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HER2 TESTING DIAGNOSTIC ACCURACY Can t We Finally Get It Right? Allen M. Gown, M.D. Medical Director and Chief Pathologist PhenoPath Laboratories Seattle, Washington Clinical Professor of Pathology University of British Columbia, Vancouver BC The USCAP requires that anyone in a position to influence or control the content of CME disclose any relevant financial relationship WITH COMMERCIAL INTERESTS which they or their spouse/partner have, or have had, within the past 12 months, which relates to the content of this educational activity and creates a conflict of interest. Dr. Allen M. Gown declares he/she has no conflict(s) of interest to disclose. Welcome! 1

HER2 Network and Anti HER2 Therapy Key Randomized Adjuvant Trastuzumab Trials Study N DFS HR OS HR B 31/N983 1 3,551 0.60 (p < 0.0001) 0.63 (p < 0.0001) HERA 5,102 0.76 (p < 0.0001) 0.76 (p < 0.0005) BCIRG 3,222 0.64 (p < 0.0001) 0.63 (p < 0.001) Accurate and standardized testing algorithms, which adequately measure HER2 expression in newly diagnosed patients with breast cancer, are crucial for determining which patients may benefit from HER2 targeted therapy. HER2 Overexpression in Breast Cancer Normal ~20 50,000 receptors HER2 Overexpressed Up to ~2,000,000 receptors Genentech 2010 2

HER2 Gene Amplification and Protein Overexpression J Clin Oncol 31:3997 4014, 2013 HER2 gene HER2 mrna HER2 protein Normal Breast Epithelial Cell Breast Cancer Cell (with HER2 alterations) FACTORS AFFECTING DIAGNOSTIC ACCURACY PRE ANALYTICAL Specimen type, ischemia time, fixative content and duration, processing, etc. ANALYTICAL Use of nonvalidated assay, choice of antibody, epitope retrieval, detection system, etc. POST ANALYTICAL Scoring system, dichotomization cutoff, etc. ASCO-CAP GUIDELINES FOR ER AND HER2 TESTING (2010 AND 2013) PRE ANALYTICAL Cold ischemia time (recommendation): LESS THAN ONE HOUR Type of specimen (recommendation): CORE or RESECTION* Nature and duration of fixation: 10% NBF for 6 72 HOURS* *HER2 represents a change from 2007 Guidelines 3

How Are We Doing? Has Control of Pre Analytic Factors Significantly Improved Diagnostic Accuracy? N = 711 primary breast cancers analyzed by IHC and ISH Using FISH as gold standard, false negative IHC rate was 0.84% (6/711) N = 1,212 TMA based cases analyzed by IHC and ISH Using FISH as a gold standard, false negative IHC rate was 1.6% (16/978) Br Cancer Res Treat 143:485 92, 2014 HER2 IHC Inaccuracy 2014 (False Positives) Phase III Adjuvant Lapatinib and/or Trastuzumab Treatment Optimisation trial for HER2 positive breast cancer Local HER2 Positive Mayo Discordant 24/412 (5.8%) UEO Discordant* *IHC plus FISH 1166/8037 (14.5%) ER and HER2 reviewed at Mayo for North America and European Institute of Oncology for rest of world (except China) Br Cancer Res Treat 143:485 92, 2014 4

How Accurate and Reproducible is HER2 Assessment (2015)? Tuscany, Italy Unstained sections on 35 breast cancer cases sent to each of 12 laboratories in Tuscany Cases known to be FISH+ (19) or FISH (16) No false positive IHCs (3+ but FISH negative) False negative IHC rate 24.6% (0 or 1+ but FISH positive) IHC FISH Concordance PhenoPath Laboratories 2008 2012 Nonamplified Negative (0, 1+) Positive (3+) 3903 (98.6%) Amplified 57 N = 9,022 cases analyzed 13 450 (97.2%) TOTALS 3960 463 Cancer Res 72(24 Suppl):P1 07 01, 2012 Arch Pathol Lab Med 138:876 84, 2014 Sent out 1150 surveys, 85% returned 95% negative concordance between IHC and FISH achieved by 76.5% of laboratories 95% positive concordance between IHC and FISH achieved by 70.4% 5

