Disclosure Slide. Research Support: Onconova Therapeutics, Celgene

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Oral Rigosertib Combined with Azacitidine in Patients with Acute Myeloid Leukemia (AML) and Myelodysplastic Syndromes (MDS): Effects in Treatment Naïve and Relapsed- Refractory Patients Shyamala C. Navada, MD 1, Guillermo Garcia-Manero, MD 2, Katherine Hearn, RN 2, Rosalie Odchimar-Reissig, RN 1, Erin Demakos, RN 1, Pierre Fenaux, MD, PhD 3, Michael E. Petrone, MD, MPH 4, Patrick S. Zbyszewski, MBA 4, Steven M. Fruchtman, MD 4, Lewis R. Silverman, MD 1 1 Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY; 2 MD Anderson Cancer Center, Houston, TX; 3 Hôpital St Louis/Université Paris; 4 Onconova Therapeutics, Inc., Newtown, PA

Disclosure Slide Research Support: Onconova Therapeutics, Celgene

Treatment of Higher-risk MDS Azacitidine is standard of care for higher-risk MDS patients Clinical responses (CR+PR+HI) occur in 45-50% a All responding patients ultimately relapse or progress Patients failing an HMA have a poor prognosis, with a median overall survival (OS) of only 4-6 months b There are no approved therapies after HMA failure a Silverman LR et al. J Clin Oncol 2002; 20(10): 2429-40; Fenaux P et al. Lancet Oncol 2009; 10: 223-32. b Prebet T et al. J Clin Oncol 2011;29(24):3322-7.

Background: AML Dismal prognosis in majority of older patients Azacitidine single agent CR rate of 10-20% in phase 2 studies MDS 001 study a low blast percentage WHO AML (20-30%) Azacitidine significantly prolongs survival compared with conventional care regimens (CCR) Phase 3 in AML - azacitidine reduced risk of death by 31% compared to CCR b a Fenaux P et al. Lancet Oncol 2009; 10: 223-32; Fenaux et al. J Clin Oncol 2009; 28: 562-9. b Dombret H et al. Blood 2015; 126(3); 291-9.

Background: Rigosertib Novel agent that inhibits cellular signaling by targeting the Ras-binding domain (RBD) Proposed MOA blocks multiple cancer targets and has downstream effects on PI3K/AKT and Raf/PLK pathways Ras Mechanism in MDS may be mediated in patients with aberrant signaling driven either by overexpression or genetic mutations of Ras Raf Initial Phase 1/2 studies suggested clinical activity in patients with MDS and AML Oral formulation utilized in this study GTP Ras Rigosertib Divakar et al, AACR Annual Meeting 2014; abstract LB-108; Olnes et al, Leuk Res 2012;36:964-5; Chapman et al, Clin Cancer Res 2012;18:1979-91. Rigo Rigo Rigo Raf PI3K Other Effectors

Rigosertib is Synergistic with Azacitidine in Preclinical Studies Sequential exposure with rigosertib followed by azacitidine achieved maximum synergy at concentrations achievable in the clinical setting Combination Drug CI Ratio Description Rigosertib* (125 nm) + 5AzaC (2 um) 0.44 1:62.5 Synergism Rigosertib (125 nm) + 5AzaC (4 um) 0.30 1:31.25 Strong synergism Rigosertib (250 nm) + 5AzaC (2 um) 0.68 1:125 Synergism Rigosertib (250 nm) + 5AzaC (4 um) 0.57 1:62.5 Synergism Rigosertib (500 nm) + 5 AzaC (2 um) 0.63 1:250 Synergism Rigosertib (500 nm) + 5AzaC (4 um) 0.75 1:125 Moderate synergism Skiddan I et al. AACR Abstract 1310, April 2006; 47:309.

Combination Trial Design Sequence Suggested by Preclinical Findings Treatment regimen: Week 1: Oral rigosertib BID a Week 2: Oral rigosertib a + azacitidine (75 mg/m 2 /day SC or IV) Week 3: Oral rigosertib BID a Week 4: No treatment a in escalating dose cohorts Week 4 No Treatment Week 1 Oral Rigosertib only Week 3 Oral Rigosertib only Week 2 Oral Rigosertib + Azacitidine (SC or IV) Navada S et al. ASH 2014; Abstract 3252.

Phase I Rigosertib and Azacitidine Combination Included patients with MDS and AML, both de novo and failing primary therapy in classic 3+3 design AML inclusion limited to: wbc < 25 x 10 9 /L, and absence of rapidly rising blast percentage Rigosertib was administered in dose escalating cohorts 140 mg/140 mg 280 mg/280 mg 560 mg/280 mg * Navada S et al. ASH 2014; Abstract 3252.

