External Quality Assessment Scheme General Bacteriology 1 and 2. List of samples and the microbes linked to the corresponding photo replies since 1.1.2008 Microbe Survey/ Sample Specimen type. Patient data Photo number Aerobic Gram-Positive Cocci Staphylococci, Micrococci and related bacteria Staphylococcus aureus 2008-1/2 Skin smear. Eczema. DM. 5 Staphylococcus aureus 2008-3/9 Pus. Impetigo. 3 and 4 Staphylococcus aureus 2009-4/16 BAL sample. Neutropenic patient 17,19,20 and 21 Staphylococcus aureus 2010-3/9 Pus from skin pustule / Pemphi- 2,3 and 4 gus neonatorum Staphylococcus aureus 2010-3/10 Middle ear effusion 5,6,7 and 9 Staphylococcus aureus 2011-1/1 Pus from infected surginal wound 1,2,3 Staphylococcus aureus 2012-2/5 Pus. Skin eczema 6-9,12 Staphylococcus aureus 2014-4/42 Pus. Conjuctivitis in a child. 7-9 Staphylococcus epidermidis 2008-1/3 Tissue sample. TEP 9 Staphylococcus epidermidis 2008-2/8 Pus. Open leg fracture. 12 Staphylococcus epidermidis 2009-1/3 Tissue sample. Corneal ulcer 10 and 11 Staphylococcus epidermidis 2009-4/14 Conjuntival sample 6 and 7 Staphylococcus haemolyticum 2011-2/6 Smear sample behind earflap 6,7,8,9,10 Staphylococcus hominis 2010-4/14 Pus. Leg ulcer. 6,7 and 9 Staphylococcus hominis 2012-3/10 Pus- Leg ulcer 6-11,17 Staphylococcus hominis 2013-3/23 Pus from mandibular fistula 25 Staphylococcus intermedius 2013-4/31 Dog bite 3-8 Staphylococcus lugdunensis 2010-1/3 Cardiac pacemaker electrode 16,17,18,19 and 20 Staphylococcus lugdunensis 2013-2/12 Middle ear effusion 11-14 Staphylococcus lugdunensis 2014-3/31 Abscess on a toe 1-7 Staphylococcus warneri 2011-4/14 Middle ear effusion 5,6,7,12,13 Staphylococcus warneri 2012-4/16 Venous catheter 30-34 Staphylococcus warneri 2013-3/22 Contact lens infection 15-16 Staphylococcus xylosus 2012-4/16 Venous catheter 30-32,35-36. Coagulase negative staphylococcus. 2008-4/14 Pus. Impetigo. 7,8 and 9 Micrococcus sp. 2008-2/6 Middle ear effusion. 5 and 6 Micrococcus sp 2011-2/6 Smear sample behind earflap 6,7,8,9,11 Micrococcus sp 2013-2/12 Middle ear effusion 15 Streptococci, Enterococci and related bacteria 2008-4/14 Pus. Impetigo. 7,8 and 9 2009-2/5 Middle ear effusion. 3,4and 9 2010-1/2 Pus Axillary eczema 8,9,10,11 and 12 2012-1/1 Pus. Pharyngeal abscess 2,3,4,5 2014-1/12 Pus. Smear sample from skin. 10,11,12,13,14 and 17
