Use of a Tandem Mass Spectrometry Research Method for the Analysis of Amino Acids and Acylcarnitines in Dried Blood Spots

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Use of a Tandem Mass Spectrometry Research Method for the Analysis of Amino Acids and Acylcarnitines in Dried Blood Spots Xiaolei Xie and Marta Kozak Thermo Fisher Scientific, San Jose, CA, USA Application Note 635 Keywords Amino acids, acylcarnitines, dried blood spots, tandem mass spectrometry, TSQ Quantum Access MAX Goal To develop a research method for simultaneous analysis of derivatized amino acids and acylcarnitines in dried blood spots using the Thermo Scienti fic TSQ Quantum Access MAX triple quadrupole mass spectrometer. Introduction Flow injection tandem mass spectrometry (FIA-MS/MS) has been frequently used for analysis of amino acids (AA) and acylcarnitines (AC) in dried blood spots for inborn errors of metabolism research. 1-3 In this application note, a FIA-MS/MS method was used to simultaneously analyze derivatized AA and AC in dried blood spots on the TSQ Quantum Access MAX triple quadrupole mass spectrometer (Figure 1). Experimental Sample Preparation Sets of isotope-labeled internal standards of amino acids (NSK-A and acylcarnitines (NSK-B and NSK-B-G), and succinylacetone (NSK-T) were purchased from Cambridge Isotope Laboratories, Inc. The daily working internal standard concentration is listed in Table 1. Acetyl chloride and 1-butanol were purchased from Sigma-Aldrich. The other reagents were from Thermo Fisher Scientific. The DBS quality control (QC) filter paper samples (Lot# 1462, 1463, 1464, 1422, 1423, 1424) were kindly provided by the United States Centers for Disease Control and Prevention (CDC) for research purpose. The QC samples containing enriched analytes of various concentrations were labeled as low, intermediate, and high. Figure 1. UltiMate 3000 RSLC system and TSQ Quantum Access MAX mass spectrometer. The following protocol was used to prepare the test samples: 1. Punch one 1/8 inch diameter disc from DBS QC filter paper sample. 2. Add 100 μl of working internal standard solution (containing internal standards of 12 amino acids and 12 acylcarnitines) to each well. 3. Shake the plate for 45 min at 45 C. 4. Transfer the eluates into another plate and evaporate at 50 C under nitrogen flow. 5. Pipet 50 μl of 3 n-butanol HCl into each sample well and incubate at 65 C for 20 min. Then, evaporate under nitrogen flow. 6. Reconstitute each sample well with 100 μl of 50:50:0.02 acetonitrile/water/formic acid.

2 Table 1. Daily working internal standard concentrations. Liquid Chromatography Internal Standard Concentration (µmol/l) Alanine-d 4 Arginine- 13 C-d 4 Aspartic acid-d 3 Citrulline-d 2 Glutamic acid-d 3 Glycine- 13 C- 15 N 1 Leucine-d 3 Methionine-d 3 Ornithine-d 2 Phenylalanine- 13 C 6 Tyrosine- 13 C 6 Valine-d 8 C0-Carnitine-d 9 0.76 C2-Carnitine-d 3 0.19 C3-Carnitine-d 3 C4-Carnitine-d 3 C5-Carnitine-d 9 C5DC-Carnitine-d 3 0.08 C5OH-Carnitine-d 3 C8-Carnitine-d 3 C12-Carnitine-d 9 C14-Carnitine-d 9 C16-Carnitine-d 3 0.08 C18-Carnitine-d 3 0.08 The Thermo Scientific Dionex UltiMate RSLC system (Figure 1) was utilized in this study under the following conditions: Pump Autosampler HPLC Column Mobile Phase LC Flow Gradient Refer to Table 2 Table 2. LC flow time event table. Thermo Scientific Dionex UltiMate HPG-3200 RS UltiMate 3000 XRS Open Autosampler OAS-3300TXRS None 50:50:0.02 acetonitrile/water/formic acid Time (min) Flow rate (ml/min) %A (mobile phase) Mass Spectrometry Flow injection MS/MS analysis was performed on a TSQ Quantum Access MAX triple quadrupole mass spectrometer. The mass spectrometer conditions were as follows: Ionization Spray voltage Sheath gas Aux gas Sweep gas 0.00 0.09 100 1.23 0.09 100 1.25 0.30 100 1.50 0.09 100 Heated electrospray ionization (HESI) Positive, 3500 V 30 Arb 5 Arb 0 Arb Capillary temperature 270 C Vaporizer temperature 75 C Data acquisition mode Selected reaction monitoring (SRM) Q1 resolution (FWHM) 0.7 Q3 resolution (FWHM) 0.7 CID gas 1.5 mtorr SRM parameters Refer to Table 3

