Clinical Trials. Phase II Studies. Connective Tissue Oncology Society. Jon Trent, MD, PhD

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Clinical Trials Phase II Studies Jon Trent, MD, PhD Associate Professor Dept. of Sarcoma Medical Oncology The University of Texas, M. D. Anderson Cancer Center Connective Tissue Oncology Society

GIST Overview GIST have an incidence of 3-6,0003 annually and a prevalence of ~40,000 individuals 0.2% of all GI tumors, but 80% of GI sarcomas Highest incidence in the 40-60 year age group Similar male/female incidence Clinical presentation is variable Pain, hemorrhage, anemia, anorexia, nausea, perforation May be asymptomatic Miettinen M et al. Virchows Arch. 2001;438:1-12. Fletcher CDM et al. Hum Pathol. 2002;33:459-465. Nilsson B et al. Cancer. 2005;103:821-829

GIST Overview GIST may occur anywhere along the GI tract or elsewhere in the abdomen or retroperitoneum Colon/Rectum (5%) Esophagus (2%) Other (mesentery, retroperitoneum) 8% 60% Stomach Corless et al. J Clin Oncol. 2004;22:3813. 25% Small intestine Major sites of GIST metastases Liver Peritoneum Bone Lung

GIST Chemotherapy Trials Number of Partial Response Regimen Patients n (%) DOX + DTIC 43 3 (7%) DOX + DTIC +/ IF 60 10 (15%) IF + VP-16 10 0 (0%) Paclitaxel 15 1 (7%) Gemcitabine 17 0 (0%) Liposomal DOX 15 0 (0%) DOX 12 0 (0%) DOX or docetaxel 9 0 (0%) High-dose IF 26 0 (0%) EPI + IF 13 0 (0%) Various 40 4 (10%) DTIC/MMC/DOX/ CDDP/GM CSF 21 1 (5%) Temozolamide 19 0 (0%) TOTAL 280 19 (6.8%)

GIST: Therapy KIT is expressed on GIST cells Gene mutation in most cases KIT: : 80%-85% 85% PDGFRA: 5%-7% Wild Type: : 12% Gene mutation results in constitutively activated receptor tyrosine kinase activity Imatinib is effective in CML Trent JC et al. Curr Opin Oncol. 2006;18:386-395.

Marked Biologic Response Revealed by PET Scan Multiple liver and upper abdominal A marked decrease infdg uptake 18 FDG-accumulating metastases 4 weeks after starting imatinib mesylate Joensuu H et al.n Engl J Med.2001;344:1052-1056.

Kit Receptor Structure Extracellular Domain (exon 9, 10.2%) Juxtamembrane Domain (exon 11, 66.1%) ATP Tyrosine Kinase Domain I (exon 13/14, 1.2%) Tyrosine Kinase Domain II (exon 17, 0.6%) = common mutation site

Kit Receptor Phenotype ADP + P ATP Proliferation Survival Adhesion Invasion Metastasis Angiogenesis

Imatinib Mesylate N NH NH N N Formula: C 30 H 35 N 7 SO 4 N O MW: 589.7 CH 3 SO 3 H N Rational drug design 2-phenylamino pyrimidine Based on structure of ATP binding site Highly water soluble Oral bioavailability Inhibitor of selective tyrosine kinases bcr-abl PDGF-R c-kit Potent (IC 50 0.1 M)

Kit Receptor Phenotype Imatinib ATP Proliferation Survival Adhesion Invasion Metastasis Angiogenesis = imanitib contact point

Low KIT Expression Correlates With Benefit From Imatinib Chirieac, Trent. Cancer 2006

Apoptosis After Imatinib (5 DAYS) Baseline 5 days post-imatinib

Familial GIST I II III IV I I II III IV III II V VII VI I II VIII III IV Kleinbaum et al, ASCO 2006

Progression-free Survival By Imatinib Dose Kit Exon 9 Mutation Debiec-Rhycter et al, 2007

A Clinical Trial is a Scientific Study in Humans

A Clinical Trial Must Be Ethically and Scientifically Sound

A Clinical Trial Should Be Ethically and Scientifically Sound, While Providing a Therapeutic Option For Patients

Clinical Trial Elements Objectives Background Patient Eligibility Pretreatment Evaluation Treatment Plan Evaluation During and after Treatment Criteria for Response Criteria for Removal from Study Laboratory Correlates Statistical Considerations Informed Consent

What Are The Objectives of The Clinical Trial?

Phase I To determine maximum tolerated dose To assess safety To assess efficacy Phase II Objectives To assess efficacy To assess safety Laboratory Correlates Phase III To assess small differences in efficacy between to therapies (drug, dose, formulation, BSC)

Background Provide an overview of the disease and the drug. Why are the objectives important? How will this improve patient care? What are the risks and benefits to the patients?

