing Intracellular Flow Cytometry:

Supplementary Figure Legends. group) and analyzed for Siglec-G expression utilizing a monoclonal antibody to Siglec-G (clone SH2.1).

Supplemental Information. T Cells Enhance Autoimmunity by Restraining Regulatory T Cell Responses via an Interleukin-23-Dependent Mechanism

Supplementary Table 1 Clinicopathological characteristics of 35 patients with CRCs

Nature Immunology: doi: /ni Supplementary Figure 1. Cellularity of leukocytes and their progenitors in naive wild-type and Spp1 / mice.

Akt and mtor pathways differentially regulate the development of natural and inducible. T H 17 cells

well for 2 h at rt. Each dot represents an individual mouse and bar is the mean ±

Supplementary Materials for

IL-6Rα IL-6RαT-KO KO. IL-6Rα f/f bp. f/f 628 bp deleted 368 bp. 500 bp

Dendritic cells in cancer immunotherapy Aimin Jiang

Human Immunodeficiency Virus Type-1 Myeloid Derived Suppressor Cells Inhibit Cytomegalovirus Inflammation through Interleukin-27 and B7-H4

Canberra, Australia). CD11c-DTR-OVA-GFP (B6.CD11c-OVA), B6.luc + and. Cancer Research Center, Germany). B6 or BALB/c.FoxP3-DTR-GFP mice were

Supplemental Figure 1. Protein L

Supporting Information

Supplementary Materials for

Supplementary table I. Real-time primers used in the study. The fold change was obtained by

Supplementary Figures

Tbk1-TKO! DN cells (%)! 15! 10!

a surface permeabilized

Title of file for HTML: Supplementary Information Description: Supplementary Figures and Supplementary Table

Supplementary Figure 1. NAFL enhanced immunity of other vaccines (a) An over-the-counter, hand-held non-ablative fractional laser (NAFL).

Supplementary Fig. 1 No relative growth advantage of Foxp3 negative cells.

CD4 + T cells recovered in Rag2 / recipient ( 10 5 ) Heart Lung Pancreas

B6/COLODR/SPL/11C/83/LAP/#2.006 B6/COLODR/SPL/11C/86/LAP/#2.016 CD11C B6/COLODR/SPL/11C/80/LAP/#2.011 CD11C

Nature Immunology: doi: /ni Supplementary Figure 1. Gene expression profile of CD4 + T cells and CTL responses in Bcl6-deficient mice.

SUPPLEMENTARY INFORMATION

Figure S1. Western blot analysis of clathrin RNA interference in human DCs Human immature DCs were transfected with 100 nm Clathrin SMARTpool or

Supplemental Materials

NK cell flow cytometric assay In vivo DC viability and migration assay

Optimizing Intracellular Flow Cytometry

Eosinophils are required. for the maintenance of plasma cells in the bone marrow

Supplementary Figures

Supplementary Materials for

SUPPLEMENTARY INFORMATION

Supplementary Figure S I: Effects of D4F on body weight and serum lipids in apoe -/- mice.

Supplementary Figure 1. Generation of knockin mice expressing L-selectinN138G. (a) Schematics of the Sellg allele (top), the targeting vector, the

Supplementary Figure 1. Expression of EPO and EPOR during self-limited versus delayed

VISTA, a novel immune checkpoint protein ligand that suppresses anti-tumor tumor T cell responses. Li Wang. Dartmouth Medical School

IL-1b Promotes TGF-b1 and IL-2 Dependent Foxp3 Expression in Regulatory T Cells

sequences of a styx mutant reveals a T to A transversion in the donor splice site of intron 5

A Slfn2 mutation causes lymphoid and myeloid immunodeficiency due to loss of immune cell quiescence

Combined Rho-kinase inhibition and immunogenic cell death triggers and propagates immunity against cancer

Supplementary Materials for

Supplementary Figure 1. Double-staining immunofluorescence analysis of invasive colon and breast cancers. Specimens from invasive ductal breast

Bezzi et al., Supplementary Figure 1 *** Nature Medicine: doi: /nm Pten pc-/- ;Zbtb7a pc-/- Pten pc-/- ;Pml pc-/- Pten pc-/- ;Trp53 pc-/-

Integrin CD11b negatively regulates TLR-triggered inflammatory responses by. activating Syk and promoting MyD88 and TRIF degradation via cbl-b

Electron micrograph of phosphotungstanic acid-stained exosomes derived from murine

Supplementary. presence of the. (c) mrna expression. Error. in naive or

Supplementary Figure 1. Efficiency of Mll4 deletion and its effect on T cell populations in the periphery. Nature Immunology: doi: /ni.

