Vicente Soriano Department of Infectious Diseases

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Predictors of Response to Hepatitis C Therapy Vicente Soriano Department of Infectious Diseases Hospital Carlos III, Madrid, Spain

Diagnosis Therapy IL28B alleles Non-invasive liver fibrosis methods Viral load HCV geno/subtyping Drug resistance Protease inhibitors Polymerase inhibitors NS5A inhibitors Interferon lambda Alisporivir

New & Old Predictors of HCV treatment response Old Genotype Viral load Fibrosis RVR Adherence Anemia New IL28B Polymorphisms HCV-1 subtypes

IL28B polymorphisms & hepatitis C outcome IL28B gene SNP: rs12979860 (CC, CT, TT) Interferon λ3 Response to pegifn+rbv Spontaneous HCV clearance Chromosome 19 Ge et al. Nature 2009; 461: 399-401. Suppiah et al. Nature Gen 2009; 41: 1100-4. Tanaka et al. Nature Gen 2009; 41: 1105-9. Thomas et al. Nature 2009; 461: 798-802.

IL28B polymorphisms, ethnicity & SVR

SVR p<0.0001 AIDS 2010 p=0.684 86% 81% 75% p=0.001 65% p=0.087 67% 38% 30% 25% CC CT/TT CC CT/TT CC CT/TT CC CT/TT 75 89 34 61 35 16 6 12 All HCV-1 HCV-3 HCV-4 164 95 51 18

IL28B polymorphisms in HIV-HCV coinfection HCV-RNA <600,000 IU/ml 11.9 p<0.001 HCV genotype 3 8.0 p<0.001 IL28B CC genotype Liver fibrosis stage F0-F2 3.7 3.5 p=0.002002 p=0.009 0 5 10 15 20 25 30 35 40 Odds ratio (95% confidence interval) Rallon et al. AIDS 2010

Prometheus index HCV genotype Fibrosis stage (KPa) Serum HCV-RNA IL28B SNPs http://www.fundacionies/prometheusindex.php

Recommended by EACS 2011 http://www.fundacionies/prometheusindex.php php

Baseline Prediction of Response to PegIFN+RBV in Chronic Hepatitits C Using the PROMETHEUS Index: Coinfected vs Monoinfected Patients To examine the accuracy of the PROMETHEUS index in HCVmonoinfected patients in comparison with HIV-HCV coinfected patients. HIV/HCV n=245 HCV n=177 The accuracy of the Prometheus Index to predict SVR is significantly lower in HCV-monoinfected than in HIV-HCV coinfected patients. Updating the Prometheus Index with HIV status should improve the accuracy to predict SVR in HCV-monoinfected patients. Medrano et al. CROI 2012; abstract 761.

FibroScan Metavir KPa F0-F1 <7.5 F2 7594 7.5-9.4 F3 9.5-14.4 F4 >14.5 No fasting Examination duration < 10 min 10 successful acquisitions Median M value = correct value Results expressed in kpa Less reliable with obesity & LEE

Why we need liver fibrosis assessment and which distinctions are relevant? No fibrosis Do nothing, wait Significant fibrosis Consider treatment interventions Advanced Screen for esophag varices or cirrhosis Screen for HCC Avoid/adjust meds dosing

HCV antivirals in most advanced development Protease Polymerase inhibitors NS5A inhibitors inhibitors Telaprevir Boceprevir Simeprevir Danoprevir/r Asunaprevir BI-1335 ABT-450/r GS-9256 Nucleos(t)ide analogues Mericitabine GS-7977 IDX-184 Non-nucleoside analogues GS-9190 Filibuvir i BI-7127 ANA-598 VX-222 ABT-333 Daclatasvir

Main differential features of new DAA against HCV NS3 protease inhibitors NS5B polymerase nucleos(t)ide analogs NS5B polymerase non-nucleoside analogues NS5A inhibitors Mechanism of inhibition Inhibitory competition Inhibitory competition Allosteric? Genotype activity G1 (G1b > G1a) Across all G1 (G1b >1a) Across all (G1a<G1b) Resistance Low High Low Low barrier Cross- High Low Split out in 4-5 high resistance families Drug PK pharmacodynamic PK PK interactions

