Robert W. Fulton, J. T. Saliki, A. W. Confer, Lurinda J. Burge, J. M. d Offay, R. G. Helman, S. R. Bolin, J. F. Ridpath, Mark E.

Similar documents
Biotype, Genotype, and Clinical Presentation Associated With Bovine Viral Diarrhea Virus (BVDV) Isolates From Cattle

TOC INDEX. Bovine Viral Diarrhea (BVD) Jan V. van den Hurk. Take Home Message. Introduction

Research Article Isolation and Genetic Analysis of Bovine Viral Diarrhea Virus from Infected Cattle in Indiana

CHALLENGE VIRUS TREATMENT GROUP PI POSITIVE VIREMIA POSITIVE LEUKOPENIA POSITIVE. Vaccinates 1/22 (4.5%) 0/22 (0%) 8/22 (36.4%)

Introduction. Transmission

Control of Pestivirus Infections in Cattle. P.D. Kirkland, Virology Laboratory, EMAI

The success story of BVD virus

Bovine Viral Diarrhea FAQs

TOC INDEX. Bovine Respiratory Syncytial Virus. John A. Ellis. Take Home Message. Cause and Spread

Investigating respiratory disease

Onset of Protection from Experimental Infection with Type 2 Bovine Viral Diarrhea Virus Following Vaccination with a Modified-Live Vaccine*

Response to Modified Live and Killed Multivalent Viral Vaccine in Regularly Vaccinated, Fresh Dairy Cows*

BVD Overview. The Disease, Management & Control

Bovine Virus Diarrhea Virus. Jessica Seate LCS 630 Rotation

YOU NEED CHOICES. Elanco now brings you a comprehensive line of cattle vaccine health management solutions for your operation.

Product Manual. Omni-Array Sense Strand mrna Amplification Kit, 2 ng to 100 ng Version Catalog No.: Reactions

Influence of Weaning Vaccine Selection on Pre- Breeding Vaccine Options. Paul H. Walz, DVM, PhD Auburn University College of Veterinary Medicine

Midi Plant Genomic DNA Purification Kit

Roberto A. Palomares DVM, MS, PhD, Dip ACT

NATIONAL BVD CONTROL PROGRAMME

Bovine viral diarrhea virus in alpaca: abortion and persistent infection

USDA field safety study summary: 1

USDA field safety study summary: 1. Intense safety in young calves: 2. High-risk stocker cattle study: 3

TOC INDEX. Infectious Bovine Rhinotracheitis. S. van Drunen Littel - van den Hurk. Take Home Message. Introduction

Recommended laboratory tests to identify influenza A/H5 virus in specimens from patients with an influenza-like illness

The making of Bovela - a vaccine against bovine viral diarrhea

BVDV GENOMIC ORGANIZATION AND PROTEINS. Eugene Berry Department of Veterinary & Microbiological Sciences, North Dakota State University

Transfection of Sf9 cells with recombinant Bacmid DNA

For in vitro Veterinary Diagnostics only. Kylt Rotavirus A. Real-Time RT-PCR Detection.

Guideline on the procedure to be followed when a batch of a vaccine finished product is suspected to be contaminated with bovine viral diarrhoea virus

A study of Pestivirus in eastern Australia:

AquaPreserve DNA/RNA/Protein Order # Preservation and Extraction Kit 8001MT, 8060MT

CONTAMINATION OF FOETAL BOVINE SERUM WITH BOVINE VIRAL DIARRHOEA VIRUS (BVDV)

TECHNICAL BULLETINMay 2016

Diagnostic investigation of bovine viral diarrhea infection in a Minnesota dairy herd

Investigation of the genetic differences between bovine herpesvirus type 1 variants and vaccine strains

J Vet Diagn Invest 17: (2005)

Bovine viral diarrhea virus (BVD

E.Z.N.A. SQ Blood DNA Kit II. Table of Contents

1. Intended Use New Influenza A virus real time RT-PCR Panel is used for the detection of universal influenza A virus, universal swine Influenza A vir

TECHNICAL BULLETIN. INFORCE 3: Prevents respiratory disease caused by bovine respiratory syncytial virus. INF January 2016

Sensitivity and specificity of multiple technologies for the detection of confirmed persistently BVDV infected cattle from a feed yard in South Texas

Effectiveness of Vaccination Programs in Replacement Heifers

Product Contents. 1 Specifications 1 Product Description. 2 Buffer Preparation... 3 Protocol. 3 Ordering Information 4 Related Products..