Table 3. SRM parameters. Analyte Precursor Ion Product Ion Internal Standard Precursor Ion Product Ion Collision Energy (V) RF Lens (V) Alanine 146.2 44.2 Alanine-d 4 150.2 48.2 12 87 3 Arginine 231.2 70.1 Arginine- 13 C-d 4 236.2 75.1 33 99 Aspartic acid 246.2 144.1 Aspartic acid-d 3 249.2 147.1 13 105 Citrulline 232.2 113.2 Citrulline-d 2 234.2 115.2 17 96 Glutamic acid 260.2 158.1 Glutamic acid-d 3 263.2 161.1 14 95 Glycine 132.2 76.1 Glycine- 13 C- 15 N 134.2 78.1 6 95 Leucine 188.2 86.2 Leucine-d 3 191.2 89.2 13 94 Methionine 206.2 104.2 Methionine-d 3 209.2 107.2 13 97 Ornithine 189.2 70.1 Ornithine-d 2 191.2 72.1 19 93 Phenylalanine 222.2 120.1 Phenylalanine- 13 C 6 228.2 126.2 14 102 Tyrosine 238.2 136.2 Tyrosine- 13 C 6 244.2 142.2 15 107 Valine 174.2 72.2 Valine-d 8 182.2 80.2 13 104 C0-Carnitine 218.2 85.1 C0-Carnitine-d 9 227.2 85.1 25 103 C2-Carnitine 260.2 85.1 C2-Carnitine-d 3 263.2 85.1 21 102 C3-Carnitine 274.2 85.1 C3DC-Carnitine 360.2 85.1 C4-Carnitine 288.2 85.1 C4OH-Carnitine 304.2 85.1 C5-Carnitine 302.3 85.1 C6-Carnitine 316.3 85.1 C3-Carnitine-d 3 277.2 85.1 C4-Carnitine-d 3 291.2 85.1 C5-Carnitine-d 9 311.3 85.1 22 99 20 99 24 107 C5DC-Carnitine 388.3 85.1 C5DC- Carnitine-d 3 391.3 85.1 24 107 C5OH-Carnitine 318.3 85.1 C5OH- Carnitine-d 3 321.3 85.1 24 107 C8-Carnitine 344.3 85.1 C10-Carnitine 372.4 85.1 C8-Carnitine-d 3 347.3 85.1 24 115 C12-Carnitine 400.4 85.1 C12-Carnitine-d 9 409.4 85.1 26 117 C14-Carnitine 428.4 85.1 C14-Carnitine-d 9 437.4 85.1 26 117 C16-Carnitine 456.4 85.1 C16OH-Carnitine 472.4 85.1 C16- Carnitine-d 3 459.4 85.1 28 118 C18-Carnitine 484.5 85.1 C18OH-Carnitine 500.5 85.1 C18- Carnitine-d 3 487.5 85.1 28 118

4 Method Precision The within-run precision was determined at three concentrations by means of five successive, independent measurements of dried blood spot (DBS) samples (n=5). The run-to-run precision was determined at three concentrations by means of five independent measurements of DBS samples in five different test series (n=25) (five replicates per run times five runs). Figure 2. irc PRO intuitive workflow icon-based user interface. Data Processing Tandem MS data were processed using a meta-calculation software, irc PRO (2Next srl, Prato, Italy). The off-line automated data processing tool can process peak area, concentration, and user-defined formulas (Figure 2). Results Selected reaction monitoring (SRM) was used to acquire MS/MS data for all the analytes. Collision energy and RF lens parameters were optimized for each target and internal standard to ensure maximum selectivity and sensitivity. SRM provides a specific transition of precursor ion to product ion for each analyte, so that it will be able to identify and quantify the particular analyte in a mixture without chromatographic separation. C5DC is known to have poor ionization. As shown in Figure 3, C5DC showed high peak area counts with good signal to noise using SRM parameters defined in Table 3. Figure 3. Flow injection analysis (FIA) profile of C5DC-d3 (0.76 μmol/l) and C5DC (0.6 μmol/l blood).