Main Drug Resistance Mutations to DAA Poveda et al, Future Virology 2012

Natural polymorphisms influencing DAA susceptibility Drug family NS3 protease inhibitors (no. NS3 sequences: 1612 ) NS5B non- nucleoside analogues (no. NS5B sequences: 1025 ) Key mutations associated with DAA resistance* 1a 1b 2 3 4 DAA affected by specific polymorphisms T54A/S 1.4% S 0 0 0 5.5% S Telaprevir, boceprevir V55A 1.2% A 0 0 0 0 Boceprevir Q80K 39.7% K 0 0 0 0 Simeprevir D168A/H/T/V/Q 0 0 0 99.2% Q 0 Simeprevir C316Y/N 0 36% N 0 0 0 ABT-333 (NNI-4) ABT-072 (NNI-4) M414T/L 0 0 0 0 34.2%L Setrobuvir (NNI-3) L419M/V 0 0 2.7% V 0 0 VCH-759 (NNI-2) M423T/I/V 1.8 I 0 0 0 0 Filibuvir (NNI-2) VCH-759 (NNI-2) VHC-916 (NNI-2) I482L/V/T 0 0 100% L 100% L 100% L VCH-759 (NNI-2) V494I/A 0 0 100% A 5.2%A 0 VCH-759 (NNI-2) V499A** 96.2% A 10.5%A 91% A 100%A 100%A Tegobuvir (NNI-1) BI-7127 (NNI-1) NS5A inhibitors (no. NS5a sequences: 3153 ) Q30H/R 0 0 0 0 51.3% R Daclatasvir L31M/V/F 0 0 83.5 % 0 92% M Daclatasvir M Y93C/H/N 0 2% H 0 0 5.4%H Daclatasvir Poveda et al, ICVH NYC 2012

Natural polymorphisms at the NS3 protease Drug family NS3 protease inhibitors (no. NS3 sequences: 1612 ) Key mutations associated with DAA resistance* 1a 1b 2 3 4 DAA affected by specific polymorphisms T54A/S 1.4% S 0 0 0 5.5% S Telaprevir, boceprevir V55A 1.2% A 0 0 0 0 Boceprevir Q80K 39.7% K 0 0 0 0 Simeprevir D168A/H/T/V/Q 0 0 0 99.2% Q 0 Simeprevir Antivir Ther. 2011;16:413-6.

HCV isolates containing Q80K displayed significantly reduced d susceptibility to TMC-435 (simeprevir) i Bae et al, Antimicrob Agents Chemother 2010

ASPIRE trial (TMC435+pegIFN/RBV, IFN-experienced) SVR to TMC435 based on HCV subtype (G1a vs. G1b) and presence or absence of Q80K polymorphism. G1a GT1a with Q80K G1a no Q80K G1b TMC100mg + P/R 45/81 (55.6) 5/23 (21.7) 40/57 (70.2) 83/113 (73.5) N=197 TMC150mg + P/R 53/84 (63.1) 14/23 (60.9) 39/59 (66.1) 90/112 (80.4) N=199 Placebo + P/R 5/27 (18.5) 1/5 (20) 4/22 (18.2) 10/39 (25.6) N=66 Lenz et al, EASL Barcelona 2012

Therapeutic Strategy HIV Suppressive HCV Eradicative RNA RT Provirus Nucleus Integration Pro Pol RNA Cytosol Pro CD4+ T-lymphocyte Hepatocyte

Implications of widespread use of DAA Significant increments in cost and demands for the health system, including well-trained personnel. Shift in HCV genotypes within the infected population, being other genos replacing geno 1. Changes in HCV-infected populations, with accumulation in poor regions and/or marginalized communities within rich countries. Growing number of patients with drug resistant mutant Growing number of patients with drug-resistant mutant viruses and potential for transmission.

8th International Coinfection Workshop Madrid, May 30 - June 1, 2012 HIV HBV HCV www.virology-education.com

Acknowledgments Clinic Pablo Barreiro Pablo Labarga Luz Martin-Carbonero Eugenia Vispo Jose Medrano Jose V Fernandez Laboratory Norma Rallon Ana Treviño Carmen de Mendoza Eva Poveda Zulema Plaza Jose Miguel Benito