Supplementary information. The proton-sensing G protein-coupled receptor T-cell death-associated gene 8

- 1 - Cell types Monocytes THP-1 cells Macrophages. LPS Treatment time (Hour) IL-6 level (pg/ml)

Supplementary Figure 1. ETBF activate Stat3 in B6 and Min mice colons

Supplementary Information

NKTR-255: Accessing The Immunotherapeutic Potential Of IL-15 for NK Cell Therapies

Supplementary Figure 1. Ex vivo IFNγ production by Tregs. Nature Medicine doi: /nm % CD127. Empty SSC 98.79% CD25 CD45RA.

Supplementary Figure S1: Alignment of CD28H. (a) Alignment of human CD28H with other known B7 receptors. (b) Alignment of CD28H orthologs.

Supplement Material. Spleen weight (mg) LN cells (X106) Acat1-/- Acat1-/- Mouse weight (g)

Supplemental Table 1. Primer sequences for transcript analysis

A mechanism for glycoconjugate vaccine activation of the adaptive immune system and its implications for vaccine design

Transcription:

F4/8 % in the peritoneal lavage 6 4 2 p=.15 n.s p=.76 CD115 F4/8 hi CD115 + F4/8 + CD115 + F4/8 hi CD115 + F4/8 + CD115 + MHCII MHCII Supplementary Figure S1. CD11b deficiency affects the cellular responses to thigolycolate. Peritoneal cells were harvested from or mice 4 days after thioglycolate injection. Representative flow cytometry profiles of F4/8 and CD115 staining on peritoneal cells. Histogram showing the MHCII expression on different MF subpopulations (F4/8 hi /CD115 + and F4/8 + /CD115 + ) and their respective percentage (mean ±S.E.M, n=3) in the peritoneal lavage from and mice. p<.5 (t-test).

RANTES (ng/ml) RANTES (ng/ml) RANTES (ng/ml) IL-6 (pg/ml) IL-6 (pg/ml) IL-6 (pg/ml) a 2 MHCII 75 5 CD8 2 CD86 1 1 25 GM-A GM-F GM/IL-4 GM-A GM-F GM/IL-4 GM-A GM-F GM/IL-4 4 3 CD4 15 1 TLR4 3 2 CD14 2 1 5 1 GM-A GM-F GM/IL-4 GM-A GM-F GM/IL-4 GM-A GM-F GM/IL-4 b GM-CSF derived adherent cells (GM-A) 5 4 3 2 p=.2 p=.2 5 4 3 2 GM-CSF derived floating cells (GM-F) p=.392 p=.193 p=.83 2 1 GM-CSF/IL-4 derived (GM/IL-4) p=.7 p=.8 p=.87 1 1 3 2 1 1 1 1 (ng/ml) 6 4 2 1 1 1 (ng/ml) p=.36 p=.44 p=.29 5 4 3 2 1 1 1 (ng/ml) p=.11 p=.438 p=.163 1 c 4 3 1 1 1 (ng/ml) TLR4 11 1 9 8 7 1 1 1 (ng/ml) CD14 1 1 1 (ng/ml) 2 3 1 2 1 BM-MFs BM-MFs Supplementary Figure S2. CD11b is required for -induced cytokine production by myeloid cells differentiated with GM-CSF alone. Bone marrow cells from or mice were cultured in 16.67ng/ml of GM-CSF. Floating cells (GM-F) and adherent cells (GM-A) were collected at day 6. BM- DCs (GM/IL-4) were also generated. (a) Surface expression of MHC class II, CD8, CD86, CD4, TLR4 and CD14 on unstimulated and BM-derived cells were examined by flow cytometry (=test-isotype control) (mean ±S.E.M, n=3). (b) Cells were then treated with a range of concentrations from 1ng/ml to 1ng/ml. IL-6 and RANTES were measured by ELISA 24hrs later. Pooled data from three independent experiments are presented (mean ±S.E.M, n=9). (c) Surface expression of TLR4 and CD14 on unstimulated and BM-MFs and measured by flow cytometry. Data are expressed as delta mean fluorescent intensity (=test-isotype control) (mean ±S.E.M, n=3). p<.5, p<.1, p<.5 (t-test).

