R. S. KERBEL*, I. CORNIL and B. KORCZAK

Size: px
Start display at page:

Download "R. S. KERBEL*, I. CORNIL and B. KORCZAK"

Transcription

1 COMMENTARY New insights into the evolutionary growth of tumors revealed by Southern gel analysis of tumors genetically tagged with plasmid or proviral DNA insertions R. S. KERBEL*, I. CORNIL and B. KORCZAK Division of Cancer and Cell Biology, Mount Sinai Hospital Research Institute, 600 University Avenue, Toronto, Ontario M5C 1X5 and Department of Medical Genetics, University of Toronto, Toronto, Ontario, Canada * Author for correspondence Introduction: the evolutionary growth of tumors and development of metastatic disease Despite the enormous efforts and advances made in understanding the biology of cancer, few significant advances have been in the cure of the disease (Bailor and Smith, 1986; Cohen and Diamond, 1986). While there are many factors involved in helping to explain the slow pace of progress in clinical treatment, two stand out: the ability of tumors to metastasize and their relative resistance to toxic agents and drugs (Nowell, 1976, 1989). Thus, when a patient first presents with a clinically detectable 'primary' tumor, e.g. a breast cancer, the individual may already have clinically occult (micrometastatic) disease in other organs, such as the bones, brain, or lungs. Successful removal of the primary tumor therefore does not necessarily mean the patient is cured. If and when the occult tumors become clinically detectable some time later, they may be impossible to remove by surgical means. As a result, other treatment protocols may then be initiated such as chemotherapy or hormonal therapy. But these too may ultimately fail, because the tumors are intrinsically resistant to these therapies, or, alternatively the tumors may initially respond because they are partially sensitive, only to reappear later in a much more resistant form. This latter process is thought to be a consequence of acquired drug resistance manifested by the outgrowth of a genetically mutant subpopulation of cells (Skipper, 1983). How and why do these processes come about? A good part of the answer lies in the evolutionary development of tumors - a process known as 'tumor progression'. It is generally acknowledged that most types of tumor, whether of human or experimental animal origin, arise from the neoplastic transformation of a single altered cell (Fialkow, 1979; Woodruff, 1988). The progenitor cell, because it possesses some kind of selective growth advantage, gives rise to a neoplastic clone that cannot be clinically detected before it reaches a mass of about 10 9 Journal of Cell Science 94, (1989) Printed in Great Britain The Company of Biologists Limited 1989 cells, or about 1 cm in diameter. As this clone expands it gives rise to genetically mutated variant subpopulations in a sequential manner; some of these subclones or subpopulations may overgrow and displace their predecessors. Others may be able to metastasize to distant organs via the body's vasculature and thereby establish secondary satellite tumor growths in certain vital organs or other sites. With respect to the process of metastasis it is often noted in the literature that the metastatically competent subclones that arise during the progressive expansion of the primary tumor mass remain there as a cryptic, minority population (see Kerbel et al. 1988, for a review). Therefore, it has been reasoned that the existence of genes whose expression (or loss of expression) influence metastatic competence, can be revealed by simply comparing 'primary' tumors with their respective distant metastases. This type of approach, however, has frequently failed to reveal such genetic differences, whereas in other cases it has (Kerbel et al. 1988). Such discrepancies could be partly resolved if it could be shown that metastatically competent variant subpopulations have a growth advantage, so that over time they come to dominate the primary tumor itself. Demonstrating this would require experimental approaches to identify and follow the fate of metastatically competent subclones during their progressive growth in vivo. In this article, we shall briefly review the development and application of such an approach and show how it can be used to study a variety of issues relevant to malignant tumor progression, cell-cell interactions, and cell lineage relationships of tumors. Genetic and biochemical markers of tumor cell clonality A variety of genetic and phenotypic markers have been used to establish the clonal nature of tumors and metastases and to study clonal evolution of tumor growth (see 381

2 Woodruff, 1988, for a review; and Fialkow, 1979; Kerbel et al. 1988). They include chromosome/cytogenetic markers, enzyme polymorphisms, immunoglobulin markers and drug-resistance markers. More recently, endogenous molecular genetic markers (Vogelstein et al. 1989; Kern et al. 1989) such as restriction fragment length polymorphisms (RFLPs) have been employed. A few years ago we (and independently, Talmadge et al. 1987) decided to apply a method that had already been used with considerable success to study cell lineage and cell fate in early and later embryonic development, in haematopoiesis, and in the nervous system (see Price, 1987, for review). The method exploits the random integration of transferred foreign DNA molecules into the genomes of recipient cells as a way of generating large numbers of cells containing unique and identifiable genetic markers, which are identified by Southern blotting. The principles involved have been explained in detail by Price (1987) and ourselves (Kerbel et al. 1988). In brief, because transfected plasmid DNA, or proviral DNA copied from the RNA of retrovirus vectors, integrates in a more or less random fashion, digestion of genomic DNA with, say, a restriction enzyme that cuts outside the integrated DNA will generate unique-sized fragments of DNA incorporating the foreign DNA and host-flanking 5' and 3' DNA in any given transfectant or infectant. This is so because the distance of the nearest upstream or downstream relevant restriction sites flanking the inserted DNA recognized by the restriction endonuclease used to digest the DNA will vary from one cell (transfectant or infectant) to another. Assuming a single copy of the plasmid or proviral DNA is inserted, each clone will contain a unique DNA marker (i.e. restriction fragment of variable length) detectable by Southern blotting using an appropriate hybridization probe. The manner in which we have exploited this to study cell lineages in tumors and the clonal evolution of tumor growth in vivo is schematically summarized in Fig. 1. A plasmid (or retroviral vector) containing a dominant selectable drug resistance marker (e.g. the neo gene) is used to transfect or infect a mouse or human tumor cell population so that a large number of independent clones is obtained. Every clone will have its own unique genetic marker, detectable by Southern blotting using, for example, the neo gene or a fragment of it, as a hybridization probe. If a large number of the clones are pooled, the DNA obtained from such a mixture will present as a faint, broad smear on a Southern blot, since no given clone will exist in a high enough proportion to enable its unique 'clonotypic' genetic signature to be seen. Suppose that such a mixture is then injected into a mouse; the relative clonal composition of primary tumors and any metastases that subsequently emerge in the animal can be determined by Southern blot analysis. For example, if the 'primary' tumor (i.e. the tumor removed from the site of injection) has been overgrown by the progeny of a small number of clones this would be easily detected. Similarly, if metastases are derived from the seeding of organs by single tumor cells, i.e. are clonal growths, as previously shown or suggested by cytogenetic analysis (Talmadge et al. 1982; Fidler and Talmadge, 1986), this could also be easily determined. Moreover, the lineage relationship of different metastases (located in the same or in different organs) to each other, or to the primary tumor, would be established (Kerbel et al. 1987; Talmadge and Zbar, 1987; Korczaketa/. 1988). So too could the relative rate and extent of clonal selection. In short, the dynamics or developmental nature of clonal evolution. As will be summarized below, we have applied this approach to study lineage and clonal evolution in a mouse mammary carcinoma (called SP1) in syngeneic CBA/j mice, and more recently, a human malignant melanoma (called MeWo) grown in nude mice. The results have revealed new and potentially important insights into tumor progression. In particular a new aspect of metastatic tumor growth 'clonal dominance' of primary tumours by metastatically competent tumor cell variants Primary Tumor TUMOR CELL POPULATION plasmid I transfection Genetic tagging by random integrations of foreign DNA retroviral vector clone I Southern analysis Southern Blot Analysis pool ( clones) Metastases Fig. 1. Schematic representation of the procedure used to study cell lineages during in vivo growth of primary tumors and metastases. A mouse or human tumor cell line is genetically tagged in vitro by random integrations of foreign DNA so that a large number of individual clones is isolated, each bearing its own unique genetic signature (which can be visualized by Southern blotting using an appropriate hybridization probe). The foreign DNA is transferred either by plasmid transfection or retrovirus vector infection. A large number of clones is then pooled, which results in the disappearance of the unique signature associated with any given clone: DNA from such a pooled population will instead present as a faint smear on the gel. The pooled population is used as an inoculum to inject syngeneic or nude mice. Some time later the primary tumors and metastases are removed and analyzed by Southern blotting for their relative clonal compositions and clonal identities. In the scheme shown here, each clone is associated with a single, unique-sized fragment capable of hybridizing with a ;;eo-specific hybridization probe. This assumes a single insertion of a single copy of the «eo-containing plasmid or proviral DNA, and that a restriction enzyme that does not cut within the foreign integrated DNA is used for digestion of genomic DNA. See text for more details. 382 R. S. Kerbel et al.

