CHANGING TRENDS IN ANTIBIOGRAMS OF SALMONELLA ENTERICA IN PEDIATRIC POPULATION-A HOSPITAL BASED STUDY

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CHAPTER 10 Typhoid fever Infectious Disease

Global Burden of Typhoid Fever

Potent Antibiotic to Treat Typhoid Fever in Patients of Pediatric Age-group

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CHANGING TRENDS IN ANTIBIOGRAMS OF SALMONELLA ENTERICA IN PEDIATRIC POPULATION-A HOSPITAL BASED STUDY

Intro final Global burden as estimated in year 2000 Typhoid fever 21.65 million cases/yr Paratyphoid fever 5.4 million cases/yr Asia-10.1 million/yr Crump JA, Luby SP, Mintz ED (2004)The global burden of typhoid fever. Bull World Deaths-2,16,510/yr Health Organ 5: 346-353.. Crump JA, Luby SP, Mintz ED (2004)The global burden of typhoid fever. Bull World Health Organ 5: 346-353..

WORLDWIDE DISTRIBUTION OF ANTIMICROBIAL DRUG RESISTANCE IN SALMONELLA enterica serovar Typhi Crump JA, Sjölund-Karlsson M, Gordon MA, Parry CM. 15 July 2015. Epidemiology, clinical presentation, laboratory diagnosis, antimicrobial resistance, and antimicrobial management of invasive Salmonella infections. Clin Microbiol Rev doi:10.1128/cmr.00002-15.

Since its introduction in 1948, chloramphenicol has been the treatment of choice for typhoid fever Plasmid mediated chloramphenicol resistance emerged in S.typhi in the early 1970s Ampicillin and co-trimoxazole were found to be effective alternative drugs until late 1980s when they became resistant due to the rampant use. V Lakshmi. CHANGING TRENDS IN THE ANTIBIOGRAMS OF SALMONELLA ISOLATES AT A TERTIARY CARE HOSPITAL IN HYDERABAD

Multidrug resistance, defined as resistance to the three first-line classes of antimicrobial agents (chloramphenicol, ampicillin, and trimethoprim / sulphamethoxazole) Global burden of MDR enteric fever (Majority South Asia) 50% to 80% of all S. Typhi isolates 25% of MDR S. Paratyphi Farah Naz Qamar.A three-year review of antimicrobial resistance of Salmonella enterica serovarstyphi and Paratyphi A in Pakistan.J Infect Dev Ctries 2014; 8(8):981-986

Fluoroquinolones became the first-line drug since 1980 after emergence of MDR strains. However, from 2000 onwards, there has been a dramatic rise in fluoroquinolone-resistant S. Typhi isolates Mortality and complications are higher in MDR strains of S.typhi and paratyphi and fluroquinolone resistant cases. Emergence of MDR enteric fever has necessitated use of newer antibiotics F.N. Qamar. et al.a three-year review of antimicrobial resistance of Salmonella enterica serovars Typhi and Paratyphi A in Pakistan.J Infect Dev Ctries 2014; 8(8):981-986 F.N. Qamar et al..challenges in measuring complications and deaths due to invasive salmonella infections. Vaccine 33 (2015) C16 C20

High levels of multidrug and fluoroquinolone resistance have made cephalosporins the drug of choice for empiric therapy in SouthAsia Since the 1990s, azithromycin has been showing good results and is a promising alternative to fluoroquinolones and cephalosporins Azithromycin resistant S. Typhi and S. Paratyphi A have been reported from Delhi (MIC 24 mg/ml), Pakistan (MIC 64 mg/ml) and Cambodia (MIC 96 mg/ml),which is a threat. Recent studies have shown a shifting of susceptibility to conventional drugs like chloramphenicol, ampicillin and cotrimoxazole Farah Naz Qamar.A three-year review of antimicrobial resistance of Salmonella enterica serovarstyphi and Paratyphi A in Pakistan.J Infect Dev Ctries 2014; 8(8):981-986 Dutta S, et al. (2014) Antimicrobial Resistance, Virulence Profiles and Molecular Subtypes of Salmonella enterica Serovars Typhi and Paratyphi A Blood Isolates from Kolkata, India during 2009-2013. PLoS ONE 9(8): e101347