Analysis of variation of bovine viral diarrhoea virus E2 sequence following transplacental infection of cattle

Effect of maternally-derived immunity in the development of humoral immune responses to vaccination and subsequent challenge with BVDV

Hepatitis B Virus Genemer

SUPPLEMENTARY INFORMATION

Western Veterinary Conference 2013

Cross-Reactivity to Field Isolates of Canine Influenza Virus by a Killed Canine Influenza Virus (H3N8, Iowa05) Vaccine

Product Contents. 1 Specifications 1 Product Description. 2 Buffer Preparation... 3 Protocol. 3 Ordering Information 4

PEDV Research Updates 2013

Product # Kit Components

Classical swine fever (CSF) - also known as hog cholera, is a highly contagious multisystemic, haemorrhagic, viral disease of swine.

ABSTRACT Researches on respiratory virosis of cattle

Norgen s HIV proviral DNA PCR Kit was developed and validated to be used with the following PCR instruments: Qiagen Rotor-Gene Q BioRad icycler

Jin-An Huang VMRD Beijing

Norgen s HIV Proviral DNA PCR Kit was developed and validated to be used with the following PCR instruments: Qiagen Rotor-Gene Q BioRad T1000 Cycler

Due to the non-availability of a good diagnostic tool, outbreaks however remain undiagnosed in the country.

Isolation and identification of Mycoplasma gallisepticum in chickensbn from industrial farms in Kerman province

Blijft BVDV altijd BVDV? Niets is zo veranderlijk als een RNA virus. Frank van der Meer November 30, 2016

EVALUATION OF IMMUNE RESPONSE AND PERFORMANCE IN STEERS OF KNOWN GENETIC BACKGROUND VACCINATED AND CHALLENGED WITH BOVINE VIRAL DIARRHEA VIRUS

PEDV Research Updates 2013

Influenza-Associated Pediatric Mortality rev Jan 2018

G. INNOCENT *, I. MORRISON, J. BROWNLIE AND G. GETTINBY. (Accepted 3 February 1997)

7 VETERINARY PROTOCAL INSTROUDUTION

EXO-DNA Circulating and EV-associated DNA extraction kit

ELANCO CATTLE VACCINE PORTFOLIO

Lumino Firefly Luciferase Assay

PREVALENCE OF STOCKER CALVES PERSISTENTLY INFECTED WITH BOVINE VIRAL DIARRHEA VIRUS IN THE SOUTHEAST DETERMINED

Geneaid DNA Isolation Kit

THIS ARTICLE IS SPONSORED BY THE MINNESOTA DAIRY HEALTH CONFERENCE.

BOVINE VIRAL DIARRHOEA

Kit Components Product # EP42720 (24 preps) MDx 2X PCR Master Mix 350 µl Cryptococcus neoformans Primer Mix 70 µl Cryptococcus neoformans Positive

In the Name of God. Talat Mokhtari-Azad Director of National Influenza Center

PRODUCT: RNAzol BD for Blood May 2014 Catalog No: RB 192 Storage: Store at room temperature

EXO-DNAc Circulating and EV-associated DNA extraction kit

Antigenic characterization of Brazilian bovine viral diarrhea virus isolates by monoclonal antibodies and cross-neutralization

Laboratory diagnosis of congenital infections

How can it affect Your operation?

CHARACTERISATION OF INFECTIOUS BURSAL DISEASE VIRUS AND DETERMINATION OF POSSIBLE VACCINE STRAIN(S) IN KENYA

Pinpoint Slide RNA Isolation System II Catalog No. R1007

Immunology, Vaccines, and Prevention of Salmonella

Environmental and management factors influencing BVDV antibody levels and response to vaccination in weanling calves

Roche Molecular Biochemicals Application Note No. HP 1/1999

Laboratory Diagnosis of Avian Influenza and Newcastle Disease

ABIOpure TM Viral (version 2.0)

SURVEILLANCE TECHNICAL

Identification of Microbes Lecture: 12

EVALUATION OF THE EFFECTIVENESS OF A 7% ACCELERATED HYDROGEN PEROXIDE-BASED FORMULATION AGAINST CANINE PARVOVIRUS

The second-most significant disease in dairy operations. 6 22% of unweaned heifer deaths 6 46% of weaned heifer deaths 6

PEDV Research Updates 2013

Rubella Latex Agglutination Test

MasterPure RNA Purification Kit

Duration of immunity of a four-valent vaccine against bovine respiratory diseases

Phosphate buffered saline (PBS) for washing the cells TE buffer (nuclease-free) ph 7.5 for use with the PrimePCR Reverse Transcription Control Assay

Human Immunodeficiency Virus type 1 (HIV-1) p24 / Capsid Protein p24 ELISA Pair Set

Equine Herpesvirus (EHV) Myeloencephalopathy

Control of Bovine Virus Diarrhoea (BVD)

PERSISTENT INFECTIONS WITH HUMAN PARAINFLUENZAVIRUS TYPE 3 IN TWO CELL LINES

Transcription:

