Mitochondrial biogenesis and diabetes, functional of confirmation mtdna transcription factors. Chan Bae Park Ajou Univ. School of Medicine

Similar documents
SUPPLEMENTARY INFORMATION

Nature Structural & Molecular Biology: doi: /nsmb Supplementary Figure 1. Generation and validation of mtef4-knockout mice.

Alternative RNA processing: Two examples of complex eukaryotic transcription units and the effect of mutations on expression of the encoded proteins.

DNA codes for RNA, which guides protein synthesis.

Protein Synthesis

PHM142 Energy Production + The Mitochondria

The Blueprint of Life: DNA to Protein. What is genetics? DNA Structure 4/27/2011. Chapter 7

The Blueprint of Life: DNA to Protein

Chemistry 107 Exam 4 Study Guide

RNA (Ribonucleic acid)

Chapter 8 Mitochondria and Cellular Respiration

CELLS. Cells. Basic unit of life (except virus)

Biochemistry 2000 Sample Question Transcription, Translation and Lipids. (1) Give brief definitions or unique descriptions of the following terms:

Reoviruses. Virion. Genome. Genes and proteins. Viruses and hosts. Diseases. Distinctive characteristics

The Organism as a system

Supplementary Fig. S1. Schematic diagram of minigenome segments.

Supplementary Figure 1. SC35M polymerase activity in the presence of Bat or SC35M NP encoded from the phw2000 rescue plasmid.

NBCE Mock Board Questions Biochemistry

CHEM/MBIO 2370 Biochemistry 2: Catabolism, Synthesis and Information Pathways--Syllabus

Genetics. Instructor: Dr. Jihad Abdallah Transcription of DNA

An Introduction to Carbohydrates

The Cell Organelles. Eukaryotic cell. The plasma membrane separates the cell from the environment. Plasma membrane: a cell s boundary

Point total. Page # Exam Total (out of 90) The number next to each intermediate represents the total # of C-C and C-H bonds in that molecule.

RNA Processing in Eukaryotes *

Human Genome: Mapping, Sequencing Techniques, Diseases

PROTEIN SYNTHESIS. It is known today that GENES direct the production of the proteins that determine the phonotypical characteristics of organisms.

MOLECULAR CELL BIOLOGY

Eukaryotic Gene Regulation

An Introduction to Carbohydrates

BIOL 4374/BCHS 4313 Cell Biology Exam #1 February 13, 2001

Translation. Host Cell Shutoff 1) Initiation of eukaryotic translation involves many initiation factors

Genetics and Genomics in Medicine Chapter 6 Questions

Eukaryotic mrna is covalently processed in three ways prior to export from the nucleus:

Structure. Lysosomes are membrane-enclosed organelles. Hydrolytic enzymes. Variable in size & shape need

BIOL212- Biochemistry of Disease. Metabolic Disorders: Diabetes

HORMONES AND CELL SIGNALLING

Chapter 3: Cells. I. Overview

RNA and Protein Synthesis Guided Notes

Retroviruses. ---The name retrovirus comes from the enzyme, reverse transcriptase.

Direct Regulation of Mitochondrial RNA Synthesis by Thyroid Hormone

RNA regulons in Hox 5 UTRs confer ribosome specificity to gene regula=on

Name: Date: Block: Biology 12

Page 32 AP Biology: 2013 Exam Review CONCEPT 6 REGULATION

MicroRNAs, RNA Modifications, RNA Editing. Bora E. Baysal MD, PhD Oncology for Scientists Lecture Tue, Oct 17, 2017, 3:30 PM - 5:00 PM

Maturity-onset diabetes of the young (MODY) is a heterogeneous group

Multi-focal control of mitochondrial gene expression by oncogenic MYC provides potential therapeutic targets in cancer

Convergent and Divergent Mechanisms in Aging and Cancer

The use of mitochondrial nutrients to improve IVF. Robert F Casper MD

Explain that each trna molecule is recognised by a trna-activating enzyme that binds a specific amino acid to the trna, using ATP for energy

Organization of genetic material in eukaryotes

-are poly-hydroxylated aldehydes and ketones -can cyclise -can form polymeric chains

BIOL2005 WORKSHEET 2008

Supporting Information

The functional investigation of the interaction between TATA-associated factor 3 (TAF3) and p53 protein

Bio 111 Study Guide Chapter 17 From Gene to Protein

variant led to a premature stop codon p.k316* which resulted in nonsense-mediated mrna decay. Although the exact function of the C19L1 is still

VIROLOGY. Engineering Viral Genomes: Retrovirus Vectors

Translation Activity Guide

Chapter 14. Energy conversion: Energy & Behavior

SMA IS A SEVERE NEUROLOGICAL DISORDER [1]

The citric acid cycle Sitruunahappokierto Citronsyracykeln

Nature Structural & Molecular Biology: doi: /nsmb Supplementary Figure 1. Differential expression of mirnas from the pri-mir-17-92a locus.