Concentration (ng/ml) Plasma Levels of Rigosertib from a Bioavailablity Study 5000 4000 3000 2000 1000 0 0 4 8 Time (hr) 24 Hr Inf 800 mg/m2 Oral-560 mg Fasted Oral-560 mg Fed

Eligibility Criteria for Phase 2 Included patients with MDS (IPSS Int-1, Int-2, or High risk) and CMML AML (blasts 20-30%) Prior HMAs permitted; No prior rigosertib ECOG PS 2; Age 18 years Creatinine 2.0 mg/dl; Total bilirubin 2.0 mg/dl; ALT/AST 2.5 x ULN

Study Endpoints Response Assessed per IWG 2006 MDS and modified IWG 2003 AML Criteria * Complete remission, partial remission or marrow CR (MDS and AML); morphologic CR, morphologic leukemia free state Hematologic improvement in any lineage and stable disease were categorized Safety and tolerability of combination * Cheson BD et al. J Clin Oncol 2003: 21(24): 4642-9; Cheson BD et al. Blood 2006; 108(2): 419-25.

Patient Characteristics (MDS) Number of MDS patients treated 40 Age Median 66 Range 25-85 Sex Male 29 (73%) Female 11 (27%) ECOG performance status 0 9 (22%) 1 29 (73%) 2 2 (5%) IPSS classification Intermediate-1 12 (30%) Intermediate-2 15 (37%) High 13 (33%) IPSS-R cytogenetic risk Very Good/Good 14 (35%) Intermediate 12 (30%) Poor/Very Poor 10 (25%) Unknown 4 (10%) Prior HMA therapy Azacitidine 12 (30%) Decitabine 4 (10%) Both 1 (3%)

Efficacy Results in MDS Number of MDS patients treated Evaluable for response (8 Ph1, 25 Ph2) 40 33 Overall response 25 (76%) Complete remission (CR) 8 (24%) Partial remission 0 Marrow CR + Hematologic Improvement 10 (30%) Marrow CR alone 6 (18%) Hematologic Improvement alone 1 (3%) Stable disease 8 (24%) Progression 0 Not evaluable for response (per protocol) 7 (18%) Median duration of treatment (months) 6 (1-37+) Median time to initial/best response (cycles) 2/3 * Per IWG 2006

Response per IWG 2006 Among MDS IPSS-R Subgroups Response per IWG 2006 Low/Intermediate N=8 High N=15 Very High N=13 Unknown N=4 CR 3 (38) 2 (13) 3 (23) 0 mcr 2 (25) 6 (40) 6 (46) 2 (50) SD 2 (25) 4 (27) 1 (8) 1 (25) PD 0 0 0 0 NE 0 3 (20) 3 (23) 1 (25) Erythroid Response 2 (25) 5 (33) 6 (46) 0 Platelet Response 3 (38) 5 (33) 6 (46) 1 (25) Neutrophil Response 4 (50) 5 (33) 4 (31) 0 Overall Response 6 (75) 8 (53) 9 (69) 2 (50)

Efficacy: MDS Patients with Prior HMA Failure Number of patients evaluable for response (3 Ph1, 10 Ph2) 13 (10 AZA, 2 DAC, 1 both) Number of prior HMA cycles 4-20 Hematologic response per IWG 2006 8 (62%) Complete remission (CR) 1 (8%) Partial remission 0 Marrow CR with concurrent HI 4 (31%) Marrow CR alone 3 (23%) Stable disease 5 (38%) Progressive disease 0 Hematologic improvement (trilineage) 4 HMA-naïve patients (N=20) response per IWG 17 (85%)

Duration of Overall Response

Hematology Trends for Patient 101-006 with MDS Hemoglobin Platelets Neutrophils 12 cycles of AZA stable disease RBC and platelet transfusions Blasts 7% Monosomy 7 RUNX-1 AZA + RIG in 09-08 for 20+ months Complete remission RBC transfusion independent <5% blasts PB CR criteria

Patient Characteristics (AML) Number of AML patients treated 10 Age (years) Median 66 Range 57 80 Sex Male 5 (50%) Female 5 (50%) ECOG performance status 0 1 (10%) 1 7 (70%) 2 2 (20%) Prior therapy Cytarabine 6 (60%) Clofarabine/Cladarabine 4 (40%) Anthracyclines 5 (50%) Azacitidine 2 (20%) Decitabine 2 (20%)

