Use of Genetics to Inform Drug Development of a Novel Treatment for Schizophrenia March 21, 2012 Institute of Medicine: New Paradigms in Drug Discovery Workshop Laura K. Nisenbaum, PhD Translational Medicine, Pharmacogenomics Eli Lilly and Company Indianapolis, Indiana
Why Use Genetics to Guide Drug Development? The drug targets we study are polymorphic The pathways we target are complex The diseases we treat are polygenic & heritable Individual patients have differential response to treatments 2
Can Genetics Inform Drug Development for the Treatment of Schizophrenia? Chronic psychiatric illness with mortality rates that are 2 to 3 times higher than those observed in the general population Even after 5 decades of modern pharmacotherapy, the functional outcomes of schizophrenia remain poor New therapeutic approaches are needed Schizophrenia is highly heritable (~80%), but also highly complex While recent studies have shed light on common and rare variants associated with schizophrenia, a clear understanding of the biological mechanisms that contribute to neuropsychiatric disease does not exist We used knowledge of the drug mechanism to formulate a strategy for discovery of drug-response markers 3
Pomaglumetad Methionil (Pomaglumetad) is an mglu2/3 Agonist Being Developed as a Novel Treatment for Schizophrenia 5-HT Clozapine Other/excitatory input Glu? (-) (-) Glutamatergic/excitatory input (-) GABA PCP (-) mglu2/3 agonist Limbic output There were no specific genetic data at the outset of the program to guide development Any new therapeutic would need to differentiate from available generic and branded competition Optional DNA banking was included in protocols 4
Pomaglumetad Methionil was Observed to be Superior to Placebo in a Proof of Concept Study, HBBD a 15 HBBD Proof of Concept Study 15 HBBD DNA Cohort Change in PANSS total score 10 5 0-5 -10-15 -20-25 ** ** *** *** Pomaglumetad Methionil Olanzapine Placebo *** *** 0 1 2 3 4 Week *** *** LS Means of PANSS Total Change 10 5 0-5 -10-15 -20-25 Pomaglumetad Methionil (71) Olanzapine (79) Placebo (43) 0 1 2 3 4 Week Goals of Pharmacogenetic Program Use candidate gene association study to identify genetic markers associated with treatment response Focus on target and pathway genes NOTE: LY2140023 monohydrate = pomaglumetad methionil Patil ST, et al.. Nat Med 2007;13(9):1102-7. 5
HBBD Candidate Gene Study Discovered Genetic Variants Associated with Pomaglumetad Methionil Response 16 SNPs in HTR2A Associated with Treatment Response in White Caucasians LS Means of PANSS Total Change 15 10 5 0-5 -10-15 -20-25 -30-35 -40 HTR2A SNP rs7330461 Placebo A/A (24) Placebo A/T (14) Placebo T/T (2) Pomaglumetad Methionil A/A (32) Pomaglumated Methionil A/T (29) Pomaglumated Methionil T/T (4) Olanzapine A/A (29) Olanzapine A/T (29) Olanzapine T/T (14) 0 14 28 Day NOTE: LY2140023 monohydrate = pomaglumetad methionil 6
Change in PANSS Total Score Change in PANSS Total Score Genetic Effect of HTR2A SNP rs7330461 Was Also Observed in a Safety Study, HBBR Change in PANSS Total Score in Pomaglumetad Methionil-Treated non-hispanic Caucasians HBBD Proof of Concept Study HBBR Safety Study Week Week NOTE: LY2140023 monohydrate = pomaglumetad methionil 7
Change in PANSS Total Score Comparison Between HTR2A SNP rs7330461 T-Carrier and A/A Genotype Groups in Study HBBR Change in PANSS Total Score in Pomaglumetad Methionil-Treated non-hispanic Caucasians 40 30 20 10 0-10 - 20-30 A/A genotype (n=25) T carrier (n=26) T Carrier Better Response to Pomaglumetad Methionil A/A Reduced Response to Pomaglumetad Methionil - 40 0 1 2 3 4 6 8 12 16 20 24 Week DISCOVER, REPLICATE AND VALIDATE Next Step 8
p-value (-log 10 ) HTR2A SNPs Associated with Drug Response are Intronic and in High Linkage Disequilibrium p = 0.001 PANSS Total p-values associated with treatment response p = 0.01 p = 0.05 NESTED GENE REGION Functional Significance? 9
There are Differences in Linkage Disequilibrium in Distinct Populations White Caucasian African American Access to sufficient samples in different populations is required to understand if the marker is causal or tagging 10
Summary Pomaglumetad Methionil has the potential to be a major advance in the treatment of schizophrenia HTR2A SNP rs7330461 is associated with response to antipsychotic treatment in non-hispanic Caucasians T Allele associated with enhanced response to LY2140023 Future studies will be needed to assess these findings in a larger population and to determine whether similar results will be observed in non-caucasian populations 11
Challenges Limited biological understanding of neuropsychiatric disease does not provide a prior hypothesis for genetic-based drug discovery/ development leads to hypothesis generation in Phase 2 Development of PGx hypothesis in Phase 2 necessitates replication and validation of hypothesis in Phase 3 If genetic biomarker is not causative, underlying genetic structural differences across populations may prevent generalization of genetic marker to other populations If Phase 3 results support the need for a companion diagnostic, timing has the potential to become rate-limiting for drug approval 12