Beta-hem.streptococcus group B 2010-4/14 Pus.Leg ulcer. 6,7 and 8 (Streptococcus agalactiae) Beta-hem.streptococcus group B 2012-2/8 Amnionic fluid 29-32,39-40 (Streptococcus agalactiae) Beta-hem.streptococcus group C (Streptococcus dysgalactiae ssp 2011-3/11 Pus. Abscess. 16,17,18,19,20 21,22 equisimilis) Beta-hem.streptococcus group F (Streptococcus anginosus) 2011-4/16 Pus. Pulmonal empyema 21,22,23,24,25 26 Beta-hem.streptococcus group G 2008-1/ 1 Pus. Peritonsillary abscess 3 Beta-hem.streptococcus group G 2009-2/6 Pus. Groin abscess. 6,7,8 and 9 Beta-hem.streptococcus group G 2012-3/10 Pus. Leg ulcer 5-13 Enterococcus faecalis Bile specimen 19-20, 23-24 Enterococcus faecium 2009-1/4 Pus. Groin abscess. 14,15,16 and 17 Enterococcus faecium 2013-4/33 Pus from pelvic abscess 29-31,35-36 Enterococcus casseliflavus 2011-2/7 Tip of venous catether 13,14,15,16,17 Leuconostoc sp. 2013-4/32 Leg ulcer 10-14,20-23 2008-2/5 Cerebrospinal fluid 3 2009-1/1 Pus. Maxillay sinusitis 3 2010-4/13 Cerebrospinal fluid. Meningitis 3 and 4 2011-4/14 Middle ear effusion 6,7,8,9,10,11 2012-3/9 Middle ear effusion 2,3,4 2013-2/12 Middle ear effusion 7-10 2014-1/41 Middle ear effusion 2-5 Streptococcus viridans 2009-2/7 Pus Abscess 14 and 15 Streptococcus viridans 2009-4/14 Conjuctival sample 6 and 7 Streptococcus viridans 2010-4/15 Pus. Frontal sinusitis. 10 and 28 Streptococcus viridans 2014-4/14 Middle ear effusion 6,7,8,9,11 Streptococcus viridans 2014-3/32 Maxillary sinus excretion 8-12,16 Streptococcus viridans 2014-3/34 Pleural empyema 28-31,33-41 Streptococcus anginosus 2008-4/15 Aortic valve. Endocarditis. 11-12 Streptococcus anginosus 2011-4/16 Pus. Pulmonal empyema 21,22,23,24,25 26 Streptococcus parasanguis 2009-3/11 Cardiac valve. Endocarditis 15,16 and 17 Aerobic Gram-Positive Bacilli Actinomadura madurae 2012-1/3 Tissue specimen. Leg ulcer. 15-25 Arcanobacterium haemolyticum 2011-1/2 Purulent maxillary sinus excretion 5,6,7,8,9,10,11 Arcanobacterium haemolyticum 2014-3/32 Maxillary sinus excretion 8-15 Bacillus cereus 2009-1/3 Tissue sample. Corneal ulcer 10,11 and 12 Bacillus cereus 2011-2/6 Smear sample behind earflap 6,7,8,9,12 Bacillus megaterium 2014-1/12 Pus, Smear sample from skin 10-16,21 Corynebacterium sp.(diphtheroid) 2008-1/2 Skin smear. Eczema. DM. 5 and 7 Corynebacterium sp.(diphtheroid) 2008-2/6 Middle ear effusion 5 and 6 Corynebacterium jeikeum 2011-3/10 Pus. Leg burn 7,8,9,10,14,15 Corynebacterium jeikeum 2013-2/13 Tissue specimen 16-21 Corynebacterium ulcerans 2012-3/11 Troat specimens 18-25 Corynebacterium urealyticum 2010-2/7 Pus. Obstructed urether 12,13,14,15 and 16 Dermabacter hominis 2013-3/24 Smear sample from nipple 27-32 spearcing Listeria monocytogenes 2010-4/16 Amnionic fluid 30,31,32,33,34 35
