Prof Dr Mohammad Ibrahim Prof of Medical Biochemistry

Similar documents
Prof Dr Mohammad Ibrahim Prof of Medical Biochemistry

Midterm 2. Low: 14 Mean: 61.3 High: 98. Standard Deviation: 17.7

Amino acid metabolism I

Amino Acid Metabolism

Fate of Dietary Protein

Amino acid Catabolism

VITAMIN B6 History B

AMINO ACID METABOLISM. Sri Widia A Jusman Dept. of Biochemistry & Molecular Biology FMUI

Amino Acid Catabolism

Nitrogen Metabolism. Overview

AMINOACID METABOLISM FATE OF AMINOACIDS & UREA CYCLE

Amino Acid Metabolism

Amino Acid Metabolism

Amino Acid Metabolism (Nitrogen Metabolism) Dec Dr. Robert Lyons

Amino Acid Oxidation and the Urea Cycle

Lecture 10 - Protein Turnover and Amino Acid Catabolism

Nitrogen Metabolism. Overview

AMINO ACID METABOLISM

Metabolism of amino acids. Vladimíra Kvasnicová

Midterm 2 Results. Standard Deviation:

Nitrogen Metabolism. Pratt and Cornely Chapter 18

The diagram below summarizes the conversion of the twenty standard amino acids. Copyright Mark Brandt, Ph.D. 23

METABOLISM OF AMINO ACIDS

Part III => METABOLISM and ENERGY. 3.5 Protein Catabolism 3.5a Protein Degradation 3.5b Amino Acid Breakdown 3.5c Urea Cycle

Amino acid oxidation and the production of urea

Citric acid cycle. Tomáš Kučera.

CONVERSION OF AMINO ACIDS TO SPECIALIZED PRODUCTS DR. A. TARAB DEPT. OF BIOCHEMISTRY HKMU

Catabolism of Carbon skeletons of Amino acids. Amino acid metabolism

7.05 Spring 2004 May 7, Recitation #11

AMINO ACIDS NON-ESSENTIAL ESSENTIAL

number Done by Corrected by Doctor Dr.Diala

Urea cycle: Urea cycle is discovered by Krebs andhanseleit(1932).

Amino acid metabolism

SYNTHESIS OF NON-ESSENTIAL AMINO ACIDS [LIPPINCOTT S ] Deeba S. Jairajpuri

Dental Students Biochemistry Exam V Questions ( Note: In all cases, the only correct answer is the best answer)

Lecture 17: Nitrogen metabolism 1. Urea cycle detoxification of NH 3 2. Amino acid degradation

Chem 109 C. Fall Armen Zakarian Office: Chemistry Bldn 2217

INTRODUCTORY BIOCHEMISTRY. BI 28 Second Midterm Examination April 3, 2007

Biochemistry: A Short Course

NITROGEN METABOLISM An Overview

Lecture 11 - Biosynthesis of Amino Acids

Lecture 16. Finish lipid metabolism (Triglycerides, Isoprenoids/Steroids, Glyoxylate cycle) Amino acid metabolism (Urea cycle) Google Man III

Lecture 16. Finish lipid metabolism (Triglycerides, Isoprenoids/Steroids, Glyoxylate cycle) Amino acid metabolism (Urea cycle) Google Man III

Tricarboxylic Acid Cycle. TCA Cycle; Krebs Cycle; Citric Acid Cycle

Biochemistry: A Short Course

Conversion of amino acids الفريق الطبي األكاديمي

BIOCHEMISTRY م.د.شيماء سبتي B-COMPLEX VITAMINS. PYRIDOXINE (VITAMIN B6) Synonyms: Rat antidermatitis factor. Lec:5 : 2 nd stage

CLINICAL BIOCHEMISTRY 6 PLASMA PROTEINS AND PATHOLOGICAL IMPLICATIONS OF THEIR IMBALANCE

Jana Novotná, Bruno Sopko. Department of the Medical Chemistry and Clinical Biochemistry The 2nd Faculty of Medicine, Charles Univ.

