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AD Award Number: W81XWH-06-1-0557 TITLE: The Importance of Autophagy in Breast Cancer Development and Treatment PRINCIPAL INVESTIGATOR: Jin-Ming Yang, Ph.D. CONTRACTING ORGANIZATION: University of Medicine and Dentistry of New Jersey New Brunswick, NJ 08903 REPORT DATE: June 2008 TYPE OF REPORT: Annual PREPARED FOR: U.S. Army Medical Research and Materiel Command Fort Detrick, Maryland 21702-5012 DISTRIBUTION STATEMENT: Approved for Public Release; Distribution Unlimited The views, opinions and/or findings contained in this report are those of the author(s) and should not be construed as an official Department of the Army position, policy or decision unless so designated by other documentation.

REPORT DOCUMENTATION PAGE Form Approved OMB No. 0704-0188 Public reporting burden for this collection of information is estimated to average 1 hour per response, including the time for reviewing instructions, searching existing data sources, gathering and maintaining the data needed, and completing and reviewing this collection of information. Send comments regarding this burden estimate or any other aspect of this collection of information, including suggestions for reducing this burden to Department of Defense, Washington Headquarters Services, Directorate for Information Operations and Reports (0704-0188), 1215 Jefferson Davis Highway, Suite 1204, Arlington, VA 22202-4302. Respondents should be aware that notwithstanding any other provision of law, no person shall be subject to any penalty for failing to comply with a collection of information if it does not display a currently valid OMB control number. PLEASE DO NOT RETURN YOUR FORM TO THE ABOVE ADDRESS. 1. REPORT DATE (DD-MM-YYYY) 01-06-2008 2. REPORT TYPE Annual 3. DATES COVERED (From - To) 16 MAY 2007-15 MAY 2008 4. TITLE AND SUBTITLE 5a. CONTRACT NUMBER The Importance of Autophagy in Breast Cancer Development and Treatment 6. AUTHOR(S) Jin-Ming Yang, Ph.D. E-Mail: jyang@umdnj.edu 5b. GRANT NUMBER W81XWH-06-1-0557 5c. PROGRAM ELEMENT NUMBER 5d. PROJECT NUMBER 5e. TASK NUMBER 5f. WORK UNIT NUMBER 7. PERFORMING ORGANIZATION NAME(S) AND ADDRESS(ES) 8. PERFORMING ORGANIZATION REPORT NUMBER University of Medicine and Dentistry of New Jersey New Brunswick, NJ 08903 9. SPONSORING / MONITORING AGENCY NAME(S) AND ADDRESS(ES) 10. SPONSOR/MONITOR S ACRONYM(S) U.S. Army Medical Research and Materiel Command Fort Detrick, Maryland 21702-5012 11. SPONSOR/MONITOR S REPORT NUMBER(S) 12. DISTRIBUTION / AVAILABILITY STATEMENT Approved for Public Release; Distribution Unlimited 13. SUPPLEMENTARY NOTES 14. ABSTRACT In the current study, we tested the hypothesis that eef-2 kinase plays a critical role in the ability of breast cancer cells to survive growth factor/nutrient deprivation. We found that eef-2 kinase and autophagy were activated following starvation treatment in human breast cancer cells. Nutrient starvation also decreased mtor activity, and reduced the incorporation rate of 35 S-methionine, indicating protein synthesis was inhibited. Silencing of eef-2 kinase by RNAi relieved the inhibition of protein synthesis, and resulted in a greater reduction of cellular ATP. EEF-2 kinase-targeted RNAi also blunted autophagic response of the tumor cells. Inhibition of autophagy by knockdown of eef-2 kinase or autophagy-related gene Beclin-1 impeded cell growth in serum/nutrient-deprived cultures and handicapped cell survival. These results indicate that in response to nutrient/growth factor deprivation breast cancer cells activates eef-2 kinase and autophagy to decrease protein synthesis and regenerate ATP, and that inhibition of eef-2 kinase renders cells continue to elongate peptide, deplete ATP, and impairs cancer cell survival under metabolic stress. Furthermore, we determined whether inhibition of autophagy sensitized breast cancer cells to growth factor antagonists. Synergistic effect on cell growth inhibition was observed from combination of a small molecule EGFR/ErbB-2 inhibitor with an autophagy inhibitor 3-methyladenine (combination index values at ED50 0.6279 and 0.7879, respectively). Inhibition of autophagy by knockdown of eef-2 kinase or Beclin 1 sensitized breast cancer cells to the EGFR/ErbB-2 inhibitor and the mtor inhibitor rapamycin. These results provide new evidence that activation of eef-2 kinase and autophagy plays protective role for cancer cells under metabolic stress, and that targeting autophagic survival may represent a novel approach to sensitizing cancer cells to growth factor antagonists. 15. SUBJECT TERMS Breast cancer; autophagy; elongation factor-2 kinase; growth factor antagonist 16. SECURITY CLASSIFICATION OF: 17. LIMITATION OF ABSTRACT a. REPORT U b. ABSTRACT U 18. NUMBER OF PAGES c. THIS PAGE U UU 17 19a. NAME OF RESPONSIBLE PERSON USAMRMC 19b. TELEPHONE NUMBER (include area code) Standard Form 298 (Rev. 8-98) Prescribed by ANSI Std. Z39.18

