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J Med Genet 1991; 28: 591-595 Use of probes for ZFY, SRY, and the Y pseudoautosomal boundary in XX males, XX true hermaphrodites, and an XY female Eliana Ternes Pereira, J C Cabral de Almeida, A C Y R G Gunha, Michael Patton, Rohan Taylor, Stephen Jeffery Abstract Three XX males, two XX true hermaphrodites, and an XY female were studied for possible deletions using probes for the recently characterised SRY gene and the pseudoautosomal boundary. The XX males and true hermaphrodites were negative for all three probes, while the XY female was positive. One XX male and one XX true hermaphrodite were sibs. A previous sib pair of an XX male and an XX true hermaphrodite have been shown to be positive for Y chromosomal material near the pseudoautosomal boundary. Thus, both phenotypes can be produced from different mutations, some involving the SRY gene and others not. The search for a gene that induces the first event in testis differentiation has been directed to the sequences of the short arm of the Y chromosome present in XX males. The smallest amount of that region was recognised in three XX males and one XX true hermaphrodite who were negative for more proximal Y sequences and for the ZFY gene.' This finding led to a chromosome walk spanning the 35 kb segment proximal to the pseudoautosomal boundary sequence in the Y chromosome, and a recognition of Departmento de Clinica Medica, Universidade Federal de Santa Catarina 88000, Brazil. E T Pereira Instituto de Biofionica, Universidade Federal do Rio de Janeiro 20000, Brazil. J C Cabral de Almeida, A C Y R G Gunha South West Thames Regional Genetics Unit, St George's Hospital Medical School, Cranmer Terrace, London SW17 ORE. M Patton, R Taylor, S Jeffery Correspondence to Dr Jeffery. Received for publication 7 February 1991. Revised version accepted for publication 18 March 1991. the SRY gene with the characteristic of a transcription factor.2 From 50 consecutive sequences recognised in this search, only one, PY53-3, was found to be present in some XX males and conserved in all eutherian mammals tested. Its homologue in the mouse (p4 2 2) was found in the mutant SXrl that contains the minimum portions of the mouse Y chromosome known to contain the testis determining factor. Transcripts of the SRY mouse homologue were found in the embryonic gonad during the state of Sertoli cell differentiation.3 This evidence makes SRY the best candidate to date for the testis determining factor (TDF) on the Y chromosome in man. The ZFY gene, previously considered as a possible TDF, has now been shown to map 60 kb proximal to the Y pseudoautosomal boundary and is excluded as a candidate for TDF.45 Nevertheless, ZFY has been recognised in about 70% of the XX males tested6 and, in conjunction with probes for the pseudoautosomal boundary region, it can be used to localise segments of the Y chromosome missing or transferred in persons with sex chromosome anomalies. In view of the discovery of the SRY gene, we used probes spanning the region of the Y chromosome from the pseudoautosomal boundary to the ZFY gene to examine the DNA from six subjects: three XX males, two XX true hermaphrodites, and one XY female. Two of the patients, one XX male and one XX true hermaphrodite, reared as a male, are brothers and were studied previously with the ZFY probe.7 Materials and methods PATIENTS The sporadic cases have not been published previously. The XY female is of Caucasian origin and the other three subjects are Brazilian. FAMILIAL CASES 591 Case 1 was 14 years old. The karyotype was 46,XX in blood lymphocytes and skin fibroblasts (G and C

592 banding) and he has been reared as a male. There was a uterus, bilateral fallopian tubes, a vagina, a left ovotestis, right perineal hypospadias, and a right testis with epididimus and deferens. The ovarian portion contained stroma, follicles, and ova, and the testicular tissue showed seminiferous tubules, hyalinisation, and fibrosis. Case 2 was 17 years old. Karyotype analysis was the same as in the brother, case 1. There was perineal hypospadias, small bilateral testes normally placed, and absence of Mullerian structures. Testicular biopsy showed seminiferous tubules, hyalinisation, and fibrosis. SPORADIC CASES Case 3 was 2 years old. The karyotype was 46,XX in blood lymphocytes (G and C banding) and he has been reared as a male. There was perineal