For the rapid, sensitive and accurate measurement of Sucrose levels in various samples

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Transcription:

ab83387 Sucrose Assay Kit Instructions for Use For the rapid, sensitive and accurate measurement of Sucrose levels in various samples This product is for research use only and is not intended for diagnostic use.

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Table of Contents 1. Overview 3 2. Protocol Summary 4 3. Components and Storage 5 4. Assay Protocol 7 5. Data Analysis 9 6. Troubleshooting 11 2

1. Overview Sucrose (C 12 H 22 O 11 ; FW:342.3), also called table sugar, is one of the most important fuel sources to generate the universal energy molecule ATP. Sucrose is a disaccharide which can be converted into one glucose and one fructose. Abcam s Sucrose Assay Kit provides a convenient means for specifically measuring sucrose levels from various biological samples (e.g. serum, plasma, body fluids, food, growth medium, etc.). Sucrose is converted to glucose and fructose by invertase. The generated glucose is then specifically oxidized to generate a product which reacts with a probe to generate color (λ= 570 nm) and fluorescence (Ex/Em = 535/587 nm). Use of proper controls allows for correcting free glucose background. Other disaccharides such as lactose and maltose do not interfere with the assay. The method can detect 0.0002-10 mm sucrose concentrations. 3

2. Protocol Summary Sample Preparation Standard Curve Preparation Convert Sucrose Glucose Prepare and Add Reaction Mix Measure Optical Density or Fluorescence 4

3. Components and Storage A. Kit Components Item Quantity Sucrose Assay Buffer 25 ml OxiRed Probe (in DMSO) 0.2 ml Invertase (Lyophilized) 1 vial Enzyme Mix (Lyophilized) 1 vial Sucrose Standard (100 nmol/µl) 100 µl * Store kit at -20 C, protect from light. Allow buffers to warm to room temperature before use. Briefly centrifuge all small vials prior to opening. Keep enzymes on ice. Read the entire protocol before performing the assay. OXIRED PROBE: Ready to use as supplied. Thaw the DMSO solution by warming to room temperature before use. Store at -20 C, protect from light and moisture. Use within two months. INVERTASE AND ENZYME MIX: Dissolve in 220 µl Assay Buffer separately. Pipette up and down. Aliquot and store at -20 C. Use within two months. 5

B. Additional Materials Required Microcentrifuge Pipettes and pipette tips Fluorescent or colorimetric microplate reader 96 well plate Orbital shaker 6

4. Assay Protocol 1. Sample Preparation: Prepare samples 1~50 µl in a 96-well plate, bring volume to a total of 50 µl with assay buffer. Serum can be directly diluted in the Assay Buffer. For unknown samples, we suggest testing several doses to make sure the readings are within the standard curve linear range 2. Standard Curve Preparation: a. For the colorimetric assay: Dilute the Sucrose Standard solution to 1 mm (1 nmol/µl) by adding 10 µl of the 100 nmol/µl Sucrose Standard to 990 µl of Assay Buffer, mix well. Add 0, 2, 4, 6, 8, 10 µl into a series of wells. Adjust volume to 50 µl/well with Assay Buffer to generate 0, 2, 4, 6, 8, 10 nmol/well of the Sucrose Standard. b. For the fluorometric assay: Dilute 100 µl of the 1mM Sucrose Standard solution another 10 fold with 900 µl Assay Buffer to 0.1 mm and mix well. Follow the same protocol as for the colorimetric assay. The fluorometric assay is ~10-100 fold more sensitive than the colorimetric assay. 3. Sucrose Conversion: Add 2 µl of Invertase* into sample and standard wells to convert sucrose to glucose. 7

* Note: Free Glucose interferes with the sucrose assay. If glucose is in your sample, you may do a glucose background control without the invertase. In the absence of invertase, the assay detects free glucose only, not the sucrose. Therefore, the free glucose background can be subtracted from the sample reading. If the sample contains glucose, prepare two wells for each sample. To one well add 2 µl of Invertase to convert sucrose to glucose. To the other well, add 2µl of assay buffer without invertase as glucose background. 4. Reaction Mix: Mix enough reagents for the number of samples and standards to be measured. For each well, prepare a total 50 µl Reaction Mix containing: Assay Buffer 46 µl OxiRed Probe** 2 µl Enzyme Mix 2 µl Mix well. Add 50 µl of the Reaction Mix to each well containing the Sucrose Standard or test samples. Mix well. Incubate the reaction for 30 min at 37 C, protect from light. ** Note: The fluorometric assay is 10 times more sensitive than the colorimetric assay. For detecting low concentrations of sucrose, use 0.4 µl of the sucrose probe per well in order to significantly decrease the fluorescence background. You must increase the amount of buffer to compensate for the decreased probe used. 8

