Use of degradable cationic surfactants with cleavable linkages for enhancing the. chemiluminescence of acridinium ester labels. Supplementary Material

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Use of degradable cationic surfactants with cleavable linkages for enhancing the chemiluminescence of acridinium ester labels Supplementary Material Anand atrajan*and David Wen Siemens Healthcare Diagnostics Advanced Technology and Pre-Development 333 Coney Street East Walpole, MA 02032 * Author to whom correspondence should be directed. E-mail: anand.natrajan@siemens.com Phone: 1-508-660-4582 Fax: 1-508-660-4591

Table of Contents 1. Synthetic schemes for surfactants 1 and 2 (Figures S1 and S2). 2. Experimental procedures for the synthesis of surfactants 1 and 2.

C 15 H 31 i H H 2 Toluene Reflux, 20 h C 15 H 31 MeI C H 15 H 31 H ii 98% 94% iii + I- IR-900 Cl C 15 H 31 H + Cl- 1 74% Figure S1. Synthetic scheme for cationic surfactant 1 with cleavable amide linkage.

(Ph) 2 C 1) Et 3 C 12 H 25 iv H 80 o C, 8 h 2) H 80 o C, 8 h C 12 H 25 v MeI C 12 H 25 vi 91% I - + IR-900 Cl C 12 H 25 2 53% + Cl- Figure S2. Synthetic scheme for cationic surfactant 2 with cleavable carbonate linkage.

Synthesis of cationic amide surfactant 1 (Figure S1) Compound ii Palmitic acid (i, 2.564 g, 10.00 mmoles), toluene (100 ml) and,dimethylethylenediamine (1.147 ml, 10.50 mmoles) were combined and refluxed for 20 hours. The reaction mixture was concentrated to dryness which gave 3.21 g of a slightly yellow solid. The crude solid was re-crystallized from dry acetone (75 ml). The desired product ii (1.83g) was obtained as white, needle-like crystals. 1 H-MR (500 MHz, CDCl 3 ), 0.87 (t, 3H, J = 6.5), 1.20-1.35 (m, 24H), 1.55-1.70 (m, 2H), 2.17 (t, 2H, J = 7.5), 2.30 (s, 6H), 2.49 (t, 2H, J = 5.5), 3.36 (dt, 2H, J = 5.5, 5.5), 6.25 (br s, 1H). MALDI-TF MS m/z 327.4 (M +H + ); HRMS m/z 327.3376 (M +H + ) (327.3375 calculated). Compound iii Compound ii (1.41 g, 4.32 mmoles), acetone (50 ml) and iodomethane (0.309 ml, 4.97 mmoles) were refluxed at 80 o C under an argon atmosphere for 6 hours. The reaction mixture was cooled to room temperature and the precipitated white solid was collected by filtration. The filter cake was washed with dry acetone (10 ml x 4) and dried over P 2 5 under high vacuum. The desired product iii (1.904 g) was obtained as a white solid. 1 H-MR (500 MHz, CDCl 3 ) 0.88 (t, 3H, J = 6.5), 1.21-1.38 (m, 22H), 1.57-1.70 (m, 4H), 2.29 (t, 2H, J = 7.3), 3.42 (s, 9H), 3.78-3.89 (m, 4H), 7.96 (br s, 1H). MALDI-TF MS m/z 282.36 (M-Me + 3 ); HRMS m/z 341.3528 (M + ) (341.3532 calculated). Compound 1 Compound iii (1.50 g, 3.20 mmoles) was dissolved in absolute ethanol (400 ml) at room temperature and IR-900 chloride resin (76.2 g, 3.20 mmoles) was added and stirred at room temperature for 1 hour. Then, the mixture was passed through an IR-900 chloride resin column (80 g pre-washed with absolute ethanol). The column was eluted with absolute ethanol (600 ml). The eluent was concentrated under reduced pressure which gave1.51 g of a slightly brown solid. This material was re-crystallized from

anhydrous acetone/ethanol. The desired product, surfactant 1 (0.895 g), was obtained as a white solid. 1 H-MR (500 MHz, CDCl 3 ) 0.86 (t, 3H, J = 6.3), 1.17-1.38 (m, 22H), 1.55-1.68 (m, 4H), 2.27 (t, 2H, J = 7.3), 3.43 (s, 9H), 3.70-3.85 (m, 4H), 8.72 (br s, 1H). MALDI-TF MS m/z 282.36 (M-Me + 3 ); HRMS m/z 341.3529 (M + ) (341.3532 calculated). Synthesis of cationic carbonate surfactant 2 (Figure S2) Compound v A mixture of dodecanol (iv, 2.236 ml, 10.00 mmoles), triethylamine (1.394 ml, 10.00 mmoles) and diphenyl carbonate (2.142 g, 10.00 mmoles) was heated to 80 o C for 16 hours. Then, 3-dimethylamino-1-propanol (2.366 ml, 20.00 mmoles) was added and heated to 80 o C for an additional 16 hours. The reaction mixture was then concentrated under reduced pressure to give 3.92 g of a dark yellow oil. It was purified by silica gel column chromatography using methanol/ethyl acetate (1:9) as eluent. The desired product v (2.63 g) was obtained as a yellow oil. 1 H-MR (500 MHz, CDCl 3 ) 0.88 (t, 3H, J = 6.5), 1.20-1.42 (m, 18H), 1.61-1.71 (m, 2H), 1.87-1.98 (m, 2H), 2.33 (s, 6H), 2.49 (br t, 2 H, J = 7.0), 4.12 (t, 2H, J = 6.5), 4.19 (t, 2H, J = 6.3). MALDI-TF MS m/z 316.3 (M+H + ); HRMS m/z 316.2855 (M+H + ) (316.2852 calculated). Compound vi Compound v (1.500 g, 4.75 mmoles), acetone (50 ml) and iodomethane (0.340 ml, 5.47 mmoles) were combined and refluxed for 6 hours. After cooling to room temperature, the desired product precipitated out as a white solid. It was collected by filtration and washed with ethyl acetate (10 ml x 4). The solid was dried over P 2 5 under high vacuum. The desired product vi (1.988 g) was obtained as a white solid. 1 H-MR (500 MHz, CDCl 3 ) 0.87 (t, 3H, J = 7.0), 1.60-1.72 (m, 18H), 2.05-2.34 (m, 2H), 3.49 (s, 9H), 3.76 (t, 2H, J = 7.3), 4.12 (t, 2H, J = 6.5), 4.29 (m, 2H). MALDI-TF MS m/z 316.3 (M+H + ); HRMS m/z 316.2855 (M+H + ) (316.2852 calculated).

Compound 2 Compound vi (1.50 g, 3.28 mmoles) was dissolved in absolute ethanol (200 ml) at room temperature and IR-900 chloride resin (78 g, 328 mmoles) was added and stirred at room temperature for 1 hour. Then, the mixture was passed through an IR-900 chloride resin column (80 g pre-washed with absolute ethanol). The column was eluted with absolute ethanol (400 ml). The eluent was concentrated under reduced pressure which gave 1.5 g of a white solid. The crude product was re-crystallized from anhydrous acetone. The desired product 2 (0.637 g) was obtained as a white solid. 1 H-MR (500 MHz, CDCl 3 ) 0.86 (t, 3H, J = 6.5) 1.60-1.70 (m, 18H), 2.18-2.30 (m, 2H), 3.49 (s, 9H), 3.72 (t, 2H, J = 7.8), 4.11 (t, 2H, J = 6.8), 4.25 (m, 2H). HRMS m/z 330.3013 (M + ) (330.3008 calculated).