hypospadias, bilateral cryptorchidism, and absence of Miillerian structures. Testicular biopsy showed seminiferous tubules and Sertoli cells. Case 4 was 4 years old. The karyotype was 46,XX in blood lymphocytes (G and C banding) and he has been reared as a male. There was normal male external genitalia with right cryptorchidism and absence of Mullerian tubules. Case 5 was 13 years old at the time of diagnosis. The karyotype was 46,XX and she was negative for Y centromeric specific probe Y-97 and probe Y190. She has been reared as a female. There was hypertrophy of the phallus, a right ovotestis, a left ovary, bilateral fallopian tubes, a uterus, and a vagina. Ovarian tissue with stroma follicles and ova was present as well as testis tissue with seminiferous tubules. The left ovary was considered normal and was left in its place. The ovotestis was removed. The patient underwent normal puberty and four pregnancies. The first pregnancy ended at 6 months with a stillbirth of undefined sex. Then she had two normal sons with normal 46,XY karyotypes. The last pregnancy was continuing normally at the last medical visit at the age of 27. Case 6 was 4 years old. The karyotype was normal, 46,XY (G and C banding) and she has been reared as a female. There was normal external genitalia, bilateral fallopian tubes, a uterus, a vagina, and bilateral streak gonads. SOUTHERN BLOTTING DNA was extracted using the method of Kunkel et al.8 Restriction enzymes were used as recommended by the manufacturer (Anglian). One percent agarose gels were made up in TBE buffer (electrophoresis was carried out in the same buffer) and DNA was transferred from the gel to nylon membranes using the method of Southern.9 Either Hybond N or Pereira, Almeida, Gunha, Patton, Taylor, Jeffery Hybond N + membranes from Amersham were used. In the former case blotting was overnight using 20 x SSC, for N+ the process took five hours using 0-4 mol/i NaOH. Filters were prehybridised with 0 5 mol/l sodium phosphate/7/. SDS with 200 pg/ml denatured salmon sperm DNA. Prehybridisation and hybridisation were performed at 65'C in a Bachoffer hybridisation oven. The hybridisation solution was the same as that used in the prehybridisation, plus a radioactive probe. Prehybridisation times were one hour for Hybond N and three hours for N+. Hybridisation was overnight. Autoradiographs were developed overnight using Amersham Hyperfilm MP. LABELLING OF PROBES Probes SRY and pmf-1, which detects the ZFY gene, were kindly provided by Dr Peter Goodfellow. The plasmids were grown in E coli strain RR1 and purified using Qiagen columns as recommended by the manufacturer (Hybaid). Insert DNA was cut with the appropriate restriction enzymes, separated from vector DNA in a 1% agarose gel, and electroeluted; 100 ng of insert was used in a random hexanucleotide labelling reaction (Amersham) with 32P_ dctp. PCR Primers specific for the X and Y chromosomal sequences and a primer for the pseudoautosomal region were provided by Dr Peter Goodfellow and their sequences are given in Ellis et al.10 Amplification was performed using a Techne PHC-2 block with 30 cycles at 94 C for one minute, 54'C for one minute, and 72 C for one minute; 500 ng DNA was used per reaction, with one unit of Amersham Taq polymerase in manufacturer's buffer. All three primers were used in each reaction. Products were separated in a 2% agarose gel in TBE buffer and stained with ethidium bromide. Results The three XX males and two true hermaphrodites produced a female pattern of bands using the ZFY probe. The XY female showed the same pattern as a normal male. Fig 1 shows the results obtained using the ZFY probe. Controls were a normal male and female and a male with a 46,Y,t(X;Y)(Xp22.3;Yql 1) karyotype. Fig 2 illustrates the amplification products using primers for the pseudoautosomal boundary. Those samples which gave a female pattern with ZFY produced no bands with the pseudoautosomal primers, while the XY female was positive with PCR. Thus, the XX males and true hermaphrodites

