The ubiquitin proteasome system: Focus on the heart

Size: px
Start display at page:

Download "The ubiquitin proteasome system: Focus on the heart"

Transcription

1 Cardiovascular Research 70 (2006) Review The ubiquitin proteasome system: Focus on the heart Oliver Zolk *, Carolus Schenke, Antonio Sarikas Abstract Institute of Experimental and Clinical Pharmacology and Toxicology, Friedrich-Alexander-University Erlangen-Nuremberg, Germany Received 29 September 2005; received in revised form 5 December 2005; accepted 28 December 2005 Available online 23 February 2006 Time for primary review 27 days Proteasomes are the main non-lysosomal multicatalytic protease complexes that are involved in the degradation of most intracellular proteins. The substrate proteins are marked by ubiquitin, which serves as a tag for their regulated proteasomal destruction. One major function of the ubiquitin proteasome system (UPS) is to prevent accumulation of non-functional, potentially toxic proteins. Moreover, it has become clear that the UPS is involved in most aspects of eukaryotic biology, such as intracellular signaling, transcriptional control, or regulation of cell death. Recent studies demonstrated that the UPS regulates receptor internalization, hypertrophic response, apoptosis, and tolerance to ischemia and reperfusion in cardiomyocytes. Since structural remodeling of the myocardium, ischemia reperfusion injury, and myocardial cell loss are important components in the genesis of progressive heart failure, these findings suggest a pathophysiological role of the UPS. This review briefly summarizes present knowledge about structure and function of the proteasome in the heart and discusses the relevance of the UPS for cardiac diseases. D 2006 European Society of Cardiology. Published by Elsevier B.V. All rights reserved. Keywords: Cardiomyopathy; Heart failure; Ischemia reperfusion; Proteasome; Proteasome inhibitor; Ubiquitin 1. Introduction In view of the intimate involvement of different types of protease in maintaining cellular structure and function, the role of proteases in the pathogenesis and progression of various cardiac diseases has become a topic of recent research. This article focuses on an important pathway for protein degradation, namely the ubiquitin proteasome system (UPS), and reviews its physiological and pathophysiological relevance in cardiac biology. * Corresponding author. Institut für Experimentelle und Klinische Pharmakologie und Toxikologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Fahrstr. 17, Erlangen, Germany. Tel.: ; fax: address: Zolk@pharmakologie.uni-erlangen.de (O. Zolk). 2. Structure and function of the ubiquitin proteasome system (UPS) Cardiac proteins are in a dynamic state of continual degradation and resynthesis. This process is highly selective, precisely regulated and pivotal for normal cellular function. Proteases are located in a number of organelles. Among these, the lysosomes and the proteasomes play important roles in the degradation of cardiac proteins. While the lysosomes degrade the majority of endocytosed (membrane) proteins, the ubiquitin proteasome system (UPS) degrades most long- and short-lived normal and abnormal intracellular proteins [1]. In fact, the bulk of proteins in mammalian cells (up to 80 90% of all intracellular proteins) are degraded via the UPS, which is hence considered to be the major pathway of intracellular protein degradation. In this pathway, which is present in both the nucleus and the cytosol, most substrates are first marked for degradation by covalent linkage to multiple ubiquitin molecules. Ubiquitin, an evolutionary highly conserved 76 amino acid protein, is covalently linked to proteins in a /$ - see front matter D 2006 European Society of Cardiology. Published by Elsevier B.V. All rights reserved. doi: /j.cardiores

