Nitai D Mukhopadhyay Home Address Work Address 4909 Belair Place Theater Row, Rm 3028 Glen Allen VA 23059 730 East Broad St Department of Biostatistics, MCV Phone: (804) 308-3026 Richmond VA 23298 Cell: (804) 467-4756 Phone : (804) 827-2053 Degrees May 1993 May 1995 December 2000 B. Stat Statistics, Indian Statistical Institute, India. M.Stat Statistics, Indian Statistical Institute, India. Ph.D., Statistics, Purdue University. Experience 1995-2000 Teaching Assistant, Department of Statistics, Purdue University. 1999-2000 Design and Software Consultant for Statistics Consulting Services Department of Statistics, Purdue University. 2000-2002 Senior Statistician, Neuroscience Statistics Division, Eli Lilly and Co. 2002-2004 Research Scientist, Pharmacogenetics, Eli Lilly and Co. 2004-2007 Senior Research Scientist, Discovery Statistics, Eli Lilly and Co. 2007-present Assistant Professor, Department of Biostatistics, Virginia Commonwealth University. External Training May 2002 Apr 2004 Summer Institute in Statistical Genetics, UNC, Raleigh, NC. Workshop : Genetic Analysis of Complex Human Diseases, Center for Human Genetics, Duke University Medical Center. Professional Societies Institute of Mathematical Statistics. American Statistical Association. Honors and Awards 1988 National Scholarship, Government of India 1998 Purdue Research Foundation Scholarship. 2000 Radical Thinking Award, Eli Lilly and Co. 2003 Wiley Best Poster Award, Aussois, France. Teaching Fall 1995 Purdue University, Department of Mathematics Teaching Assistant, Multivariate Calculus
1996-1999 Purdue University, Department of Statistics Statistical Methodology for Technology students Probability for Management students Statistical Methods. Fall 2007 Biostatistics Computation, STAT 524. Spring 2008 Applied Bayesian Methods STAT591 Professional Activities Referee for Bioinformatics Referee for Journal of American Statistical Association. Referee for Health Care Management Science. Referee for Annals of Statistics Referee for Computational Statistics and Data Analysis Publications 1. Sowell M., Mukhopadhyay ND, Cavazzoni P., Shankar S., Steinberg H., Breier A., Beasley C. and Dananberg J. Hyperglycemic Clamp Assessment of Insulin Secretory Responses in Normal Subjects Treated with Olanzapine, Risperidone, or Placebo, Journal of Clinical Endocrinology and Metabolism, 87(6):2918-2923, Jun 2002. 2. Berger JO, Ghosh JK and Mukhopadhyay ND Approximation to the Bayes Factor in Model Selection Problems and Consistency Issues, Journal of Statistical Planning and Inference, 112 /1-2, 241-258, Jan 2003. 3. Mukhopadhyay ND and Ghosh JK Parametric Empirical Bayes Model Selection- Some Theory, Methods and Simulation IMS lecture notes- Monograph series, Vol 41, Probability, Statistics and their Applications: Papers in Honor of Rabi Bhattacharya. 229-245, July 2003. 4. Sowell M., Mukhopadhyay ND, Cavazzoni P., Carlson C., Mudaliar S., Chinnapongse S., Ray A., Davis T., Breier A., Henry R. and Dananberg J. Evaluation of Insulin Sensitivity in Healthy Volunteers Treated with Olanzapine, Risperidone, or placebo: a prospective, randomized study using the two step hyperinsulinemic, euglycemic clamp, Journal of Clinical Endocrinology and Metabolism 88(12):5875-5880, December 2003. 5. Pankratz, N., Mukhopadhyay ND, Huang, S., Foroud, T. and Kirkwood S. Identification of Genes for Complex Disease Using Longitudinal Phenotypes. BioMed Central Genetics 4(Suppl 1):S58, December 2003. 6. Cavazzoni, P. Mukhopadhyay ND Carlson C. Breier A. and Buse, J. Retrospective Analysis of Risk Factors in Patients with Treatment-Emergent Diabetes during clinical trials of Antipsychotic Medications, British Journal of Psychiatry Suppl.47:S94-S101, April 2004.
