Novozymes Protease Products

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Strem Chemicals, Inc. www.strem.com Catalog # 06-3115 Esperase 8.0L Note: Sold in collaboration with Novozymes A/S for research purposes only. Esperase is an endo-peptidase with a broad specificity which performs well under alkaline conditions and at elevated temperatures, as compared to other microbial serine proteases. Applications include the hydrolysis of internal peptide bonds. The product is characterized by excellent performance at elevated temperatures and ph. Declared activity 8KNPU-E/g. Serine endoprotease that hydrolyzes internal peptide bonds. Color can vary from batch to batch. Color intensity is not an indication of enzyme activity. Packaging must be kept intact, dry and away from sunlight. Please follow the recommendations and use the product before the best before date to avoid the need for a higher dosage. ther Endoproteases products offered by Strem: 06-3110 Alcalase 2.4 L FG 06-3112 Alcalase 2.5L 06-3137 Savinase 12 T 06-3150 Savinase 16 L 06-3160 Neutrase 0.8 L 96-0224 Novozymes Endoprotease Screening Kit (contains 6 endoprotease enzymes) Lipase products offered by Strem: 06-3123 Novozym 435 06-3155 Lipozyme TL IM 06-3120 Novozym 40086 06-3105 Lipozyme CALB L 06-3118 Palatase 20000 L 06-3140 Lipozyme TL 100 L 06-3125 Resinase HT 06-3135 Novozym 51032 06-3100 Novocor AD L 96-0220 Novozymes Lipase Screening Kit (contains 9 lipase enzymes) Novozymes Protease Products Storage Kits should be optimally stored at 0-10C/32-50F. If stored above 25C/77F the samples should be used within 3 months. Introduction Proteases (EC 3.4.21.62) belong to the class of enzymes known as hydrolases, which catalyze hydrolysis of various bonds in presence of water. Proteases are also referred to as Peptidases or Proteinases. Proteases catalyze proteolysis of peptide bonds in polypeptides, proteins and selective hydrolysis of carboxylic esters and amino esters. There are different classes of Proteases, i.e. serine, threonine, cysteine, aspartate, glutamic acid and metallo proteases. 1

Figure 1. Proteolysis of a peptide bond. Description and optimum usage conditions Strem Catalog Number Product EC No. Specifity Format ptimal Conditions 06-3110 Alcalase 2.4 L FG 3.4.21.62 Serine 06-3112 Alcalase 2.5 L 3.4.21.62 Serine 06-3137 Savinase 12 T 3.4.21.62 Serine 06-3150 Savinase 16 L 3.4.21.62 Serine Liquid Liquid Granulate Granulate 30-65 C, ph 7-9 30-65 C, ph 7-10 30-70 C, ph 8-10 30-70 C, ph 8-10 Unit Activity Application 2.4 AU-A/g Stereoselective hydrolysis of proteins; used in transesterification and transpeptidation. 2.5 AU-A/g Stereoselective hydrolysis of proteins; used in transesterification and transpeptidation. 12 KNPU- S/g 16 KNPU- S/g Stereoselective hydrolysis of proteins, hydrolysis of strained amides Stereoselective hydrolysis of proteins, hydrolysis of strained amides 06-3115 Esperase 8.0 L 3.4.21.62 Serine Liquid ph 8-12.5 8 KNPU-E/g Hydrolysis of internal peptide bonds; characterized by excellent perfomance at elevated temperature and ph. 06-3160 Neutrase 0.8 L 3.4.22 Metalloprotease Liquid 40-50 C, ph 7 0.8 AU/g Kinetic resolution of amino esters * K = Kilo, AU = Anson Unit, NPU = Novo Protease Unit, 1 AU = 1NPU, ASNU = Asparaginace Unit, USP = Trypsin activity unit using USP Crystallized Trypsin Reference Standard The activity is determined relative to a protease A standard. The result is given in the same units as the standard. 1 ASNU is the amount of enzyme that produces 1 µmol Ammonia per minute under the standard reaction conditions. 2