3 - has been uncovered, the implications of which are discussed herein, and elsewhere (Kerbel et al. 1989). Clonal dominance of primary tumors by metastatically competent cells: analysis using plasmid-marked tumor cells The SP1 mammary tumor does not normally metastasize from a subcutaneous implantation site (Kerbel et al. 1987). However, the process of calcium phosphatemediated transfection results in as many as % of the clones acquiring this phenotype (Kerbel et al. 1987). The metastases are normally found in the lungs. Thus when the plasmid psv2«eo is used to tag genetically SP1 cells, approximately one out of every 10 or 20 clones may be competent for metastasis. When a population of between 50 and 100 psv2«eo-transfected SP1 clones was selected in G418 and pooled, the DNA extracted from the cells was found, as expected, to present as a faint smear on Southern blotting after being probed with psvzweo (Kerbel et al. 1987). This cell mixture was injected into syngeneic CBA/j mice and the primary tumors were removed about 6-7 weeks later along with solitary lung metastases from each animal. When these tumors were analyzed by Southern blotting all were found to essentially comprise the progeny of a single clone (Kerbel et al. 1987); moreover, the identity of the clone was the same from one animal to another, whether it was a primary tumor or a metastasis. Further analysis showed this was not due to an inability of the other injected clones to form tumors. Thus if primary tumors were removed at earlier time points, e.g. 3 weeks after injection, the tumors were found to be populated by a large number of the injected clones (Waghorne et al. 1988). But, remarkably, by 4-5 weeks after injection - just a week or two later - dominance of the tumors by the single clone (called neo5) became readily apparent (Waghorne et al. 1988). The results therefore seemed to indicate that a single clone, initially present in the mixture in a ratio as low as l/50 to 1/100 of the cells, came to dominate primary tumors in an exponential-like manner. Furthermore this clone was metastatically competent. Is this dominance a feature of other metastatic clones? Reconstitution experiments in which another genetically marked metastatically competent clone was mixed with an excess of the parental non-metastatic (and non-tagged) SP1 tumor cells showed this was the case (Waghorne et al. 1988). The degree of enrichment of such clones was calculated to be of the order of 5- to 50-fold over a 6- to 7-week period. Interestingly, this dominance was not due to inherently shorter population doubling times of metastatic cells, since their growth rates were shown to be exactly the same in vivo as the parental SP1 tumor (Waghorne et al. 1988). This implies that an interaction between a metastatic clone and a large number of nonmetastatic clones may bring about the eventual dominance of the former. This could in theory occur by release of growth factors or cell contact via gap junctions, which is something we are studying now. It is of some interest to consider that these results reflect recent interesting publications demonstrating a variety of phenotypes, for example metastasis, protease production and drug resistance, can be influenced by similar cell-cell interclonal interactions (Poste et al. 1981; Tofilon et al. 1984; Heppner, 1989; Lyons et al. 1989). Clonal interactions can also induce genomic alterations such as rearrangements or amplifications of transfected genes in tumor cell populations (Itaya et al. 1989). The application of the genetic technology described here to isolate and track the fate of large numbers of clones in vivo should help facilitate studies in the inherently complex area of investigation of 'tumor cell societies' (Heppner, 1989). The results summarized above using plasmid-transfected/marked SP1 cells show that late-stage ('advanced') primary tumors can be clonally dominated, i.e. overgrown, by metastatically competent subpopulations. Phenotypic analysis of primary human cancers, e.g. colorectal carcinomas and malignant melanomas, also suggests this type of metastatic cell dominance (see Kerbel et al. 1988, for review). This dominance effect reaffirms the notion of the metastatic cell being the 'apotheosis of cancer' (Hart et al. 1989). It also shows the results of comparative phenotypic or genotypic analyses between primary tumors and metastases can be heavily influenced when primary tumors are removed and analyzed: late-stage advanced tumors that are dominated by metastatically competent cells may appear similar or even indistinguishable from distant metastases, whereas earlier-stage primary tumors may be quite different. This simple idea could help resolve many of the discrepancies in the literature involving studies designed to uncover tumor cell features that influence metastasis. It also can explain one major source of genotypic and phenotypic variability observed when different primary tumors of similar histological origin are studied: if the phenotype or gene being studied - say, response to a particular growth factor - varies with the degree of metastatic competence, then the behaviour of a given primary tumor could clearly depend upon the extent to which it was clonally dominated by metastatically competent cells. Many studies using early versus late-stage primary malignant melanomas that vary in their competence for metastasis support this idea (Herlyn et al. 1987; Holzmann et al. 1987). Tumor cell lineage analysis using retrovirus vector-infected cell populations Virtually all studies exploiting random integration of foreign DNA to study cell lineage in normal cell systems have utilized retroviral vectors as the means of tagging cells genetically (Price, 1987). The advantages of this technology are considerable, including its very high efficiency as a method of gene transfer, relative stability of the proviral insertions, the low number (one or two) of insertions per infectant, and lack of toxicity of the infection process (Dick et al. 1986; Price, 1987). As a result, very large numbers of stably tagged cells can be obtained in a single-step selection. We have used a replication-deficient Moloney leukemia virus-based vec- Evolutionary growth of tumors 383

4 tor called AeApMoTN for our studies (Korczak et al. 1988). The retrovirus construct contained the dominant selectable neo gene enabling infectants to be isolated in medium containing the antibiotic G418. The vector was found to infect SPl cells at a frequency of about 1 in 5000 cells (Korczak et al. 1988). This enabled us to pool 104 or 10s G418-resistant SPl clones after a single infection and selection. One of the more striking findings we noted after injecting such a large mixture of marked cell clones into syngeneic CBA/J mice was the extent of clonal selection: thus the resultant tumors were found to be dominated by less than 10 clones! An example of this is shown in Fig. 2. In this experiment the SPl cells, after being tagged with the retrovirus vector, were exposed in vitro to an ionophore (A23187) or phorbol 12-myristate 13-acetate (PMA), which induced the cells to express metastatic potential (Korczak et al. 1989). It will be noted that the individual primary tumors are dominated by a small number of clones, but in this case the nature and number of the dominant clones seems to vary from one tumor to another, with some exceptions. It will also be noted that the lung metastases in a given animal are sometimes derived from one of the dominant clones present in the primary tumor obtained from the same animal (e.g. A3, PI, M2). The results are different in some respects from those described using the plasmid-transfected tumor cells described above, where the same clone always dominated every tumor analyzed. However, this may be due to the A1 kb A3 ratio of metastatic to non-metastatic cells present in the inoculum as well as to the number of clones injected. Thus, in the aforementioned (plasmid-transfection) experiments the ratio was in the range of 1/10 to 1/100, which presumably allowed dominance of the same single clone in each primary tumor. In contrast, the experiment described in the legend to Fig. 2 utilized a population of SPl cells many or most of which were competent for metastasis because of the ionophore or drug treatments. Thus the circumstances did not exist to allow dominance of the same metastatic clone in every tumor. The results also show that, whereas the primary tumors may comprise more than one dominant clone, the metastases are usually monoclonal, attesting to their clonal nature at the time of analysis and their possible origin from single tumor cells seeded into the lungs in agreement with previous results prescribed by us (Korczak et al. 1988) and other groups using cytogenetic (Talmadge et al. 1982) or isoenzyme (Oostsuyama et al. 1987) markers. It would thus appear that metastasis is nature's way of 'cloning' a tumor cell population in vivo (see Fidler and Talmadge, 1986). The 'clonal dominance' effect was recently confirmed by Thompson et al. (1989), who injected mice with mouse prostrate glandular cells that had been transformed in vitro with a retrovirus vector containing the ras and myc oncogenes. An estimated number of between 20 and 100 epithelial cells containing unique proviral integrations were injected into mice. Nevertheless, the tumors that arose were found to be P1 M2 M ft i 0 P a b Fig. 2. Analysis of cell-virus DNA junction fragments in primary tumors and individual metastases obtained from mice given an injection of a pooled mixture of 10s different G418-resistant SPl clones ('SPl-weo' clones). The tagged tumor cells were obtained by infection of the SPl mouse mammary adenocarcinoma with a retrovirus vector, AeApMoTN (Korczak et al. 1988), that contains the selectable neo gene. The pooled cells were then treated with ionophore A23187 or PMA to induce metastatic competence (Korczak et al. 1989). Individual CBA/j mice were then injected with a total of 10s cells into the subcutis. The lanes are as follows: inoculum (i); uninfected control SPl cells (0); metastases (a,b,c,d) and primary tumors (P) isolated from individual animals after injection with SPl-«eo cells were treated for 2h with 2f<M-ionophore A23187 (A1,A2,A3), 0.16,UM-PMA (PI), and both agents simultaneously (M1,M2); DNAs from individual metastases (a-d) and primary tumors were digested with BamHl, separated on 0.6% agarose gel, transferred to nitrocellulose, and probed with neo probe, as described by Korczak et al. (1989). Taken from Korczak et al. (1989). 384 R. S. Kerbel et al.

