LavaCell. Fluorescent Cell Stain. (version A) Catalog No

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MOLECULAR PHARMACOLOGY SUPPLEMENT

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LavaCell Fluorescent Cell Stain (version A) Catalog No. 15004 Active Motif North America 1914 Palomar Oaks Way, Suite 150 Carlsbad, California 92008, USA Toll free: 877 222 9543 Telephone: 760 431 1263 Fax: 760 431 1351 Active Motif Europe 104 Avenue Franklin Roosevelt B-1330 Rixensart, Belgium UK Free Phone: 0800 169 31 47 France Free Phone: 0800 90 99 79 Germany Free Phone: 0800 181 99 10 Telephone: +32 (0)2 653 0001 Fax: +32 (0)2 653 0050 Active Motif Japan Azuma Bldg, 7th Floor 2-21 Ageba-Cho, Shinjuku-Ku Tokyo, 162-0824, Japan Telephone: +81 3 5225 3638 Fax: +81 3 5261 8733

TABLE OF CONTENTS Introduction.... 1 Storage Conditions.............................................................. 3 Protocols A. Staining Live Cells........................................................ 3 B. Staining Fixed Cells....................................................... 3 References...... 3 Appendix Section A. Troubleshooting Guide............................................ 4 Section B. Related Products................................................. 4 Technical Services............................................................... 5 Page

Introduction LavaCell is a naturally occurring compound from the fungus Epicoccum nigrum that can be used to fluorescently stain cells. LavaCell is a small, non-toxic, water-soluble, neutral azaphilone molecule that rapidly diffuses into live or fixed cells and stains cell membranes and lipophilic organelles without staining nucleic acids. Unlike other fluorescent stains, LavaCell does not adversely affect cell growth, is cell permeable, has a long Stokes shift, and unbound dye does not fluoresce 1. LavaCell has a molecular weight of 410 Daltons and reacts with primary amine groups instantly to produce fluorescent red compounds. LavaCell has a weak green fluorescence in water (520 nm) that shifts to red (610 nm) after reacting with protein. It can be excited at 405, 488 and 532 nm, enabling the use of any common laser 1, 2. The staining does not self-quench, and it can be multiplexed with a range of yellow, green and blue-emitting compounds due to LavaCell s characteristic long Stokes shift of at least 100 nm. LavaCell staining is fast: the plasma membrane is stained in two minutes, and the cytoplasm is stained to saturation in fifteen minutes. The stain has no cytotoxic effect and does not inhibit cellular growth at a concentration of 5 µm over a 24 hour period (Table 1) 1. Because the stain fluoresces much brighter when bound to protein than when unbound, there is little background and washing steps are often not necessary. product format catalog no. LavaCell 200 µg 15004 1

Table 1. In Vitro Cytotoxicity Results in Cell Lines at Three Concentrations of LavaCell 1, 3. Percent Growth at: Percent Growth at: Cell Line 0.5 µm 5 µm 50 µm Cell Line 0.5 µm 5 µm 50 µm Leukemia Melanoma CCRF-CEM 110 95 5 SK-MEL-2B 68 76 41 HL-60 (TB) 85 111-17 SK-MEL-5 103 104-6 K-562 100 141 3 UACC-257 94 94 57 MOL T-4 96 99-26 UACC-62 92 89-50 RPMI-8226 109 115 3 LOX IMV1 95 100 90 SR 81 102-8 MALME-3M 100 69-8 M14 99 83-28 Non-small cell lung cancer SK-MEL-2 94 86 37 A549/ATCC 94 97 10 EKVX 89 86 3 Ovarian cancer NCI-H226 86 66-8 IGROV-1 98 98 12 HOP-62 94 96 1 OVAR-3 68 78-43 NCI-H3322M 100 84-15 OVAR-4 104 100 51 NCI-H460 93 90 11 OVAR-5 83 85-20 NCI-H522 94 91-22 OVAR-6 91 93 17 SK-OV-3 72 62-19 Colon cancer COLO205 82 76-49 Renal cancer HCC-2998 53 68-28 786-0 95 102 9 HCT-116 92 87 2 ACHN 95 94 87 HCT-15 92 93 73 CAK1-1 97 80-31 HT29 97 90 48 RXF393 85 86 15 KM12 96 87-15 SN 12C 87 80-8 SW-620 103 103 31 TK-10 90 73 20 UO-31 86 78 20 CNS cancer SF-268 89 83 16 Breast cancer SF-295 74 56-42 MCF-7 95 87 16 SF-539 92 91 4 NCVADR-RES 100 95-33 SNB-19 65 56-32 MDA-MB-231/ATCC 76 70-55 SNB-75 97 89 75 HS 578T 94 86-15 U251 92 94 85 MDA-MB-435 94 82-44 BT-549 86 78 6 Prostate cancer T-47D 52 45-50 DU-145 91 94 20 PC-3 76 109 35 2

