Centers for Disease Control and Prevention Zika Diagnosis: Challenges and Opportunities

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Centers for Disease Control and Prevention Zika Diagnosis: Challenges and Opportunities Jorge L. Muñoz-Jordán, Ph.D. Chief, Surveillance and Research Laboratory Centers for Disease Control and Prevention Division of Vector Borne Diseases San Juan, Puerto Rico

Zika, dengue and chikungunya Three similar diseases Transmitted by the same mosquitoes Similar geographical distribution (approx. 100 countries) 2 billion people at risk of infection every year Currently, there are no vaccines or therapeutics commercially available for Zika, dengue and chikungunya virus infections Dengue, 2016 Chikungunya, 2015 Zika, 2017

Zika, dengue and chikungunya Common Symptoms Febrile Illness Rash Body aches Specific symptoms/risks Dengue: hemorrhagic disease Chikungunya: severe arthritis Zika: Guillain Barre syndrome and birth defects

Integrated diagnosis and care of dengue, chikungunya and Zika cases

The changing landscape of arbovirus diagnostics Before Chik or Zika -Good understanding of dengue test sensitivity and specificity After Chikungunya - Limited chikungunya test options compared to dengue - Unaltered dengue test sensitivity or specificity After Zika - Unspecific dengue and Zika immunodiagnostics - Increased need for screening asymptomatic individuals for recent and previous infections

Diagnostic markers in serum during symptomatic infections Virus IgM antibodies Days of illness -7 0 7 14 Diagnostic WIndow

Sensitivity of Dengue Diagnostic Tests Based on CDC study of 1200 paired samples from confirmed dengue cases Hunsperger et al, 2016

New Diagnostic Challenges Flavivirus serological cross-reaction IgM and IgG cross reactivity, particularly in secondary flavivirus infections and in co-endemic areas Large proportion of asymptomatic infections Need for detection of IgG antibodies to determine immune status (previous exposure) due to ZIKV and DENV infections. - Screening of pregnant women or women of reproductive age - Screening of potential dengue vaccine recepients

P/N P/N Traditional MAC-ELISAs Cannot Differentiate ZIKV vs DENV Infections ZIKV IgM test DENV IgM test 60 80 50 40 70 60 50 30 20 10 40 30 20 10 0 ZIKV+ DENV+ NEG (AFI) 0 ZIKV+ DENV+ NEG (AFI) 103/103 (100%) 78/134 (58%) 35/103 (34%) 134/134 (100%)

Percent confirmation of Zika IgM positive results by PRNT (90) PRNT (90) Interpretation US States (n=759) USVI (n=52) American Samoa (n=103) ZIKV infection 27 21 15 11 Unspecified flavivirus infection 48 62 83 84 DENV infection 9 8 1 6 Negative 19 10 1 0 Puerto Rico (n=123) Lindsey et al, 2018 Study od symptomatic and asymptomatic infections, including pregnant women

Potential of PRNT (50) to confirm Zika infections in people with or without previous dengue Longitudinal neutralizing antibody responses against dengue virus serotypes 1 4 (DENV1 4) and Zika virus (ZIKV) in samples obtained after ZIKV infection. (Montoya et al, 2018)

ZIKV/DENV ratio ZIKV/DENV ratio The ZIKV/DENV Duo MAC-ELISA can Discriminate ZIKV vs DENV Infections ZIKV/DENV Duo for ZIKV ZIKV/DENV Duo for DENV 30 40 20 30 20 10 10 0 ZIKV+ DENV+ NEG (AFI) 0 DENV+ NEG (AFI) 103/103 (100%) 0/133 (0%) 133/133 (100%) * One DENV+ specimen was equivocal

Recent lessons on Immunoassay Development Dengue vs Zika ratios increase specificity of IgM tests without reducing sensitivity: E.g. InBios Zika Detect test (Granger et al. 2017) CDC Tri-ELISA (under development) NS1 antibody detection tests are more specific than E antibody detection tests, but with some reduction in sensitivity E.g. EuroImmune (Lustig et al. 2017) BOB ELISA, Balmaseda et al, 2017 Differential avidity of antibodies for dengue and Zika E and NS1/NS5 antigens (Wong et al, 2017)

Increased reliance on molecular testing Highly sensitive during acute illness Approx. 60-75% of cases (Zika, dengue or chik) can be diagnosed during the first 6 days of illness Useful as confirmatory test for dengue or Zika IgM positive cases PRNT less useful in areas of flavivirus co-endemicity Long Zika viremias in pregnant Recommendation to test in 3 trimesters of pregnancy Able to detect pathogens in all fluids and tissues

Characteristics of the CDC-Trioplex RT-PCR assay Detects DENV (no subtyping), CHIKV and ZIKV Recommended for serum collected 0-7 DPO Recommended for urine, amniotic fluid and CSF (paired with serum) Contains internal control Adapted and validated for widely available equipment

Comparative analytical sensitivity of Zika Vvirus NATs Relative analytical sensitivity of donor nucleic acid amplification technology screening and diagnostic real-time polymerase chain reaction assays for detection of Zika virus RNA * Stone et al, Transfusion (2016) *Donor screening NAT includes the RMS and Hologic NAT assays; CDC Puerto Rico (PR) low-input (LI) assay results were combined for Singleplex and Trioplex versions of the Trioplex assay (Trioplex-LI).

Utility of the CDC Trioplex RT-PCR by sample types Santiago et al, 2018

Persistence of Zika virus in body fluids Paz-Bailey et al, 2017

Possible Routs for Test Development 1- Symptomatic Patients: Increase sensitivity of multiplexed (dengue/chik/zika) antigen- or nucleic acid-based tests Increase specificity of IgM tests (E.g. Duo ELISA for Zika/dengue detection and differentiation) 2- Asymptomatic or post-symptomatic: Specific dengue and Zika IgG detection Screening for asymptomatic pregnant women Applications for vaccine evaluations and effectiveness

Acknowledgments CDC Dengue Branch Surveillance and Research Lab Epidemiology Team CDC Arbovirus Diseases Branch CDC Office of Public Health and Preparedness Ponce Health Sciences School, University of Ponce