Treatment Related Characteristics & Response - AML UPN Age (yrs) Cohort* Previous Therapy DoT (months) 101-033 61 140 bid 1. Induction 2. Investigational AML Status at Study Entry 4.0 Refractory NE IWG Response (D0R) weeks) 101-002 70 140 bid Growth Factors 29.6 Secondary MoCR (25.3) 102-001 76 140 bid Growth Factors 4.0 MDS/AML NE 102-003 78 140 bid Growth Factors 55.1 MDS/AML MoCR (43) 101-005 73 280 bid 1. Induction 2. DEC x 5 102-009 71 560/280 1. Induction x 2 2. AZA x 25 4.0 1 st Relapse TF/I 12.9 Relapsed TF/R 102-007 80 560/280 AZA x 5 32.0 Secondary TF/R 101-008 57 560/280 Induction 8.1 Refractory MLFS (4.1) 101-009 60 560/280 Induction 24.4 Relapsed SD 101-007 77 560/280 1. Induction 2. DEC x 5 MDS/AML 20 to <30% blasts NE patients off study prior to 12 weeks of combination MoCR morphologic complete remission TF/I treatment failure/indeterminate TF/R treatment failure/resistant MLFS morphologic leukemia-free state SD stable disease *Oral rigosertib dose 16.0 Relapsed SD

Efficacy Results in AML Number of AML patients treated Evaluable for response Overall response 3 (37.5%) Morphologic complete remission 2 (25%) Morphologic leukemia free state 1 (12.5%) Treatment failure 3 (37.5%) Stable disease 2 (25%) Not evaluable for response (per protocol) 2 Median duration of treatment (months) 14.5 10 8 * Per IWG 2006

Rigosertib alone and in combination with azacitidine has Epigenetic effects in vitro and in vivo Rigosertib modulates HDACs (class I, II and IV) and DNMT1 in MDS and AML cells in vitro Rigosertib alone or in combination with AZA leads to different levels of histone methylation and acetylation altering activator/repressor marks Rigosertib alone or in combination with Azacitidine down regulated the AKT pathway and reduced cell cycle check point protein levels; an increase in apoptosis was demonstrated only with the combination. Similar effects on chromatin were seen in preliminary data from patients before and after the first cycle of treatment Chaurasia et al EHA, 2017 Effects of rigosertib on HDACs (class I, II and IV) and DNMT1 Effect of RIGO alone or in combination with AZA on cell cycle check proteins, apoptosis and AKT cell signaling pathway

Adverse Events Table 3: Most Common Treatment-emergent AEs Among Pts with MDS, All Grades (N = 40) MedDRA Preferred Number (%) of Patients Term All Grades Grade 3 Any TEAE 40 (100) 38 (95) Constipation 18 (45) - Diarrhea 17 (43) 1 (3) Nausea 17 (43) - Hematuria 16 (40) 5 (13) Dysuria 16 (40) 3 (8) Fatigue 16 (40) - Decreased appetite 15 (38) - Thrombocytopenia 13 (33) 13 (33) Pyrexia 13 (33) - Neutropenia 12 (30) 12 (30) Arthralgia 11 (28) 1 (3) MedDRA = Medical Dictionary of Regulatory Activities

AML Conclusions ORR 37.5% in secondary and refractory AML patients with an additional 25% with stable disease The combination is well tolerated in patients with MDS & AML and has a safety profile similar to single-agent azacitidine. The combination should be explored as a novel therapeutic approach in older patients with AML MDS Oral rigosertib and azacitidine demonstrated an overall response rate of 76% in patients with MDS 85% and 62% of patients with MDS who where either HMA naïve or HMA failures, respectively, responded to the combination The combination will be explored further in a future Phase 3 study; discussions underway for dose optimization

Future Directions Rationale for Phase 2 Expansion High response rate in HMA naïve and HMA failure, respectively Planning a randomized Phase 3 of the combination compared to single agent azacitidine in HMA naïve patients 40 patients to refine the CR + PR response rate with greater precision reduce the Confidence Interval by 30%

Phase 2 Expansion Future Directions (cont.) Reduce the incidence of bladder AEs and further optimize dose and schedule of rigosertib Phase 2 in LR MDS had best results in 560/560 group (compared to 560/280 group) Transfusion independence: 39 vs 24% Hematologic improvement: 46 vs 21% 2 cohorts 560 mg/560 mg and 840 mg/280 mg Enhance bladder emptying and reduce exposure to rigosertib metabolite overnight Randomized Phase 3 Study of Azacitidine + oral Rigosertib vs Azacitidine Primary Endpoint: CR + PR Anticipated start 1H 2018

Acknowledgments Patients Research Coordinators Icahn School of Medicine at Mount Sinai MD Anderson Cancer Center Hôpital St Louis/Université Paris Onconova Therapeutics, Inc.