1 Digestion and absorption. Lecture #14 Lecturer: PhD Alexander N. Koval

Biochemistry 2 Recita0on Amino Acid Metabolism

Amino acid metabolism II

Lynne A. Wolfe, MS, ACNP, PNP, BC Department of Genetics Yale School of Medicine

Classification of amino acids: -

Metabolism of. Sulfur Containing Amino Acids

CH395G FINAL (3 rd ) EXAM Kitto/Hackert - Fall 2003

Medical Biochemistry department 25/5/2013 MODEL AMSWERS Course code: 0704 Important Instructions For All Students:Please Read Carefully

PROTEIN METABOLISM: SPECIFIC WAYS OF AMINO ACIDS CATABOLISM AND SYNTHESIS

Chem 109 C. Fall Armen Zakarian Office: Chemistry Bldn 2217

Chapter 26. Outline. Nitrogen. Nitrogen and Amino Acid Metabolism. BCH 4054 Spring 2001 Chapter 26 Lecture Notes. Slide 1. Slide 2

November, Exam 2 (Short answer section) Biochemistry. NESA Fall Name

METABOLISM OF AMINO ACIDS

UNIT 2 Amino acids and Proteins

18 Amino Acid Oxidation and Production of Urea W. H. Freeman and Company

Find this material useful? You can help our team to keep this site up and bring you even more content consider donating via the link on our site.

Non-Protein Nitrogenous Compounds. Non-Protein Nitrogenous Compounds. NPN s. Urea (BUN) Creatinine NH 3. University of Cincinnati MLS Program 1

Integrative Metabolism: Significance

Metabolism of proteins and amino acids

Photosynthesis in chloroplasts. Cellular respiration in mitochondria ATP. ATP powers most cellular work

Respiration. Energy is everything!

Glycolysis Part 2. BCH 340 lecture 4

Non-protein nitrogenous substances (NPN)

AMINO ACID METABOLISM

Midterm 1 (in class) February 1 (next Thur) (bring calculator, log functions) Review Sessions

NITROGEN METABOLISM: An Overview

Respiration. Energy is everything!

Amino Acid Metabolism: Amino Acid Degradation & Synthesis

MULTIPLE CHOICE QUESTIONS

Objectives By the end of lecture the student should:

Test de aminoácidos. Orina.

Chapter 9 Overview. Aerobic Metabolism I: The Citric Acid Cycle. Live processes - series of oxidation-reduction reactions. Aerobic metabolism I

BIOCHEMISTRY Protein Metabolism

Dynamics of Protein And Amino Acid Metabolism

2 Tissue Amino Acid Metabolism. Lecture #17-19 Lecturer: Alexander Koval

Krebs cycle Energy Petr Tůma Eva Samcová

Citric Acid Cycle: Central Role in Catabolism. Entry of Pyruvate into the TCA cycle

Metabolism of amino acids I. Josef Fontana

E.coli Core Model: Metabolic Core

2. When a muscle depletes its supply of ATP, the next molecule used as an energy source is: a) pyruvate b) muscle glycogen c) blood glucose d) GTP

Dr. Abir Alghanouchi Biochemistry department Sciences college

Amino acid metabolism I

PAPER No. : 16 Bioorganic and biophysical chemistry MODULE No. : 25 Coenzyme-I Coenzyme A, TPP, B12 and biotin

FREE ENERGY Reactions involving free energy: 1. Exergonic 2. Endergonic

Welcome to Class 14! Class 14: Outline and Objectives. Overview of amino acid catabolism! Introductory Biochemistry!

Chapter 07. Cellular Respiration.

Respiration. Organisms can be classified based on how they obtain energy: Autotrophs

OVERVIEW M ET AB OL IS M OF FR EE FA TT Y AC ID S

Biochemistry: A Short Course

Tricarboxylic Acid Cycle

Chapter 24 Lecture Outline

Transcription:

Amino Acids Metabolism ١

i Metabolism ٢

NH2 Structure It is α-amino acetic acid Nutrional Value It is non-essential amino acid Metabolic Fate It is glucogenic g amino acid ٣

Biosynthesis 1. From 2 and NH 3 2. From glyoxylic acid 3. From serine 4. From threonine 5. From choline 6. From hydroxy proline ٤