Within-Run Precision The within-run precisions (n=5) at three concentrations ranged from 1.0% to 12.6% (low), 0.9% to 12.2% (intermediate), and 2.6% to 10.7% (high). (Table 4). 5 Table 4. Within-run precision at three concentrations (low, intermediate, and high). n=5. Analyte Coefficient of variation (%) Concentrations in µmol/l Low Intermediate High Low Intermediate High Alanine 8.1 10.7 7.3 482.6 668.3 777.0 Arginine 1.0 11.3 4.3 100.9 203.5 275.3 Citrulline 5.9 8.7 10.7 59.4 143.7 292.6 Leucine 1.7 9.6 4.9 204.8 364.4 558.6 Methionine 7.2 9.1 6.7 71.1 177.4 269.7 Phenylalanine 3.5 9.9 2.6 153.1 258.7 334.8 Tyrosine 1.2 9.2 5.4 246.6 448.5 607.0 Valine 10.5 11.7 5.4 294.7 465.5 519.1 C0-Carnitine 4.1 3.4 7.3 31.6 51.4 65.0 C2-Carnitine 5.6 3.7 6.1 23.2 36.6 46.3 C3-Carnitine 8.7 2.3 5.1 4.6 10.4 15.8 C3DC-Carnitine 7.2 12.2 6.8 0.3 1.0 1.9 C4-Carnitine 4.4 4.9 8.1 1.1 2.9 5.2 C4OH-Carnitine 4.8 6.8 6.6 0.4 0.8 1.8 C5-Carnitine 2.6 4.4 5.6 0.6 1.7 3.1 C5DC-Carnitine 5.9 3.4 9.2 0.7 1.4 3.4 C5OH-Carnitine 7.1 6.1 9.3 1.2 2.4 3.3 C6-Carnitine 4.8 4.2 5.6 0.4 1.0 2.3 C8-Carnitine 2.6 0.9 4.6 0.6 1.2 2.8 C10-Carnitine 10.0 4.4 8.4 0.6 1.1 2.7 C12-Carnitine 12.6 5.1 6.3 0.6 1.4 2.9 C14-Carnitine 3.9 3.3 6.5 0.6 1.7 3.3 C16-Carnitine 7.1 1.7 8.3 3.6 8.9 12.4 C16OH-Carnitine 4.0 6.8 9.8 0.1 0.4 0.9 C18-Carnitine 2.8 5.5 9.0 1.7 2.9 5.9 C18OH-Carnitine 7.3 4.3 9.1 0.3 0.7 1.2

6 Run-to-Run Precision The run-to-run precisions (n=25) at three concentrations ranged from 4.5% to 16.3% (low), 3.9% to 15.1% (intermediate), and 5.1% to 14.5% (high). (Table 5). Table 5. Run-to-run precision at three concentrations (low, intermediate, and high). n=25. Analyte Coefficient of variation (%) Concentrations in µmol/l Low Intermediate High Low Intermediate High Alanine 5.2 10.9 6.4 474.9 671.6 747.7 Arginine 7.6 9.6 9.8 101.0 193.5 282.5 Citrulline 9.2 11.8 8.0 59.1 139.7 292.3 Leucine 5.5 12.3 5.6 210.8 359.3 556.3 Methionine 13.3 13.5 8.5 71.5 164.1 261.6 Phenylalanine 4.5 10.8 5.1 153.8 258.3 336.3 Tyrosine 4.9 12.2 5.8 241.5 445.7 616.2 Valine 7.6 15.1 9.0 304.4 438.3 530.6 C0-Carnitine 5.8 5.8 8.0 31.4 49.3 61.1 C2-Carnitine 4.6 4.1 5.6 23.5 36.5 45.1 C3-Carnitine 6.8 6.6 8.1 4.5 10.5 15.7 C3DC-Carnitine 14.0 9.5 10.5 0.3 1.0 1.9 C4-Carnitine 6.8 6.5 9.0 1.0 2.9 5.2 C4OH-Carnitine 8.4 10.8 9.4 0.4 0.8 1.8 C5-Carnitine 7.4 6.1 6.7 0.6 1.7 3.1 C5DC-Carnitine 8.2 5.7 7.6 0.6 1.4 3.3 C5OH-Carnitine 8.6 5.9 7.7 1.1 2.4 3.3 C6-Carnitine 7.1 5.5 6.4 0.4 1.0 2.3 C8-Carnitine 8.6 5.1 9.5 0.5 1.2 2.8 C10-Carnitine 11.1 7.1 10.2 0.5 1.1 2.7 C12-Carnitine 11.5 6.4 6.6 0.6 1.4 2.9 C14-Carnitine 7.4 5.3 12.5 0.6 1.7 3.4 C16-Carnitine 7.5 3.9 6.8 3.6 9.1 12.3 C16OH-Carnitine 16.3 7.4 14.5 0.1 0.4 0.8 C18-Carnitine 10.9 5.7 11.3 1.7 2.9 5.7 C18OH-Carnitine 15.7 7.4 12.7 0.3 0.7 1.3