5 predominantly monoclonal, or contained only a few major clonal cell populations. Thus the authors concluded that not all the virally infected cells injected could have proliferated at the same rate (Thompson et al. 1989). Another interesting example of the clonal dominance phenomenon and clonality of metastases is shown in Fig. 3. In this experiment an amphotrophic form of the retrovirus vector used in the experiment described in Fig. 2 was employed to tag genetically a human malignant melanoma cell line called MeWo, which will readily grow and metastasize in immunosuppressed athymic nude mice (Cornil et al. 1989). Normally about cells are required to give a 100 % tumor take rate in nude mice if they are injected subcutaneously. But if the tumor cells are injected into a quasi-orthotopic site for melanocytes (which normally are found in the basal layer of the epidermis), namely just below the dermis (i.e. 'subdermally') only cells are required to achieve a 100 % take rate (Cornil et al. 1989). We asked whether the superior growth observed at the subdermal location was a consequence of a greater number of clones being able to kb in T1 M11 M12 M13 M14 T2 grow progressively in that location compared to the 'ectopic' subcutaneous site. To answer this question the MeWo line was tagged with the AeApMoTN retrovirus vector (see Fig. 3 for details) and approximately 100 independent G418-resistant clones were pooled and injected into nude mice. In some cases the cells were injected subdermally and in other cases subcutaneous injections were performed. The primary tumors were removed 4 months later, along with visible metastatic lung nodules. DNA isolated from these tumor deposits was then analyzed by Southern blotting using a ;zeo-specific hybridization probe. Several conclusions are readily apparent from Fig. 3: (1) there is evidence of clonal selection within the primary tumors, as expected, although the number of clones present is relatively high in relation to the number that were injected when compared with the mouse tumor results described above; (2) there is no obvious difference in the number of clones present in the primary tumors obtained from the subdermally injected animals when compared with the primary tumors from the subcutaneously injected animals; (3) the majority of lung metastases, M21 M22 T3 M31 M32 M33 T4 M41 M42 M Fig. 3. Human malignant melanoma (MeWo) cells were infected with a replication-defective retrovirus vector, AeApMoTN, that carries the neo gene. The viral transcnptional and regulatory sequences, namely the enhancing and promoting sequences present in the 3' LTR (long terminal repeat), were deleted, so that the possibility of activating cellular genes adjacent to the integrated provirus, and of rescuing the defective retrovirus vector by either recombination or phenotypie mixing with another retrovirus are avoided (see Korczak et al. 1988). This retroviral vector named PIR 2 5A was produced by the PA317 helper cell line and used for infecting MeWo cells. One hundred independent clones were selected in presence of the antibiotic G418 and a population of 106 cells were inoculated subdermally or subcutaneously into nude mice. Four months later the subcutaneous primary tumors (T 3 and T 4 ) and the subdermal primary tumors (T! and T 2 ) were removed, together with respective lung metastases present in the same animals (which are designated M i l, M12... and so forth). The DNA was subsequently harvested from the primary tumors and from the expanded cell cultures obtained from the individual metastases. Each DNA sample was digested with BamHl (which does not cut inside the integrated provirus) and was analyzed by Southern blotting with a 32P-labelled neo probe, in, inoculum. Evolutionary growth of tumors 385

6 once again, appear monoclonal (e.g. M13, 14, 21, 22, 31, 32, 41, 42, 43); (4) the restriction pattern of the M21, 22, 31, 32, 41, 42 and 43 metastatic nodules would suggest they are derived from a common clonotypic progenitor; moreover, this clone was a more dominant population in the primary tumors (i.e. T2, T3 and T4 of Fig. 3) from which the metastases arose. Conclusions Cell lineage analysis during the progressive growth of tumors in vivo can be readily analyzed by Southern blotting of tumors genetically marked by random integrations of foreign DNA. In this way very large number of heritable clonotypic markers can be obtained, in a single-step selection, especially when high-efficiency retrovirus vectors are used. This allows the dynamics of clonal evolution of tumors to be evaluated as well as the relative clonal composition of primary tumors and the descendent metastases. The results of our first experimental analyses using this approach have revealed some new insights into the evolutionary progression of tumors. These include: (1) the remarkable rate and degree of clonal selection that can occur in expanding primary tumor masses over a relatively short period of time, in such a way that tumors can appear monoclonal or near monoclonal even after as many as 10 s differentially marked clones are injected; (2) the fact that the dominant clones populating advanced primary tumors are often metastatically competent cell variants; (3) the finding that carcinoma metastases are usually clonal at the time of the analysis even if the primary is not, suggesting they may evolve from the seeding of organs by single clonogenic tumor cells. It is apparent that this experimental approach can be used to explore a wide spectrum of problems involving clonal evolution and natural (or induced) selection pressures operative during tumor growth in vivo or in vitro. For example, the number and nature of clones surviving to populate a tumor before and after exposure to a toxic anti-cancer therapy could be determined to evaluate relative selection pressures against the tumor cell population. Similarly, the number of clones populating tumors in normal versus immunosuppressed animals could be determined to assess the nature of host immune selection pressures on tumor growth. Clearly, much remains to be explored using this technology, which, with respect to its application to tumor biology, is still in its infancy. Nevertheless, the results already obtained demonstrate, yet again, the power of applying basic molecular genetic techniques to help study long-standing and complex problems of interest in tumor cell biology. We thank Frances Hogue and Lynda Woodcock for their excellent secretarial assistance. The work summarized or presented in this paper was supported by grants from the National Cancer Institute of Canada, the Medical Research Council of Canada and the National Institutes of Health, USA, to Robert S. Kerbel. R.S.K. is also a Terry Fox Scientist of the National Cancer Institute of Canada. References BAILOR, J. C. AND SMITH, E. M. (1986). Progress against cancer? New Engl.J. Med. 314, COHEN, M. M. AND DIAMOND, J. M. (1986). Are we losing the war on cancer? Nature, Land. 323, CORNIL, I., FERNANDEZ, B., MAN, M. S. AND KERBEL, R. S. (1989). Enhanced tumongemcity, melanogenesis, and metastasis of a human malignant melanoma observed after subdermal implantation in nude mice. J. natti. Cancer lust. 81, DICK, J. E., MAGLI, M. C, PHILLIPS, R. A. AND BERNSTEIN, A. (1986). Genetic manipulation of hematopoietic stem cells with retrovirus vectors. Trends Genet. 2, FIALKOW, P. (1979). Clonal origin of human tumors. A. Rev. Med. 30, FIDLER, I. J. AND TALMADGE, J. E. (1986). Evidence that intravenously derived pulmonary melanoma metastases can originate from the expansion of a single tumor cell. Cancer Res. 46, HART, I. R., GOODE, N. T. AND WILSON, R. E. (1989). Molecular aspects of the metastatic cascade. Bioch. biophys. Ada 989, HEPPNER, G. (1989). Tumor cell societies. J. natn. Cancer lust. 81, HERLYN, M., CLARK, W. H., RODECK, U., MANCIANTI, M. L., JAMBROSIC, J. AND KOPROWSKI, H. (1987). Biology of tumor progression in human melanocytes. Lab. Invest. 56, HOLZMANN, B., BROCKER, E. B., LEHMANN, J. M., RIOTER, D. J., SORG, C, RlETHMULLER, G. AND JOHNSON, J. (1987). Tumor progression in human malignant melanoma: five stages defined by their antigenic phenotypes. Int. J. Cancer 39, ITAYA, T., JUDDE, J.-G., HUNT, B. AND FROST, P. (1989). Genotypic and phenotypic evidence of clonal interactions in murine tumors cells. J. natn. Cancer Inst. 81, KERBEL, R. S., WAGHORNE, C, KORCZAK, C, LAGARDE, A. AND BREITMAN, M. L. (1988). Clonal dominance of primary tumors by metastatic cells: genetic analysis and biological implications. Cancer Surveys 7, KERBEL, R. S., WAGHORNE, C, MAN, S., ELLIOTT, B. E. AND BREITMAN, M. L. (1987). Alteration of the tumorigenic and metastatic properties of the neoplastic cells is associated with the process of calcium phosphate-mediated DNA transfection. Proc. natn.acad. Sci. U.SA. 84, KERN, S. E., FEARON, E. R., TERSMETTE, W. F., ENTERLINE, J. P., LEPPERT, M., NAKAMURA, Y., WHITE, R., VOGELSTEIN, B. AND HAMILTON, S. R. (1989). Allelic loss in colorectal carcinoma. J. Ain. med. Assoc. 261, KORCZAK, B., ROBSON, I. B., LAMARCHE, C, BERNSTEIN, A. AND KERBEL, R. S. (1988). Genetic tagging of tumor cells with retrovirus vectors: clonal analysis of tumor growth and metastasis in vivo. Molec. cell Biol. 8, KORCZAK, B., WHALE, C. AND KERBEL, R. S. (1989). Possible involvement of Ca 2+ mobilization and protein kinase C activation in the induction of spontaneous metastasis by mouse mammary adenocarcinoma cells. Cancer Res. 49, 2S LYONS, J. G., SIEW, K. AND O'GRADY, R. L. (1989). Cellular interactions determining the production of collagenase by a rat mammary carcinoma cell line. Int.J. Cancer 43, NOWELL, P. C. (1976). The clonal evolution of tumor cell populations. Science 194, NOWELL, P. C. (1989). Chromosomal and molecular clues to tumor progression. Semin. Oncol. 16, OOSTSUYAMA, A., TANAKA, K. AND TANOOKA, H. (1987). Evidence by cellular mosaicism for monoclonal metastasis of spontaneous mouse mammary tumors. J. natn. Cancer Inst. 78, POSTE, G., DOLL, J. AND FIDLER, I. J. (1981). Interactions among clonal subpopulations affect stability of the metastatic phenotype in polyclonal populations of B16 melanoma cells. Proc. natn. Acad. Set. U.SA. 10, PRICE, J. (1987). Retroviruses and the study of cell lineage. Development 101, SKIPPER, H. E. (1983). The forty-year old mutation theory of Luria and Delbruck and its pertinence to cancer chemotherapy. Adv. Cancer Res. 40, TALMADGE, C, TANIO, Y., MEEKER, A., TALMADGE, J. AND ZBAR, 386 R. S. Kerbel et al.

