Company Overview. Investor Presentation November 2018

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Company Overview Investor Presentation November 2018

Important Information The information in this presentation does not contain all of the information that a potential investor should review before investing in Aerie shares. The descriptions of Aerie Pharmaceuticals, Inc. (the Company or Aerie ) in this presentation are qualified in their entirety by reference to reports filed with the SEC. Certain information in this presentation has been obtained from outside sources or anecdotal in nature. While such information is believed to be reliable for the purposes used herein, no representations are made as to the accuracy or completeness thereof and we take no responsibility for such information. Any discussion of the potential use or expected success of Rhopressa (netarsudil ophthalmic solution) 0.02%, with respect to foreign approval or additional indications, and our current or any future product candidates is subject to regulatory approval. In addition, any discussion of U.S. Food and Drug Administration ( FDA ) approval of Rhopressa does not guarantee successful commercialization of Rhopressa or FDA approval of Rocklatan TM. For more information on Rhopressa, including prescribing information, refer to the full Rhopressa product label at www.rhopressa.com. The information in this presentation is current only as of its date and may have changed or may change in the future. We undertake no obligation to update this information in light of new information, future events or otherwise. We are not making any representation or warranty that the information in this presentation is accurate or complete. Certain statements in this presentation, including any guidance or timelines presented herein, are forward-looking statements within the meaning of the federal securities laws. Words such as may, will, should, would, could, believe, expects, anticipates, plans, intends, estimates, targets, projects, potential or similar expressions are intended to identify these forward-looking statements. These statements are based on the Company s current plans and expectations. Known and unknown risks, uncertainties and other factors could cause actual results to differ materially from those contemplated by the statements. In evaluating these statements, you should specifically consider various factors that may cause our actual results to differ materially from any forward-looking statements. In particular, FDA approval of Rhopressa does not constitute approval of Rocklatan TM, and there can be no assurance that we will receive FDA approval for Rocklatan TM or any future product candidates. Any top line data presented herein is preliminary and based solely on information available to us as of the date of this presentation and additional information about the results may be disclosed at any time. In particular, FDA approval of Rhopressa does not constitute FDA approval of Rocklatan, and there can be no assurance that we will receive FDA approval for Rocklatan or any future product candidates. FDA approval of Rhopressa also does not constitute regulatory approval of Rhopressa in jurisdictions outside the United States and there can be no assurance that we will receive regulatory approval for Rhopressa in jurisdictions outside the United States. Our receipt of a Prescription Drug User Fee Act ( PDUFA ) goal date notification for Rocklatan does not constitute FDA approval of the Rocklatan New Drug Application ( NDA ), and there can be no assurance that the FDA will complete its review by the PDUFA goal date of March 14, 2019, that the FDA will not require changes or additional data that must be made or received before it will approve the NDA, if ever, or that the FDA will approve the NDA. In addition, the preclinical research discussed in this presentation including, without limitation, the development efforts stemming from Aerie s collaboration with DSM for the treatment of age-related macular degeneration or other ophthalmic uses, is preliminary and the outcome of such preclinical studies may not be predictive of the outcome of later trials. Any future clinical trial results may not demonstrate safety and efficacy sufficient to obtain regulatory approval related to the preclinical research findings discussed in this presentation. These risks and uncertainties are described more fully in the quarterly and annual reports that we file with the SEC, particularly in the sections titled Risk Factors and Management s Discussion and Analysis of Financial Condition and Results of Operations. Such forward-looking statements only speak as of the date they are made. We undertake no obligation to publicly update or revise any forward-looking statements, whether because of new information, future events or otherwise, except as otherwise required by law. 2

Aerie Overview Aerie IOP Reducing Products (IP 2030+) Rhopressa (netarsudil ophthalmic solution) 0.02% Successfully launched in U.S. April 30, 2018 Rocklatan (netarsudil / latanoprost ophthalmic solution) 0.02% / 0.005% U.S. NDA accepted, PDUFA set for March 14, 2019 Globalization Plan Under Way Europe and Japan Pipeline Activities Rhopressa 24-hour IOP reduction, normal tension glaucoma, etc. Retina Program AR-13503 and AR-1105 implants Sustained Release / Implant Manufacturing Platform Beyond Ophthalmology potential for Aerie-owned molecules Data on file 3

Rhopressa : Market Perspective 2017 U.S. Glaucoma Market AA 10% CAI 10% Lumigan 8% Travatan 7% - ~$3B Market, 37M TRx, 61M bottles - Half of volume first-line (PGAs) - Half of volume 2-3X/Day Adjuncts Fixed Combo 15% Latanoprost 37% BB 13% Rhopressa : HCP s Positioning as Concomitant Therapy - New drug class per drug databases - Once-daily dosing directed at site of pathology, the trabecular meshwork - Consistent IOP reduction over 12 months and across all IOPs tested, as demonstrated in clinical trials Refer to the full Rhopressa product label at www.rhopressa.com Graph Source: IQVIA TRx Data CAI: Carbonic Anhydrase Inhibitor AA: Alpha Agonist BB: Beta Blocker 4