Listeria monocytogenes 2014-1/11 Smear sample from placenta 3,4,5,6,7,8 Rhodococcus equi 2010-3/12 Sputum sample/ An immunocompromized patient 25,26,27,28 and 29 Aerobic Gram-Negativive Cocci Moraxella catarrhalis 2008-2/6 Middle ear effusion 5 and 6 Moraxella catarrhalis 2009-3/9 Middle ear effusion 3 and 4 Moraxella catarrhalis 2010-3/10 Middle ear effusion 5,6,7 and 9 Moraxella catarrhalis 2012-4/14 Middle ear effusion 6-12 Neisseria gonorrhoeae 2008-4/13 Synovial fluid 3,4 and 5 Neisseria gonorrhoeae 2011-2/8 Pus from infected big toe 18,19,20,21,22 Neisseria gonorrhoeae 2013-1/1 Pus from uterine cavity 3,4,5,6 Neisseria menigitidis 2012-1/2 Pus. Maxillary sinusitis 6-8,12-13 Neiseria mucosa 2011-1/2 Purulent maxillary sinus excretion 5,6,7,14,15 Neisseria sicca 2014-3/32 Maxillary sinus excretion 8-12,17-18 Aerobic Gram-Negative Bacilli Fermentative rods Acinetobacter baumannii 2008-4/16 Cerebrospinal fluid. 14,15,16 and 17 Acinetobacter baumannii 2009-4/14 Conjunctival sample. 6,7,8,9 and 10 Aeromonas hydrophila 2008-2/8 Pus. Open leg fractura. 12 Citrobactrer koseri (C diversus) 2012-3/12 Ascites fluid 28-34 Citrobacter werkmanii 2014-4/44 Pus from gall bladder 29-32,33-34,37 Cronobacter sakazakii See Enterobacter sakazakii Enterobacter aerogenes 2013-1/3 Bile specimen 19-22 Enterobacter cloacae 2008-4/16 Cerebrospinal fluid. 14,15,16 and 17 Enterobacter cloacae 2009-4/16 Bal sample. Neutropenic patient 17,22 and 23 Enterobacter cloacae 2014-1/14 Tissue. Leg ulcer. 36-42 Enterobacter (Cronobacter) sakazaii 2011-1/3 Ascites fluid. Traffic accident. 16,17,18,19,20 21,27,28,31,37 Escherichia coli 2008-3/12 Ascites fluid 14 Escherichia coli 2009-2/8 Ascites fluid 20 and 21 Escherichia coli 2011-1/3 Ascites fluid. Traffic accident. 16,17,18,19,20 21,24,25,26,31 Escherichia coli 2012-2/6 Pus. Skin eczema 6-9,13-15 Escherichia coli, CPE 2013-2/11 Wound 3-5 Hafnia alvei 2014-1/14 Tissue. Leg ulcer. 36-39,43-45 Klebsiella oxytoca 2012-4/15 Pus from snake bite 13-19 Klebsiella pneumoniae 2010-1/1 Pus. Leg fractura. 3,4,5 and 6 Klebsiella pneumoniae 2010-3/11 Pus. Ovarial abscess 11,12,13,14,15 16,18 and 19 Klebsiella pneumoniae 2011-2/5 Pus from pancreatic drainage 2,3,4,5 Klebsiella pneumoniae ssp rhinoscleromtis 2013-1/2 Maxillary sinus excretion 7-13 Ochrobactrum anthropi 2011-3/11 Pus. Abscess. 16,17,18,19,20 24,25,26,27 Morganella morgnii 2013-4/33 Pus frompelvic abscess 29-34 Proteus mirabilis 2009-1/2 External ear canal effusion 5,6 and 7 Proteus vulgaris 2010-2/8 Pus. Cholecystitis. 18,19,20,22,23 and 26 Proteus vulgaris 2012-4/15 Pus from snake bite 13-17, 20-21 Rahnella aquatilis 2014-4/43 Pus. Wound. Fish farming 13-19,23-25. Salmonella sp 2011-1/3 Ascites fluid. Traffic accident. 16-21,24,29-31 Salmonella sp. (S Enteritidis) 2014-4/44 Pus from gall bladder 29-32,35-37. Serratia fonticola 2008-3/12 Ascites fluid 14 Serratia fonticola 2013-4/32 Leg ulcer 10-19 Serratia rubidaea 2010-2/8 Pus. Cholecystitis. 18,19,20,24,25 and 25