Use of probes for ZFY, SRY, Y pseudoautosomal boundary in XX males, XX true hermaphrodites, and XYfemale 593 patients usually develop dysgenetic testes23 instead of ovotestes. -;w In families where XX males and XX true herm- 2 3 4 5 6 7 8 aphrodites occur as sibs,717 or in families where sibs Figure Southern blot of EcoRI digests probed with exhibit the XX male condition and abnormal geni- PMF.Ii 1 (detects ZFY gene). Track (1) normal male, talia,20 subjects have mostly been negative for (2) XX male, case 4, (3) XYfemale, case 6, (4) XX chromosome specific probes. The isolated cases of Y male, casre 3, (5) 46,,t(X;7Y) male, (6) XX true negative XX males usually have ambiguous genitalia hermaph? (8) XX true hermaphrodite, case 5. The additional band in and this has been taken as evidence for a common track 3 iss a partial digest and was not apparent in this origin with XX true hermaphrodites.720 XX mal high rat region p location in the p male group that comprises a third of the cases studied up to now.'7 This category usually has variable degrees of hypospadias and gynaecomastia.620 True hermaphroditism in humans shows genotypic heterogeneity. In 60% of cases the karyotype was 46,XX and in 12% 46,XY; 13% were chimeras 46,XX/46,XY and the remainder were mosaics with normal or abnormal Y chromosomes.2122 At first sight, this picture suggests that either the XX cases have some Y chromosome material, or that in most of the cases the abnormality in the differentiation of the bipotential gonad occurs at a stage after expression of the putative TDF gene. It is interesting to note that in the structural abnormalities of the Y chromosome with or without a 45,X lineage, the sample o? n other blots. To date, only two XX true hermaphrodite patients showing hybridisation with Y chromosome material have been reported by Palmer et all and Jager et al.24 The patient described by Palmer et all gave th4 e same bands as normal females when ana- had an XX male brother with hypospadias. Both sibs lysed writh ZFY and pseudoautosomal probes. To were positive for the Y specific boundary sequence' determi. ne whether there had been a small amount of and the SRY gene. Y chronnosomal DNA transferred to the XX males, Our familial cases, one XX true hermaphrodite or deletoed from the XY female, the SRY probe was and an XX brother, showed no hybridisation with used on HindIII digests of DNA. The results are either of the two proposed TDF genes (SRY or shown iin fig 3. Once again, the XX males and true ZFY), which agrees with previous reports2025 for the hermap] hrodites were negative for the SRY probe familial or sporadic cases of XX true hermaphrodand the XY female gave the same band pattern as the ites. Our results, together with the family described male co: ntrols. by Palmer et al,' imply that even in the familial cases the two conditions are heterogeneous with respect to the presence of Y chromosome material. Mittwoch26 proposed that the Y chromosome Discus! sion DNA sequences concerned with 'testis determina- study showed absence of the Y specific tion' may act by enhancing cell division in the The present boundairy sequence and the SRY and ZFY genes in relevant gonadal cells, thus accelerating gonadal two spolradic XX males, one sporadic true hermaph- development. On the assumption that testes need to rodite, amd two sibs, one XX male and one XX true differentiate early, the Y chromosome could thus hermap] hrodite. The same Y sequences were present function to minimise the chance element in XY in one ) CY female. fetuses of the gonad entering the ovarian pathway The Ihypothesis of an X;Y translocation in the and to maximise the probability of their developing paternal meiosis, proposed by Therkelsen" in 1964 as males. The proposition does not exclude the and Ferl guson Smith'2 in 1966, as the origin for some presence of a Y directive gene, the best candidate [es has been largely confirmed,'3-'8 with the being the SRY gene, functioning as the first switch :e of recombination in the pseudoautosomal event in normal males and absent in XX normal 'redisposing to unequal crossover and trans- females. S.9Unlike these cases, the XX male patients Among those patients who are Y negative XX resent study belong to the Y negative XX males and XX true hermaphrodites, there may be