J Vet Diagn Invest 12:33 38 (2000) Bovine viral diarrhea virus cytopathic and noncytopathic biotypes and type 1 and 2 genotypes in diagnostic laboratory accessions: clinical and necropsy samples from cattle Robert W. Fulton, J. T. Saliki, A. W. Confer, Lurinda J. Burge, J. M. d Offay, R. G. Helman, S. R. Bolin, J. F. Ridpath, Mark E. Payton Abstract. One hundred three bovine samples submitted to the Oklahoma Animal Disease Diagnostic Laboratory (OADDL) that were positive for bovine viral diarrhea virus (BVDV) were typed by a nested reverse transcription polymerase chain reaction for BVDV genotypes. These BVDV samples included supernatants from virus isolation (79), serums (17), and buffy coats (7). The biotype, cytopathic () or noncytopathic (), was determined by cell culture virus isolation. Twenty-eight of 103 samples were submitted for herd screening for BVDV, 32 from OADDL necropsy cases, and 43 from live cattle with varied clinical conditions. Two samples contained 2 bands indicating presence of both BVDV types 1 and 2. Of the 105 BVDV samples, 26 were type 1 strains (24.8%), 38 were type 1 strains (36.2%), 10 were type 2 strains (9.5%), and 31 were type 2 strains (29.5%). From the 105 BVDV isolates, biotypes were isolated more frequently (69, 65.7%) than biotypes (36, 34.3%), and type 1 genotypes were more frequently isolated (64, 61.00%) than type 2 genotypes (41, 39.0%). The strains were more common than in herd screening samples. Cattle with respiratory disease history at time of sampling had more than biotypes and more type 1 than type 2 genotypes. Of the necropsy cases, more were type 1 than type 2 genotypes for the respiratory cases with fibrinous pneumonia, more were type 1 than type 2 genotypes in cattle with enteritis/colitis without systemic lesions, and more were than biotypes in cattle with enteritis/colitis with systemic lesions. No biotype was isolated from serum samples. Bovine viral diarrhea virus (BVDV) causes infection and disease in cattle. The BVDV is a singlestranded RNA virus and is a member of the Pestivirus genus of the viral family Flaviviridae. 6 Other pestiviruses of veterinary medical importance are the hog cholera virus (HCV) and Border disease virus (BDV) affecting sheep. The BVDVs are separated according to biotypes and genotypes. The biotypes cytopathic () or noncytopathic () are based on the presence or absence of visible cytopathic effects in infected cell cultures. 2 Genotypes (types 1 and 2) are viruses with genetic variations detected by polymerase chain reaction (PCR) assays and antigenic distributions. 7,9 has been further subdivided into types 1a and 1b. 8 BVDV affects cattle of all ages including fetuses of susceptible heifers and cows. 2 Numerous clinical forms of BVDV infection occur in cattle, affecting ei- From the Departments of Infectious Diseases and Physiology (Fulton, Saliki, Burge, d Offay) and Anatomy, Pathology, and Pharmacology (Confer, Helman), and the Oklahoma Animal Disease Diagnostic Laboratory (Saliki, Helman), College of Veterinary Medicine, and the Department of Statistics (Payton), Oklahoma State University, Stillwater, OK 74078, and the Enteric and Food Safety Research Unit, National Animal Disease Center, USDA, Agricultural Research Service, PO Box 70, Ames, IA 50010 (Bolin, Ridpath). Received for publication November 24, 1998. ther single or, more commonly, multiple organ systems. 2 These infections may include inapparent infection and recovery, acute disease (digestive, respiratory, and hemorrhagic forms [ biotypes]), chronic disease with multiple organs involved, mucosal disease (MD), fetal infections (abortions, stillbirths, congenital defects, calves born immunotolerant and persistently infected (PI), and PI cattle. Cattle that are PI have biotypes only and are considered reservoirs of infection because they shed virus in most all secretions throughout their lifetime. 2 Diagnosis of BVDV disease in cattle includes gross and microscopic lesions in numerous organs indicating BVDV disease. Other diagnostic criteria specific for the virus include a 4-fold rise in BVDV antibody titers in paired sera collected 3 4 weeks apart indicating active infection; presence of BVDV antibody in fetal fluids and/or precolostral samples indicating infection during pregnancy; fluorescent antibody staining of frozen tissues detecting viral antigen; immunohistochemistry testing for BVDV antigen in fixed tissues; PCR detection of BVDV-specific genomic material in tissues, serum, and/or blood cells; and virus isolation in cell cultures. The prevalence of the various genotypes and biotypes in diagnostic laboratories is important to both the diagnostician and the referring veterinarian. Also, 33