7 B. (1987). Tumor cells transfected with the neomycin resistance gene (neo) contain unique genetic markers useful for identification of tumor recurrence and metastasis. Invasion Metast. 7, TALMADGE, J. E., WOLMAN, S. R. AND FIDLER, I. J. (1982). Evidence for the clonal origin of spontaneous metastases. Science 217, TALMADGE, J. E. AND ZBAR, B. (1987). Clonality of pulmonary metastases from the bladder 6 subline of the B16 melanoma studied by Southern hybridization. J. natn. Cancer Inst. 78, THOMPSON, T. C, SOUTHGATE, J., KITCHENER, G. AND LAND, H. (1989). Multistage carcinogenesis induced by ras and myc oncogenes in a reconstituted organ. Cell 56, TOFILON, P. J., BUCKLEY, N. AND DEEN, D. F. (1984). Effect of cell-cell interactions on drug sensitivity and growth of drugsensitive and resistant tumor cells in spheroids. Science 226, WAGHORNE, C, THOMAS, M., LAGARDE, A., KERBEL, R. S. AND BREITMAN, M. L. (1988). Genetic evidence for progressive selection and overgrowth of primary tumors by metastatic cell subpopulations. Cancer Res. 48, WOODRUFF, M. F. A. (1988). Tumor clonality and its biological significance. Adv. Cancer Res. 50, VOGELSTEIN, B., FEARON, E., KERN, S. E., HAMILTON, S. R., PREISINGER, A. C, NAKAMURA, Y. AND WHITE, R. (1989). Allelotype of colorectal carcinomas. Science 244, Evolutionary growth of tumors 387

8

7.012 Quiz 3 Answers

7.012 Quiz 3 Answers MIT Biology Department 7.012: Introductory Biology - Fall 2004 Instructors: Professor Eric Lander, Professor Robert A. Weinberg, Dr. Claudette Gardel Friday 11/12/04 7.012 Quiz 3 Answers A > 85 B 72-84

More information

number Done by Corrected by Doctor Maha Shomaf

number Done by Corrected by Doctor Maha Shomaf number 19 Done by Waseem Abo-Obeida Corrected by Abdullah Zreiqat Doctor Maha Shomaf Carcinogenesis: the molecular basis of cancer. Non-lethal genetic damage lies at the heart of carcinogenesis and leads

More information

Introduction. Cancer Biology. Tumor-suppressor genes. Proto-oncogenes. DNA stability genes. Mechanisms of carcinogenesis.

Introduction. Cancer Biology. Tumor-suppressor genes. Proto-oncogenes. DNA stability genes. Mechanisms of carcinogenesis. Cancer Biology Chapter 18 Eric J. Hall., Amato Giaccia, Radiobiology for the Radiologist Introduction Tissue homeostasis depends on the regulated cell division and self-elimination (programmed cell death)

More information

CANCER. Inherited Cancer Syndromes. Affects 25% of US population. Kills 19% of US population (2nd largest killer after heart disease)

CANCER. Inherited Cancer Syndromes. Affects 25% of US population. Kills 19% of US population (2nd largest killer after heart disease) CANCER Affects 25% of US population Kills 19% of US population (2nd largest killer after heart disease) NOT one disease but 200-300 different defects Etiologic Factors In Cancer: Relative contributions

More information

Problem Set 8 Key 1 of 8

Problem Set 8 Key 1 of 8 7.06 2003 Problem Set 8 Key 1 of 8 7.06 2003 Problem Set 8 Key 1. As a bright MD/PhD, you are interested in questions about the control of cell number in the body. Recently, you've seen three patients

More information

Dr Rodney Itaki Lecturer Anatomical Pathology Discipline. University of Papua New Guinea School of Medicine & Health Sciences Division of Pathology

Dr Rodney Itaki Lecturer Anatomical Pathology Discipline. University of Papua New Guinea School of Medicine & Health Sciences Division of Pathology Neoplasia Dr Rodney Itaki Lecturer Anatomical Pathology Discipline University of Papua New Guinea School of Medicine & Health Sciences Division of Pathology General Considerations Overview: Neoplasia uncontrolled,

More information

Cancer Cell Societies and lhmor Progression

Cancer Cell Societies and lhmor Progression Cancer Cell Societies and lhmor Progression Gloria H. Heppner Breast Cancer Program, Michigan Cancer Foundation, Detroit, Michigan, USA Key Words. Tumor heterogeneity 9 Progression Cell interactions Chemotherapy

More information

Chapter 4 Cellular Oncogenes ~ 4.6 -

Chapter 4 Cellular Oncogenes ~ 4.6 - Chapter 4 Cellular Oncogenes - 4.2 ~ 4.6 - Many retroviruses carrying oncogenes have been found in chickens and mice However, attempts undertaken during the 1970s to isolate viruses from most types of

More information

Early Embryonic Development

Early Embryonic Development Early Embryonic Development Maternal effect gene products set the stage by controlling the expression of the first embryonic genes. 1. Transcription factors 2. Receptors 3. Regulatory proteins Maternal

More information

Biochemistry of Cancer and Tumor Markers

Biochemistry of Cancer and Tumor Markers Biochemistry of Cancer and Tumor Markers The term cancer applies to a group of diseases in which cells grow abnormally and form a malignant tumor. It is a long term multistage genetic process. The first

More information

- is a common disease - 1 person in 3 can expect to contract cancer at some stage in their life -1 person in 5 can expect to die from it

- is a common disease - 1 person in 3 can expect to contract cancer at some stage in their life -1 person in 5 can expect to die from it MBB157 Dr D Mangnall The Molecular Basis of Disease CANCER Lecture 1 One of the simpler (and better) definitions of cancer comes from the American Cancer Society, who define cancer as; 'Cancer is a group

More information

VIRUSES AND CANCER Michael Lea

VIRUSES AND CANCER Michael Lea VIRUSES AND CANCER 2010 Michael Lea VIRAL ONCOLOGY - LECTURE OUTLINE 1. Historical Review 2. Viruses Associated with Cancer 3. RNA Tumor Viruses 4. DNA Tumor Viruses HISTORICAL REVIEW Historical Review

More information

What causes cancer? Physical factors (radiation, ionization) Chemical factors (carcinogens) Biological factors (virus, bacteria, parasite)

What causes cancer? Physical factors (radiation, ionization) Chemical factors (carcinogens) Biological factors (virus, bacteria, parasite) Oncogenes What causes cancer? Chemical factors (carcinogens) Physical factors (radiation, ionization) Biological factors (virus, bacteria, parasite) DNA Mutation or damage Oncogenes Tumor suppressor genes

More information

Neoplasia part I. Dr. Mohsen Dashti. Clinical Medicine & Pathology nd Lecture

Neoplasia part I. Dr. Mohsen Dashti. Clinical Medicine & Pathology nd Lecture Neoplasia part I By Dr. Mohsen Dashti Clinical Medicine & Pathology 316 2 nd Lecture Lecture outline Review of structure & function. Basic definitions. Classification of neoplasms. Morphologic features.