Screening Procedure Listed below is recommended equipment for conducting the screens, however, ph-stat system gives more consistent results. Simple equipment Reaction vessel (e.g., 25 ml round bottom or Erlenmeyer flask or test tubes) ph-meter or ph-paper (range 5-9) Burette or calibrated addition funnel Propeller mixer or magnetic needle Advanced equipment Thermostat reaction vessel (e.g., 25 ml) Autotitrator/pH-stat system (ph-meter, automatic burette/addition funnel) Recording device (e.g., x/y-plotter) Propeller mixer Buffer Preparation 0.1M Potassium Phosphate Buffer at 25 o C 0.1M Sodium Phosphate Buffer at 25 o C ph K 2 HP 4 (ml) KH 2 P 4 (ml) ph Na 2 HP 4 (ml) NaH 2 P 4 (ml) 5.8 8.5 91.5 5.8 7.9 92.1 6.0 13.2 86.8 6.0 12.0 88.0 6.2 19.2 80.8 6.2 17.8 82.2 6.4 27.8 72.2 6.4 25.5 74.5 6.6 38.1 61.9 6.6 35.2 64.8 6.8 49.7 50.3 6.8 46.3 53.7 7.0 61.5 38.5 7.0 57.7 42.3 7.2 71.7 28.3 7.2 68.4 31.6 7.4 80.2 19.8 7.4 77.4 22.6 7.6 86.6 13.4 7.6 84.5 15.5 7.8 90.8 9.2 7.8 89.6 10.4 8.0 94.0 6.0 8.0 93.2 6.8 Dilute combined 1M stock solutions to 1 L with distilled H 2. Dilute combined 1M stock solutions to 1 L with distilled H2. Analytical method principles In-process reaction monitoring: Depending on substrate and product, different methods can be used for in process reaction monitoring. Thin Layer Chromatography (TLC) is a simple method for monitoring reaction progress and completion. 3

To quantitatively estimate product formation and consumption of reactant, HPLC or GC can be used for monitoring. Chiral HPLC is recommended to estimate chiral purity or consumption of isomers of racemic mixture. Final chiral purity can be obtained by analyzing product isolated by using an appropriate chiral column. Key parameters for Enantiomeric excess (ee) and Enantioselectivity (E) can be calculated from the areas in chiral HPLC: % ee = ((R-S)/(R+S)) 100 where R and S stand for the individual optical isomer in the mixture (and R +S = 1), where R = area for R isomer and S = area for S isomer. Kinetic Resolution Example 1. Kinetic Resolution by hydrolysis of Racemic Amino Ester/ Simple Racemic Ester 1, 2 Protease H or H Racemic amino ester / simple racemic ester (1-2 mmol) is solubilized in potassium phosphate buffer (0.1 M, 10 ml, ph 7.5) and reaction mixture is homogenized by stirring. o For liquid substrates, emulsion or suspension will be formed. o For solid substrates, solution is prepared by adding 10%v/v organic solvent* Protease Enzyme (50% wt/wt for solid enzyme or 10-20% v/v wrt to buffer for liquid enzyme) is added to reaction mixture. Reaction mixture is maintained at ph 7.5 by adjusting with 1N NaH. Typical reaction temperature is 25-30 o C and reaction time is 24-48 hours, depending on substrate. The reaction product is recovered by extraction or filtration. 4

* isopropanol (IP, tert-butanol, tetrahydrofuran (THF) or acetonitrile. Kinetic resolution of racemic amino ester can be converted into dynamic kinetic resolution leading to formation of catalytic quantities of aldehydes leading to formation of one of chiral amino acids in good yields. 2 Example 2. Kinetic resolution by hydrolysis of racemic carboxylic ester R2 R 3 Protease Phosphate buffer H or R 3 R 3 H Racemic ester (1-2 mmol) and potassium phosphate buffer (0.1 M, ph 7.0, 5 ml) is homogenized by stirring. Protease Enzyme (50% wt/wt with regards to substrate for solid enzyme or 10-20% v/v with regards to solvent mixture for liquid enzyme) is added under stirring. Reaction mixture is maintained at ph 7.0-9.0 by adjusting with 1N NaH. Typical reaction temperature is 20-35 o C and reaction time is 24-48 hours, depending on substrate. Reaction product is recovered by extraction or filtration. References 1. S.-T. Chen, W.-H. Huang, K.-T. Wang, J. rg. Chem. 1994, 59,7580 7581. 2. D. A. Schichl, S. Enthaler, W. Holla, T. Riermeier, U. Kragl and M. Beller Eur. J. rg. Chem. 2008, 3506 3512 The products and services described in this document are the responsibility of Novozymes Biopharma DK A/S, Krogshoejvej 36, 2880 Bagsvaerd, Denmark (company registration no. 29603537) - a wholly owned subsidiary of Novozymes A/S. The information in this document is based on data we believe to be reliable. They are offered in good faith, but without warranty, as conditions and methods of use of the products are beyond our control. Furthermore, laws, regulations, and/or third-party rights may prevent the recipient from using the information herein in a given manner. Thus, the information contained herein is provided AS IS and Novozymes makes no representation or warranty whatsoever with regard to said information, hereunder the accuracy, fitness for a particular purpose, noninfringement of intellectual property rights, or regulatory/legal compliance, unless otherwise agreed in writing. 5