Viral Infection. Pulmonary Infections with Respiratory Viruses. Wallace T. Miller, Jr., MD. Objectives: Viral Structure: Significance:

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Viral Infection Wallace T. Miller, Jr., MD Pulmonary Infections with Respiratory Viruses Wallace T. Miller, Jr. MD Associate Professor of Radiology and Pulmonary and Critical Care Medicine University of Pennsylvania Health System millerw@uphs.upenn.edu Objectives: To learn: The common causes of viral LRTI Some basic facts about viral infection The common imaging appearances of viral LRTI Significance: Viral pneumonias account for 9-29% of all community-acquired i pneumonias requiring i hospitalization in adults*. *de Roux A. Chest 2004; 125:1343 1351. Lim WS. Thorax 2001; 56:296-301. Marston BJ. Arch Int Med 1997; 157:1709-1718. Jennings LC. Thorax 2008; 63:42-48. Diaz A. Chest 2007; 131:779-787. Viral Structure: Simple, ingenious organism Uses host reproductive machinery to replicate itself Payload RNA or DNA genome Enzymes to initiate viral replication Delivery system Protective protein coat (capsid) + lipid membrane Virus encoded binding proteins Figure 128-3 Virus-Cell Interactions Attachment Viral proteins bind cell surface molecules Penetration and disassembly Endocytosis of envelope viruses Genome replication RNA - cell ribosomes or viral RNA polymerase DNA - entry into nucleus Cell death (apoptosis) Cell defense vs. viral spread RNA viruses - induce apoptosis - spread DNA viruses - block apoptosis - latency Figure 128-5 Viral Causes Lower Resp Tract Infections Community Acquired Influenza ~ 50-60% RSV ~ 20-25% Adenovirus ~10% Parainfluenza ~5% Metapneumovirus ~ 5% Other Coronavirus Rhinovirus Varicella Mechanism: Inspired respiratory droplets Influenza Figure 162-1 RSV Figure 155-2 HMP Figure 156-1 Adenovirus Figure 139-2 542

Viral Causes Lower Resp Tract Infections Opportunistic Viruses ONLY Herpes group Simplex I & II (HSV) Cytomegalovirus (CMV) Varicella Zoster (VZV) Mechanism Latency (nerve cells, lymphocytes) T cell immune suppression Reactivation Viremia - lung involvement Herpes simplex EM? CMV EM? Varicella zoster Figure 131-1 Community Acquired Viruses: Clinical Manifestations All cause flue-like symptoms Heralded by upper tract infection Fever, coryza Lower tract disease Cough, dyspnea, sputum production Tracheobronchitis Bronchiolitis Duration can be prolongued 7-21 days Community Acquired Viral Infection Computed Tomography PENN study (CAV LRTI) Definition of Disease Positive viral PCR of NP swab or BAL AND Lower resp tract symptoms new onset dypsnea, cough or sputum production Exclusions Concomitant bacterial pneumonia Pre-existing diffuse lung disease Control Group Individual with negative PCR assay Lower resp tract symptoms Population 97 index cases 267 negativecontrols Virus Influenza 56 (58%) RSV 24 (25%) Adenovirus 11 (11%) Parainfluenza 6 (6%) Computed Tomography Normal CT All CAVI similar appearance 3 broad patterns of appearance No imaging findings/normal ~1/3 Imaging Insensitive for CAVI Tracheobronchitis/bronchiolitis pattern ~1/3 Multifocal pneumonia pattern ~1/4 Often confused with aspiration pneumonia Variable appearance ~1/20 Image of Normal Clinical history of severe symptoms/ normal CT 543

Bronchitis/Bronchiolitis Pattern Bronchitis/Bronchiolitis Pattern Tree-in-Bud Br wall thick Tree-in-Bud Br wall thick 41M HIV+ 1 mo cough dyspnea night sweats RSV bronchiolitis 41 man fever, cough, dyspnea RSV bronchitis Multifocal Pneumonia Pattern Diffuse Pneumonia Pattern Multifocal GGO Multifocal consolidation 21 pregnant W fever, cough, myalgias Image of Multifocal Pneumonia Diffuse GGO Diffuse consolidation i Not common appearance Image of Diffuse GGO Pneumonia Influenza A Focal Pneumonia Pattern Comparison with Controls Image of Focal Pneumonia Infection Pattern Viral LRTI n=97 Non Viral LRTI n=267 P value Normal/No Acute Disease 34 (35%) 90 (34%) 0.8 Bronchitis/ Bronchiolitis 32 (33%) 27 (10%) <0.001 Focal Pneumonia 6 (6%) 30 (11%) 0.17 Multifocal Pneumonia 23 (24%) 76 (28%) 0.42 Clinical history Bronchiolitis pattern: 80-85% specificity CAVI pattern: non specific 544

