Farah Al-Khaled. Razi Kittaneh. Mohammad Omari

Similar documents
MahaAbuAjamieh. BahaaNajjar. MamoonAhram

Sheet #10 Dr. Mamoun Ahram Sec 1,2,3 15/07/2014. Carbohydrates 2

Dr. Nafith Abu Tarboush. Rana N. Talj

Long time ago, people who sacrifice their sleep, family, food, laughter, and other joys of life were called SAINTS. But now, they are called STUDENTS!

Carbohydrates. Chapter 12

24.1 Introduction to Carbohydrates

Ch13. Sugars. What biology does with monosaccharides disaccharides and polysaccharides. version 1.0

I. Carbohydrates Overview A. Carbohydrates are a class of biomolecules which have a variety of functions. 1. energy

Chapter 18. Carbohydrates with an Introduction to Biochemistry. Carbohydrates with an Introduction to Biochemistry page 1

Carbohydrates 1. Steven E. Massey, Ph.D. Assistant Professor Bioinformatics Department of Biology University of Puerto Rico Río Piedras

Carbohydrates. Dr. Mamoun Ahram Summer,

Fundamentals of Organic Chemistry. CHAPTER 6: Carbohydrates

Carbohydrates. Monosaccharides

Questions- Carbohydrates. A. The following structure is D-sorbose. (Questions 1 7) CH 2 OH C = O H C OH HO C H H C OH

Carbohydrates CHAPTER SUMMARY

For more info visit

Introduction to Carbohydrates

Number of Carbohydrate Units

BCH 4053 Spring 2001 Chapter 7 Lecture Notes

Carbohydrates. Organic compounds which comprise of only C, H and O. C x (H 2 O) y

Chapter 16: Carbohydrates

Chapter 23 Carbohydrates and Nucleic Acids. Carbohydrates

Topic 4 - #2 Carbohydrates Topic 2

CARBOHYDRATES (SUGARS)

Chapter 22 Carbohydrates

Dr. Entedhar Carbohydrates Carbohydrates are carbon compounds that have aldehyde (C-H=0) or ketone (C=O) moiety and comprises polyhyroxyl alcohol

Carbohydrates. Learning Objective

Chemistry B11 Chapters 13 Esters, amides and carbohydrates

Carbohydrates. Green plants turn H 2 O, CO 2, and sunlight into carbohydrates.

among the most important organic compounds in the living organisms;

Chapter 27 Carbohydrates

I (CH 2 O) n or H - C - OH I

CHAPTER 23. Carbohydrates

Welcome to Class 7. Class 7: Outline and Objectives. Introductory Biochemistry

A Getting-It-On Review and Self-Test. . Carbohydrates are

!"#$%&'()*+(!,-./012-,345(

2/25/2015. Chapter 6. Carbohydrates. Outline. 6.1 Classes of Carbohydrates. 6.1 Classes of Carbohydrates. 6.1 Classes of Carbohydrates

HW #9: 21.36, 21.52, 21.54, 21.56, 21.62, 21.68, 21.70, 21.76, 21.82, 21.88, 21.94, Carbohydrates

Chem 263 Nov 22, Carbohydrates (also known as sugars or saccharides) See Handout

BIOMOLECULES & SPECTROSCOPY TABLE OF CONTENTS S.NO. TOPIC PAGE NO. i) Carbohydrates B3. ii) Proteins & Nucleic Acids.

Chapter 20 Carbohydrates Chapter 20

Dr. Basima Sadiq Ahmed PhD. Clinical biochemist

CLASS 11th. Biomolecules

CHAPTER 27 CARBOHYDRATES SOLUTIONS TO REVIEW QUESTIONS

Review from last lecture

Carbohydrates. Chapter 18

Can you explain that monomers are smaller units from which larger molecules are made?

Chapter-8 Saccharide Chemistry

Org/Biochem Final Lec Form, Spring 2012 Page 1 of 6

A. Incorrect! No, this is not the description of this type of molecule. B. Incorrect! No, this is not the description of this type of molecule.