ng/ml ng/ml a Day 5 Day 6 BM-MFs Bone marrow cells + M-CSF + GM-CSF MF GM MF GM/IL4 Stimulate with 1mg/ml Bone marrow cells + GM-CSF + IL-4 b 3 2 F4/8 1 CD11c 75 4 3 MHCII 1 5 25 2 1 c IL-6 p=. 75 3 RANTES p=.121 5 2 25 1 1 2 3 4 1 2 3 4 Supplementary Figure S3. CD11b dependency in responses is restricted to and is a lineage/differentiation effect. (a) Schematic outline of the experimental design: bone marrow cells from and mice were differentiated with M-CSF for 5 days to obtain BM-MFs. The M-CSFcontaining medium was removed at day 5, the wells were washed with PBS and fed with media containing either GM-CSF or GM-CSF plus IL-4. BM cells conventionally differentiated into or BM-MFs were used as controls. On day 6 cells were stimulated with 1mg/ml of for 24hrs. (b) Surface expression of F4/8, CD11c and MHCII on unstimulated and BM-derived cells described in (a). Data are expressed as delta mean fluorescent intensity (=test-isotype control) (mean ±S.E.M, n=3). (c) Production of IL-6 and RANTES by the BM-derived cells described in (a) were measured by ELISA 24hrs after the stimulation. Data represent mean ± S.E.M (n=3) p<.5, p<.1 (t-test).

Counts TLR4 (Sa15-21) Counts TLR4(Sa15-21) Counts TLR4(MTS51) Counts TLR4 (MTS51) a MFs 3 min 9 min MFs 3 min 9 min 4 3 BM- MFs p=.2 p=.5 p=.1 p=.3 2 1 3 9 3 9 TLR4 ( MTS51) time (min) after stimulation DCs 3 min 9 min DCs 3 min 9 min 3 n.s p=.6 p=. n.s p=.46 n.s p=.6 2 1 TLR4 ( MTS51) 3 9 3 9 time (min) after stimulation b MFs 3 min 9 min MFs 3 min 9 min 4 3 p=.8 p=.65 BM- MFs p=.37 p=.13 2 1 3 9 3 9 TLR4 (Sa15-21) time (min) after stimulation DCs 3 min 9 min DCs 3 min 9 min 1 75 p=.17 p=.17 n.s p=.31 n.s p=.53 5 25 3 9 3 9 TLR4 (Sa15-21) time (min) after stimulation Supplementary Figure S4. CD11b is required for -TLR4 binding and the subsequent TLR4 internalization in. or BM-MFs and were treated with (1mg/ml) for the times indicated. (a) Cell were stained with the MTS51 mab, which recognizes only -free TLR4-MD-2 complex, to measure binding. (b) Cells were stained with the Sa15-21 mab that detects the TLR4-MD-2 complex irrespective of the presence of. The loss of surface Sa15-21 staining indicates receptor internalization. Representative histograms are shown. Data are expressed as delta mean fluorescent intensity ( = test isotype control ) (mean ±S.E.M, n=3). p<.5, p<.1,p<.5 (t-test).

Fold of phospho-syk induction Fold of phospho-akt induction MHCII surface staining (fold induction) Counts % of surface CD14 % of surface CD11c Counts % of surface CD14 a MFs MFs b 3 min 1 8 6 9 min 4 2 MFs MFs 3 6 9 CD14 DCs DCs time (min) after stimulation p=.49 1 8 6 p=.14 b 1 8 6 4 2 DCs DCs 4 2 CD14 3 6 9 time (min) after stimulation 3 6 9 time (min) after stimulation c 72 72 3 min 9 min p-syk (tyr-525/526) Total SyK d 4 3 2 p=.145 p=.94 6 p-akt 1 6 3 3 Total Akt 3 min 9 min 3 min 9 min BM-MFs 2 2 1 1 3 45 9 Time (min) 3 45 9 Time (min) Supplementary Figure S5. CD11b contributes to CD14 internalization but not to Akt or Syk phosphorylation in. or BM-MFs and were treated with (1mg/ml) for the times indicated. Surface expression of (a) CD14 or (b) CD11c was measured by flow cytometry. (a,b) Displayed are the of specific receptor staining at each time point ( at time as 1%) (mean ±S.E.M, n=3). Representative histograms are shown. (c) or were left untreated () or treated with (1mg/ml) for the time indicated. The presence of phosphorylated (p-)syk and Akt was examined by western blot. Quantification of band intensity showing the fold increase in phospho-protein levels relative to untreated cells and normalized to total protein levels (mean ±S.E.M, n=3). (d) or BM-MFs and were treated with (1mg/ml) for the times indicated. The fold increase in MHC class II expression was compared to untreated cells (mean ±S.E.M, n=3). p<.5, p<.1 (t-test).