7. Zhang EY, Fu DJ, Pak YA, Stewart T, Mukhopadhyay, ND, Wrighton SA and Hillgren KM Genetic Polymorphisms in Human Proton-Dependent Dipeptide Transporter PEPT1: Implications for the Functional Role of Pro586 Journal of Pharmacology and Experimental Therapeutics August 2004 ; 310(2):437-45. 8. Mukhopadhyay, ND Ghosh, JK and Berger, JO Some Bayesian Predictive Approaches to Model Selection, Statistics and Probability Letters 73(4)369-379 July 2005. 9. Mukhopadhyay, ND and Chatterjee, SB Causality and Pathway Search in Microarray Time Series Experiment'' Bioinformatics February 2007, 23(4), 442-449. 10. Falk CT, Finch S, Kim W., Mukhopadhyay ND, "Data Mining of RNA Expression and DNA Genotype Data: Presentation Group 5 Contributions to Genetic Analysis Workshop 15" Genetic Epidemiology, 31 (Supplement 1): S43- S50, 2007. 11. Chatterjee, S and Mukhopadhyay, ND "Risk and resampling under model uncertainty " IMS Collections Pushing the Limits of Contemporary Statistics: Contributions in Honor of Jayanta K. Ghosh Vol 3, 155-169, 2008. 12. Yoo, B.K., Emdad L., Su, Z, Villanueva, A, Chiang D.Y., Mukhopadhyay, N.D., Mills A.S., Waxman S., Fisher R.A., Llovet, J.M., Fisher P.B., Sarkar, D. Astrocyte elevated gene-1 regulates hepatocellular carcinoma development and progression J. Clin. Invest. 119 : 465-477(2009). Letters to the Editor 1. Mukhopadhyay, ND and Chatterjee S Reply to Comment on causality and pathway search in microarray time series experiment Bioinformatics 24(7) 2008. Poster and Presentations Approximations to the Bayes Factor in Model Selection problems and consistency issues. Poster at University of Nebraska at Lincoln, Symposium on Model Selection, Empirical Bayes And Related Topics, Lincoln, Nebraska, USA, March 1999. Comparison of Default Priors for Model Selection in the Linear Model Poster at Sixth Purdue International Symposium on Statistics Workshop on Interfaces Between Major Statistical Paradigms Purdue University, USA, June 1998.
Comparison of Default Priors for Model Selection in the Linear Model. Poster at Sixth Valencia International Meeting on Bayesian Statistics, Universitat De Valencia, Spain, May 1998. Bayes and Empirical Bayes Rules for Model Selection with Prediction Loss and its Relationship with AIC. Invited presentation at AMS-IMS-SIAM, Joint Summer Research Conference : Bayes, Frequestist and Likelihood Inference : A synthesis. South Hadley, MA, USA, July 2000. Random Blood Glucose Levels in Patients with Schizophrenia Treated with Typical and Atypical Antipsychotic Agents : An Analysis of Data from Double-blind, Randomized, Controlled Clinical Trials. Poster at International Congress for Schizophrenia Research, Whistler Canada, April 2001. Risk Factors for Treatment Emergent Glucose Abnormalities in Patients with Schizophrenia. Poster at American Diabetes Association, San Francisco, CA, June 2002. Assessment of Insulin Secretory Responses Using the Hyperglycemic Clamp in Normal Subjects Treated with Olanzapine, Risperidone or Placebo. Poster at American Diabetes Association, San Francisco, CA, June 2002. Identification of Genes for Complex Disease Using Longitudinal Phenotypes. Poster at Genetic Analysis Workshop 13, New Orleans LA, Nov 2002. Bayes and Empirical Bayes Rules for Model Selection with Prediction Loss and its Relationship with AIC. Presentation at International Bayesian Workshop / Conference Indian Statistical Institute Kolkata, India, Jan 2003. Bayesian Model Selection for High Dimensional Models with Precdiction Error loss and 0-1 loss. Poster at Fourth International Workshop on Objective Prior Methodology, Aussois, France, June 2003. Genome-wide scans for Association : Issues and Methods invited presentation at Global Statistics Conference, Eli Lilly and Co., Indianapolis IN September 2004. Association Analysis for Sets of Correlated Markers. Poster at International Genetic Epidemiology Society meeting, Park City, Utah, Oct 2005. Association Analysis of Gene Expression Clusters with SNP markers. Presentation and Poster at Genetic Analysis Workshop, Tampa, Florida, Nov 2006. Causality and Pathway Search in Microarray Time Series Experiment. Presentation at IISA Joint Statistical Meeting and International Conference on Statistics, Probability and Related Areas, Cochin, India, Jan 2007.
Semi Parametric Modeling and Inference of Gene Dependence Using Copulas Invited presentation at IISA Frontiers of Probability and Statistical Science University of Connecticut Storrs, May 2008. "Testing and Credible Set Construction in High Dimension Using Multivariate Quantiles." Contributed presentation at Joint Statistical Meeting, Washington DC, Aug 2009. "Efficient Sampling of Inverse Correlation Matrices and its Applications in Bayesian Modeling of Gene Interaction in Early Phase Genomic Experiments" Invited presentation at Sixteenth Annual Biopharmaceutical Applied Statistics Symposium, Savannah, GA Nov 2009.