Nonfermentative rods Achromobacter denitrificans 2009-2/6 Skin eruption. Groin. 6,7,9,10 11 and 12 Achromobacter xylosoxidans 2013-3/22 Contact lens infection 8-14 Chryseomonas meningoseptica. Kts. Elizabethkingia meningoseptica Elizabethkingia meningoseptica 2009-3/10 Pus. Maxillary sinusitis. 6,7,8,10,11,12 13 and 23 Pasteurella multocida 2011-1/4 Tissue sample. Dog bite. 33,34,35,36 Pasteurella multocida 2011-4/13 Tissue sample. Animal bite. 2,3,4,5 Pasteurella multocida 2014-1/13 Pus from cheek abscess. Cat bite. 23,24,25,26 Pseudomonas aeruginosa 2008-2/7 Ascites fluid. 8 Pseudomonas aeruginosa 2009-4/13 Sputum. Cystic fibrosis 3 and 4 Pseudomonas aeruginosa 2011-3/9 External ear canal exudate 2,3,4,5 and 6 Pseudomonas aeruginosa 2012-3/10 Pus. Leg ulcer 6-11,13-16 Pseudomonas oryzihabitans 2013-1/2 Pus, Maxillary sinus excretion. 8-10,14-16 Pseudomonas stutzeri 2014-1/12 Pus. Smear sample from skin 10-16, 18-20 Ralstonia pickettii 2010-2/6 Aqua destillata 6,7,8,9 and 10 Sphingobacterium multiforum 2009-3/12 Skin wound. 19,20,21,22 and 23 Stenotrophomonas maltophilia 2008-2/8 Pus. Open leg fractura. 12 Stenotrophomonas maltophilia 2011-3/10 Pus. Leg burn 7-13 Vibrio parahaemolyticus 2014-4/43 Pus. Wound. Fish farming, 13-22 Haemophilus strains Haemophilus influenzae 2009-3/10 Pus. Maxillary sinusitis 9 Haemophilus influenzae 2010-2/5 Pus. Maxillary sinusitis 3 and 4 Haemophilus influenzae 2010-3/10 Middle ear effusion 5,6,7 and 8 Haemophilus influenzae 2012-1/2 Pus. Maxillary sinusitis 6-11 Haemophilus influenzae 2012-2/5 Pus. Maxillary sinusitis 2-5 Haemophilus influenzae 2012-4/13 Middle ear effusion 2-5 Haemophilus influenzae 2013-3/21 Pus. Maxillary sinusitis 3-6 Haemophilus parainfluenzae 2011-1/2 Purulent maxillary sinus excretion 5,6,7,12,13 Haemophilus parainfluenzae 2014-2/42 Pus. Conjunctivitis in a child 7-12 Other Gram-Negative Bacilli and Vibrios Actinobacillus actinomycetemcomitans kts. Aggregatibacter actinom. Aggregatibacter actinomycetemcomitans 2009-2/7 Pus Abscess 14,15,16,17 and 18 Capnocytophaga canimorsus 2013-1/4 Wound. Dog bite. 35-39 Cardiobacterium hominis 2014-3/33 A piece of cardiac valve 19-25 Eikenella corrodens 2013-3/23 Pus from mandibular fistula 18-24 Vibrio vulnificus 2008-3/10 Skin wound. Sushi bar keeper. 6,7 and 8 Anaerobic Gram-Positive Cocci Finegoldia magna 2011-4/16 Pus. Pulmonal empyema. 21,27,28,29,30 31,32,33,34,39 40,41,42 Finegoldia magna 2012-1/4 Pus. Brain abscess 26,31-34,41-44 Peptostreptococcus anaerobius 2009-1/4 Pus. Groin abscess. 17,18,19,22,23 and 24 Peptostreptococcus anaerobius 2012-2/8 Amnionic fluid 29-30,31-37,41-44 Staphylococcus saccharolyticus 2013-2/14 Tissue specimen lumbar vertebra 29-36 Anaerobic Gram-Positive Bacilli Actinomyces israelii 2010-3/11 Pus. Ovarial abscess 11-17, 20-24 Actinomyces mayeri 2014-3/34 Pleural empyema 29-32 Actinomyces naeslundi 2008-1/4 Pus. Brain abscess. 11,12 and 13 Actinomyces odontolyticus 2012-1/4 Pus. Brain abscess 26,34,38-41 Clostridium innocuum 2010-1/4 Pus. Liver abscess. 22,23,24,25,26 and 27