594 1 2 3 4 5 6 7 8 9 10 11 12 13 14 activation of a mechanism downstream in the pathway from the TDF gene which leads to the first switch of Sertoli cell differentiation. From the familial cases presented here and elsewhere,717 it is apparent that the same mechanism that can induce complete testis formation in an XX male is not necessarily enough to differentiate all the indifferent gonad cells into one testis in the XX true hermaphrodites. Which endpoint is reached seems to be a matter of chance or the result of action on the embryonic cells of one or more as yet unidentified factor(s). In the cases presented here and by Palmer et al,l there is a variation in the gonadal differentiation. The Y positive hermaphrodite described by Palmer et all had bilateral ovotestes. Our familial cases had one fully developed testis and one ovotestis, while our sporadic case of true hermaphroditism had one fully developed ovary with an ovotestis. At least 11 XY female patients have been described with deletions including the TDF region of the Y chromosome.'627-32 However, the XY female studied here did not show deletions of the Y chromosome, including SRY, as has also been described in other cases.4 The presence of the SRY gene in an XY female obviously does not show that the gene is functional; there could be microdeletions or point mutations in these subjects leading to a lack of gene product or an inactive protein. The absence of the SRY gene in XX males and XX true hermaphrodites shows that this gene is not 1 2 3 4 5 6 7 8 9 10..... Pereira, Almeida, Gunha, Patton, Taylor, J7effery Figure 2 PCR amplification across the X and Y pseudoautosomal boundaries. Track (1) negative control, (2) normal female, (3) normal male, (4) 46, Y,t(X;Y) male, (5) normal male, (6) XX male, (7) XX male, (8) XX male, case 2, (9) blank, (10) XX true hermaphrodite, case 1, sib of case 2, (11) XX true hermaphrodite, case 5, (12) XYfemale, case 6, (13) negative control, (14) 1 kb ladder. Primer sequences are given in reference 10. essential for testis determination. These are very rare cases, however, where a mutation in the proposed pathway controlled by the product of the SRY gene may have allowed testis development in the absence of that gene product. In normal males, the SRY gene seems likely to be the initial switch in the process leading to the production of testis. Demonstration of this gene in those cases of XX males with known translocation of Y material will increase the probability that SRY is indeed TDF. Sequence analysis of the DNA from XY females who are positive for SRY, as in the case presented here and those of Ferguson-Smith et al,4 should show whether these subjects have an inactive gene or perhaps a mutation elsewhere in the pathway of gonadal differentiation. In this respect, it is of interest that two XY females have recently been reported as showing mutations in the SRY gene.33 Elucidation of the structure of the SRY gene product and, from that, its possible mode of action, will provide more information on the starting point in this pathway. We would like to thank Dr Peter Goodfellow's group for probes, advice, and encouragement, especially Dr Andrew Sinclair. We gratefully acknowledge support from CAPES (Postgraduate Education Federal Agency), Brazil for Dr Pereira. We thank Dr Ian Young (Leicester Royal Infirmary) for blood samples from the XY female and Professor Ursula Mittwoch (Department of Anatomy, Queen Figure 3 Southern blot of HindIII digests probed with SR Y cdna. Tracks I to 8 are as forfig 1. Track 9 is a normal male, track 10 a normalfemale.

Use of probes for ZFY, SR Y, Y pseudoautosomal boundary in XX males, XX true hermaphrodites, and X Y female 595 Mary and Westfield College) for helpful advice on the manuscript. 1 Palmer MS, Sinclair AH, Berta D, et al. Genetic evidence that ZFY is not the testis-determining factor. Nature 1989; 342:937-9. 2 Sinclair AH, Berta P, Palmer MS, et al. A gene from the human sex-determining region encodes a protein with homology to a conserved DNA-binding motif. Nature 1990;345:240-4. 3 Gubbay J, Collignon J, Koopman P, et al. A gene mapping to sex-determining region of the mouse Y chromosome is a member of a novel family of embryonically expressed genes. Nature 1990;346:245-50. 4 Ferguson-Smith MA, North MA, Affara NA, Briggs H. The secret of sex. Lancet 1990;336:809-10. 5 Page DC, Fisher EM, McGillivray B, Brown LG. Additional deletion in sex-determining region of human Y chromosome resolves paradox of 46X,t(Y;22) female. Nature 1990; 346:279-81. 6 Ferguson-Smith MA, Cooke A, Affara NA, Boyd E, Tolmie JL. Genotype-phenotype correlations in XX males and their bearing on current theories of sex determination. Hum Genet 1990;84: 198-202. 7 Abbas N, Bouceckine C, Moreira-Filho CA, Ternes Pereira E, Cabral de Almeda JC, Fellous M. Familial cases ofxx males: argument for a common origin of Y negative 46,XX male and true hermaphrodites. Cytogenet Cell Genet 1989;51:948. 