34 Fulton et al. determination of the relative occurrence of both biotypes and genotypes isolated from various disease forms of BVDV infection is useful. The occurrence of BVDV type 2 isolates is also important because most all licensed BVDV vaccines in the USA contain type 1 strains alone. However, a recent report indicated that a single dose of a modified live virus (MLV) BVDV type 1 vaccine protected young calves from clinical signs of disease associated with BVDV type 2 isolates. 5 Possibly, the presence of type 2 strains in type 1-vaccinated cattle may reflect lack of complete protection by these type 1 vaccines, vaccine escape strains, the mutability of the virus, and/or recombination events forming new viruses. The purpose of this study was to identify the genotype, type 1 or 2, in BVDV-positive samples submitted to a diagnostic laboratory and to categorize the biotypes/genotypes identified in various clinical presentations and necropsies. The BVDV-positive samples were typed by a nested reverse transcription polymerase chain reaction (RT-PCR) test. 11 Materials and methods Viruses. One hundred three samples from the Oklahoma Animal Disease Diagnostic Laboratory (OADDL) that were positive for BVDV by viral isolation procedures as described were tested in the study. 10 Samples were inoculated into 24- well cell culture plates previously seeded with bovine turbinate cells. Inoculated cultures were observed for cytopathology and were subpassaged after 5 7 days. After the second passage for 5 7 days, the cultures were tested for BVDV by an indirect fluorescent antibody procedure. Monoclonal antibodies, MAbs 15c5 and 20.10.6, were used as the primary antibody reactive with BVDV strains. These samples included supernatants from the viral isolation procedure (n 79) as well as serums (n 17) and buffy coats (n 7) that were BVDV positive by the viral isolation. The biotype was reported on the basis of visual cytopathic effects in cell culture. These viruses were from accessions submitted from November 1994 through January 1998 and were those grown in cell culture and in storage with adequate history from the referring veterinarian. PCR assay. Viral RNA was extracted and prepared as described with minor modifications. 8 Total RNA from freeze thaw extracts of infected monolayers or diluted vaccines was prepared by acid guanidium thiocyanate/phenol/ chloroform extraction. This procedure was modified by using a 5:1 mixture of phenol/chloroform, ph 4.5. Briefly, a 375- l aliquot from the virus-containing fluids was added to a 1.5-ml microfuge tube, and 1.5 l of 10 mg/ml t-rna was added. Then 375 l denaturing working solution (0.35 ml 2- mercaptoethanol (2-ME)/50 ml) and 75 l 2 M sodium acetate were added and mixed by gently inverting the tube. A volume of 750 l phenol/chloroform, ph 4.5, was added, with mixing by inverting the tube gently followed by incubation on ice for 15 min. The tube was then centrifuged at 10,000 g for 15 min with the aqueous phase (about 700 l) transferred to a fresh 1.5-ml tube. The RNA was precipitated by adding 1 volume of 100% isopropanol and incubated at 20 C for 30 min. The mixture was then centrifuged for 10 min at 10,000 g with the supernatant subsequently discarded. The pellet was dissolved in 300 l denaturing working solution and 1 volume 100% isopropanol was added. After 30 minutes incubation at 20 C, the total volume was centrifuged at 10,000 g for 10 minutes and the supernatant discarded. The pellet was resuspended in 75% ethanol, vortexed, incubated 10 15 min at room temperature, and centrifuged at 10,000 g for 5 min. The supernatant was discarded, and the pellet was then dried 5 10 min in speed-vac and resuspended in 15 l diethylpyrocarbonate (DEPC)-treated DI H 2 O. The material was then stored at 70 C until used. The consensus primers P1 and P2 (826-bp region) were those selected from the EO region of the pestivirus genome that share maximum homology with all 3 pestiviruses (BVDV types 1 and 2 and BDV) and have no homology to other regions of the pestivirus genomes. 11 From that consensus region (826 bp), 3 type-specific primers, TS1, TS2, and T3, were prepared. a The base pairs for the amplified DNA for the T primers were TS1, 566; TS2, 488; and TS3, 223. The consensus PCR primers P1/P2 amplified the 826-bp region. In the second reaction, nested PCR, the consensus PCR product was then reacted with TS1, TS2, TS3, and P2. The TS1/P2 product was specific for BDV, TS2/P2 for BVDV type 2, and TS3/P2 for BVDV type 1. 11 The components in the PCR kit b were used including the cycles, reaction times, and temperatures listed in the kit. Reagents included murine leukemia virus (MuL V) reverse transcriptase (50 U/ l), RNase inhibitor (20 U/ l), DNA polymerase (5U/ l), 10 mm each of datp, dctp, dgtp, and dttp, and 10 PCR buffer II (500 mm KCl, 100 mm Tris- HCl, ph 8.3) in 25 mm MgCl 2 solution. For the RT, a tube of 20 l contained 4 l 25 mm MgCl 2 ;2 l 10 PCR buffer II; 2 l DEPC-treated DIH 2 O; 2 l each of dgtp, datp, dctp, and dttp; 1 l RNase inhibitor; 1 l MuL V reverse transcriptase; 1 l P2; and 1 l sample. The RT reaction was carried out at 42 C for 15 min followed by an initial denaturation at 99 C for 5 min and then 5 C for 5 min cooling. Then 80 l of the following was added to the tube: 4 l 25 mm MgCl 2 solution, 8 l 10 PCR buffer II, 65.5 l DEPCtreated DIH 2 O, 0.5 l DNA polymerase, 1 l DEPC-treated DIH 2 O (instead of P2), 1.0 l P1, and 20 l of RT reaction mixture for a total volume of 100 l. This consensus PCR reaction was performed at 95 C for 105 sec (initial step). The PCR reaction continued for 35 cycles of 95 C for 15 sec (melt) and 60 C for 30 sec (anneal-extend). A final step of extension at 72 C for 7 min completed the amplification process. The products were stored at 4 C. The amplified products (consensus PCR product) were analyzed on 2.0% agarose gels after electrophoresis. A second reaction was performed on the consensus PCR product with type-specific primers. 11 The reaction mixture contained 100 l with the following components: 8 l 25 mm MgCl 2 solution; 10 l 10 PCR buffer II; 68.5 l DEPC-treated DI H 2 O; 2 l each of the deoxynucleotides; 0.5 l DNA polymerase; 1 l each of the primers P2, TS1, TS2, and TS3; and 1 l of sample (1:500 in DEPC-treated DI H 2 O). The sample was subjected to 25 cycles of 94 C for 1 min (denaturation), 50 C for 45 sec (primer annealing), and 72 C for 45 sec (primer extension). The reaction prod-