5. Measurement: Read OD 570nm for colorimetric assay or Ex/Em = 535/590 nm for fluorometric assay in a microplate reader. 5. Data Analysis Subtract reagent background from all sample and standard assays. Plot the standard curve. Correct background by subtracting the glucose background (without invertase) from all sample readings (with invertase). Apply sample OD to the standard curve. Sucrose concentration can then be calculated: Where: Concentration = Sa / Sv (nmol/µl or µmol/ml mm) Sa is the sucrose amount from standard curve (nmol) Sv is sample volume (µl) added to the sample wells. Sucrose Molecular Weight is 342.3 9

Sucrose Standard Curve. Different amounts of sucrose, lactose and maltose are assayed following the kit protocol. Data show that the Sucrose assay kit specifically detects sucrose, but not lactose or maltose. 10

6. Troubleshooting Problem Reason Solution Assay not working Unexpected results Assay buffer at wrong temperature Protocol step missed Plate read at incorrect wavelength Unsuitable microtiter plate for assay Measured at wrong wavelength Samples contain impeding substances Unsuitable sample type Sample readings are outside linear range Assay buffer must not be chilled - needs to be at RT Re-read and follow the protocol exactly Ensure you are using appropriate reader and filter settings (refer to datasheet) Fluorescence: Black plates (clear bottoms); Luminescence: White plates; Colorimetry: Clear plates. If critical, datasheet will indicate whether to use flat- or U-shaped wells Use appropriate reader and filter settings described in datasheet Troubleshoot and also consider deproteinizing samples Use recommended samples types as listed on the datasheet Concentrate/dilute samples to be in linear range 11

Samples with inconsistent readings Lower/ Higher readings in samples and standards Unsuitable sample type Samples prepared in the wrong buffer Samples not deproteinized (if indicated on datasheet) Cell/tissue samples not sufficiently homogenized Too many freezethaw cycles Samples contain impeding substances Samples are too old or incorrectly stored Not fully thawed kit components Out-of-date kit or incorrectly stored reagents Reagents sitting for extended periods on ice Incorrect incubation time/temperature Incorrect amounts used Refer to datasheet for details about incompatible samples Use the assay buffer provided (or refer to datasheet for instructions) Use the 10kDa spin column (ab93349) Increase sonication time/ number of strokes with the Dounce homogenizer Aliquot samples to reduce the number of freeze-thaw cycles Troubleshoot and also consider deproteinizing samples Use freshly made samples and store at recommended temperature until use Wait for components to thaw completely and gently mix prior use Always check expiry date and store kit components as recommended on the datasheet Try to prepare a fresh reaction mix prior to each use Refer to datasheet for recommended incubation time and/or temperature Check pipette is calibrated correctly (always use smallest volume pipette that can pipette entire volume) 12

Problem Reason Solution Standard curve is not linear Not fully thawed kit components Pipetting errors when setting up the standard curve Incorrect pipetting when preparing the reaction mix Air bubbles in wells Concentration of standard stock incorrect Errors in standard curve calculations Use of other reagents than those provided with the kit Wait for components to thaw completely and gently mix prior use Try not to pipette too small volumes Always prepare a master mix Air bubbles will interfere with readings; try to avoid producing air bubbles and always remove bubbles prior to reading plates Recheck datasheet for recommended concentrations of standard stocks Refer to datasheet and re-check the calculations Use fresh components from the same kit For further technical questions please do not hesitate to contact us by email (technical@abcam.com) or phone (select contact us on www.abcam.com for the phone number for your region). 13

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UK, EU and ROW Email: technical@abcam.com Tel: +44 (0)1223 696000 www.abcam.com US, Canada and Latin America Email: us.technical@abcam.com Tel: 888-77-ABCAM (22226) www.abcam.com China and Asia Pacific Email: hk.technical@abcam.com Tel: 108008523689 ( 中國聯通 ) www.abcam.cn Japan Email: technical@abcam.co.jp Tel: +81-(0)3-6231-0940 www.abcam.co.jp Copyright 2012 Abcam, All Rights Reserved. The Abcam logo is a registered trademark. 15 All information / detail is correct at time of going to print.