Arch Pathol Lab Med 138:876 84, 2014 2013 ASCO-CAP HER2 TESTING GUIDELINES Comparison of 2007 v. 2013 Concordance Requirements 2007 Guidelines 2013 Guidelines 95% negative concordance between IHC and another IHC assay achieved by 71.1% of laboratories 95% positive concordance between IHC and another IHC assay achieved by 69.6% At least 95% concordance (for both positives and negatives) compared with a validated assay to which it is compared 25 100 cases required for validation Laboratories are responsible for ensuring the reliability and accuracy of their testing results, by compliance with accreditation and proficiency testing requirements for HER2 testing assays. Specific concordance requirements are not required 20 positive and 20 negative cases (FDA approved assay); 40 positive and 40 negative cases (LDT) FACTORS AFFECTING DIAGNOSTIC ACCURACY PRE ANALYTICAL Specimen type, ischemia time, fixative content and duration, processing, etc. ANALYTICAL Use of nonvalidated assay, choice of antibody, epitope retrieval, detection system, etc. POST ANALYTICAL Scoring system, dichotomization cutoff, etc. Factors Affecting HER2 Test Accuracy by IHC Different primary antibodies, kits Sub optimized epitope retrieval methods Inaccuracies inherent in binning Technical artifacts on slides (edge, crush) Suboptimal positive controls Tendency to up score to avoid missing a positive case 6

HER2 Molecule and Epitopes Extracellular { Trastuzumab SP3 Rabbit Moab 4B5 Rabbit Moab NordiQC Data 2015 Transmembrane Intracellular{ CB11 Mouse Moab A0485 Rabbit polyclonal (HercepTest) Lapatinib NordiQC Data 2015 2 Optimal Protocol Settings Factors Affecting HER2 Test Accuracy by IHC Different primary antibodies, kits Sub optimized epitope retrieval methods Inaccuracies inherent in binning Technical artifacts on slides (edge, crush) Suboptimal positive controls Tendency to up score to avoid missing a positive case 7

The Phenomenon of Binning Continuous Variable 4 Bins for HER2 IHC Negative Equivocal Positive 1 2 3 4 0 1+ 2+ 3+ 2013 ASCO-CAP HER2 TESTING GUIDELINES Comparison of 2007 v. 2013 IHC Definitions IHC 3+ 2007 Guidelines 2013 Guidelines 3+ IHC >30% strong membranous signal > 10% strong membranous signal 2+ IHC Complete membranous signal either nonuniform or weak but circumferential in 10% of cells OR strong membranous signal <30% Circumferential membranous signal incomplete and/or weak/moderate AND within >10% tumor cells OR strong membranous in 10% of cells 1+ IHC Weak, incomplete membranous signal in any proportion of cells OR weak complete in <10% Incomplete membranous signal faint/barely perceptible within >10% cells 0 IHC No signal No signal OR incomplete membranous signal faint/barely perceptible within 10% cells 2007 or 2013 8

2015 Modification of 2013 IHC Definitions Concern expressed by many pathologists about 2013 definition of 2+: circumferential membrane staining that is incomplete and/or weak/moderate in >10% of tumor cells 2+ now defined in 2015 as a weak to moderate complete membranous staining observed in > 10% of tumor cells IHC 2+ 2007 or 2013 3+ Positive 2+ Equivocal 9

\ 2+ Equivocal 1+ Negative Barely perceptible 1+ \ 1+ or 2+? 10

IHC1+ or 2+?? IHC 2+ or 3+?? The Phenomenon of Binning A and B Same Shade of Gray? Continuous Variable 1 2 3 4 11

A and B Same Shade of Gray? Which part do you score? Case 1442 12

HER2 HER2 HER2 13

HER2 HER2 Case 1442 Scored as 1+ by one pathologist, 2+ by another HER2:CEP17 ratio of 1.3 (not amplified) Case 1442 Appears heterogeneous, but this is largely related to partially crushed tissue In areas where tumor is uncrushed, signal is 1+ In areas where tumor crushed, signal is 2+ 3+ Always score uncrushed tumor 14

Factors Affecting HER2 Test Accuracy by IHC Different primary antibodies, kits Sub optimized epitope retrieval methods Inaccuracies inherent in binning Technical artifacts on slides (edge, crush) Suboptimal positive controls Tendency to up score to avoid missing a positive case Suboptimal HER2 IHC Controls: Is This Your Positive Control? Optimal HER2 IHC Controls Don t Use High Positives as Sole Positive Control 0 2+ HER2 is not scored as a binary With lower assay sensitivity, you may miss lower level positivity (i.e., 2+ might be scored as 1+) 1+ 3+ Best to use range of defined HER2 positivity Ideally corresponding to the HER2 bins 15

Factors Affecting HER2 Test Accuracy by IHC Different primary antibodies, kits Sub optimized epitope retrieval methods Inaccuracies inherent in binning Technical artifacts on slides (edge, crush) Suboptimal positive controls Tendency to up score to avoid missing a positive case So Why Don t We Just Use In Situ Hybridization Instead of IHC? (F)ISH Also Has Accuracy Problems Assessment Run H7 2015 HER2 ISH (CISH or FISH) 2 Optimal Protocol Settings Potential Sources of Error In Situ Hybridization Weak signal leading to undercounting Sampling error and bias in selecting cells ( cherry picking ) Counting of overlapping cells Misidentification of invasive v. in situ carcinoma Reliance on CEP17 as reference gene 16