Rhopressa Formulary Coverage Increasing As of 10/01/18: ~85% of Commercial Lives Covered ~40% Medicare Part D Lives Covered Preferred Tier Non-preferred Tier 45% 55% 40% 40% 25% 12% 9/01/18 10/01/18 9/01/18 10/01/18 ------------Commercial------------- -----------Medicare Part D--------- 5

Rhopressa U.S. Launch Update Weekly IQVIA Total Rx s and Extended Units: 7,000 6,000 5,000 4,000 3,000 2,000 Week Ending 11/9/18: Wholesaler Shipments to Pharmacies = 7,263 Week 30: 11/2/18 5,850 4,726 Bottles* TRx's 1,000 0 30 29 28 27 26 25 24 23 22 21 20 19 18 17 16 15 14 13 12 11 10 9 8 7 6 5 4 3 2 1 *Actual bottles dispensed exceed TRx s due to extended supply plans (e.g., 90 days supply) Rhopressa has not been approved by any regulatory authority other than the FDA. 6

Rhopressa U.S. Launch Update Strong Net Sales and Volume Growth: $8.0 $7.0 $6.0 $122 net sales per unit 70 60 50 Net Sales $ $5.0 $4.0 $3.0 $136 net sales per unit 40 30 Bottles (units) $2.0 20 $1.0 10 $0.0 Q1 2018 Q2 2018 Q3 2018 0 Net Sales $ in millions Bottles (units) in thousands Rhopressa has not been approved by any regulatory authority other than the FDA. 7

Early Rhopressa Feedback Physician Examples: End-stage glaucoma patient at brink of needing surgery. Patient on maximal medical therapy (PGA/Combo/CAI) with IOP of 18 mmhg. Added Rhopressa and IOP dropped to 13 mmhg, avoiding surgery. Patient on maximal drug therapy and inadequately controlled at 16 mmhg, with patient requiring surgery as next step. Patient IOP reduced to 12 mmhg with Rhopressa and surgery canceled. Physician added Rhopressa to a patient on two medications, and Rhopressa reduced IOP from 42 mmhg to 9 mmhg. Patient on first-line and adjunct, physician replaced previous adjunct with Rhopressa and reduced IOP from 24 mmhg to 15 mmhg. Observations on file are anecdotal, do not reflect the results of clinical trials, and are not necessarily indicative of the entire population 8

Active Engagement at Key Conferences American Glaucoma Society (AGS) March 2018 Association of Research in Vision and Ophthalmology (ARVO) April 2018 American Society of Cataract and Refractive Surgeons (ASCRS) April 2018 European Glaucoma Society (EGS) Florence, May 2018 European Society of Cataract and Refractive Surgeons (ESCRS) Vienna, September 2018 American Academy of Ophthalmology (AAO) October 2018 9

Rocklatan TM Combination Product Candidate Rocklatan TM (netarsudil / latanoprost ophthalmic solution) 0.02% / 0.005% Positioning as First Line Therapy: Benefits of Rhopressa while also targeting the secondary drain Achieved statistical superiority to market-leading latanoprost - At each of nine time points in each of the two Phase 3 trials We believe it may have the potential to become the most efficacious IOP-reducing medication for glaucoma or ocular hypertension, if approved PDUFA Date Set for March 14, 2019 Data on file Rocklatan TM has not been approved by the FDA 10

Rocklatan TM Efficacy and Safety Efficacy: Rocklatan TM demonstrated statistical superiority over its components (marketleading PGA latanoprost and Rhopressa ) in Mercury 1 and 2 Phase 3 trials, at all measured time points Consistent incremental IOP-reduction over latanoprost and Rhopressa in the range of 1 to 3 mmhg Safety: No treatment-related serious adverse events and minimal evidence of treatment-related systemic effects. The most common adverse event is conjunctival hyperemia with ~60% incidence, majority mild and sporadic and present in 20% of subjects at baseline Other ocular AEs occurring in ~5-15% of subjects receiving Rocklatan TM included: cornea verticillata, conjunctival hemorrhage, eye pruritus, lacrimation increased, visual acuity reduced, blepharitis and punctate keratitis Data on file 11