Chapter 24: Carbohydrates

Carbohydrates. What are they? What do cells do with carbs? Where do carbs come from? O) n. Formula = (CH 2

Downloaded from

Waseem Abu Obeida. Salsabeel Fleifal. Mamoon Ahram

Carbohydrate Chemistry

Carbohydrates: structure and Function. Important. 436 Notes Original slides. 438 notes Extra information

May 21 st, 2008 Biochemistry Recitation

Biochemistry: Macromolecules

IntroducKon to Carbohydrates

Part I => CARBS and LIPIDS. 1.2 Monosaccharides 1.2a Stereochemistry 1.2b Derivatives

Carbohydrate Structure

Chem 263 Apr 11, 2017

Lecture 2 Carbohydrates

Chapter 7 Carbohydrates

B.sc. III Chemistry Paper b. Submited by :- Dr. Sangeeta Mehtani Associate Professor Deptt. Of Chemistry PGGCG, sec11 Chd

Unit 3: Chemistry of Life Mr. Nagel Meade High School

What are Carbohydrates? Aldoses and Ketoses

IntroducKon to Carbohydrates

Biochemistry lecturer Bio- chemical Eng. Zahraa Abdulhussein Mousa. Bio.Eng Zahraa A.A. Mousa

Carbohydrates. Haworth Projections

BCH Graduate Survey of Biochemistry

Polymers: large molecules made up of repeating smaller units (monomer) peptides and proteins (Chapter 25) nucleic acids (Chapter 26)

Downloaded from

Chapter 7 Overview. Carbohydrates

Chemistry 107 Exam 3 Study Guide

Chemistry 1120 Exam 2 Study Guide

Macro molecule = is all the reactions that take place in cells, the sum of all chemical reactions that occur within a living organism Anabolism:

Sheet #8 Dr. Nafeth Abu-Tarboush

SPECIFICATION CONTINUED Glucose has two isomers, α-glucose and β-glucose, with structures:

The. Crash Course. Basically, almost all living things are made up of these 4 Elements: - Carbon (C) - Nitrogen (N) - Hydrogen (H) - Oxygen (O)

Structural Polysaccharides

Carbohydrates. Objectives. Background. Experiment 6

Chemistry 1050 Exam 3 Study Guide

MONOSACCHARIDES DISACCHARIDES POLYSACCHARIDES

Chemistry 106 Lecture Notes Examination 5 Materials. *Hydrated Carbons.

Carbohydrates - Chemical Structure

Dr. Nafith Abu Tarboush. Tarek Khrisat

You know from previous lectures that carbonyl react with all kinds of nucleophiles. Hydration and hemiacetal formation are typical examples.

Wallington County Grammar School

A BEGINNER S GUIDE TO BIOCHEMISTRY

Haworth structure for fructose

For questions 1-4, match the carbohydrate with its size/functional group name:

1 C 2 C 3 C 4 C 5 C 6 C 7 C 8 C

CARBOHYDRATES. Produce energy for living things Atoms? Monomer Examples? Carbon, hydrogen, and oxygen in 1:2:1 ratio.

Definition of a Carbohydrate

Nafith Abu Tarboush DDS, MSc, PhD

Basic Biochemistry. Classes of Biomolecules

Biochemistry: A Short Course

BIOCHEMISTRY UNIT 2 Part 4 ACTIVITY #4 (Chapter 5) CARBOHYDRATES

Chapter 11. Learning objectives: Structure and function of monosaccharides, polysaccharide, glycoproteins lectins.

Transcription:

7 Farah Al-Khaled Razi Kittaneh Mohammad Omari Dr. Mamoun Ahram

In this lecture we are going to talk about modified sugars. Remember: The Fischer projection can be turned into a ring structure (which is known as the Haworth projection) by a simple rule: right = down, left = up. Any hydroxyl groups on the right will be below the ring, and any on the left will be above the ring. As observed in the figure below Note: in physiological conditions, carbohydrates almost always exist in the ring structure because it s more stable Note: P a g e 1

Note: Once the ring is formed, hydroxyl groups positions are fixed, they don t interconvert or change position, this is true for (C-2, C-3, C-4 of glucose). But the hydroxyl group that is attached to the anomeric carbon (C-1 of glucose), it interconverts in a process called mutarotation to form either an alpha (when the hydroxyl group is below the ring) or a beta sugar (when the hydroxyl group is above the ring), in this way we name the molecule depending on the anomeric carbon. the doctor advised us not to confuse ourselves by trying to integrate D and L with the left-right/up-down rule. Most of compounds in the biological conditions are D-compounds. It s worth mentioning that we cannot metabolize L-compounds. Epimers: they are diastereomers that differ in the orientation of one chiral carbon, examples: D-Glucose and D-Mannose are carbon-2 epimers. D-Glucose and D-Galactose are carbon-4 epimers. You can go back to the previous slides (slide 3-page #21) and check it Reducing and Non-reducing sugars : If the hydroxyl group on the anomeric carbon of a cyclized sugar is not linked to another compound by a glycosidic bond (free anomeric carbon), then the ring can open, and we call it a reducing sugar. Modified Sugars 1-Oxidation (sugar acids) 2-Sugar alcohols + deoxysugars (reduction) 3-Sugar esters P a g e 2