Table of Contents Introduction....4 Body.5 Key Research Accomplishments. 6 Reportable Outcomes.6- Conclusions..6 References 7 Appendices 8 3

INTRODUCTION We propose that breast cancer cells utilize autophagy ( self-digestion ) to survive during times of nutrient and/or growth factor deprivation. For example, when cells lack an adequate blood supply, or treatment with drugs that block growth factors, a percentage of cells survive by slowing energy utilization and recycling their own proteins and damaged organelles. These hibernating cells can subsequently be revived when nutrients become available. Therefore, by inhibiting autophagy normal breast cells will be less able to survive malignant transformation and treatment with drugs that block growth factors. Autophagy is a survival process first uncovered in yeast and is now known to be activated in response to nutrient deprivation in plants, worms, flies, mice, and man (1). In yeast, nutrient deprivation results in two outcomes: 1) self-digestion of cytoplasm and organelles and recycling of spare parts (e.g., amino acids) for energy utilization and; 2) the budding of an immortal spore. This response in unicellular organisms leads to selfpreservation in times of famine. Not surprisingly, autophagy finds its counterpart in multicellular organisms, as high up the animal kingdom as man, where nutrient deprivation prompts cells to exit the cell cycle, shrink, digest long-lived proteins and damaged organelles, and recycle the components to maintain cellular energy. To support autophagy, cells must limit further use of energy, and have evolved a pathway to inhibit protein synthesis, the cell s major consumer of energy. Autophagy may thus result in cellular destruction or alternatively cellular hibernation until the supply of nutrients is restored. Despite targeted therapies with selective estrogen receptor modulators (e.g., Tamoxifen), aromatase inhibitors (e.g. Arimidex), and antagonists of Her-2/neu (e.g., Herceptin), the response to these treatments are unacceptably limited. Much remains to be discovered about the mechanisms by which breast cancer cells escape the inhibitory effects of these medications. New and exciting data are emerging in model systems that suggest the possibility that breast cancer cells survive growth factor depletion/inhibition through autophagy. Furthermore, it is possible to inhibit this survival response by targeting one of several promising components of the autophagy pathway. We will test the hypothesis that breast cancer cells survive nutrient/growth factor deprivation through autophagy and that targeting a key component of the autophagy pathway will decrease breast cancer viability. One promising target is an enzyme, eef-2 kinase, which is activated during autophagic survival to inhibit protein synthesis and conserve energy. Our rationale for targeting eef-2 kinase is its: 1) overexpression in human breast cancer; 2) activation during autophagy; 3) ability to inhibit protein synthesis and conserve energy and; 3) unique structure, making this kinase amenable to selective inhibition. By blocking eef-2 kinase in the face of nutrient/growth factor deprivation, protein elongation would continue and deplete critical supplies of energy resulting in cell death. 4