More information

Src-INACTIVE / Src-INACTIVE

Src-INACTIVE / Src-INACTIVE Biology 169 -- Exam 1 February 2003 Answer each question, noting carefully the instructions for each. Repeat- Read the instructions for each question before answering!!! Be as specific as possible in each

More information

BIT 120. Copy of Cancer/HIV Lecture

BIT 120. Copy of Cancer/HIV Lecture BIT 120 Copy of Cancer/HIV Lecture Cancer DEFINITION Any abnormal growth of cells that has malignant potential i.e.. Leukemia Uncontrolled mitosis in WBC Genetic disease caused by an accumulation of mutations

More information

Activation of cellular proto-oncogenes to oncogenes. How was active Ras identified?

Activation of cellular proto-oncogenes to oncogenes. How was active Ras identified? Dominant Acting Oncogenes Eugene E. Marcantonio, M.D. Ph.D. Oncogenes are altered forms of normal cellular genes called proto-oncogenes that are involved in pathways regulating cell growth, differentiation,

More information

Asingle inherited mutant gene may be enough to

Asingle inherited mutant gene may be enough to 396 Cancer Inheritance STEVEN A. FRANK Asingle inherited mutant gene may be enough to cause a very high cancer risk. Single-mutation cases have provided much insight into the genetic basis of carcinogenesis,

More information

Cancer and Oncogenes Bioscience in the 21 st Century. Linda Lowe-Krentz October 11, 2013

Cancer and Oncogenes Bioscience in the 21 st Century. Linda Lowe-Krentz October 11, 2013 Cancer and Oncogenes Bioscience in the 21 st Century Linda Lowe-Krentz October 11, 2013 Just a Few Numbers Becoming Cancer Genetic Defects Drugs Our friends and family 200 180 160 140 120 100 80 60 40

More information

Lecture 1: Carcinogenesis

Lecture 1: Carcinogenesis Lecture 1: Carcinogenesis Anti-cancer (oncology agents): These are perhaps the most dangerous of drugs, other than the narcotic analgesics. This is due to their toxicities. Killing or inhibiting cancer

More information

Quantification of early stage lesions for loss of p53 should be shown in the main figures.

Quantification of early stage lesions for loss of p53 should be shown in the main figures. Reviewer #1 (Remarks to the Author): Expert in prostate cancer The manuscript "Clonal dynamics following p53 loss of heterozygosity in Kras-driven cancers" uses a number of novel genetically engineered

More information

oncogenes-and- tumour-suppressor-genes)

oncogenes-and- tumour-suppressor-genes) Special topics in tumor biochemistry oncogenes-and- tumour-suppressor-genes) Speaker: Prof. Jiunn-Jye Chuu E-Mail: jjchuu@mail.stust.edu.tw Genetic Basis of Cancer Cancer-causing mutations Disease of aging

More information

1. Basic principles 2. 6 hallmark features 3. Abnormal cell proliferation: mechanisms 4. Carcinogens: examples. Major Principles:

1. Basic principles 2. 6 hallmark features 3. Abnormal cell proliferation: mechanisms 4. Carcinogens: examples. Major Principles: Carcinogenesis 1. Basic principles 2. 6 hallmark features 3. Abnormal cell proliferation: mechanisms 4. Carcinogens: examples Carcinogenesis Major Principles: 1. Nonlethal genetic damage is central to

More information

PREPARED FOR: U.S. Army Medical Research and Materiel Command Fort Detrick, Maryland

PREPARED FOR: U.S. Army Medical Research and Materiel Command Fort Detrick, Maryland AD Award Number: W81XWH-04-1-0618 TITLE: Are Breast Tumor Stem Cells Responsible for Metastasis and Angiogenesis PRINCIPAL INVESTIGATOR: Quintin Pan, Ph.D. CONTRACTING ORGANIZATION: University of Michigan

More information

Page 32 AP Biology: 2013 Exam Review CONCEPT 6 REGULATION

Page 32 AP Biology: 2013 Exam Review CONCEPT 6 REGULATION Page 32 AP Biology: 2013 Exam Review CONCEPT 6 REGULATION 1. Feedback a. Negative feedback mechanisms maintain dynamic homeostasis for a particular condition (variable) by regulating physiological processes,

More information

Chapter 7 Conclusions

Chapter 7 Conclusions VII-1 Chapter 7 Conclusions VII-2 The development of cell-based therapies ranging from well-established practices such as bone marrow transplant to next-generation strategies such as adoptive T-cell therapy

More information

VIROLOGY. Engineering Viral Genomes: Retrovirus Vectors

VIROLOGY. Engineering Viral Genomes: Retrovirus Vectors VIROLOGY Engineering Viral Genomes: Retrovirus Vectors Viral vectors Retrovirus replicative cycle Most mammalian retroviruses use trna PRO, trna Lys3, trna Lys1,2 The partially unfolded trna is annealed

More information

7.012 Problem Set 6 Solutions

7.012 Problem Set 6 Solutions Name Section 7.012 Problem Set 6 Solutions Question 1 The viral family Orthomyxoviridae contains the influenza A, B and C viruses. These viruses have a (-)ss RNA genome surrounded by a capsid composed

More information

Computer Science, Biology, and Biomedical Informatics (CoSBBI) Outline. Molecular Biology of Cancer AND. Goals/Expectations. David Boone 7/1/2015

Computer Science, Biology, and Biomedical Informatics (CoSBBI) Outline. Molecular Biology of Cancer AND. Goals/Expectations. David Boone 7/1/2015 Goals/Expectations Computer Science, Biology, and Biomedical (CoSBBI) We want to excite you about the world of computer science, biology, and biomedical informatics. Experience what it is like to be a

More information

Metastasis progression

Metastasis progression Metastasis progression Mieloma multiplo Linear Progression Cancer cells disseminate through the organism after acquiring metastatic features inside the primary cancer Parallel progression Cancer cells

More information

Julianne Edwards. Retroviruses. Spring 2010

Julianne Edwards. Retroviruses. Spring 2010 Retroviruses Spring 2010 A retrovirus can simply be referred to as an infectious particle which replicates backwards even though there are many different types of retroviruses. More specifically, a retrovirus

More information

Cancer. Questions about cancer. What is cancer? What causes unregulated cell growth? What regulates cell growth? What causes DNA damage?

Cancer. Questions about cancer. What is cancer? What causes unregulated cell growth? What regulates cell growth? What causes DNA damage? Questions about cancer What is cancer? Cancer Gil McVean, Department of Statistics, Oxford What causes unregulated cell growth? What regulates cell growth? What causes DNA damage? What are the steps in

More information

- A cancer is an uncontrolled, independent proliferation of robust, healthy cells.

- A cancer is an uncontrolled, independent proliferation of robust, healthy cells. 1 Cancer A. What is it? - A cancer is an uncontrolled, independent proliferation of robust, healthy cells. * In some the rate is fast; in others, slow; but in all cancers the cells never stop dividing.

More information

Cancer Genetics. What is Cancer? Cancer Classification. Medical Genetics. Uncontrolled growth of cells. Not all tumors are cancerous

Cancer Genetics. What is Cancer? Cancer Classification. Medical Genetics. Uncontrolled growth of cells. Not all tumors are cancerous Session8 Medical Genetics Cancer Genetics J avad Jamshidi F a s a U n i v e r s i t y o f M e d i c a l S c i e n c e s, N o v e m b e r 2 0 1 7 What is Cancer? Uncontrolled growth of cells Not all tumors

More information

Practice Problems 8. a) What do we define as a beneficial or advantageous mutation to the virus? Why?