1-Oxidation of sugars (sugar acids) Oxidation and reduction reactions of sugars play a very important role in terms of providing energy for organisms to carry out their life processes, as carbohydrates give the highest yield of energy when they are oxidized completely to CO2 and H2O Primary alcohol aldehyde carboxylic acid Secondary alcohol ketone Oxidation of glucose: The oxidation of C#6 Glucuronate The oxidation of C#1 Gluconate *(Gluconate is the ionic form of gluconic acid) Example 1: If we add a weak oxidizing agent, it causes only the aldehyde to be oxidized into carboxylic group. Note this reaction is used to test for the presence of aldoses P a g e 3

Example 2: Adding a strong oxidizing agent oxidizes both, the carbonyl group at the top carbon and the alcohol group at the bottom carbon to become carboxyl groups (carbon 6) to form galactaric acid Example 3: Some enzymes can cause oxidation of the primary alcohol attached to carbon #6 only Glucose glucuronic acid P a g e 4

Note: Can ketoses go through oxidation? Ketose itself can t be oxidized directly. But ketoses are in equilibrium with their isomers, aldoses and aldoses can be oxidized which ultimately results in an indirect oxidation of ketoses Methods to detect monosaccharides in solutions: 1-Benedict s test: A chemical reagent that is commonly used to detect the presence of reducing sugars. A positive test with Benedict's reagent is shown by a color change from clear blue to a red precipitate due to the reduction of the (Cu2 + ) in the reagent causing it to precipitate as insoluble red copper(i) oxide (Cu2O). Cu2+ is reduced, glucose is oxidized Depending on the degree of color obtained, we can determine the concentration of the sugar in the solution The more concentrated it is, the redder the solution will be. 2-Tollens test Ag(NH3)2 + : (SILVER MIRROR) This test is used to distinguish between aldehyde (oxidizable) and ketone (not oxidizable), silver ions are reduced to produce silver precipitate, and the product is Lactone. P a g e 5

3-Oxidation of cyclic sugars to form lactone: Using the enzyme glucose oxidase, this is a new method used only for the detection of glucose as the enzyme s active site is specific to glucose Vitamin C (aka: ascorbic acid) is an unsaturated lactone (ketone) Air oxidation of ascorbic acid, followed by hydrolysis of the ester bond, leads to loss of activity as a vitamin. A lack of fresh food can cause vitamin C deficiencies, which in turn, can lead to the disease scurvy. The doctor mentioned the example of pirates that suffer from teeth decay and gum diseases because collagen is the most abundant protein in our body, and it s essential for our teeth and gum. Vitamin c is essential for the hydroxylation process of collagen (recall: histology course) so any deficiency in vitamin C weakens collagen s structure which essentially causes scurvy. 2- Reduction of sugars (sugar alcohols): Carboxylic acid aldehyde primary alcohols Ketone secondary alcohol most of these sugar alcohols are used to sweeten the food example: sorbitol and xylitol and both important P a g e 6

deoxy sugars (reduced sugars) one or more hydroxyl groups are replaced by hydrogen atoms. An example: the sugar deoxyribose, a pentose sugar, found in DNA 3-Sugar esters (esterification): A) Phosphorylation Formation of phosphor-esters is an important in metabolic reaction Carbons involved are 1 or 6 Its process is adding a phosphate group to the sugar molecule If the phosphate bond is linked to C#6, a phosphate ester linkage is formed (this carries a lot of energy) If the phosphate bond is linked to C#1, it is a phosphoacetal linkage. Importance of phosphate group on the sugar: molecule becomes a high energy molecule so can proceed further in the reaction. cell may use phosphorylation to produce ATP +co2+h2o phosphorylation may change glucose to glycogen and when we need ATP breaks it down B) Glycosides Its reaction occurs between the hydroxyl group (at the anomeric carbon) and an alcohol to form a glycosidic bond. When the reaction occurs at C#1 in the ring, the ring will not open (so these reactions basically lock the ring) and no mutarotation occurs. It stabilizes the ring structure of the sugar molecule This reaction is important in the formation of disaccharides, where an anomeric carbon of a monosaccharide forms a glycosidic linkage with another monosaccharide (not necessarily another anomeric carbon though) P a g e 7