Rocklatan TM Phase 3 Month 12 Responder Analysis: Goal is to Achieve Lowest IOP Possible At Month 12: % of Patients with IOP Reduced to 18 mmhg or Lower % of Patients 100% 80% 60% 40% 20% * 27% 16% 12% 26% 22% ** 43% 37% 35% *** 60% 49% 49% *** 72% 66% 57% ** 82% 0% 14 mmhg 15 mmhg 16 mmhg 17 mmhg 18 mmhg IOP on Treatment Rhopressa (n=148) Latanoprost (n=203) Rocklatan (n=158) *p<0.05, **p<0.01, ***p<0.0001 ++ Data on File Based on Mercury 1 Interim Analysis 2 12

Rocklatan Next Steps Rocklatan TM NDA submission accepted, with March 14, 2019 PDUFA Current U.S. sales force will be trained on Rocklatan TM in advance of PDUFA Commercial formulary access expected to be finalized post-approval Medicare Part D formulary submission to payers expected in April 2019 13

Expanding Aerie Franchise: Europe and Japan Europe (2017 Europe Big 5 Glaucoma Market: 91M units per year, 1.5X U.S. units) MAA accepted for Rhokiinsa (Rhopressa ) in October 2018, expect 12-month review Mercury 3: 6-month safety and 90-day efficacy registration trial comparing Rocklatan TM for non-inferiority to a fixed-dose combo in Europe (Ganfort ) If Rhokiinsa is approved, plan to submit Rocklatan TM MAA thereafter Construction of Ireland Plant in process to support worldwide commercial supply Japan (2017 Glaucoma Market: 54M units per year) Advancing clinical development on our own, established branch office in Tokyo Phase 1 completed and Phase 2 under way in the U.S. on Japanese and Japanese-Americans; additional Phase 2 to commence in Japan Phase 3 trials expected to be conducted in Japan 14

Europe Glaucoma Market: Aerie Expects to Commercialize on Its Own (if approved) Big 5 Europe Glaucoma Market 2017 $1.0B; 91M TRx*, Market Share in TRx Non-PGA Market (47%) PGA Market (53%) CAI Others Bimatoprost 2-4 Times Daily Once Daily 2% Travoprost 10% 13% 5% AA 4% 19% Latanoprost 17% Non-PGA Fixed Combo 11% 17% Tafluprost 1% BB PGA Fixed Combo PGA: Prostaglandin Analogue; BB: Beta Blocker; AA: Alpha Agonist; CAI: Carbonic Anhydrase Inhibitor Sources: IQVIA Analytics Link at ex-manufacturer price level. *TRx calculated from IQVIA unit data (1 month = 1 TRx) 15

Japan Glaucoma Market: Aerie Expects to Partner for Commercialization (if approved) Japan Glaucoma Market 2017 $0.8B; 54M TRx*, Market Share in TRx Non-PGA Market (48%) PGA Market (52%) ROCK Others Inhibitors Unoprostone Bimatoprost CAI 4% 2% 6% Travoprost 9% 5% 2-4 Times Daily Once Daily (Unoprostone is bid) AA 12% 19% Latanoprost 13% Non-PGA Fixed Combo 9% 11% 8% Tafluprost BB PGA Fixed Combo PGA: Prostaglandin Analogue; BB: Beta Blocker; AA: Alpha Agonist; CAI: Carbonic Anhydrase Inhibitor Sources: IQVIA Analytics Link at ex-manufacturer price level. *TRx calculated from IQVIA unit data (1 month = 1 TRx) 16

Advancing the Pipeline Rhopressa Research Targets 24-hour IOP reduction Potential in normal tension glaucoma Aqueous humor dynamics (trabecular outflow, episcleral venous pressure) Pseudoexfoliative glaucoma Corneal healing Retina Program Opportunities: AR-1105 (dexamethasone steroid) potentially for DME AR-13503 (ROCK/PKC inhibitor) potentially for AMD and DME Drug Delivery Platform Focused on ophthalmic sustained release technologies (DSM / PRINT ) AR-13503 and AR-1105 are preclinical stage molecules and have not been approved by the FDA Additional potential Rhopressa indications are being considered for further study and are not labeled indications. 17

Retinal Eye Diseases Aerie s Next Chapter The retinal disease market is twice that of glaucoma with $4.9 billion in the U.S. and $9 billion worldwide per IQVIA Current treatments lose efficacy over time, some have very serious side effects and there are limited surgical options The majority of current treatments require repeated injections into the patient s eye Aerie has two preclinical molecules for the treatment of retinal disease: - AR-1105 (dexamethasone steroid) for DME - AR-13503 (ROCK/PKC Inhibitor) for AMD/DME Aerie also has implant and associated manufacturing platform technologies AR-1105 and AR-13503 are preclinical stage molecules and have not been approved by the FDA 18