Storage Conditions Reagent Quantity Storage / Stability LavaCell 200 µg -20 C for 6 months in the dark (1 mg/ml (2.44 mm) in DMSO) Additional materials required Tissue culture supplies Formaldehyde (Fixation) Fluorescence instrumentation Protocols Cell Staining A. Live Cells 1. Grow cells to desired confluency on suitable coverglass or clear-bottom plate. 2. Prior to staining, wash cells twice with warm (37 C) PBS. 3. Add stain to cells at a final concentration of 2 to 10 µm in culture media for 30 minutes. Note: B. Fixed Cells If cells are to be maintained in culture after staining, use LavaCell at a concentration of not more than 5 µm. An increase in staining background may develop as LavaCell can stain proteins that are present in serum within serum-containing culture media. 1. Grow cells to desired confluency and wash twice with cold PBS. 2. Fix cells in chilled PBS containing 4% formaldehyde for 20 minutes at 4 C, then wash twice with cold PBS. 3. Stain cells with LavaCell at a final concentration of 12 to 24 µm in culture medium for 30 minutes in the dark at room temperature. References 1. Choi, H.-Y. et al. (2006) J. Fluorescence 16(4): 475-482. 2. Coghlan, D.R. et al. (2005) Org. Lett. 7(12): 2401-2404. 3. National Cancer Institute Therapeutics Development Program, NCI ID No. D734922/1. 3

Appendix Section A. Troubleshooting Guide Problem/question Possible Cause Recommendation Staining differs across cell population. Cells may vary in amount of endoplasmic reticulum, Golgi apparatus, etc. which are stained by LavaCell. Background staining present. Serum-containing cell culture medium. Wash with serum-free media and stain in serum-free media.. Section B. Related Products Fluorescent Detection Protein Quantitation Units Catalog No. ProStain 1000 rxns 15001 Fluorescent Detection Albumin Quantitation Units Catalog No Albumin Blue Fluorescent Assay Kit 1 Kit 15002 Fluorescent Detection Fluorescent Dyes Units Catalog No. Chromeo 494 Carboxylic Acid 1 mg 15110 5 mg 16110 Chromeo 494 NHS Ester 1 mg 15111 5 mg 16111 Chromeo 494 Biotin 1 mg 15112 5 mg 16112 Chromeo 494 Streptavidin 1 mg 15113 5 mg 16113 Chromeo 546 Carboxylic Acid 1 mg 15210 5 mg 16210 Chromeo 546 NHS Ester 1 mg 15211 5 mg 16211 Chromeo 546 Biotin 1 mg 15212 5 mg 16212 Chromeo 546 Streptavidin 1 mg 15213 5 mg 16213 Chromeo 642 Carboxylic Acid 1 mg 15310 5 mg 16310 Chromeo 642 NHS Ester 1 mg 15311 5 mg 16311 Chromeo 642 Biotin 1 mg 15312 5 mg 16312 Chromeo 642 Streptavidin 1 mg 15313 5 mg 16313 Fluorescent Detection Fluorescent Assays Units Catalog No. ToxCount 20 x 96 rxns 18010 4

Technical Services If you need assistance at any time, please call Active Motif Technical Service at one of the number listed below. Active Motif North America 1914 Palomar Oaks Way, Suite 150 Carlsbad, CA 92008 USA Toll Free: 877 222 9543 Telephone: 760 431 1263 Fax: 760 431 1351 E-mail: tech_service@activemotif.com Active Motif Europe 104 Avenue Franklin Roosevelt B-1330 Rixensart, Belgium UK Free Phone: 0800 169 31 47 France Free Phone: 0800 90 99 79 Germany Free Phone: 0800 181 99 10 Telephone: +32 (0)2 653 0001 Fax: +32 (0)2 653 0050 E-mail: eurotech@activemotif.com Active Motif Japan Azuma Bldg, 7th Floor 2-21 Ageba-Cho, Shinjuku-Ku Tokyo, 162-0824, Japan Telephone: +81 3 5225 3638 Fax: +81 3 5261 8733 E-mail: japantech@activemotif.com Visit Active Motif on the worldwide web at http:// At this site: Read about who we are, where we are, and what we do Review data supporting our products and the latest updates Enter your name into our mailing list to receive our catalog, MotifVations newsletter and notification of our upcoming products Share your ideas and results with us View our job opportunities Don t forget to bookmark our site for easy reference! 5