Subgroup Analysis* Subgroup Analysis Individual viruses tend to have a typical appearance RSV Bronchiolitis pattern Adenovirus pattern Influenza Normal CT DATA slide Second example of three patterns and the causes * unpublished data * unpublished data Subgroup Analysis Other Community Acquired LRTI: The Lesson of SARS Second example of three patterns and the causes Coronavirus epidemic Novel virus Increased prevalence severe disease (pneumonia) Occasionally other respiratory viruses will produce Flue-like disease Sporadic -epidemic - pandemic Radiograph of SARS * unpublished data Community Acquired LRTI: Chest Radiographs? CAV LRTI: Chest Radiographs? Insensitive for disease normal exam in ~ Usually detected Multifocal - diffuse consolidation Bronchiolitis Faint bronchial wall thickening ( peribronchial cuffing ) Small fuzzy nodules difficult to detect Underdiagnosis/overdiagnosis Radiograph of viral pneumonia Radiograph of Viral bronchiolitis RSV bronchiolitis 545

CAV LRTI: Chest Radiographs? Radiograph of Viral bronchiolitis Do Opportunistic Viruses Look Different? CMV and HSV reactivation viremia pneumonia Diffuse GGO more common appearance? Litterature references that this is typical appearance RSV bronchitis CMV Opportunistic Viruses CMV Pneumonia HSV Pneumonia? Clinical History Clinical History Viral Lower Respiratory Infections: Conclusions Community acquired 4 common causes: Influenza, RSV, adenovirus, parainfluenza Occasionally others: metapneumovirus, coronavirus (SARS), 1 VZV Inhalationof of infected droplets Opportunistic Ability to remain dormant Herpes group viruses: CMV, HSV 1, HSV 2, VZV Reactivation - Viremia - Pneumonia Viral Lower Respiratory Infections: Conclusions 3 Imaging Patterns of community acquired viral infection No Imaging findings/ Normal exam Imaging insensitive for viral LTRI Bronchitis/bronchiolitis Bronchial wall thickening, Tree-in-bud Specific sign of viral infection in appropriate clinical setting Multifocal GGO/consolidation Diffuse GGO/consolidation rare Non-specific finding often confused with aspiration Different appearance of opportunistic infections? Diffuse GGO Different mechanism of spread: viremia 546

Seasonal Flue and the New H1N1 Virus If time will talk specifically about influenza and new epidemic Influenza Recurrent febrile respiratory epidemics for >400 years (1,2) 1918 pandemic 21 million deaths worldwide Viral Structure Epidemiology 3 strains (A, B, C) Only A can cause pandemics C does not cause human respiratory infection Single stranded, - sense, RNA genome Enveloped virus 2 primary surface spikes hemagglutinin (HA) Neuraminidase (NA) Figure 162-1 Figure 162-2 Seasonality: Temperate: winter peak - summer trough Tropical: year round low level disease At risk populations Infants Elderly 3rd trimester pregnancy (rel T cell immunosuppression) Immunosuppressed (HIV, organ Tx) Spread Figure 162-5 Eid Epidemici Pandemic Outbreak confined to one Outbreak that spreads rapidly location across the world Modification of existing virus Emergence of a new virus (Antigenic drift) (Antigenic shift) Partial immunity in population No immunity in population Attack rates 10-20% Attack rates increased Single winter peak Infection out of season Multiple waves of disease Antigenic Shift and Human Pandemics Large diverse avian reservoir of Influenza A No significant transfer avian Influenza to humans Isolated from human Influenza Progressive drift away from human strains Antigenic Shift theories Intermediate Host: Pigs Can be infected with both human and avian Influenza A Gene rearrangement during co-infection or evolution avian virus in pig New strain capable of infecting humans Direct Transmission Avian strain mutates capability to infect humans With antigenic Shift: Human Pandemic 547

Pathogenesis Infectious aerosols (cough, sneeze) Infect columnar epithelial cells and PML s Epithelial cells: Diffuse inflammation of trachea and bronchi Viral replication cell apoptosis PML s: Diminished chemotaxis, phagocytosis Viral shedding Infect adjacent cells Spread to other hosts Illness severity quantity viral shedding Host Responce Systemic Antibodies (IgM, IgG) To HA and NA receptors M and NP protiens Protects against re-infection with homologue/similar strain Mucosal Antibodies (IgA, IgG) Protects against re-infection with homologue/similar strain? More important than systemic antibodies? Cellular response (cytotoxic T-cells) Primary means of clearing infection Infection Influenza B milder than Influenza A? Systemic effects/rhinitis (first 3-8 days) Fever, chills, HA, myal gias, malaise, anorexia, coryza Predominance of systemic effects distinguish Influenza from other viral RTI Pulmonary Involvement (~10%) Tracheobronchitis (several days into infection) Primary viral Secondary bacterial initial improvement/recrudescence of fever, cough Strep pneumo, H. Influenzae, Staf. Aureus Croup Exacerbation COPD 548