2017 U.S. Retinal Disease Market 2017 Sales: $5.3B Unit Sales: 6.8M steroids, $0.15 others, $0.02 steroids, 0.23 others, 0.11 Lucentis, $1.44 Lucentis, 0.86 Eylea, 2.61 Avastin, $0.02 Eylea, $3.70 Avastin, 3.03 Sources: Mix of public information, IQVIA and estimates 19

AR-1105: Dexamethasone Implant Target indications Macular edema due to diabetic retinopathy (DME) Macular edema due to retinal vein occlusion (RVO) Unmet need First line anti-vegf agents often not sufficient even with monthly intravitreal (IVT) injections Current second-line steroid treatments have limitations due to side effects and/or injection frequency AR-1105 may have the potential to lower treatment burden and improve outcomes 2x sustained efficacy: injections every 6 months vs. every 3 months Safety: Better control of drug elution, lower exposure of non-target tissues Improved IVT delivery: applicator has smaller needle (25G) Data on File AR-1105 is a preclinical stage molecule and has not been approved by the FDA 20

AR-13503: A First-in-Class ROCK/PKC Inhibitor for the Treatment of Wet AMD and DME Active metabolite of netarsudil Potential to improve outcomes by targeting multiple disease processes Monotherapy shows strong efficacy in preclinical models Effective as adjunct to anti-vegf therapy in preclinical models Expect durable treatment effect with injection frequency of once every 4 6 months AR-13503 is a preclinical stage molecule and has not been approved by the FDA 21

Preclinical AR-13503 Provides Efficacy Similar to Eylea in a Proliferative Diabetic Retinopathy Model Oxygen-induced retinopathy (OIR) mouse model - PDR Vehicle (n=14) 1.25 mg/kg AR-13503 (n=16) Administration: Intraperitoneal QD 1 mg/kg Eylea (n=14) Data on File For more information on Eylea please see the product webpage https://www.eylea.us/ 22

AR-13503 Synergistic to Eylea in Mouse Model of Proliferative Diabetic Retinopathy Oxygen-induced retinopathy (OIR) mouse model - PDR 35% Neovascular Area (+SEM) *** % of Total Area 30% 25% 20% 15% * -40% -60% * : p<0.01 *** : p<0.0001 10% 5% 0% Vehicle n=12 Eylea (suboptimal dose) n=12 AR-13503 (suboptimal dose) n=14 Combination n=8 Administration: Intraperitoneal QD Data on File Sub-optimal dose levels selected in the study to provide less than maximal efficacy For more information on Eylea please see the product webpage https://www.eylea.us/ 23

DSM Collaboration Implant Delivery Technology Bio-erodible implant technology Aerie now has a worldwide exclusive license for all ophthalmic indications Broad sustained release platform for treatment of Wet AMD and DME, as well as glaucoma Promising results from ongoing feasibility study Evaluating AR-13503 (ROCK/PKC inhibitor) and related Aerie compounds Linear sustained elution rates over several months Achieved target retinal drug concentrations Aerie also has access to DSM s preclinical stage latanoprost implant for glaucoma Data on File 24

PRINT Technology for Ophthalmology Micropatterned Template Mold formation Mold Filling (e.g. drug/polymer) Particle Array PRINT= Particle Replication In Non-wetting Templates Aerie has the rights to use this technology for ophthalmic applications Proprietary technology capable of creating precisely engineered sustained-release products using fully scalable manufacturing processes Expected to accelerate development of Aerie s retinal disease program, including pre-clinical AR-13503 and AR-1105, and other ophthalmic indications Excellent Control Over Particle Size, Shape and Formulation: Aerie s Ophthalmic Implant Manufacturing Platform 25

Evaluating Aerie s 3,500+ Owned Molecules Commencing screening for additional indications beyond ophthalmology ROCK inhibition should have potential in: ROCK Pulmonary health, including pulmonary fibrosis and bronchial asthma Dermatology indications Aerie molecules inhibit both ROCK1 and ROCK2 Cancer Others Relationship tree of human kinases. TK, TKL, STE, CK1, AGC, CAMK, CMGC, Other: Kinase superfamilies 26

Summary Key Priorities Rhopressa : Successful launch execution Rocklatan TM : U.S. PDUFA set for March 14, 2019 Globalization Strategy Europe/Japan clinical path and commercialization strategy Ireland Manufacturing Facility Research Initiatives Rhopressa 24-hour IOP reduction, normal tension glaucoma, aqueous humor dynamics, pseudoexfoliative glaucoma, corneal healing Retina Program: - File IND for AR-1105 in 4Q 2018 and AR-13503 in 1H 2019, enter clinic in 2019 Broad sustained release ophthalmic implant and manufacturing platform Evaluating Aerie s ROCK inhibitors beyond ophthalmology Well-Financed $236M cash/investments at 9/30/18; $100M undrawn credit facility 27