BODY Task 1 To determine the importance of autophagy in the life and death of breast cancer cells. We have been continuing our studies on the roles of eef-2 kinase and autophagy in the response of cancer cells to environmental and metabolic stresss. We further verified that eef-2 kinase and autophagy were activated following starvation treatment in human breast cancer cell lines. Nutrient starvation inhibited mtor activity as evidenced by the decreases of phosphor-s6 kinase and phosphor-4ebp1 (Figure 1C), activated eef-2 kinase as indicated by the increases of phospho-ef-2 (Figure 1A and B), and inhibited protein synthesis (reduced the incorporation rate of 35 S-methionine) (Figure 1D). Nutrient deprivation also caused reduction of cellular ATP content (Figure 2A) and activation of AMP kinase (Figure 2B), and induced autophagic response, as measured by LC3-II turnover (Figure 3A) and GFP-LC3 cleavage (Figure 3B) assays. Silencing of eef-2 kinase by RNA interference (RNAi) relieved the inhibition of protein synthesis (Figure 4B), and resulted in a greater reduction of cellular ATP (Figure 5). eef-2 kinase-targeted RNAi also blunted autophagic response of the tumor cells (Figure 4A). Inhibition of autophagy by knockdown of eef-2 kinase or autophagy-related gene Beclin-1 impeded cell growth in serum/nutrient-deprived cultures and handicapped cell survival (Figure 6). These results indicate that in response to nutrient/growth factor deprivation breast cancer cells activates eef-2 kinase and autophagy to decrease protein synthesis and regenerate ATP, and that inhibition of eef-2 kinase renders cells continue to elongate peptide, deplete ATP, and impairs cancer cell survival under metabolic stress. These results are shown in the Appendix. These observations provide further evidence that eef-2 kinase is activated in response to metabolic stress, and that inhibiting eef-2 kinase may overcome the cellular attempts to survive via autophagic regeneration of ATP. Task 2 To determine the role of autophagy in the sensitivity of breast cancer to treatment. During the last grant we determined the effect of autophagy on the sensitivity of breast cancer cells to small molecule antagonists of growth factor receptor such gefitinib and lapatinib. We showed that treatment of human breast cancer cells, MDA-MB-468, with gefitinib (2.5 M and 5.0 M) and lapatinib (5.0 M and 10 M) activated autophagy (Figure 7), as examined by autophagic flux using GFP-LC3 cleavage assay. We also demonstrated that inhibition of autophagy by autophagy inhibitor, 3-methyladenine (3- MA), enhanced the sensitivity of breast cancer cell lines SKBR3 and MDA-MB-468 to a small molecule EGFR/ErbB-2 inhibitor (combination index values at ED50 0.6279 and 0.7879, respectively) (Table 1). Suppression of autophagy by knockdown of eef-2 kinase expression or autophagy gene Beclin 1 expression also sensitized SKBR3 and MDAMB468 cells to the growth inhibitory effects of EGFR/ErbB-2 inhibitor and the mtor inhibitor rapamycin (Table 2). Furthermore, we showed that silencing of expression of eef-2 kinas and beclin 1 potentiates the growth inhibitory effects of lapatinib and gefitinib on MDA-MB-468 and SKBR3 cells (Table 3). The results of these studies are shown in the Appendix. These results provide new evidence that activation of eef-2 kinase and autophagy plays cyto-protective role for cancer cells under 5

metabolic stress, and that targeting autophagic survival may represent a novel approach to sensitizing cancer cells to growth factor antagonists. KEY RESEARCH ACCOMPLISHMENTS We have validated that eef2 kinase and autophagy are activated in response to nutrient/growth factor deprivation in breast cancer cells. Inhibition of eef2 kinase by RNAi knockdown inhibited autophagy activity. We observed that following nutrient/growth factor deprivation, inhibition of eef2 kinase by RNAi knockdown relieves the inhibition of protein synthesis, and results in a greater and more rapid reduction of cellular ATP in breast cancer cells. We demonstrated that inhibition of autophagy by RNAi knockdown of eef2 kinase or autophagy-related genes handicapps cell survival in serum-deprived cultures. We showed that there is a synergistic effect from combination of growth factor antagonist EGFR/ErbB-2 inhibitor with autophagy inhibitor 3-MA in SKBR3 and MDAMB468 cells. We also found that inhibition of BECN1 or by RNAi knockdown sensitizes MDAMB468 and SKBR3 cells to the treatment of EGFR/ErbB-2 inhibitor lapatinib and EGFR inhibitor gefitinib. Manuscript None REPORTABLE OUTCOMES Abstracts Li HM, Hait WN, Yang JM: Targeting autophagic survival pathway sensitizes human breast cancer cells to growth factor antagonists. Proc Amer Assoc Cancer Res 49: 4935, 2008. Degree obtained that are supported by this award None CONCLUSIONS Targeting eef-2 kinase regulated autophagic survival pathway may stand for a new strategy of sensitizing human breast cancer cells to therapy with growth factor antagonists. 6