BVDV biotypes and genotypes 35 Table 1. Age of cattle at time of presentation for virus isolation. Table 3. BVDV isolates from cattle necropsy cases. Presentation cattle Age (months) Minimum Maximum Mean Herd screening 20* 3 36 9.8 Respiratory disease 24 3 24 6.8 Watery diarrhea Younger 10 2 24 8.2 Older 7 60 96 80.4 Bloody diarrhea 2 7 36 NA Abortion 10 15 84 35.4 Weight loss/poor doer 5 5 84 NA Nervous system 2 24 84 NA Found dead 1 6 NA Depression/nasal/oral/coronary band ulcers 1 8 NA * One 8 year old was eliminated. NA not applicable. Table 2. Clinical presentation of BVDV-positive cattle at time of sample collection. Presentation isolates Herd screening 28 4* 14 1 10 Respiratory 30 7 14 3 7 Diarrhea watery 20 9 4 1 6 Diarrhea bloody 3 2 1 0 0 Abortion 11 1 2 2 6 Weight loss/poor doer 7 2 1 2 2 Nervous system 2 0 1 1 0 Found dead 1 0 1 0 0 Depression, nasal/oral/coronary band 1 1 0 0 0 Total 103 26 38* 10 31* * Statistically significant differences noted in Results section. Sample contained 2 bands indicating both types 1 and 2. Lesions isolates Pneumonia Fibrinous 11* 5 4 1 1 Hemorrhagic/necrotic 1 0 0 0 1 Enteritis/colitis Without systemic lesions 9 5 3 0 1 With systemic lesions 6 5 0 1 0 Abortion 4 0 1 0 3 Found dead/autolytic 1 0 1 0 0 Total 32 15 9 2 6 * Statistically significant differences noted in Results section. ucts were stored at 4 C. The reaction produced was electrophoresed on a 2% agarose gel. The position of the priming with each pestivirus type-specific primer was designed such that the size of the nested DNA produced was characteristic for each pestivirus type. 11 Review of case records. The accession records by the submitting veterinarian were reviewed to determine the clinical presentation/diagnosis for the animal at the time samples were collected for antemortem testing or at the time of necropsy. Also, the OADDL necropsy records at completion of gross and microscopic examination and viral/bacterial isolation testing were reviewed. The following data were included in addition to those listed above: age of animal, date of submission, state of origin of accession, vaccination history (if known) and type of vaccine, and bacterial and viral isolations found in addition to BVDV. Statistical analysis. Comparisons were made between genotypes (combining and for each genotype) and between biotypes (combining types 1 and 2 for each biotype). For each of the presentation categories, exact binomial tests were performed to test the null hypothesis that the proportion of (vs. ) from the samples was equal to 0.5. 1 This test was repeated for testing the null hypothesis that the proportion of type 1 (vs. type 2) was equal to 0.5. Exact tests were performed because of the small sample size utilized in this experiment. Because of the discrete nature of an exact test on this type, the P-values were adjusted by a method as described. 1 Results Age and location of origin. The 103 bovine samples sent to the OADDL came from 8 different states. The states and numbers of samples included Oklahoma (71), Kansas (14), Missouri (7), Arkansas (3), Wyoming (3), Texas (3), New Mexico (1), and Iowa (1). The ages of 82 of the 103 cattle were determined from the available records (Table 1). There was a range of ages for the various presentations. The 4 presentations with the greater percentage of known ages were herd screening (20), respiratory diseases (24), watery diarrhea (17), and abortion (10). There were 2 age groups for watery diarrhea, young and older. All respiratory disease (24) and watery diarrhea cases (10) were in the younger cattle 2 years old. As would be expected for screening of herds for BVDV, the animals ages ranged from 3 to 36 months with the exception of 1 8-year-old animal. Viral isolates. One hundred three bovine samples submitted to the OADDL were positive for BVDV by cell culture isolation to detect BVDV antigen (Tables Table 4. BVDV biotypes and genotypes in diagnostic samples direct for PCR. Sample Supernatants from virus isolation 19 28 9 23 Serums 0 10 0 7 Buffy coats 7 0 1 1 Total 26 38 10 31