Conclusion A flow injection-tandem mass spectrometry research method was developed to simultaneously detect and quantify amino acids and acylcarnitines in dried blood spots. Rapid data processing was performed using irc Pro meta-calculation software. The derivatized sample preparation method was capable of accurately quantifying AA and AC on an affordable TSQ Quantum Access MAX triple quadrupole MS with a run time of 1.5 min. The TSQ Quantum Access MAX MS can provide within-run precision (n=5) at three enriched concentrations in the range of 0.9-12.6% and run-to-run precision (n=25) in the range of 3.9-16.3%. References 1. Chace, D.H.; Kalas, T.A.; Naylor, E.W., Use of tandem mass spectrometry for multianalyte screening of dried blood specimens from newborns. Clin Chem, 2003, 49(11), 1797-817. 2. Chace, D.H., et al., Rapid diagnosis of phenylketonuria by quantitative analysis for phenylalanine and tyrosine in neonatal blood spots by tandem mass spectrometry. Clin Chem, 1993, 39(1), 66-71. 3. Millington, D.S., et al., Tandem mass spectrometry: a new method for acylcarnitine profiling with potential for neonatal screening for inborn errors of metabolism. J Inherit Metab Dis, 1990, 13(3), 321-4. Application Note 635 Abbreviations Alanine (Ala), arginine (Arg), aspartic acid (Asp), citrulline (Cit), glutamic acid (Glu), glycine (Gly), leucine (Leu), methionine (Met), ornithine (Orn), phenylalanine (Phe), tyrosine (Tyr), valine (Val) Free carnitine (C0), acetylcarnitine (C2), propionylcarnitine (C3), malonylcarnitine (C3DC), butyrylcarnitine (C4), hydroxybutyrylcarnitine (C4OH), isovalerylcarnitine (C5), glutarylcarnitine (C5DC), hydroxyisovalerylcarnitine (C5OH), hexanoylcarnitine (C6), octanoylcarnitine (C8), decanoylcarnitine (C10), dodecanoylcarnitine (C12), myristoylcarnitine (C14), palmitoylcarnitine (C16), hydroxypalmitoylcarnitine (C16OH), octadecanoylcarnitine (C18), Hydroxyoctadecanoylcarnitine (C18OH) For research use only. Not for use in diagnostic procedures. www.thermofisher.com 2016 Thermo Fisher Scientific Inc. All rights reserved. Sigma-Aldrich is a registered trademark of Sigma-Aldrich Co. irc PRO is a trademark of 2Next srl. All other trademarks are the property of Thermo Fisher Scientific and its subsidiaries. This information is presented as an example of the capabilities of Thermo Fisher Scientific products. It is not intended to encourage use of these products in any manners that might infringe the intellectual property rights of others. Specifications, terms and pricing are subject to change. Not all products are available in all countries. Please consult your local sales representative for details. Africa +43 1 333 50 34 0 Australia +61 3 9757 4300 Austria +43 810 282 206 Belgium +32 53 73 42 41 Canada +1 800 530 8447 China 800 810 5118 (free call domestic) 400 650 5118 AN64589-EN 0616S Denmark +45 70 23 62 60 Europe-Other +43 1 333 50 34 0 Finland +358 10 3292 200 France +33 1 60 92 48 00 Germany +49 6103 408 1014 India +91 22 6742 9494 Italy +39 02 950 591 Japan +81 45 453 9100 Korea +82 2 3420 8600 Latin America +1 561 688 8700 Middle East +43 1 333 50 34 0 Netherlands +31 76 579 55 55 New Zealand +64 9 980 6700 Norway +46 8 556 468 00 Russia/CIS +43 1 333 50 34 0 Singapore +65 6289 1190 Spain +34 914 845 965 Sweden +46 8 556 468 00 Switzerland +41 61 716 77 00 UK +44 1442 233555 USA +1 800 532 4752