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Supplementary Appendix This appendix has been provided by the authors to give readers additional information about their work. Supplement to: Donaldson SH, Bennett WD, Zeman KL, et al. Mucus clearance and lung function in cystic fibrosis with hypertonic saline. N Engl J Med 2006;354:241-50.

APPENDIX MATERIAL METHODS Study Design Complete inclusion and exclusion criteria are provided below. Inclusion criteria: 1. Established diagnosis of CF a. 2 gene mutations identified, or b. Sweat chloride > 60 mmol/l, and c. 1 or more typical CF clinical features 2. Age > 14 years 3. Able to perform spirometry and have post-bronchodilator FEV 1 > 50% of predicted at screening 4. Oxyhemoglobin saturation (by pulse oximetry) > 92% on room air 5. Able to provide informed consent Exclusion criteria: 1. Unstable lung disease: a. FEV 1 > 15% below best clinical measurement within 6 months b. Requirement for IV antibiotics within 4 weeks of screening c. Requirement for any change in pulmonary medication within 2 weeks of screening 2. Evidence of reactive airways a. Clinical diagnosis of asthma b. > 15% increase in FEV 1 after bronchodilator at screening 3. Hypertonic saline use within 2 weeks of screening 4. Unwilling or unable to either continue or discontinue cyclical therapies (e.g. inhaled tobramycin) for the 2 weeks prior to screening and the entire study period 5. Pregnancy, breast-feeding, or unwillingness to use barrier contraception during the entire study period 6. History of allergy or intolerance to amiloride, hypertonic saline, quinine, albuterol, or related compounds 7. Renal insufficiency (creatinine > 1.5 mg/dl) 8. Hyperkalemia (K + > 5.0 meq/l) 9. Investigational drug use within 30 days of screening 10. Radiation exposure within the past year that would exceed Federal Regulations by participating in the study Lung Function Assessments Spirometry and plethysmographic lung volumes were expressed as a percentage of predicted norms from Knudson et al(1). The changes in FEV 1, FVC and FEF 25-75 during the baseline and treatment intervals were calculated as follows: 1

Baseline interval: Treatment interval: (Average of values on Days 13,15) (value on Day 1) Value on Day 1 (Average of value on Days 26, 28) (value on Day 15) Value on Day 15 X 100 X 100 Dose-Response of Amiloride on ASL Volume Response to HS The effect of amiloride pretreatment on ASL height, measured 10 minutes after the addition of NaCl (0.8 mg) in perfluorocarbon, was determined over a range of amiloride concentrations (0.1 to 400 μm in the apical compartment) in CF epithelial cultures using XZ confocal microscopy. Site of Amiloride s Block of Water Permeability Osmotically driven water flow across the apical cell membrane was assessed by serially measuring cell height with XZ confocal microscopy before and after the addition of a hyperosmotic mannitol solution (PBS + 300 mm mannitol; 100 μl) to the apical surface of CF epithelia. Cell height measurements were facilitated by pre-labeling cells with the intracellular fluorophore, calcein-am (Molecular Probes). The effect of amiloride (100 μm) on cell shrinkage was determined by comparing cell heights values measured before and 1-minute after PBS/mannitol addition. To test whether cellular water permeability contributed to the HS-induced ASL volume response, CF epithelia were pretreated by adding HgCl 2 (1mM) to the apical surface(2). 10 minutes after HgCl 2 addition, NaCl (0.8 mg) was added in perfluorocarbon and the height of ASL serially monitored with XZ confocal microscopy. Pharmacological Specificity of Amiloride on Transcellular Water Permeability The effects of amiloride and two amiloride analogs (benzamil and dimethyl amiloride, each at 100 μm) on airway epithelial water permeability were tested by adding the test compound along with a hyperosmotic mannitol solution (PBS + 300 mm mannitol; 100 μl) to the apical surface of CF epithelial cultures. Cell height was serially measured with confocal microscopy and the rates of cell shrinkage through 60 seconds were compared. RESULTS Adverse Events Adverse events occurring during the treatment interval are listed in Table 1. 2

Table 1: Adverse Events during Treatment Interval Event Placebo/HS N (% of group) Amiloride/HS N (% of group) Pulmonary exacerbation 1 (8.3%) Probable abdominal sepsis 1 (8.3%) Acute FEV 1 drop >15% 1 (8.3%) after 1 st dose study meds. Fever (<24 hours) 1 (8.3%) Arthralgias 1 (8.3%) Diarrhea (<24 hours) 1 (8.3%) Fatigue 1 (8.3%) Rhinorrhea 1 (8.3%) Increased cough 1 (8.3%) 1 (8.3%) Quality of Life Individual domain scores measured during baseline and treatment intervals in each group are shown in Table 2. Baseline CFQ14+ domain scores were well matched in the two treatment groups, with the exception of a higher eating disturbances domain score in amiloride/hs group (p = 0.01). The respiratory symptom score during the treatment period was significantly higher in the placebo/hs group (p 0.01), which primarily reflected a significant improvement from baseline in this group (mean difference 7.6; p = 0.02). A significantly higher treatment burden during the treatment period was also detected in the placebo/hs group, as reflected by a mean difference of - 20.2 (p = 0.03) in the placebo/hs group (Table 2). Table 2: CFQ14+ (Quality of Life) Scores (Scores range from zero to 100 with higher scores indicating better quality of life) Amiloride/HS Placebo/HS Baseline Avg. (SE) Treatment Avg. (SE) Baseline Avg. (SE) Treatment Avg.(SE) Respiratory 73.3(4.5) 70.0(3.1) 74.7(4.1) 82.3(3.1)*, # Symptom Scores Weight 83.3(7.5) 73.3(9.7) 78.8(9.3) 87.9(8.1) Digestion 83.3(5.0) 88.9(2.9) 87.9(3.8) 89.9(3.5) Treatment burden 64.2(5.5) 51.1(9.1) 79.8(5.4) 59.6(7.4)# Physical 85.4(4.9) 80.0(5.7) 75.0(7.9) 81.1(5.5) Role 88.9(8.2) 75.0(14.1) 72.9(8.3) 77.8(9.6) Vitality 65.0(4.3) 68.3(3.0) 59.8(6.0) 67.4(4.0) Quality of Life Emotional state 80.7(5.1) 84.7(4.7) 78.8(6.7) 86.1(5.0) Domains Social/ Marginalization 73.3(6.2) 70.0(5.1) 77.0(4.1) 78.8(5.5) Body image 76.5(9.0) 80.0(8.7) 78.8(5.7) 85.9(5.0) Eating disturbances 100.0(0.0) 96.7(3.3) 85.9(5.0) Ψ 92.9(3.1) Health Perception Health 75.3(4.0) 71.1(5.3) 69.7(6.0) 75.8(4.4) 3