1- Biosynthesis from 2 and NH 3 N 5, N 10 methylene H 4 folate H 4 folate 2 + NH 3 H2 synthetase NADH.HH + NAD + ٥

2- Biosynthesis from glyoxylic acid H Glyoxylic Glutamic acid PLP Aminotransferase α ketoglutaric ٦

3- Biosynthesis from serine H 4 Folate methylene H 4 Folate H H2 H Serine Serine hydroxymethyl transferase ٧

4- Biosynthesis from threonine H H 3 H H Threonine Threonie aldolase + H 3 H Acetaldehyde ٨

5- Biosynthesis from choline H 3 H 3 N H H 3 holine 2H H 3 H 3 H 3 N H H 3 N H 3 H 3 Betaine aldehyde Betaine serine H 3 H 3 NH H 3 N monomethyl glycine (sarcosine) H 3 Dimethyl glycine ٩

6- Biosynthesis from hydroxy proline H H H oxidation H H H H N H H Hydroxy proline γ hydroxy glutamic γ semialdehyde H oxidation H H H γ hydroxy glutamic transamination transamination + Aldolase H H 3 Glyoxylic Pyruvic acid H H γ hydroxy α ketoglutamic ١٠

Biosynthesis 1. From 2 and NH 3 2. From glyoxylic acid 3. From serine 4. From threonine 5. From choline 6. From hydroxy proline ١١

Metabolic Fate 1. leavage to 2 and NH 3 2. Formation of glyoxylic li acid 3. Biosynthesis of serine 4. Synthesis of glucose 5. reatine and creatinrne synthesis 6. Synthesis of glutathione thi 7. Haeme biosynthesis 8. Synthesis of purine bases 9. Detoxication of benzoic acid 10. onjugation with bile acids 11. Incorporated in tissue proteins ١٢

1- leavage into 2 and NH 3 N 5, N 10 methylene H 4 folate H 4 folate synthetase NAD+ NADH.HH + 2 + NH 3 ١٣

2- Formation of glyoxylic acid α ketoglutaric PLP Glutamic acid Aminotransferase H Glyoxylic Formic ١٤

3- Biosynthesis of serine methylene H 4 Folate H 4 Folate NH H NH 2 2 Serine hydroxymethyl transferase H Serine ١٥

4- Glucose synthesis dehydratse Serine dehydratse Pyruvic acid Serine hydroxymethyl transferase Glucose ١٦

5- Biosynthesis of reatine and creatinrne NH HN 2 NH H Arginine Transamidinase H HN H 2 N H + 2 + HN H Guanidoacetic rnithine acid ١٧

HN HN Biosynthesis of reatine and creatinine NH 2 rnithine NH acid Kidney H H 2 H 2 N HN + H HN H i 2 Arginine Arginine NH N H 3 reatinine ١٨ P i +H 2 reatine phosphate HN NH P N H 3 Transamidinase Muscle reatine Kinase ADP S-Adenosyl methionine S-Adenosyl homocysteine ATP HN Guanidoacetic Guanidoacetate methyltransferase N H 3 Liver reatine

Blood level reatine and reatinine reatine 0.2-0.6 mg/dl. reatinine 0.5-1.2 mg/dl Urinary excretion Normally creatine is present in very small amount in urine. Normal urine creatinine levels: 1 2 g/24 hours reatinine excretion for each individual is constant reatinine coefficient Males: 20 30 mg/kg/24 hours Females: 10 20 mg/kg/ 24 hours reatinine learance Males: 90-130 ml/minute Females: 80 120 ml/minute ١٩

reatinuria Physiological causes In children In females: during pregnancy and after labour Prolonged administration of androgens Pathological causes Degenerative Muscular dystrophy. Myasthenia gravis. Acute poliomyelitis. l Hypogonadism Increase tissue catabolism Hyperthyroidism Starvation Diabetes mellitus Tumors ٢٠

7- Biosynthesis i of glutathione thi H H γ Glutamyl cysteine SH synthetase + H ysteine Glutamic acid ATP H 2 ADP+Pi NH H H SH γ Glutamyl cysteine Glutathione NH H H SH NH (γ Glutamyl cysteinyl glycine) H 2 2 ATP ADP+Pi ٢١