To analyze the antibiotic sensitivity pattern of culture positive enteric fever. To evaluate the prevalence, changing trends in antibiotic resistance and demographic profile

Type of study-retrospective study of case records of 826 children Age group - 0-18 years Place of study- Manipal hospital, Bangalore, India Study period- November 2008 to June 2016. Statistical method- Descriptive univariate analysis

Presence of clinical signs & symptoms compatible with enteric fever Isolation of S. typhi or S. paratyphi A, B, or C from blood. Diagnosis based only on clinical and serologic grounds

Blood c/s Brain heart infusion broth BacT/Alert 3D system +ve 1)gram stain 2)subculture in blood agar and Mac Conkey agar (NLF colonies) Identification- Biochemical tests (negative for Indole, Urease, Oxidase, Citrate and positive for Motility and gives an alkaline slant/acid but no gas on triple sugar iron agar) or Vitek method

Clinical laboratory standards institute reference-m100s 26th edition Tables Indicators Ampi Cotrimoxa zole Inhibition zone dia (mm) Chloram phenicol Ciproflox acin Nalidixic acid Ceftriaxo ne <=13 <=10 <=12 <=20 <=13 <=19 BSAC guidelines MIC of Azithromycin >=16mm was considered resistant (now zone dia >=12mm CLSI )

Number 100% 90% 80% 70% 60% 50% 40% 30% 20% 4 3 41 23 33 26 17 13 36 17 92 78 113 111 62 79 18 60 21 133 101 146 137 96 79 92 21 10% 0% 2008 2009 2010 2011 2012 2013 2014 2015 2016 23.7% 76.3% Salmonella paratyphi A Salmonella typhi Total

Number 160 140 120 100 80 60 40 20 0 13 6 20 51 48 52 44 41 35 20 79 70 48 9 9 5 6 4 7 Age wise distribution 75 48 51 50 10 8 0 40 3 6 6 1 01 2008 2009 2010 2011 2012 2013 2014 2015 2016 14 >=10years >=2 <10 years >=1 <2years <1year year percent <1year 2.54% >=1 -<2yrs 6.53% >=2 <10yr 52.44% >=10years 38.49%

Numbers Vaccination Status(N=826) Vaccination status 500 450 400 350 300 250 200 150 100 50 0 Typhoid Paratyphod Total Vaccinated 273 (43.3) 115 (58.6) 388 Non vaccinated 347 (56.7) 91 (41.4) 438

Sensitivity pattern Year Isolate Amp Chlor Cotri Ciplox Nalid Ceftri Azithr 2008 Typhi 16 (94%) 16 (94%) 16 (94%) 17 5 (29%) 17 17 Para 4 4 4 4 0 (0%) 4 4 2009 Typhi 88 (95.65%) 84 (91.3%) 84 (91.3%) 91 (98.9%) 9 (9.78%) 92 91 (98.9%) Para 41 41 41 41 3 (7.31%) 41 41 2010 Typhi 77 (98.71%) 77 (98.71%) 76 (97.43%) 74 (94.8%) 8 (10.25%) 78 77 (98.7%) Para 23 23 23 23 1 (4.34%) 23 23 2011 Typhi 110 (97.34%) 112 (99.11%) 112 (99.11%) 108 (95.5%) 7 (6.19%) 113 112 (99.11%) Para 33 33 33 33% 1 (3.03%) 33 33

Year Isolate Amp Chlor Cotri Ciplox Nalidi Ceftri Azithr 2012 Typhi 111 111 110 (99%) 110 (99%) 4 (3.6%) 111 111 Para 26 26 26 26 1 (3.84%) 26 26 2013 Typhi 60 59 (98.33%) 58 (96.66%) 52 (86.6%) 1 (1.66%) 60 60 Para 36 36 36 0 (0%) 1 (2.77%) 36 36 2014 Typhi 61 (93.3%) 59 (95.1%) 58 (93.5%) 55 (88.7%) 12 (19.3%) 62 62 Para 16 (94.1%) 17 17 15 (88.2%) 0 (0%) 17 17 2015 Typhi 79 79 79 74 (93.6%) 7 (8.8%) 79 79 Para 13 13 13 13 0 (0%) 13 13 2016 Typhi 18 Para 3 18 3 18 3 15 (83.3%) 3 6 (33.3%) 0 (0%) 18 3 18 3