* denotes p = 0.01 vs. amiloride/hs treatment period # denotes p < 0.05 vs. own group s baseline period Ψ denotes p = 0.01 vs. baseline period in amiloride/hs group Laboratory Safety Data No differences in bacterial density, serum chemistries, or hematological parameters were detected upon comparison of baseline and treatment interval data in either treatment group (Table 3). Table 3: Laboratory Safety Data Amiloride/HS Baseline Treatment Mean diff (mean±se) (mean±se) (95% CI) Total bacteria, 7.26 (0.19) 6.81 (0.40) -0.45 log 10 cfu/ml (-1.63 0.73) Pseudomonas, 6.99 (0.24) 6.65 (0.21) -0.34 log 10 cfu/ml (-1.20 0.51) K+, mmol/l 4.5 (0.1) 4.6 (0.0) 0.1 (-0.2 0.3) WBC, x10 9 /L 10.8 (0.9) 10.4 (1.0) -0.4 (-2.9 2.1) Placebo/HS Baseline Treatment Mean diff (mean±se) (mean±se) (95% CI) 6.75 (0.31) 6.61 (0.36) -0.14 (-0.82 0.54) 5.68 (0.60) 6.30 (0.38) 0.62 (-1.31 2.55) 4.4 (0.1) 4.4 (0.1) 0.0 (-0.3 0.3) 9.4 (0.6) 8.9 (0.4) -0.6 (-1.5 0.4) Individual Lung Function and MC Responses to Study Medications The absolute percent change in FEV 1 during the baseline and treatment periods are plotted for each individual subject (Figure 1), demonstrating that 10/11 subjects in the placebo/hs group improved during the treatment interval. In Figure 2, individual rates of MC (MCC 1hr ) during baseline (Basal-MC) and treatment intervals (Durability-MC) are plotted, demonstrating that 9/11 subjects had sustained improvements in MC in response to placebo/hs. Figure 1: Individual FEV 1 responses to amiloride/hs and placebo/hs during baseline and treatment intervals. 4

Figure 2: Individual MCC 1hr values before and during chronic treatment with amiloride/hs or placebo/hs (Basal-MC vs. Durability-MC). Dose-Response of Amiloride on the ASL Volume Response Increasing doses of amiloride blocked the ASL volume response to hypertonic NaCl in CF epithelia (N=3). From these data, an IC 50 of ~6 μm was calculated. Figure 3: Amiloride dose-response relationship on ASL volume response 5

Cellular Path as Site of Amiloride s Block of Water Permeability To test whether the cellular path was involved in the ASL volume response to hypertonic NaCl, CF epithelia (N=4) were treated with HgCl 2 (1 mm) prior to the addition of NaCl (0.8 mg) to the apical surface. HgCl 2, an inhibitor of cellular aquaporins, blocked the ASL volume response to hypertonic NaCl, mimicking the effects of amiloride and suggesting that transcellular water flow was critical to the ASL volume response to hyperosmotic stimuli (Figure 4). Figure 4: Effect of HgCl 2 pretreatment on ASL height response to hypertonic saline * denotes p = 0.02 In a second series of experiments, cell height change in response to an apical hyperosmotic stimulus was monitored as an index of water flow across the apical cellular membrane in CF airway epithelia (N=4). Treatment with amiloride (100 μm) prevented cell shrinkage, suggesting that this agent blocked transcellular water flow at the apical cell membrane (Figure 5). Figure 5: Cell height change in response to hyperosmotic stimulus in CF epithelia. * denotes p < 0.01 6

Pharmacological Specificity of Amiloride on Transcellular Water Permeability Cell height change in response to the addition of an apical hyperosmotic stimulus was monitored ± pretreatment with benzamil or dimethyl amiloride (each at 100 μm). Whereas benzamil blocked osmotically driven cell shrinkage, as was observed with amiloride (see Figure 4 in Web Appendix), dimethyl amiloride (DMA) had no effect (Figure 6). Figure 6: Effect of benzamil and dimethyl amiloride on transcellular water permeability REFERENCES (1) Knudson RJ, Lebowitz MD, Holberg CJ, Burrows B. Changes in the normal maximal expiratory flow-volume curve with growth and aging. Am Rev Respir Dis 1983; 127(6):725-734. (2) Matsui H, Davis CW, Tarran R, Boucher RC. Osmotic water permeabilities of cultured, well-differentiated normal and cystic fibrosis airway epithelia [see comments]. J Clin Invest 2000; 105(10):1419-1427. 7