Functions of glutathione Glutathione protects red cells from haemolysis by H 2 2 It protects haemoglobin against oxidation by H 2 2 Glutatione has a role in an amino acid transport system It inactivates insulin in the liver. It maintains (-SH) group, which is important for the activity of many enzymes. It protects the B-cells of pancreas from the degenerative action of alloxan Glutathione acts as a hydrogen carrier ٢٢

H 2 2 + 2 G-SH Glutathione peroxidase S G Selenium G-S-S-G + 2 H 2 Glutathione reducase NADP NADPH+H + 7 20 α chain 21 aa S S S S 7 19 β chain 30 aa SH SH SH SH Insulin + 4 G-SH Insulin Glutathione Transhydrogenase 2 G-S-S-G + 2 separate peptides ٢٣

7- Biosynthesis of Haeme Succinyl oa ٢٤ S oa + H H ALA synthetase PLP oash H H NH H α amino β ketoadepic acid H ALA synthetase 2 H 2 ALA dehydratase 2 H 2 δ aminolevulinic acid NH H Porphobilinogen

8- Biosynthesis i of purine bases N 2 1 6 5 H N 3 N 4 N 7 9 N H 8 H ٢٥

9- Detoxication by conjugation oa.sh S.oA Benzoic acid ATP ADP+Pi Benzoyl oa S.oA Benzoyl oa + oa.sh NH Hippuric acid ٢٦

10 onjugation with bile acids H H H H H H H H holyl oa holic Acid S.oA + H oa.sh H H Na H NH Glycocoholic Acid K Na glycocoholate K glycocoholate henodeoxycholic h Acid henodeoxyholyl h l oa Glycochenodeoxycoholic Acid ٢٧

atabolic Fate 1. leavage to 2 and NH 3 2. Formation of glyoxylic acid 3. threonine cycle 4. succinate cycle ٢٨

1- leavage into 2 and NH 3 N 5, N 10 methylene H 4 folate H 4 folate synthetase NAD+ NADH.HH + 2 + NH 3 ٢٩

2- Formation of glyoxylic acid α ketoglutaric PLP Glutamic acid Aminotransferase H Glyoxylic Formic ٣٠

3- threonine cycle Acetaldehyde H 3 H H H 3 H H Threonine Acetic acid H 3 Acetyl oa 2 H 3 oa.sh H 3 H α Amino β ketobutyric S.oA H 3 2 Aminoacitone i NH 3 Pyruvic acid H 3-2H Lactic acid H 3 H Glyoxal H H 3 H ٣١

4- succinate cycle H 2 GDP+Pi S oa Succinyl oa Succinate thiokinase GTP oa.sh ALAsynthetasese H PLP H oash H ALA synthetase α amino β ketoadepic acid xidation 2 H 2 δ aminolevulinic acid NH 3 H 2 α Ketoglutaric acid 2 Succinic i acid xida idation H α Ketoglutaraldehyde Haeme ٣٢ H Succinic semialdehyde

Inborn errors of glycine metabolism 1. Primary hyperoxaluria 2. Glycinuria ٣٣

Inborn errors of glycine metabolism 1. Primary hyperoxaluria Failure to metabolize glyoxylic acid normally ٣٤

Sources and fate of glyoxylic acid H Glyoxylic H- Formic acid xalic acid Hydroxy proline Urine ٣٥

Inborn errors of glycine metabolism 1. Primary hyperoxaluria Failure to catabolize glyoxylic acid normally Subsequent q oxidation of glyoxylic y to oxalic acid Increased excretion of oxalic acid in urine in the form of calcium oxalate This results in: Urolithiasis Nephrocalcinosis Early mortality from Renal failure Hypertension. ٣٦

2. Glycinuria i Inborn errors of glycine metabolism Excess excretion of glycine in urine y level in blood is normal A defect in renal tubular reabsorption of glycine xalate excretion in urine is normal. Tendency d of formation of oxalate urinary stones ٣٧

٣٨

I B A ٣٩

I B A ٤٠