Practice Problems 8. a) What do we define as a beneficial or advantageous mutation to the virus? Why? Life Sciences 1a Practice Problems 8 1. You have two strains of HIV one is a wild type strain of HIV and the second has acquired a mutation in the gene encoding the protease. This mutation has a dual effect

More information

Disorders of Cell Growth & Neoplasia

Disorders of Cell Growth & Neoplasia General Pathology VPM 152 Disorders of Cell Growth & Neoplasia Lecture 3 Rate of growth, local invasion, and metastasis. Molecular basis of cancer (normal cell-cycle and cellular proliferation). Enrique

More information

Endogenous Retroviral elements in Disease: "PathoGenes" within the human genome.

Endogenous Retroviral elements in Disease: PathoGenes within the human genome. Endogenous Retroviral elements in Disease: "PathoGenes" within the human genome. H. Perron 1. Geneuro, Geneva, Switzerland 2. Geneuro-Innovation, Lyon-France 3. Université Claude Bernard, Lyon, France

More information

7.014 Problem Set 7 Solutions

7.014 Problem Set 7 Solutions MIT Department of Biology 7.014 Introductory Biology, Spring 2005 7.014 Problem Set 7 Solutions Question 1 Part A Antigen binding site Antigen binding site Variable region Light chain Light chain Variable

More information

COURSE: Medical Microbiology, PAMB 650/720 - Fall 2008 Lecture 16

COURSE: Medical Microbiology, PAMB 650/720 - Fall 2008 Lecture 16 COURSE: Medical Microbiology, PAMB 650/720 - Fall 2008 Lecture 16 Tumor Immunology M. Nagarkatti Teaching Objectives: Introduction to Cancer Immunology Know the antigens expressed by cancer cells Understand

More information

Section D: The Molecular Biology of Cancer

Section D: The Molecular Biology of Cancer CHAPTER 19 THE ORGANIZATION AND CONTROL OF EUKARYOTIC GENOMES Section D: The Molecular Biology of Cancer 1. Cancer results from genetic changes that affect the cell cycle 2. Oncogene proteins and faulty

More information

Healing After Plague: Lessons Applied. Emerging Concepts

Healing After Plague: Lessons Applied. Emerging Concepts Healing After Plague: Lessons Applied Emerging Concepts Recombination events in animal and human cells can generate families of infectious related gamma retroviruses Greatest concern is that they have

More information

Educator Navigation Guide

Educator Navigation Guide Decoding Breast Cancer Virtual Lab Educator Navigation Guide Decoding Cancer Nav Guide 2 Introduction In this virtual lab, students test tissue samples from different patients with breast cancer in order

More information

Biochemistry of Carcinogenesis. Lecture # 35 Alexander N. Koval

Biochemistry of Carcinogenesis. Lecture # 35 Alexander N. Koval Biochemistry of Carcinogenesis Lecture # 35 Alexander N. Koval What is Cancer? The term "cancer" refers to a group of diseases in which cells grow and spread unrestrained throughout the body. It is difficult

More information

Cancer and Oncogenes Bioscience in the 21 st Century. Linda Lowe-Krentz

Cancer and Oncogenes Bioscience in the 21 st Century. Linda Lowe-Krentz Cancer and Oncogenes Bioscience in the 21 st Century Linda Lowe-Krentz December 1, 2010 Just a Few Numbers Becoming Cancer Genetic Defects Drugs Our friends and family 25 More mutations as 20 you get older

More information

CHAPTER 4 RESULTS. showed that all three replicates had similar growth trends (Figure 4.1) (p<0.05; p=0.0000)

CHAPTER 4 RESULTS. showed that all three replicates had similar growth trends (Figure 4.1) (p<0.05; p=0.0000) CHAPTER 4 RESULTS 4.1 Growth Characterization of C. vulgaris 4.1.1 Optical Density Growth study of Chlorella vulgaris based on optical density at 620 nm (OD 620 ) showed that all three replicates had similar

More information

Cancer Biology: Infectious Tumour Cells

Cancer Biology: Infectious Tumour Cells Cancer Biology: Infectious Tumour Cells Citation Published Version Accessed Citable Link Terms of Use Dingli, David, and Martin A. Nowak. 2006. Cancer biology: Infectious tumour cells. Nature 443(7107):

More information

Figure S1. Generation of inducible PTEN deficient mice and the BMMCs (A) B6.129 Pten loxp/loxp mice were mated with B6.

Figure S1. Generation of inducible PTEN deficient mice and the BMMCs (A) B6.129 Pten loxp/loxp mice were mated with B6. Figure S1. Generation of inducible PTEN deficient mice and the BMMCs (A) B6.129 Pten loxp/loxp mice were mated with B6.129-Gt(ROSA)26Sor tm1(cre/ert2)tyj /J mice. To induce deletion of the Pten locus,

More information

Overview: Chapter 19 Viruses: A Borrowed Life

Overview: Chapter 19 Viruses: A Borrowed Life Overview: Chapter 19 Viruses: A Borrowed Life Viruses called bacteriophages can infect and set in motion a genetic takeover of bacteria, such as Escherichia coli Viruses lead a kind of borrowed life between

More information

This document is a required reading assignment covering chapter 4 in your textbook.

This document is a required reading assignment covering chapter 4 in your textbook. This document is a required reading assignment covering chapter 4 in your textbook. Chromosomal basis of genes and linkage The majority of chapter 4 deals with the details of mitosis and meiosis. This

More information

Frequent Segregation of More-Defective Variants from a Rous Sarcoma Virus Packaging Mutant, TK15

Frequent Segregation of More-Defective Variants from a Rous Sarcoma Virus Packaging Mutant, TK15 JOURNAL OF VIROLOGY, Oct. 1987, p. 3208-3213 0022-538X/87/103208-06$02.00/0 Copyright 1987, American Society for Microbiology Vol. 61, No. 10 Frequent Segregation of More-Defective Variants from a Rous

More information

Approved for Public Release; Distribution Unlimited

Approved for Public Release; Distribution Unlimited AD Award Number: W81XWH-04-1-0186 TITLE: A Novel Therapeutic System for the Treatment of Occult Prostate Cancer PRINCIPAL INVESTIGATOR: Shongyun Dong, M.D., Ph.D. CONTRACTING ORGANIZATION: University of

More information

CANCER 1.7 M 609,000 26% 15.5 M 73% JUST THE FACTS. More Than 1,100 Cancer Treatments in Clinical Testing Offer Hope to Patients

CANCER 1.7 M 609,000 26% 15.5 M 73% JUST THE FACTS. More Than 1,100 Cancer Treatments in Clinical Testing Offer Hope to Patients CANCER MEDICINES IN DEVELOPMENT 2018 REPORT JUST THE FACTS MORE THAN 1.7 M ESTIMATED NEW CASES OF CANCER IN 2018 IN THE UNITED STATES MORE THAN 609,000 U.S. CANCER DEATHS ARE EXPECTED IN 2018 SINCE PEAKING

More information

Chapter 9, Part 1: Biology of Cancer and Tumor Spread

Chapter 9, Part 1: Biology of Cancer and Tumor Spread PATHOPHYSIOLOGY Name Chapter 9, Part 1: Biology of Cancer and Tumor Spread I. Cancer Characteristics and Terminology Neoplasm new growth, involves the overgrowth of tissue to form a neoplastic mass (tumor).

More information

Regarding techniques of proteomics, there is:

Regarding techniques of proteomics, there is: Molecular الحلقة biology 14 واألخيرة To put you back in the context; the discussion was about Trancriptomics (the study of transcription). The following topic will be PROTEOMICS, which is the study of

More information

Overview of the core ideas in cancer research

Overview of the core ideas in cancer research Overview of the core ideas in cancer research Paul Edwards Cancer Research UK Cambridge Institute and Department of Pathology, University of Cambridge This lecture Overview of the ideas that provide the

More information

RAS Genes. The ras superfamily of genes encodes small GTP binding proteins that are responsible for the regulation of many cellular processes.

RAS Genes. The ras superfamily of genes encodes small GTP binding proteins that are responsible for the regulation of many cellular processes. ۱ RAS Genes The ras superfamily of genes encodes small GTP binding proteins that are responsible for the regulation of many cellular processes. Oncogenic ras genes in human cells include H ras, N ras,

More information

Section 9. Junaid Malek, M.D.