Case 3348 Case 3348 Case 3348 Case 3348 1+ by immunohistochemistry Metasystems count (390 tiles) HER2 = 5.7 CEP17 = 4.1 HER2:CEP17 = 1.4 (Not amplified, score equivocal) Manual count (60 cells) HER2 = 3.92 CEP17 = 2.17 HER2:CEP17 = 1.8 (Not amplified*) *Scattered positive cells, less than 5% of population 17

Probability Sampling Sampling error results from collecting data from some rather than all members of a population and is highly dependent on the size of the sample Pew Research Center Potential Sources of Error In Situ Hybridization Weak signal leading to undercounting Sampling error and bias in selecting cells ( cherry picking ) Counting of overlapping cells Misidentification of invasive v. in situ carcinoma Reliance on CEP17 as reference gene Signal Truncation Potential Sources of Error In Situ Hybridization Weak signal leading to undercounting Sampling error and bias in selecting cells ( cherry picking ) Counting of overlapping cells Misidentification of invasive v. in situ carcinoma Reliance on CEP17 as reference gene 18

SPREAD OF THE AMPLICONS ON CHROMOSOME 17 Different Results with Different Reference Genes Change in HER2 Gene Status With Use of Alternative Chromosome 17 Reference Genes Other Evidence That Polysomy Is Rare in Breast Cancer Mod Pathol 22:1169-75, 2009 N = 97 19

Pseudoamplification Owing to Loss of CEP17 HER2 CEP17 Case 16538 Metasystems Results 3.70 mean signals per nucleus 1.60 mean signals per nucleus HER2 / CEP17 2.2 Result (2013 Guidelines): POSITIVE Case 16538 Pseudoamplification Owing to Loss of CEP17 N = 6274 cases with IHC and FISH from 2014 40/6274 (0.64%) were IHC negative but FISHpositive (discordant) Of the 40 cases, 15 (37.5%) are FISH positive only because their CEP17 ratio was below 1.8, not because of elevated HER2 signals Fulton R and Gown AM, 2015 (unpublished data) ISH v. IHC From 2007 ASCO CAP Guidelines...There is no gold standard at present; no assay currently available is perfectly accurate to identify all patients expected to benefit or not from anti HER2 therapy. 20

Both FISH and IHC are Imperfect Tests Both are complex tests requiring highly skilled pathologists and technologists Both IHC and FISH can demonstrate high accuracy Both IHC and FISH have demonstrated considerable real world false negative/positive rates, despite control of preanalytical factors Both FISH and IHC are Imperfect Tests This can result in discordant results on the same case when tested both by FISH and IHC This can result in discordant results on the same case when tested by two different laboratories HER2 Assessment in the Future: RT PCR? HER2 by PCR? 21

Very High Concordance Oncotype (RT PCR) v. FISH FISH Positive FISH Negative RT PCR Positive RT PCR Negative 55 (98%) 11 (3%) 1 (2%) 408 (97%) N = 568 Baehner FL et al., J Clin Oncol 28:4300 6, 2010 Baehner FL et al., J Clin Oncol 28:4300 6, 2010 Breast Cancer Res 17:133, 2015 RT PCR vs. IHC N9831 adjuvant transtuzumab for HER2+ tumors (N = 901 with consent and sufficient tissue) Does quantitative mrna expression predict benefit from trastuzumab? Perez E et al., Breast Cancer Res 17:133, 2015 22

RT PCR vs. FISH RT PCR Measure of mrna as Alternative to HER2 FISH or IHC? Using Central IHC as reference, RT PCR positive concordance = 87.8%, negative concordance = 86.6% Using Central FISH as reference, RT PCR positive concordance = 83.8%, negative concordance = 89.8% Perez E et al., Breast Cancer Res 17:133, 2015 Perez E et al., Breast Cancer Res 17:133, 2015 Perez E et al., Breast Cancer Res 17:133, 2015 We do not recommend HER2 testing by RT PCR replacing IHC or FISH assays in standard practice. How Can We Ensure Accurate HER2 Results? Adherence to ASCO CAP Guidelines Experience Proficiency testing Keep pathologists directly involved in evaluation of FISH and IHC Use of image analysis Pathologists should be aware of performance of their testing facility (e.g., concordance rate or other measurement of accuracy and reproducibility) 23

Thank you for your attention 24