Clostridium innocuum 2013-2/13 Tissue specimen 22-28 Clostridium ramosum 2014-4/44 Pus from gall bladder 38-47. Clostridium septicum 2012-4/15 Pus from snake bite 22-29 Clostridium perfringens 2013-4/33 Pus from pelvic abscess 37-42 Clostridium sporogenes 2009-2/8 Ascites fluid. 21,22,23,25,26 28 and 29 Clostridium sporogenes 2012-3/12 Ascites fluid 28-29,44-46 Clostridium tertium 2012-2/7 Myonecrosis. Tissue specimen 18-28 Eggerthella lenta 2012-2/8 Amnionic fluid 29-30,33-37,45-48 Propionibacter acnes 2009-4/15 Skin smear sample around a cystofix catheter 12,13,14 and 15 Propionibacter acnes 2011-2/8 Pus from infected big toe 18,23,24,25,26 Propionibacter acnes 2013-3/24 Smear sample from nipple 33-36 spearcing Anaerobic Gram-Negative Bacilli Bacteroides fragilis 2008-2/7 Ascites fluid 9 Bacteroides fragilis 2009-1/4 Pus. Groin abscess 17,18,19,20,21 23 and 24 Bacteroides fragilis 2010-2/8 Pus. Cholecystitis. 21,27,28 and 29 Bacteroides fragilis 2014-1/14 Tissue specimen. Leg ulcer. 46-52 Bacteroides ovatus 2012-3/12 Ascites fluid 28-29,35-43 Bacteroides thetaiotamicron 2008-3/12 Ascites fluid 15 and 16 Bacteroides vulgatus 2011-3/11 Pus. Abscess. 16,28,29,30,31 32 Bacteroides vulgatus 2013-1/3 Bile specimen 19-20, 25-34 Fusobacterium necrophorum 2010-4/15 Pus. Frontal sinusitis. 12,13,14,16 18,19,20,21,22 Fusobacterium nucleatum 2011-4/16 Pus. Pulmonal empyema. 21,27,28,29,30 31,32,33,34 35,36,37,38 Fusobacterium nucleatum 2013-4/34 Pus taken by bronchoscopy 44-48,53-55 Fusobacterium russii 2014-1/13 Pus from cheek abscess. Cat bite. 27-34 Prevotella disiens 2009-2/8 Ascites fluid 21,22,24,25,27 28 and 29 Prevotella melanogenica 2008-1/4 Pus. Brain abscess. 11,12 and 13 Prevotella melanogenica 2010-4/15 Pus. Frontal sinusitis. 12,13,14,15,23 24,25,26,27 Prevotella melanogenica 2013-4/34 Pus taken by bronchoscopy. 44-52 Mycobacteria Mycobacterium abscessus 2008-3/11 Tissue sample. Corneal ulcer. 10 and 11 Mycobacterium abscessus 2011-4/15 Tissue sample. Arm ulcer. 13,14,15,16,17 18,19,20 Yeasts and Molds Candida albicans 2008-1/2 Skin smear. Eczema. DM. 5,6,7 Candida albicans 2008-2/7 Ascites fluid 10 Candida albicans 2010-1/2 Pus Axillary eczema 8,9,10,13 and 14 Candida albicans 2012-2/6 Pus. Skin eczema 6-10,16-17 Candida glabrata 2009-4/16 Bal sample. Neutropenic patient 17,18,24 and 25 Candida glabrata 2013-4/32 Leg ulcer 10-14,24-26 Aspergillus fumigatus 2009-1/2 External ear canal effusion 5 and 8 Information Yvonne Björkman +358 9 8566 8222 yvonne.bjorkman@labquality.fi
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