Section 9. Junaid Malek, M.D. Section 9 Junaid Malek, M.D. Mutation Objective: Understand how mutations can arise, and how beneficial ones can alter populations Mutation= a randomly produced, heritable change in the nucleotide sequence

More information

LESSON 4.4 WORKBOOK. How viruses make us sick: Viral Replication

LESSON 4.4 WORKBOOK. How viruses make us sick: Viral Replication DEFINITIONS OF TERMS Eukaryotic: Non-bacterial cell type (bacteria are prokaryotes).. LESSON 4.4 WORKBOOK How viruses make us sick: Viral Replication This lesson extends the principles we learned in Unit

More information

Introduction retroposon

Introduction retroposon 17.1 - Introduction A retrovirus is an RNA virus able to convert its sequence into DNA by reverse transcription A retroposon (retrotransposon) is a transposon that mobilizes via an RNA form; the DNA element

More information

Multistep nature of cancer development. Cancer genes

Multistep nature of cancer development. Cancer genes Multistep nature of cancer development Phenotypic progression loss of control over cell growth/death (neoplasm) invasiveness (carcinoma) distal spread (metastatic tumor) Genetic progression multiple genetic

More information

Nucleic Acid Testing - Oncology. Molecular Diagnosis. Gain/Loss of Nucleic Acid. Objectives. MYCN and Neuroblastoma. Molecular Diagnosis

Nucleic Acid Testing - Oncology. Molecular Diagnosis. Gain/Loss of Nucleic Acid. Objectives. MYCN and Neuroblastoma. Molecular Diagnosis Nucleic Acid Testing - Oncology Molecular Diagnosis Nucleic acid based testing in Oncology Gross alterations in DNA content of tumors (ploidy) Gain/Loss of nucleic acids Markers of Clonality Oncogene/Tumor

More information

Melanoma Metastasis. Isaiah J. Fidler, DVM, PhD. Department of Cell Biology at the University of Texas M.D. Anderson Cancer Center, Houston, Texas

Melanoma Metastasis. Isaiah J. Fidler, DVM, PhD. Department of Cell Biology at the University of Texas M.D. Anderson Cancer Center, Houston, Texas Melanoma Metastasis Isaiah J. Fidler, DVM, PhD Department of Cell Biology at the University of Texas M.D. Anderson Cancer Center, Houston, Texas Cancer metastasis requires a series of sequential steps,

More information

Molecular Diagnosis. Nucleic acid based testing in Oncology

Molecular Diagnosis. Nucleic acid based testing in Oncology Molecular Diagnosis Nucleic acid based testing in Oncology Objectives Describe uses of NAT in Oncology Diagnosis, Prediction, monitoring. Genetics Screening, presymptomatic testing, diagnostic testing,

More information

Carcinogenesis. Carcinogenesis. 1. Basic principles 2. 6 hallmark features 3. Abnormal cell proliferation: mechanisms 4. Carcinogens: examples

Carcinogenesis. Carcinogenesis. 1. Basic principles 2. 6 hallmark features 3. Abnormal cell proliferation: mechanisms 4. Carcinogens: examples Carcinogenesis 1. Basic principles 2. 6 hallmark features 3. Abnormal cell proliferation: mechanisms 4. Carcinogens: examples Major Principles (cont d) 4. Principle targets of genetic damage: 4 classes

More information

Part I. An Introduction to Cancer

Part I. An Introduction to Cancer Part I An Introduction to Cancer 2 Chapter 1 Cancer: Descriptive Overview Cancer is a disease in which cells propagate uncontrollably. These cells can come from many different parts of the body and the

More information

PREPARED FOR: U.S. Army Medical Research and Materiel Command Fort Detrick, Maryland

PREPARED FOR: U.S. Army Medical Research and Materiel Command Fort Detrick, Maryland AD Award Number: DAMD17-03-1-0392 TITLE: The Role of Notch Signaling Pathway in Breast Cancer Pathogenesis PRINCIPAL INVESTIGATOR: Annapoorni Rangarajan, Ph.D. CONTRACTING ORGANIZATION: Indian Institute

More information

BY Mrs. K.SHAILAJA., M. PHARM., LECTURER DEPT OF PHARMACY PRACTICE, SRM COLLEGE OF PHARMACY

BY Mrs. K.SHAILAJA., M. PHARM., LECTURER DEPT OF PHARMACY PRACTICE, SRM COLLEGE OF PHARMACY BY Mrs. K.SHAILAJA., M. PHARM., LECTURER DEPT OF PHARMACY PRACTICE, SRM COLLEGE OF PHARMACY Cancer is a group of more than 100 different diseases that are characterized by uncontrolled cellular growth,

More information

VIRUSES. Biology Applications Control. David R. Harper. Garland Science Taylor & Francis Group NEW YORK AND LONDON

VIRUSES. Biology Applications Control. David R. Harper. Garland Science Taylor & Francis Group NEW YORK AND LONDON VIRUSES Biology Applications Control David R. Harper GS Garland Science Taylor & Francis Group NEW YORK AND LONDON vii Chapter 1 Virus Structure and 2.2 VIRUS MORPHOLOGY 26 Infection 1 2.3 VIRAL CLASSIFICATION

More information

Stem cells: units of development and regeneration. Fernando D. Camargo Ph.D. Whitehead Fellow Whitehead Institute for Biomedical Research.

Stem cells: units of development and regeneration. Fernando D. Camargo Ph.D. Whitehead Fellow Whitehead Institute for Biomedical Research. Stem cells: units of development and regeneration Fernando D. Camargo Ph.D. Whitehead Fellow Whitehead Institute for Biomedical Research Concepts 1. Embryonic vs. adult stem cells 2. Hematopoietic stem

More information

Screening for Complex Phenotypes

Screening for Complex Phenotypes Screening for Complex Phenotypes Michael Hemann hemann@mit.edu Screening for cancer phenotypes in mice How do we typically model cancer in mice? Tumor Suppressor KO Oncogene transgenesis Problems with

More information

NAME TA. Problem sets will NOT be accepted late.

NAME TA. Problem sets will NOT be accepted late. MIT Department of Biology 7.013: Introductory Biology - Spring 2004 Instructors: Professor Hazel Sive, Professor Tyler Jacks, Dr. Claudette Gardel NAME TA 7.013 Problem Set 7 FRIDAY April 16 th 2004 Problem

More information

BIOL2005 WORKSHEET 2008

BIOL2005 WORKSHEET 2008 BIOL2005 WORKSHEET 2008 Answer all 6 questions in the space provided using additional sheets where necessary. Hand your completed answers in to the Biology office by 3 p.m. Friday 8th February. 1. Your

More information

Neoplasia 2018 lecture 11. Dr H Awad FRCPath

Neoplasia 2018 lecture 11. Dr H Awad FRCPath Neoplasia 2018 lecture 11 Dr H Awad FRCPath Clinical aspects of neoplasia Tumors affect patients by: 1. their location 2. hormonal secretions 3. paraneoplastic syndromes 4. cachexia Tumor location Even

More information

Cancer and sornat ic evolution

Cancer and sornat ic evolution Chapter 1 Cancer and sornat ic evolution 1.1 What is cancer? The development and healthy life of a human being requires the cooperation of more than ten million cells for the good of the organism. This

More information

MRC-Holland MLPA. Description version 30; 06 June 2017

MRC-Holland MLPA. Description version 30; 06 June 2017 SALSA MLPA probemix P081-C1/P082-C1 NF1 P081 Lot C1-0517, C1-0114. As compared to the previous B2 version (lot B2-0813, B2-0912), 11 target probes are replaced or added, and 10 new reference probes are

More information

BIO 302: MARCH 4 & 6, 2014

BIO 302: MARCH 4 & 6, 2014 BIO 302: MARCH 4 & 6, 2014 WEEK 8 LECTURE 2: CANCER AS A COMPLEX ADAPTIVE SYSTEM Dr. George Poste Chief Scientist, Complex Adaptive Systems Initiative and Del E. Webb Chair in Health Innovation Arizona

More information

Name Section Problem Set 6

Name Section Problem Set 6 Name Section 7.012 Problem Set 6 Question 1 The viral family Orthomyxoviridae contains the influenza A, B and C viruses. These viruses have a (-)ss RNA genome surrounded by a capsid composed of lipids