Organelles of the Cell & How They Work Together. Packet #7

Metabolic integration and Regulation

Alternative splicing. Biosciences 741: Genomics Fall, 2013 Week 6

Expanded View Figures

Hand in the Test Sheets (with the checked multiple choice answers) and your Sheets with written answers.

Mild Heat Stress Induces Mitochondrial Biogenesis Associated with Activation of the AMPK- SIRT1-PGC-1α Pathway in C2C12 Myotubes.

Complete Student Notes for BIOL2202

Viral Genetics. BIT 220 Chapter 16

Roles of Lipids. principal form of stored energy major constituents of cell membranes vitamins messengers intra and extracellular

Supplementary Figure 1. DJ-1 modulates ROS concentration in mouse skeletal muscle.

Role of the Pyruvate

Final Review Sessions. 3/16 (FRI) 126 Wellman (4-6 6 pm) 3/19 (MON) 1309 Surge 3 (4-6 6 pm) Office Hours

Expression of acid base transporters in the kidney collecting duct in Slc2a7 -/-

Pre-mRNA has introns The splicing complex recognizes semiconserved sequences

Molecular Biology (BIOL 4320) Exam #2 May 3, 2004

7.012 Quiz 3 Answers

MTB-1 MEDIATED GENE REGULATION SHOWS BENEFICIAL EFFECTS IN DMD PATIENT CELLS AND MDX MICE

EXPANDING THE SET OF KNOWN SUBSTRATES OF NUCLEAR RNASE P. Daniel J Coughlin

TRANSLATION. Translation is a process where proteins are made by the ribosomes on the mrna strand.

Central Dogma. Central Dogma. Translation (mrna -> protein)

Wolff-Parkinson-White Syndrome and PRKAG2

MicroRNA in Cancer Karen Dybkær 2013

Organelles of the Cell & How They Work Together. Packet #5

Alpha thalassemia mental retardation X-linked. Acquired alpha-thalassemia myelodysplastic syndrome

Role of fatty acids in the development of insulin resistance and type 2 diabetes mellitus

Chapter 10. 이화작용 : 에너지방출과보존 (Catabolism: Energy Release and Conservation)

Life Sciences 1A Midterm Exam 2. November 13, 2006

Molecular Cell Biology Problem Drill 16: Intracellular Compartment and Protein Sorting

Nafith Abu Tarboush DDS, MSc, PhD

Picornaviruses. Virion. Genome. Genes and proteins. Viruses and hosts. Diseases. Distinctive characteristics

Student name ID # 2. (4 pts) What is the terminal electron acceptor in respiration? In photosynthesis?

The Manga Guide to Biochemistry 2011 Masaharu Takemura, Kikuyaro, and Office Sawa.

AGING, INSULIN RESISTANCE AND MITOCHONDRIAL FUNCTION. Kitt Falk Petersen, M.D. Yale University School of Medicine

Mitochondria and ATP Synthesis

Epigenetic Control of ENaC

Citric acid cycle and respiratory chain. Pavla Balínová

Organelles of the Cell & How They Work Together. Packet #5

Diabetes in Older Adults

Transcription:

Mitochondrial biogenesis and diabetes, functional of confirmation mtdna transcription factors Chan Bae Park Ajou Univ. School of Medicine

Mitochondria perform diverse functions (Courtesy of K. R. Porter, University of Maryland Baltimore County)

Respiratory chain subunits are encoded in two genomes Complex I Complex II Complex III Complex IV Complex V H + Inner membrane ADP ATP

Respiratory chain subunits are encoded in two genomes

MtDNA mutation cause mitochondrial dysfunction

Human mtdna mutations associated with diabetes Maechler and Wolleim; Nature(2001)

Human mtdna mutations associated with diabetes Park et al; Diabetalogia (2008)

Mammalian mitochondrial DNA (mtdna) HSP 2 rrna 12 mrna 14 trna LSP 1 mrna 8 trna Replication primer