This reaction involves: O-glycosides & N-glycosides O-glycosides: Each sugar is bonded to an oxygen atom of another molecule This occurs when the reaction is with an alcohol (o-glycocidic bonds) N-glycosides: An amino group ( NH2) or one of its derivatives is substituted for the hydroxyl group in the parent sugar (n-glycocidic bonds) EX: nucleotides (DNA and RNA) Note: Glycosides derived from furanoses are called furanosides, and those derived from pyranoses are called pyranosides, regardless if they are N- or O- linked. Amino sugars: How it differs from N-glycosides: the amino group is NOT on the anomeric carbon (this means that anomeric carbon is essentially involved in the formation of N- glycosides) Further modification by acetylation. Anomeric carbon: is originally the carbonyl group (the former carbonyl group), it is the asymmetric (chiral) carbon that is formed when a sugar cyclizes, so its aldehyde (or ketone) group reacts with a hydroxyl group (OH) on the same sugar, P a g e 8

making the carbonyl carbon (carbon 1 for an aldose, carbon 2 for ketoses) asymmetric. It is called anomeric carbon because it can form anomers (α or β) And the last topic at this sheet is: Disaccharides They are a type of sugars which consist of 2 monosaccharide monomers joined together by a glycosidic bond, they are very stable and cannot be deformed except by enzymes Disaccharides are formed by enzymes called glycosyltransferases As mentioned previously, no mutarotation occurs in disaccharides since they are formed by glycosidic bonds A residue as a definition is each subunit of the compound Example: a compound: amino acid +amino acid +amino acid Each amino acid is residue While outside the compound its only amino acid Distinctions of Disaccharides When we want to differentiate between 2 disaccharides and classify a disaccharide, we have certain distinctions to follow: 1. The 2 specific sugar monomers involve and their stereo configurations (D- or L-) D: OH, above the ring L: OH, below the ring in living organisms D-sugars are mainly present Mostly in nature the sugars exist in the D- stereo configuration in bacteria, L-configurations of the sugars are present, but mainly they re in D-configurations In the human body L-sugars can t be metabolized. Thus, we deal with D- sugars in our books and lectures P a g e 9

2. The carbons involved in the linkage (C-1, C-2, C-4 or C-6) We have to determine which carbons are involved in the glycosidic bond. Note that every bond consists of at least one anomeric carbon, but not necessarily two. So, an anomeric carbon might bind to any non-anomeric carbon of other compound in the formation of glycosidic bonds. 3. The order of the two monomer units, if different (example: galactose followed by glucose) 4. The anomeric configuration of the OH group on carbon 1 of each residue (α or β) There are many common disaccharide: 1-Maltose: It s a sugar made from 2 glucose molecules (D-glucose) The OH groups of both monomers at the anomeric carbon are below the ring, therefore they re both α The glycosidic bond is between carbons 1 and 4, respectively Hence the bond is an α-1,4- glycosidic bond It is classified as a reducing sugar as the anomeric carbon is free in the molecule located on the right Study the figure carefully and understand why we said the previous compound is maltose 2-Lactose: It s the sugar found in milk (additional info: The name comes from lac, the Latin word for milk, plus the suffix -ose used to name sugars.) Lactose is a disaccharide made up of β-d-galactose and α-d-glucose The galactose molecule is a β molecule since the OH group of C#1 is above the ring P a g e 10

The glucose molecule is an α molecule since the OH group of C#1 is below the ring Galactose is the C#4 epimer of glucose The glycosidic bond is between carbons 1 and 4, respectively Hence the bond is a β-1,4-glycosidic bond: the anomeric carbon involved in the glycosidic bond is in the β configuration It is classified as a reducing sugar as the anomeric carbon is free in the molecule located on the right. again, study why the previous compound is lactose 3-Sucrose: Sucrose is a disaccharide made up of α-glucose and a β- fructose The glucose molecule is an α-molecule since the OH group of C#1 is below the ring The fructose molecule is a β-molecule since the OH group of C-2 is above the ring In order to form sucrose in a condensation reaction between α-glucose and a β- fructose, the fructose molecule is flipped sideways The glycosidic bond is between carbons 1 and 2, respectively Hence the bond is an α,β-1,2- glycosidic bond: 2 anomeric carbons are involved in the glycosidic bond and one is α, the other is β It is classified as a non-reducing sugar as both anomeric carbons are involved in the glycosidic linkage Like this the lecture end the next lecture we will continue talking about sucrose and the other type of sugars... REMEMBER: IF IT WAS EASY EVERYBODY WOULD DO IT P a g e 11