P=0.003, ODD>25.3 6) Ampi R- 1.4% Ampi S- 98.6% P=0.002 6 Cotri R- 2.4% Cotri S- 97.6% Chloram R- 1.9% Chloram S- 98.1% P=0.006

Numbers 14 12 10 8 6 4 2 0 2008 2009 2010 2011 2012 2013 2014 2015 2016 total typhi 1 7 1 1 0 1 1 0 0 12 para 0 0 0 0 0 0 0 0 0 0 MDR MDR Typhi MDR para 12 (1.45%) 12 (1.9%) 0

<1yr >=1 <2yr >=2 <10 yrm 0 >=10yr Age % <1yr 0 >=1 <2yr 12.5 >=2 <10 yr 62.5 >=10yr 25

P=0.002 Cipro R- 5.56% Cipro I - 29.8% Cipro S- 64.64% Nalid R- 91.28% Nalid S- 8.72%

year 2008 2009 2010 2011 2012 2013 2014 2015 2016 total % azithro resist 0 1 1 1 0 0 0 0 0 3 0.36 %

Ampi Chloram Cotrimox Nalidix Ceftri Azithro MDR Ampi 1.4% Chlora m 1.9% Cotri 2.4% Nalidix 91.2% Ceftri 0% Azithro 0.36% MDR 1.45%

120.00 100.00 80.00 100.00% 99.64% 98.1% 97.6% 98.6% 60.00 40.00 Percent 20.00 0.00 0.00 0.36 1.9 2.4 1.4

PREVALENCE Prevalence of MDR typhoid is 1.45% when compared to previous study done in same geographical area, which showed resistance of 95% in the year 1991-92. MDR strains seen only among S.typhi Rise in enteric fever caused by Paratyphi A (23.7%)

ANTIBIOTIC SUSCEPTIBILITY Nalidixic acid resistance Correlation with ciprofloxacin resistance and intermediate sensitivity (high MIC) was poor. Ceftriaxone remains 100% sensitive. Azithromycin still remains a viable alternative to ceftriaxone in the treatment of most fluoroquinoloneresistant strains of S. typhi

Comparison of results Country year Serov ar No of isolates Am p Chlo Sxt Cip Nal Cef Azi MDR Kolkata 2009-2013 typhi/ para 102 (77/25) 18. 2/0 22.1/ 0 23.4/ 0 19. 5/2 0 98.7/ 96 0/0 0/28 18.2/0 India 2010-2012 Typhi/ para 266/77 13/3 10/0 5/0 35/ 49 - - - 3/0 Pakistan 2009-2011 Typhi/ para 2576/ 1726 66/ 2 67/3 67/3 0/0 - - - 66/2 Iraq 2002-2007 Egypt 2002-2007 typhi 59 88 86-17 92 0-83 typhi 654 15 15 - <1 2 0-14 Uganda 2011 typhi 18 83 83 83 0 - - - 83 Present study 2008-2016 typhi/ para 826 (630/196) 1.6/ 0.5 2.4/ 0 3.01/ 0 6.9/ 1.0 90.6/ 96.4 0/0 0.47/0 1.9/0

The incidence of MDR typhoid has drastically reduced over years The sensitivity to 1 st line drugs has come back S.typhi and S.paratyphi still remain fully sensitive to ceftriaxone and azithromycin

Ceftriaxone should be reserved for -MDR typhoid cases -non responsiveness to first line drugs Azithromycin has to be used as the last resort-as resistant strains have started to emerge Indiscriminate use of drugs leading to drug resistance has to be curbed.

It is necessary to perform regular surveys of local antibiogram patterns Reemergence of sensitivity to first line drugs is a boon to the developing countries- - cost effective - Can be given orally - Increases compliance.

Better surrogate markers like pefloxacin can be used for assessing fluroquinolones resistance* Development of bivalent and conjugate vaccines is a high priority Vaccination for children including <2 yrs has to be strengthened *Balaji Veeraraghavan et al.pefloxacin as a Surrogate Marker for Fluoroquinolone Susceptibility for Salmonella typhi: Problems and Prospects. Journal of Clinical and Diagnostic Research. 2016 Aug, Vol-10(8): DL01-DL02

LIMITATIONS OF THE STUDY Hospital based study, single centre study Correlation with clinical course and severity Genetic studies not done