Phase II Study Design Patient population Selection of agent(s) Dose Definition of endpoints Statistical design

Eligibility Criteria Selection of Patients Patient population Type of cancer Prior therapy Stage of disease Presence of drug target

Eligibility Criteria Selection of Patients Select patients who have progressing disease Should not be overly strict on exclusion criteria Prior therapy Prior cancer history

Selection of Study Drug Phase II studies in advanced GIST (AKT/MapK/p21 inhibitor)+imatinib Perifosine Tasigna: HSP90 Kit and Abl inhibitor inhibitor vs. Placebo (randomized)

BFR14 3-yr randomization Progression Free Survival 1.0 Probability 0.9 0.8 CONT group 0.7 3 events / 25 patients 1-year PFS: 87.7% (CI95 = 71.6-100.0) 0.6 0.5 0.4 STOP group 0.3 17 events / 25 patients 0.2 0.1 1-year PFS: 25.2% (CI95 = 6.3-44.0) 0.0 Months 0 3 6 Rate of PD in STOP group 9 12 15 at 6 months: at 9 months: at 1 year: 18 21 40% 55% 75% 24 27 30 Median f.u.: 11 m Updated ECCO 14 (IC95:sept 4.8 07, 13.8) Log-rank test : p <.0001

Imatinib 400mg vs 800mg Time to Progression on Crossover

Clinical Trial Evaluations Measuring Efficacy Pre-treatment Baseline measurement During Treatment Response assesment (same method as baseline) Survival Post-treatment on study until event

Phase II Study Design Endpoints Response rate Time to progression Progression Free Survival Overall Survival Improved Quality of Life

Phase II Study Design Definition Clinical of response Radiographic Histological Molecular Improved Quality of Life

CT Scan Results Jun 27, 2000 Before Imatinib Oct 4, 2000 After Imatinib

Response Pre-Imatinib Post-Imatinib (8 weeks therapy)

Effects of Imatinib on GIST: CT and PET findings 1/18 3/23 1/26 10/9 10/8

Effect of Imatinib on Vascularity Pre-Imatinib Post-Imatinib Perfusion Parameter Pre-Imatinib Post-Imatinib P Value BF (ml/100g/min) 36.84 24.55 0.017 BV (ml) 3.90 2.84 0.005 MTT (s) 9.47 9.96 0.26

Study Design

Statistical Considerations Number of patients Rate of accrual Power Significance What can you demonstrate?

Statistical Considerations Allow quantitation of objectives Require clinical considerations When done properly ensure a safe, ethical, and successful study

Phase II Study Design Statistical design 1-stage design 2-stage designs Newer Bayesian approaches

Clinical Trials Clinically Sound: Ensure the Best Patient Care Scientifically rigorous Ethical Offer a therapy to patients that have no other treatment options Learn about the disease and the therapy so that the next Clinical Trial is better.

Why Participate In A Trial? No other therapeutic options are available. Therapy or testing are free. To allow researchers to understand GIST and help future patients. Freireich s Law #6: A good clinical trial offers the best patient care

Clinical Trials Jon Trent, MD, PhD jtrent@mdanderson.org Associate Professor Dept. of Sarcoma Medical Oncology The University of Texas, M. D. Anderson Cancer Center Connective Tissue Oncology Society

*What is a clinical trial, and when should a patient consider entering a trial? *What are the various phases of trials and their goals? *Who sponsors a trial and how does this affect goals? (Government, pharma, intergroup trials, etc) *What are the various surrogate endpoints in clinical trials, and what does each imply for a patient (time to progression, overall survival, time to treatment change, time to secondary resistance, etc?) *What makes a trial scientific/unbiased and how does this differ from voluntary internet polls about pt results? *How does a patient find a trial? Who pays for trial participation? *What are some key areas of investigational drugs for GIST pts and why are these important? (HSP90i, HDACi, PI3Ki, other KIT inhibitors, non-atp competitive KIT inhibitors, antibodies, etc)

Eligibility Criteria Selection of Patients Imatinib in Sarcomas Response Rate: 10% Imatinib in Kit + GIST Response Rate: 85%

Eligibility Criteria Selection of Patients Select Patients whose tumor expresses the target Don t Select Patients whose tumor expresses the target

Phase III Trial of Sunitinib Time to Progression 100 % of patients 80 Sunitinib TTP= 6.3 months (n=207) 60 40 Placebo (discontinuation) TTP= 1.5 months (n=105) 20 0 0 3 6 Months 9 Demetri et al. J Clin Oncol. 2005;23(Suppl 16):308s. Abstract 4000. Updated from oral presentation. 12 Hazard ratio=0.335 P<0.00001

EORTC 1st Line Chemotherapy: Active Single Agents or Combinations Van Glabbeke, ASCO 2001

Probability of Event Temozolamide in GIST Overall Survival 1.0 1.0.9.9.8.8.7.7.6.6.5.5.4.4.3.3.2.2.1.1 0 0 0 2 4 6 8 10 12 Time To Progression (months) TTP 2 months 14 16 0 4 8 12 16 20 24 28 32 Overall Survival (months) OS (28 months) Trent et al, Cancer 2003

Biological Endpoints Phase II trial to understand the biology of response to therapy

Mechanisms of Activity of Imatinib in GIST Baseline 8 weeks of imatinib

Mechanisms of Activity of Imatinib in GIST Baseline 4 weeks of imatinib

Mechanisms of Activity of Imatinib in GIST Cohort 1 Imatinib for 3 days Cohort 2 Imatinib for 5 days Imatinib Therapy -Pathology evaluations -Bank excess tumor for molecular studies -Imatinib for 2 years Cohort 3 Imatinib for 7 days Pre-imatinib Studies -Perfusion CT Scan -PET scan -Serum collection -Biopsy Post-imatinib (preoperative) Studies -Perfusion CT Scan -PET scan -Serum collection Surgical Resection

Early Mechanisms of Activity of Imatinib in GIST Apoptosis pathway interrogation Anti-Vascular pathway interrogation Genomic pathway analysis (Gene Ontology) Proteomic analysis of tissue protein changes (RPPA) microrna modulation of genomic changes Methylation changes after imatinib therapy