8 Kunkel LM, Smith KD, Boyer SH, et al. Analysis of human Y-chromosome specific reiterated DNA in chromosome variants. Proc Natl Acad Sci USA 1977;74:1245-9. 9 Southern EM. Detection of specific sequences among DNA fragments separated by gel electrophoresis. Mol Biol 1975;98:503-1 7. 10 Ellis N, Kidd J, Goodfellow PJ, Kidd K, Goodfellow P. Strong linkage disequilibrium between the XY274 polymorphism and the pseudoautosomal boundary. Am Hum Genet 1 990;46:950-5. 11 Therkelson AJ. Sterile male with chromosomal constitution, 46,XX. Cytogenetics 1964;3:207-18. 12 Ferguson-Smith MA. X-Y chromosomal interchange in the aetiology of true hermaphrodites and XX Klinefelter's syndrome. Lancet 1966;i:475-6. 13 Magenis RE, Casanova M, Fellous M, Olson S, Sheeny R. Further cytologic evidence for Xp-Yp translocations in XX males using in situ hybridization with Y-derived probe. Hum Genet 1978;75:228-33. 14 Page DC, de la Chapelle A, Weissenbach J. Chromosome Y-specific DNA in related human XX males. Nature 1985; 315:224-7. 15 Ferguson-Smith MA, Affara NA, Magenis RE. Ordering of Y-specific sequences by deletion mapping and analysis of X-Y interchange in males and females. Development 1987;101(suppl):41-50. 16 Muller U, Donlon T, Schmid M, et al. Deletion mapping of the testis determining locus with DNA probes in 46,XX males and in 46,XY and 46,X,dic(Y) females. Nucleic Acids Res 1986;14:6489-504. 17 de la Chapelle A. The Y-chromosomal and autosomal testisdetermining genes. Development 1987;1O1(suppl):33-8. 18 Affara NA, Ferguson-Smith MA, Tolmie J, et al. Variable transfer of Y-specific sequences in XX males. Nucleic Acids Res 1986;14:5375-87. 19 Weissenbach J, Le Villiers J, Petit C, Rouyer F, Simmler MC. Normal and abnormal interchanges between the X and Y chromosome. Development 1987;101(suppl):67-74. 20 Abbas NE, Toublanc JE, Boucekkine C, et al. A possible common origin of Y-negative human XX males and XX true hermaphrodites. Hum Genet 1990;84:356-60. 21 Polani PE. Hormonal and clinical aspects of hermaphroditism and the testicular feminizing syndrome in man. Philos Trans R Soc (Lond) (B) 1970;259:187-204. 22 Simpson JL. True hermaphroditism: etiology and phenotypic considerations. Sex differentiation and chromosomal abnormalities. Birth Defects 1978;XIV(6):9-35. 23 Daniel A, Lyons N, Casey JH, Gras L. Two dicentric isochromes, one without the Yq heterochromatic segment. Review of the Y isochromes. Hum Genet 1980;54:31-9. 24 Jager R, Ebensperger C, Fraccaro M, Steinbach P. A ZFYnegative 46,XX true hermaphrodite is positive for the Y pseudoautosomal boundary. Hum Genet 1990;85:666-9. 25 Damiani D, Billerbeck AEC, Goldberg ACK, Setian N, Fellous M, Kalil J. Investigation of the ZFY gene in XX true hermaphroditism and Swyer syndrome. Hum Genet 1990;85:85-8. 26 Mittwoch U. Sex, growth and chance. Nature 1990;344:389-90. 27 Boyd E, Cooke A, Jamieson D, Kwok K, Mitchell N, Snadden L. Mapping the testis determinants by an analysis of Y-specific sequences in males with apparent XX and XO karyotypes and females with XY karyotypes. Nucleic Acids Res 1987;15:7325-42. 28 Disteche CM, Casanova M, Saal H, et al. Small deletions of the short arm of the Y chromosome in 46,XY females. Proc Natl Acad Sci USA 1986;83:7841-4. 29 Magenis RE, Tochen NL, Holahan KP, Carey T, Allen L, Brown MG. Turner syndrome resulting from partial deletion of Y chromosome short arm: localisation of male determinants. J Pediatr 1984;105:916-19. 30 Rosenfeld RG, Luzzatti L, Hintz RL, Miller OJ, Koo GC, Wachtel SS. Sexual and somatic determinants of the human Y chromosome: studies in a 46 XYp - phenotypic female. Am J Hum Genet 1979;31:458-77. 31 Le Villiers J, Quack B, Weissenbach J, Petit C. Exchange of terminal portions of X and Y chromosomal short arms in human XY females. Proc Natl Acad Sci USA 1989;86:2296-300. 32 Blagowidow N, Page DC, Huff D, Mennuti MT. Ulrich- Turner syndrome in one XY female fetus with deletion of the sex-determining portion of the Y chromosome. Am J Med Genet 1989;34:159-62. 33 Berta P, Hawkins JR, Sinclair AH, et al. Genetic evidence equating SRY and the testis determining factor. Nature 1990;348:448-50. 34 Jager RJ, Anvret M, Hall K, Scherer G. A human XY female with a frame shift mutation in the candidate testis-determining gene SRY. Nature 1990;348:425-54. J Med Genet: first published as 10.1136/jmg.28.9.591 on 1 September 1991. 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