More information

CONTRACTING ORGANIZATION: Mount Sinai School of Medicine New York, New York

CONTRACTING ORGANIZATION: Mount Sinai School of Medicine New York, New York AD AWARD NUMBER: W81XWH-05-1-0475 TITLE: Restoration of Epithelial Polarity in Metastatic Tumors PRINCIPAL INVESTIGATOR: Sergei Sokol, Ph.D. CONTRACTING ORGANIZATION: Mount Sinai School of Medicine New

More information

Species Tumor Type Comment for in vivo work Lead Time for in vivo studies [weeks] MB-49-luc-2 Mouse urinary bladder carcinoma C57BL/6 2

Species Tumor Type Comment for in vivo work Lead Time for in vivo studies [weeks] MB-49-luc-2 Mouse urinary bladder carcinoma C57BL/6 2 America, Hershey, PA Australia, Melbourne, VIC Europe, Munich info@vivopharm.com www.vivopharm.com Tissue Bladder Species Tumor Type Comment for in vivo work Lead Time for in vivo studies [weeks] MB-49-luc-

More information

Recombinant Protein Expression Retroviral system

Recombinant Protein Expression Retroviral system Recombinant Protein Expression Retroviral system Viruses Contains genome DNA or RNA Genome encased in a protein coat or capsid. Some viruses have membrane covering protein coat enveloped virus Ø Essential

More information

Part-4. Cell cycle regulatory protein 5 (Cdk5) A novel target of ERK in Carb induced cell death

Part-4. Cell cycle regulatory protein 5 (Cdk5) A novel target of ERK in Carb induced cell death Part-4 Cell cycle regulatory protein 5 (Cdk5) A novel target of ERK in Carb induced cell death 95 1. Introduction The process of replicating DNA and dividing cells can be described as a series of coordinated

More information

Lecture 1: Carcinogenesis

Lecture 1: Carcinogenesis Lecture 1: Carcinogenesis Anti-cancer (oncology agents): These are perhaps the most dangerous of drugs, other than the narcotic analgesics. This is due to their toxicities. Killing or inhibiting cancer

More information

Chapter 10-3 Regulating the Cell Cycle

Chapter 10-3 Regulating the Cell Cycle Chapter 10-3 Regulating the Cell Cycle Vocabulary: Cyclin Cancer Key Concepts: How is the cell cycle regulated? How are cancer cells different from other cells? I. Introduction A. An Interesting Fact About

More information

MRC-Holland MLPA. Description version 29; 31 July 2015

MRC-Holland MLPA. Description version 29; 31 July 2015 SALSA MLPA probemix P081-C1/P082-C1 NF1 P081 Lot C1-0114. As compared to the previous B2 version (lot 0813 and 0912), 11 target probes are replaced or added, and 10 new reference probes are included. P082

More information

TITLE: Investigating the Role of TBX2 in the Inhibition of Senescence in Prostate Cancer

TITLE: Investigating the Role of TBX2 in the Inhibition of Senescence in Prostate Cancer AD Award Number: W81XWH-07-1-0155 TITLE: Investigating the Role of TBX2 in the Inhibition of Senescence in Prostate Cancer PRINCIPAL INVESTIGATOR: Srinivas Nandana CONTRACTING ORGANIZATION: Vanderbilt

More information

Supplementary methods:

Supplementary methods: Supplementary methods: Primers sequences used in real-time PCR analyses: β-actin F: GACCTCTATGCCAACACAGT β-actin [11] R: AGTACTTGCGCTCAGGAGGA MMP13 F: TTCTGGTCTTCTGGCACACGCTTT MMP13 R: CCAAGCTCATGGGCAGCAACAATA

More information

LESSON 3.2 WORKBOOK. How do normal cells become cancer cells? Workbook Lesson 3.2

LESSON 3.2 WORKBOOK. How do normal cells become cancer cells? Workbook Lesson 3.2 For a complete list of defined terms, see the Glossary. Transformation the process by which a cell acquires characteristics of a tumor cell. LESSON 3.2 WORKBOOK How do normal cells become cancer cells?

More information

Clonal evolution of human cancers

Clonal evolution of human cancers Clonal evolution of human cancers -Pathology-based microdissection and genetic analysis precisely demonstrates molecular evolution of neoplastic clones- Hiroaki Fujii, MD Ageo Medical Laboratories, Yashio

More information

Studying The Role Of DNA Mismatch Repair In Brain Cancer Malignancy

Studying The Role Of DNA Mismatch Repair In Brain Cancer Malignancy Kavya Puchhalapalli CALS Honors Project Report Spring 2017 Studying The Role Of DNA Mismatch Repair In Brain Cancer Malignancy Abstract Malignant brain tumors including medulloblastomas and primitive neuroectodermal

More information

Deregulation of signal transduction and cell cycle in Cancer

Deregulation of signal transduction and cell cycle in Cancer Deregulation of signal transduction and cell cycle in Cancer Tuangporn Suthiphongchai, Ph.D. Department of Biochemistry Faculty of Science, Mahidol University Email: tuangporn.sut@mahidol.ac.th Room Pr324

More information

Effective activity of cytokine-induced killer cells against autologous metastatic melanoma including cells with stemness features

Effective activity of cytokine-induced killer cells against autologous metastatic melanoma including cells with stemness features Effective activity of cytokine-induced killer cells against autologous metastatic melanoma including cells with stemness features Loretta Gammaitoni, Lidia Giraudo, Valeria Leuci, et al. Clin Cancer Res

More information

Course Title Form Hours subject

Course Title Form Hours subject Course Title Form Hours subject Types, and structure of chromosomes L 1 Histology Karyotyping and staining of human chromosomes L 2 Histology Chromosomal anomalies L 2 Histology Sex chromosomes L 1 Histology

More information

Genetics and Genomics in Medicine Chapter 8 Questions

Genetics and Genomics in Medicine Chapter 8 Questions Genetics and Genomics in Medicine Chapter 8 Questions Linkage Analysis Question Question 8.1 Affected members of the pedigree above have an autosomal dominant disorder, and cytogenetic analyses using conventional

More information

NEOPLASIA. 3. Which of the following tumour is benign a. Chondrosarcoma b. Osteochondroma c. Chondroblastoma d. Ewing s tumour e.

NEOPLASIA. 3. Which of the following tumour is benign a. Chondrosarcoma b. Osteochondroma c. Chondroblastoma d. Ewing s tumour e. NEOPLASIA 1. malignant neoplasms a. are independent of hormonal influence b. are always composed of homogenous cell lines c. arise from differentiated cells by a process of anaplasia d. display abnormal

More information

FILE # WHAT PERCENTAGE OF PANCREATIC TUMORS ARE BENIGN

FILE # WHAT PERCENTAGE OF PANCREATIC TUMORS ARE BENIGN 14 February, 2018 FILE # WHAT PERCENTAGE OF PANCREATIC TUMORS ARE BENIGN Document Filetype: PDF 95.97 KB 0 FILE # WHAT PERCENTAGE OF PANCREATIC TUMORS ARE BENIGN What is the percentage of lung tumors being

More information

otherwise known as Cytotoxic T lymphocytes (CTLs)

otherwise known as Cytotoxic T lymphocytes (CTLs) MIT Biology Department 7.012: Introductory Biology - Fall 200 Instructors: Professor Eric Lander, Professor Robert A. Weinberg, Dr. Claudette Gardel NAME TA SEC 7.012 Problem Set 5 FRIDAY October 29, 2004

More information

(A) Cells grown in monolayer were fixed and stained for surfactant protein-c (SPC,

(A) Cells grown in monolayer were fixed and stained for surfactant protein-c (SPC, Supplemental Figure Legends Figure S1. Cell line characterization (A) Cells grown in monolayer were fixed and stained for surfactant protein-c (SPC, green) and co-stained with DAPI to visualize the nuclei.

More information

Building complexity Unit 04 Population Dynamics

Building complexity Unit 04 Population Dynamics Building complexity Unit 04 Population Dynamics HIV and humans From a single cell to a population Single Cells Population of viruses Population of humans Single Cells How matter flows from cells through

More information

Howard Temin. Predicted RSV converted its genome into DNA to become part of host chromosome; later discovered reverse transciptase.

Howard Temin. Predicted RSV converted its genome into DNA to become part of host chromosome; later discovered reverse transciptase. Howard Temin Predicted RSV converted its genome into DNA to become part of host chromosome; later discovered reverse transciptase Nobel prize 1975 Figure 3.6 The Biology of Cancer ( Garland Science 2007)

More information