36 Fulton et al. Table 5. Sample BVDV biotypes and genotypes from different sources. isolates Serum 26 0 17 0 9 Buffy coat 45 14 12* 7 14* Organ pool 21 6 7 2 6 Lung 3 0 1 1 1 Nasal swab 2 1 1 0 0 Fetal tissue swab 1 0 0 0 1 Spleen 2 2 0 0 0 Intestine 3 3 0 0 0 Total 103 26 38* 10 31* * Two samples contained 2 bands indicating both types 1 and 2. 2 4). Twenty-eight of 103 samples (27.2%) were submitted for herd screening from BVDV-infected cattle (Table 2), 32 (31.1%) from OADDL necropsy cases (Table 3), and 43 (41.7%) from cattle with various clinical conditions, at antemortem (Table 2), those not submitted for screening or necropsy cases. Biotypes and genotypes. In this PCR assay, 60 of 103 (58.3%) samples had an observable band at electrophoresis of the consensus PCR product. However, all 103 samples had observable bands with the typespecific product. Two samples contained 2 bands with the type-specific PCR product, indicating presence of both types 1 and 2 BVDV. Thus, 105 BVDV-positive tests were detected by the PCR assay (Table 2). There were more (69, 65.7%) than biotypes (36, 34.3%) (P 0.05). There were more type 1 genotypes (64, 61.0%) than type 2 genotypes (41, 39%) (P 0.05). The BDV, a type 3 ruminant pestivirus, was not detected in this group by PCR. Of the 105 BVDV, 26 were type 1 strains (24.8%), 38 were type 1 strains (36.2%), 10 were type 2 strains (9.5%), and 31 were type 2 strains (29.5%) (Table 2). Clinical presentation at sampling. Several clinical conditions, including herd screening for BVDV-infected cattle, animals with single and multiple organ diseases, animals found dead on premises or presented at necropsy, and abortion, formed the basis for submission of samples to the OADDL (Table 2). In several categories, significant differences were found between the prevalence of genotypes (type 1 vs. type 2 regardless of biotype) or the prevalence of biotypes ( vs. regardless of genotype). biotypes were isolated more frequently than biotypes (P 0.05) and type 1 genotypes were isolated more frequently than type 2 genotypes (P 0.05) in cattle with respiratory disease. In healthy cattle screened for BVDV, biotypes were isolated more frequently than biotypes (P 0.05). Sources of samples submitted for virus isolation/genotyping. The tissue component for the virus isolation and the distribution of BVDV are summarized in Tables 4 and 5. Two samples of buffy coats contained 2 bands each indicating both type 1 and type 2 strains in the sample. One sample was submitted for herd screening and the other was from an animal with signs of respiratory disease (Table 2). No statistically significant differences were found in the genotypes/ biotypes from the various sources with one exception; from serum only strains were isolated (Tables 4, 5). Twenty-six samples were positive for BVDV genotypes direct from serum or buffy coats (Table 4). These 26 positive PCR samples were identified by viral isolation also. Necropsy cases. Thirty-two BVDVs were isolated from necropsy cases (Table 3). These included 15 type 1 strains, 9 type 2 strains, 2 type 2 strains, and 6 type 2 strains. Of the total 32 cases, there were more type 1 than type 2 genotypes (P 0.05). Statistically significant differences between genotypes and between biotypes were detected for several organ systems. More type 1 than type 2 genotypes were isolated from cattle with fibrinous pneumonia (P 0.05). Cattle with enteritis/colitis without systemic lesions had more type 1 than type 2 genotypes (P 0.05). Cattle with enteritis/colitis with systemic lesions such as digestive tract ulcers and lymphoid necrosis had more than biotypes (P 0.05). One animal in the study had hemorrhagic lesions (pneumonia) and an type 2 strain was isolated. All 4 BVDVs isolated from fetal tissues were. Bacterial isolation and other viruses in BVDV-positive necropsy cases. For 8 of 11 fibrinous pneumonia cases, infectious agents besides BVDV were isolated. Pasteurella haemolytica was isolated alone in 5 cases. Parainfluenza-3 virus was isolated from 1 of these cases. Haemophilus somnus was isolated in 1 case. Three cattle did not have bacteria isolated from BVDV-positive lesions of fibrinous pneumonia. In 2 cases from the same feedlot, P. haemolytica, Pasteurella multocida, and Actinomyces pyogenes were each isolated from both cases. Three of 15 necropsy cases with enteritis/colitis were positive for Salmonella spp. Two of these animals had watery diarrhea and no systemic lesions, whereas the other animal had bloody diarrhea and oral ulcers. Vaccination history. The vaccination history was determined by review of the submitted records. Fourteen BVDV-positive samples were from cattle that had received a BVDV vaccine. In some cases, the date of vaccination and vaccine type (MLV or inactivated) given were not known. No relationship between vaccine strain and isolated virus was detected. Among each vaccine group, and biotypes and type 1 and type 2 genotypes were isolated.