REFERENCES 1. Shintani, T. and Klionsky, D. J. Autophagy in health and disease: a double-edged sword. Science, 306: 990-995, 2004. 7

APPENDIX 8

D Protein synthesis activity (%) 120 100 80 60 40 20 0 0 1 2 3 Time (h) Figure 1. Nutrient starvation inhibits mtor/s6 kinase, activates eef-2 kinase, and decreases protein synthesis activity in human breast cancer cells.

A B C 1h 2h ATP level (%) 125 100 75 50 25 p-ef2 EF2 p-ampk AMPK 0 0 2 4 6 8 Time (h) -actin Figure 2. Nutrient starvation decreases cellular ATP level and activates AMP kinase in human breast cancer cells. A C 0.5h 1h B Control Starved LC3 I LC3 II -actin p-ef2 EF2 Figure 3. Nutrient starvation activates autophagy in MCF-7 human breast cancer cells.

A NT B NT sirna p-ef2 EF2 LC3 I LC3 II -actin Protein synthesis activity (%) 120 100 80 60 40 sirna * * Control 0.5 h 1 h 2 h Time of starvation Figure 4. Knockdown of eef-2 kinase expression blunts autophagic response and relieves the Inhibition of protein synthesis following nutrient deprivation.

A NT NT NT B NT sirna 120 sirna -actin p-ef2 EF2 ATP level (%) 100 80 60 40 * MCF7 BT549 MDAMB231 20 Control 1 h 2 h 4 h Time of starvation C D NT sirna NT sirna 120 sirna 120 sirna ATP level (%) 100 80 60 40 ATP level (%) 100 80 60 40 * 20 Control 1 h 2 h 4 h 20 Control 1 h 2 h 4 h Time of starvation Time of starvation Figure 5. Knockdown of eef-2 kinase expression hastens the the decrease of cellular ATP level following nutrient deprivation

A - + B NT BECN1 ATG5 -actin BECN1 Ran LC3 I LC3 II -actin ATG5 C Cell viability (%) 300 NT 250 200 150 100 BECN1 ATG5 NT + 3-MA Ran D Cell viability (%) 120 100 80 60 * NT BECN1 ATG5 NT + 3-MA * * 50 40 0 0 1 2 3 4 5 6 7 8 Time (days) 20 0 1 2 3 Time (days) Figure 6. Silencing of eef-2 kinase or autophagy genes beclin1 and ATG5 impairs survival of human breast cancer cells under metabolic stress.

Gefitinib and Lapatinib Activate Autophagy in MDAMB468 Cells Control Gefitinib 2.5 um Gefitinib 5 um Control Lapatinib 5 um Lapatinib 10 um Figure 7. Treatment of human breast cancer cells with growth factor antagonists induces autophagic response.

Table 1. Inhibition of autophagy by 3-MA enhances the sensitivity of breast cancer cells to the growth-inhibitory effect of a small molecule inhibitor of EGFR/ErbB-2. Numbers shown are combination indices.

Table 2. Silencing of eef-2 kinase expression increases the sensitivity of breast cancer cells to the growth-inhibitory effects of rampamycin and a small molecule inhibitor of EGFR/ErbB-2.

Table 3. Silencing of expression of eef-2 kinase or autophagy gene, beclin1, increases the sensitivity of breast cancer cells to the growth factor antagonists, lapatinib and gefitinib.