LUNG CANCER. pathology & molecular biology. Izidor Kern University Clinic Golnik, Slovenia

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LUNG CANCER pathology & molecular biology Izidor Kern University Clinic Golnik, Slovenia 1

Pathology and epidemiology Small biopsy & cytology SCLC 14% NSCC NOS 4% 70% 60% 50% 63% 62% 61% 62% 59% 54% 51% metastatic 34% SCC 48% ADC 40% 30% 20% 10% 0% 24% 24% 24% 21% 15% 15% 13% 14% 11% 29% 30% 34% advanced 15% 14% limited 0% 1% 1% 0% 0% 1% 0% 2010 2011 2012 2013 2014 2015 2016 Clinical Registry UCG 2010-2016 surgery 2

Specimens TUMOR TISSUE CYTOLOGY BLOOD Small biopsy, resection FNAB, TBNA, effusion ctdna, CTC, exosome 3

Personalized medicine needs optimal tumor sample 4

Classification of lung cancer NSCC group Adenocarcinoma Squamous cell carcinoma Large cell carcinoma Adenosquamous carcinoma Sarcomatoid carcinoma Pleomorphic, spindle cell, giant cell ca L-E like carcinoma Carcinosarcoma, pulmonary blastoma Neuroendocrine tumors Carcinoid (typical, atipical) Large cell neuroendocrine carcinoma Small cell lung carcinoma Combined small cell lung carcinoma Other /rare tumors Salivary gland-type tumors Lymphomas Soft tissue tumors WHO lung tumors, 2015 5

95% of all lung tumors are carcinomas ADC SCC SCLC p40 - + - TTF1 + - + napsin A + - - CK5/6 - + - CD56 - - + 6

Adenocarcinoma Growth pattern grading 1. G1 lepidic 2. G2 acinar, papillary 3. G3 solid, micropapillary Terminal respiratory unit TTF1 positivity Preinvasive lesion & early types AAH, AIS, MIA Heterogeneity is a rule Rare types Mucinous, colloid Fetal Enteric 7

Squamous cell carcinoma No established grading system Keratinizing and nonkeratinizing Rare type Basaloid No organ specific marker but (HPV) Arise in large airways Smoking related tumor Drugable driver mutations? FGFR family PI3K/AKT 8

Routine morphology HE, MGG/Pap, mucin SCC 20-30% NSCC NOS Diagnosis (entity?) reserved for small biopsies and cytology! NSCC, favor SCC p40+ NSCC 30-50% ADC 40-50% IHC NSCC NOS < 5% NSCC, favor adenoca NSCC, favor LCNEC TTF1+ CD56+ 9

Small cell lung carcinoma Poorly differentiated neuroendocrine tumor NE markers (phenotype) NCAM (CD56) Chromogranin, synaptophysin Smoking related tumor Central airways Increased proliferation index quick doubling time 10

Lung cancer is highly mutated Aleksandrov, Nature 2013 11

60% lung adenocarcinomas have a driver oncogene - trunk mutation Mutually exclusive genetic changes: KRAS, EGFR, ALK, ROS1, BRAF, RET, HER2 Scholl, Arch Pathol Lab Med 2015 12

Predictive biomarkers: EGFR, ALK, ROS1 1. Which patients must be tested? All AdC, NSCLC NOS, carcinomas with adeno Stage IV, optional for early stages & other histologies Primary tumor or metastasis Adequate tumor sample (cytology or tissue) 2. When to test? At the time of diagnosis reflex approach Tumor sample prioritized for testing 3. How rapid should be testing? <10 working days Sample should be sent <3working days for testing Testing result incorporated in pathology report 4. EQA is a must CAP guidelines 2018 13

EGFR ErbB transmembrane growth factor receptor Sensitizing and resistance mutations Best predictor of TKI treatment 14

EGFR resistance T790M must testing at time of disease progression To select patients for targeted therapy Liquid biopsy is the first step 15

Liquid biopsy 1. Minimally invasive procedure Enables serial EGFR testing 2. Baseline EGFR testing No tumor tissue available for molecular analysis May capture tumor heterogeneity 3. Monitoring and prediction of TKI treatment 4. Detection of resistance EGFR mutation before clinical progression 16

Liquid biopsy tumor biopsy Sacher, JTO 2017 17

ALK Transmembrane insulin receptor Tyrosine kinase Normally expressed in nervous tissue, testis Several fusion partners Younger patients, nonsmokers IHC or FISH IHC+/FISH- respond to crizotinib Testing for resistance not recommended 18

ALK resistance Doebele, CCR 2012 Gainor, Cancer Discov 201619

ROS1 Insulin receptor family Tyrosine kinase 6q22 translocation FISH>>IHC IHC screening method Younger patients, nonsmokers 20

Other predicitve biomarkers KRAS No targeted therapy yet The most common driver mutation in lung adenocarcinoma Mucinous adenocarcinomas RET Gene rearrangement 10q11.2 Younger nonsmokers, poorly differentiated adenoca MET Tyrosine kinase receptor, crizotinib Overexpression, gene amplification, exon 14 skipping mutation EGFR-TKI resistance mechanism Sarcomatoid carcinoma BRAF V600E mutation in 50% Micropapillary morphology HER2 Exon 20 mutations Younger non-smokers EGFR-TKI resistance mechanism (mutations and or amplification) 21 Multigene panel testing - NGS

SCLC genomic aberrations Chromosome instability is high Increased telomerase activity TP53 and RB1 mutations are common and typical DLL3 abnormal expression predictive biomarker? DLL3 inhibits NOTCH1 in GA 22

SCLC DLL3 Notch receptor ligand family Overexpression in 80% of SCLC - cell membrane protein (IHC) Inovative targeted therapy (conjugate of anti-dll3 mab and toxic drug) Rudin, Lancet Oncol 2017 PCP 2018, Mikulov 23

PD-L1 PD-1 (programmed cell death) co-inhibitory receptor expressed on lymphoid and other cells Negatively regulates T-cell response PDL-1 major PD-1 ligand expressed on tumour cells Immunotherapy to unmask tumor 24

PD-L1 Reliable biomarker? Enrichment biomarker Dynamic and inducible expression Biopsy size, cytology Clones, platforms, cut-offs Interobserver concordance Harmonization studies Rimm, JAMA 2017 Gaule, JAMA Oncology 2017

Recommended readings Updated Molecular Testing Guideline for the Selection of Lung Cancer Patients for Treatment With Targeted Tyrosine Kinase Inhibitors Guideline From the College of American Pathologists, the International Association for the Study of Lung Cancer, and the Association for Molecular Pathology 26