MtDNA expression require nuclear factors

Human mtdna expression factor TFB1M is associated with diabetes Koeck et al; Cell Metab (2010)

MtDNA expression require nuclear factors MtDNA transcription

Transcription of mammalian mtdna

Initiation of mammalian mtdna transcription CSB III II I POLRMT TFAM TFBMs TFBMs TFAM POLRMT F 12S rrna V 16S rrna L POLRMT : mitochondrial RNA polymerase TFAM : mitochondrial transcription factor A TFB1M-2M : mitochondrial transcription factor B1-2 Falkenberg et al.; Nat Genet (2002)

Reconstituted mtdna transcription system CSB TFBM TFAM POLRMT F 12S rrna V 16S rrna L I II I Falkenberg et al.; Nat Genet (2002)

Repression of mammalian mtdna transcription MTERF3 CSB III II I POLRMT TFAM TFBMs TFBMs TFAM POLRMT F 12S rrna V 16S rrna L POLRMT : mitochondrial RNA polymerase TFAM : mitochondrial transcription factor A TFB1M-2M : mitochondrial transcription factor B1-2 MTERF3 : mitochondrial transcription termination factor 3 Park et al.; Cell (2007)

Termination of mammalian mtdna transcription MTERF1

In vivo function of TFB1M

TFB1M is homologous to small rrna methyltransferase - Dimethylation of small rrna is conserved - Important for ribosome assembly

Generation of TFB1M knockout mouse

Cox Loss of TFB1M cause lack of 12S rrna dimethylation TH

Loss of TFB1M cause defect in mitochondrial translation

TFB1M is mitochondrial 12S rrna methyltransferase

In vivo function of MTERF1

Mitochondrial transcription termination factor1 (MTERF1) TFAM POLRMT TFBM TFBM POLRMT TFAM L MTERF Kruse et al; Cell (1989) Hess et al; Nature (1991) Daga et al; JBC (1993) Fernandez-Silav et al; EMBO J (1995) Asin-Cayuela et al; JBC (2005) TFBM MTERF POLRMT TFAM Martin et al; Cell (2005)

Generation of MTERF1 knockout mouse

Confirmation of MTERF1 Knockout mouse Northern analysis Western analysis

MTERF1 knockout grow normally Male Female 40 30 Body weight (g) 30 20 10 Body weight (g) 20 10 0 5 10 15 20 0 5 10 15 20 Age (weeks) Age (weeks)

MTERF1 KO mouse have normal level of mtrnas Percent mtrna levels Percent mtrna levels Percent mtrna levels Percent mtrna levels

MTERF1 KO mouse have normal de novo mtdna transcription

MTERF1 KO mouse have normal level of mtdna WT KO Percent mtdna levels WT KO

MTERF1 KO mouse have normal level of RC subunits WT KO

Summary MTERF1 knockout mouse do not show any mtdna transcription defect Is MTERF1 mtdna transcription termination factor? Novel in vivo MTERF1 function is under investigation

Mitochondrial biogenesis Lab. Chan Bae Park Group Ajou Univ. School of Medicine Bumsoo Kim, Sohyun Kim, Insun Song Collaborators Nils-Goran Larsson Group Max Planck Institute Biology for Ageing, Germany Claes Gustafsson Group Gothenberg Univ., Sweden Aleksandar Trifunovic Group Univ. of Cologne, Germany Maria Flakenberg Group Gothenberg Univ., Sweden

The MTERF family in mammals: MTERF1-4 MTERF3 MTERF1 MTERF4 MTERF2 cnidarians flatworms nematodes insects sea urchins sea squirts teleost fishes amphibians birds mammals Linder et al; Curr Genet (2005)

Mitochondrial dysfunction in liver and insulin resistance Fatty acids Ser/Thr Kinases IR Insulin Ketones Gluconeogenesis ATP Muoio and Newgard; Nat Rev Mol Cell Biol (2008)

Mitochondrial dysfunction in the muscle and diabetes insulin resistance Fatty acids Ser/Thr Kinases IR Insulin Glucose uptake ATP Muoio and Newgard; Nat Rev Mol Cell Biol (2008)

Mitochondrial arecritical in and β-cell function Insulin release Maechler and Wolleim; Nature(2001)

Generation of TFB1M Knockout Mice

Steady-state levels of mitochondrial transcripts in TFB1M KO herat