Counts % CD25 + Foxp3 - T cells (gated CD4 + cells) % of CD8 + Uty + cells (gated CD8 + cells) CD4 % IFNg % a TGF-b TGF-b + IL-6 TGF-b + DC TGF-b + DC 14 % of Th17 cells p=.171 11 8 5 IL-17 2 15 % of Foxp3 + cells p=.329 1 Foxp3 b HY peptide HY peptide/ c 75 5 25 ex vivo after in vitro re-stimulation 5 4 p=.262 3 2 CFSE (DC:T ratio = 2:1) 1 ex vivo after in vitro re-stimulation Supplementary Figure S6. CD11b regulates the T cell responses elicited by -primed DCs in vitro and in vivo. (a) Naïve CD4 + T cells were stimulated with plate-bound anti-cd3/cd28 antibodies in the presence of TGF-b (with/without IL-6) or conditioned medium () from -treated or DCs. The percentage of Foxp3 + cells was assessed at day 3. Cells were re-stimulated with PMA and ionomycin in the presence of GolgiSTOP for 5hrs and the percentage of Th17 cells was determined by intracellular staining. Data represent mean ±S.E.M from four independent experiments (p<.5,t-test). (b) Female or mice (n=3) were given twice i.n. 1mg HYDby peptide or peptide plus 3mg. Splenic CD11c + cells, isolated 24hrs later, were co-cultured with Marilyn T cells for 72hrs. Representative flow cytometry histograms of CFSE-labelled Marilyn T cells. (c) HY peptide/ treated and mice that had rejected the male grafts were boosted intraperitoneally with male spleen cells. The mice were sacrificed seven days later and the splenocytes were re-stimulated in vitro with irradiated male splenocytes for 1 week. The percentage of antigen specific CD8 + Uty + and CD4 + CD25 + Foxp3 - T cells were analysed by flow cytometry before (ex vivo) and after the in vitro restimulation. Data represent mean ± S.E.M (n=7) (p<.5,mann-whitney test).

RANTES (ng/ml) RANTES (ng/ml) IL-6 (pg/ml) IL-6 (pg/ml) BM- MFs BM- DCs 4 p=.243 1 3 75 2 5 1 25 + ic3b-coated RBC + ic3b-coated RBC 5 4 p=.42 5 4 3 3 2 2 1 1 + ic3b-coated RBC + ic3b-coated RBC Supplementary Figure S7. ic3b-coated red blood cells (RBC) downregulate -induced cytokine production in BM-MFs but not. Guinea pig RBCs were opsonised with mouse C5-deficient serum to avoid complement lysis and were added to BM-MFs and at a 1:1 ratio (RBC:cells). Cells were then stimulated with 1ng/ml of. The amounts of IL-6 and RANTES secreted were measured by ELISA at 24hr. Data represent mean ± S.E.M (n=3) p<.5, p<.1 (ttest).

a min 3 min 9 min p-p38 13 13 Total p38 13 13 3 min 3 min 13 13 p-erk1/2 p-jnk Total Erl1/2 13 Total JNK 13 3 min 13 p-ikba 13 GAPDH

b min 3 min 9 min 18 min p-p38 13 13 Total p38 13 13 3 min 9 min p-erk1/2 13 13 Total Erl1/2 13 13 3 min 15min 3 min 13 13 p-jnk p-ikba 13 13 Total JNK GAPDH upplementary Figure S8 : (a) BM-MFs (b), full Blots relating to Figure 2.

BM-MFs 3 min 9 min 3 min 9 min P-TBK1 225 15 12 76 225 15 12 76 Total TBK1 225 15 12 76 225 15 12 76 3 min 9 min 3 min 9 min 13 13 P-IRF-3 13 13 Total RF-3 Supplementary Figure S9 : full Blots relating to Figure 5.

P-IRF-3 13 13 Total IRF-3 13 13 9 min Supplementary Figure S1 : full Blots relating to Figure 6.

3 min 9 min p-syk (tyr-525/526) 13 Total Syk 13 3 min 9 min 13 p-akt 13 Total Akt Supplementary Figure S11 : full Blots relating to Supplementary Figure S5.