BVDV biotypes and genotypes 37 For the MLV vaccinates, there were 5 BVDV samples. Three type 1 strains were isolated from calves 30 90 days postvaccination (DP), 1 type 1 strain from a calf 17 DP, and 1 type 2 strain from a calf 4 DP. Among the calves receiving inactivated vaccines, there were 4 BVDV samples. One type 1 strain was from a calf 150 DP, 1 type 1 strain was from a calf with unknown vaccination date, 1 type 2 strain was from a calf 14 DP, and 1 type 2 strain was from a calf with unknown vaccination date. Five BVDV samples were from calves where the records did not indicate type of vaccine administered. Three type 1 strains were from calves 32 131 DP, 1 type 1 strain was from a calf 14 DP, and 1 type 2 strain was from a calf with unknown vaccination date. Discussion Greater numbers of biotypes and type 1 genotypes than biotypes and type 2 genotypes were found in the 105 typed BVDV samples from the diagnostic laboratory BVDV isolates. This study is one of the first studies to examine for the presence of both types 1 and 2 BVDV genotypes among BVDV isolates. The recent BVDV outbreak in Canada was found to have increased cases of BVDV disease in cattle. 4 Use of PCR and specific monoclonal antibody tests have identified the presence of 2 genotypes with antigenic differences separating the 2 types. 7,9 Prior to these studies, BVDV reporting was based on biotype differences, or. For example, a study of BVDV isolations by a diagnostic laboratory from 1989 to 1995 (yearly basis) indicated a range of BVDV of 66.1% to 87.7% compared with 12.3% to 33.9% strains. 4 In this current study, 65.7% were strains and 34.3% were strains. In the prior study of 104 Ontario BVDV and strains isolated from 1981 to 1994, type 2 genotypes were present as early as 1981 (4/14), and all were strains. In that study, 104 isolates from 1981 to 1994 were typed (PCR), including both and strains. Overall, 80 isolates were type 2 (76.9%) and 24 were type 2 (23.1%) strains from 104 BVDV strains. In addition, in that study, 61 of 64 BVDV isolates from a 1993 1995 disease outbreak in Canada were type 2 (95.3%). This typing of BVDV by PCR gives additional information as to the epidemiology of BVDV in cattle and, particularly, the occurrence of these genotypes/biotypes in diagnostic laboratory accessions. Numbers of a particular biotype or genotype among BVDV isolates may increase on the basis of a particular involved organ system. In the present report, the biotypes/genotypes based on clinical presentation of animal for diagnosis and the necropsy diagnosis were reported. More biotypes and type 1 genotypes were reported from cattle with respiratory disease at clinical presentation. Also, cattle with necropsy lesions of fibrinous pneumonia had more type 1 than type 2 genotypes. Interestingly, cattle with necropsy lesions of enteritis/colitis with systemic lesions had more strains than strains. This difference would be expected because these necropsy lesions are consistent for those of MD. 2 MD-affected cattle have the strains present along with those lesions. The pathogenesis of the MD form of BVDV disease is believed to occur when strains superinfect cattle PI with BVDV. It is thought that there is a distinct relationship of the / pair for the disease to occur. This current study supports the diagnosis of MD when specific lesions and the strains are present. The tissue source for sample submission may affect recovery of certain biotypes. Obviously, tissue sample collection at necropsy would coincide with observed gross or anticipated microscopic lesions. In this current study, differences were observed in recovery of BVDV biotypes. From the sera, no strains were detected, only strains were recovered. Both and strains were found in buffy coat samples. Therefore, if one were looking for in the blood, the buffy coat sample would be the preferred sample. Vaccination status for an affected animal should be determined to interpret diagnostic laboratory results. Finding BVDV in a sample from a vaccinated animal poses an interpretation dilemma for the clinician. This is especially important in animals within 2 weeks after vaccination with a MLV vaccine containing BVDV. Possible interpretations of such a scenario include 1) the virus may be of MLV vaccine origin; 2) the vaccine, either MLV or inactivated, may not have protected the animal against viremia and spread in the vaccinate because current licensure does not require efficacy of protection against viremia; 3) vaccines containing only type 1 genotypes may not protect against type 2 strains; and 4) the vaccine may have contained an adventitious BVDV such as strain because of viral contamination from cell culture sera. 3 In the present study, 5 BVDV isolates were found from cattle receiving MLV vaccine. Only 1 isolate was a type 2 strain, from a calf vaccinated within 2 weeks. Because no MLV vaccine contained type 2 BVDV at the time, the isolate was assumed not to be of vaccine origin. The purpose of this study was to determine the presence of types 1 and 2 BVDV genotypes from accessions submitted to a state diagnostic laboratory. The BVDV biotype was reported by the diagnostic laboratory on the basis of viral isolation in cell culture. In

38 Fulton et al. addition, the occurrence of biotypes/genotypes for animals with various clinical presentations and necropsy diagnoses was determined. Source of sample (tissue), state of origin, vaccination history, and age of affected animals aid in the assessment of the data. Although this study was not designed as an epidemiological study for prevalence/incidence of BVDV in cattle in a state such as Oklahoma, it provides important information for the clinician and diagnostician responsible for diagnosis of cattle diseases/infections that may include BVDV in the differential diagnosis. In addition, this study reaffirms that type 2 BVDV isolates are present in various clinical forms, often relating to severe illness and mortality. Appropriate control measures, including vaccines protecting against type 2 BVDV strains, must be considered. Acknowledgements We thank the OADDL personnel for viral isolations and for making the medical records available for review. Also, we appreciate the support of Diana Moffeit for preparation/ typing of this manuscript. Sources and manufacturers a. Recombinant DNA/Protein Resource Facility, Department of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, OK. b. Gene AMP RNA PCR kit, Amplitaq DNA Polymerase, Perkin Elmer, Foster City, CA. References 1. Agresti A: 1990, Categorical data analysis. Wiley and Sons, New York, NY. 2. Baker JC: 1987, Bovine viral diarrhea virus: a review. J Am Vet Med Assoc 190:1449 1458. 3. Bolin SR, Ridpath JF: 1998, Prevalence of bovine viral diarrhea virus genotypes and antibody against those viral genotypes in fetal bovine serum. J Vet Diagn Invest 10:135 139. 4. Carman S, van Dreumel T, Ridpath J, et al.: 1998, Severe acute bovine viral diarrhea in Ontario, 1993 1995. J Vet Diagn Invest 10:27 35. 5. Cortese VS, West KH, Hassard LE, et al.: 1998, Clinical and immunologic responses of vaccinated and unvaccinated calves to infection with a virulent type-ii isolate of bovine viral diarrhea virus. J Am Vet Med Assoc 213:1312 1319. 6. Francki RIB, Fauquet CM, Knudsen DL, et al.: 1991, Classification and nomenclature of viruses. Fifth report of the International Committee on Taxonomy of Viruses. Arch Virol Suppl. 2:228. 7. Pellerin C, vanden Hurk J, Lecomte J, Tijssen P: 1994, Identification of a new group of bovine viral diarrhea virus strains associated with severe outbreaks and high mortalities. Virology 203:260 268. 8. Ridpath JF, Bolin SR: 1998, Differentiation of types 1a, 1b and 2 bovine viral diarrhea virus (BVDV) by PCR. Mol Cell Prob 12:101 106. 9. Ridpath JF, Bolin SR, Dubovi EJ: 1994. Segregation of bovine viral diarrhea virus into genotypes. Virology 205:66 74. 10. Saliki JT, Fulton RW, Hull SR, et al.: 1997, Microtiter virus isolation and enzyme immunoassays for detection of bovine viral diarrhea virus in cattle serum. J Clin Microbiol 35:803 807. 11. Sullivan DG, Akkina RK: 1995, A nested polymerase chain reaction assay to differentiate pestiviruses. Virus Res 38:231 239.