2 O. Zolk et al. / Cardiovascular Research 70 (2006) multistep process (Fig. 1A) involving E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme) and E3 (ubiquitin ligase) enzymes (Tables 1 and 2). Polyubiquitin chains are assembled via an isopeptide linkage between the lysine residue of the previous ubiquitin and the C-terminal glycine residue of the subsequent Fig. 1. (A) The conjugation of ubiquitin (Ub) to substrates usually involves three steps: an initial activation step catalyzed by E1; an intermediate step in which the ubiquitin is covalently linked to a conjugating enzyme, E2; and a final step in which the ubiquitin reaches its ultimate destination of the substrate amino group. The last step is facilitated by the E3 ligase enzyme family. Some types of E3s facilitate ubiquitin conjugation to the substrate directly from E2 by acting as a bridging factor. Another type of E3 forms a ubiquitin thiol ester intermediate before the ubiquitin is transferred to the substrate. After the linkage of a polyubiquitin chain onto the protein that is to be degraded, its recognition occurs at the 19S cap of the 26S proteasome. Degradation is brought about by the proteolytic activity of a pair of three different h-subunits, h 1, h 2, and h 5, each located in the cylinder of the 20S core unit of the 26S proteasome. (B) Schematic representation of the ubiquitin-conjugation cascade. Eukaryotic cells contain one ubiquitin-activating enzyme, E1, but multiple E2s and E3s. Substrate specificity depends mainly on the identity of the E3 ligase.

3 412 O. Zolk et al. / Cardiovascular Research 70 (2006) Table 1 E1 ubiquitin-activating enzyme and E2 ubiquitin-conjugating enzymes expressed in the heart and changes in cardiac disease Expression investigated References E1 (synonyms) Ubiquitin-activating enzyme E1 (UBE1) Protein (rat heart) [72] Protein (human left ventricular myocardium): unchanged in human heart failure [34] E2 (synonyms) Ubiquitin-conjugating enzyme E2N (UBE2N) mrna (human heart) [73] Ubiquitin-conjugating enzyme E2I (UBE2I, homolog of yeast UBC9) mrna (human heart) [74] Ubiquitin-conjugating enzyme E2D 2 (homolog of S. cerevisiae UBC4/5, ubiquitin-conjugating enzyme UBCH5B, UBCH5B, UBC4) mrna (human right atrial appendages): up-regulated in patients with atrial fibrillation [75] Ubiquitin-conjugating enzyme E2G 2 (UBE2G2, homolog of S. cerevisiae UBC7) Human Ubc2 (UBE2A/UBE2B, RAD6 homolog) ubiquitin. Due to the presence of seven lysine residues in the ubiquitin molecule, different multiubiquitin chains can be formed, depending on the lysine residues used for ubiquitin ubiquitin linkage. Monoubiquitins and structurally distinct polyubiquitin chains generally signal different fates for their target proteins. For example, chains of four or more ubiquitin moieties linked via Lys48 of ubiquitin usually signal proteasome proteolysis, whereas monoubiquitin usually acts as a signal for the internalization and subsequent endosomal sorting of many cell-surface proteins [2]. The process of ubiquitination is balanced by the process of de-ubiquitination, which is mediated by a number of enzymes (Table 3). Once marked by polyubiquitin chains, proteins are rapidly degraded by the 26S proteasome, which is a 2000-kDa ATP-dependent proteolytic complex (Fig. 1A). This large structure contains the central 20S proteasome, in which proteins are cleaved, and two 19S complexes, which provide substrate specificity and regulation. A detailed discussion of the structure of the proteasome is beyond the scope of this article, and the reader is referred to earlier reviews [3]. Notably, the catalytic activities of the proteasome most likely decline during senescence. Results of studies on the effects of aging on proteasome from rat cardiac tissue demonstrate age-dependent inhibition of the catalytic activities of the enzyme [4]. This was due, in part, mrna (human heart) [76] mrna (human left ventricular myocardium): up-regulated in end-stage heart failure [30] Protein (human left ventricular myocardium): [34] up-regulated in human heart failure to an age-dependent loss in the cardiac content and changes in the subunit composition of the 20S proteasome. Moreover, the presence of inhibitory proteins within the cellular milieu that may exist at greater concentrations in myocytes from senescent animals has been suggested [4]. One major function of the UPS is to protect the cell against misfolded or damaged proteins. The folding of newly synthesized proteins to their proper conformation might often be unsuccessful. As many as 30% of the newly synthesized proteins in eukaryotes might undergo degradation within minutes of their synthesis [5] and it seems likely that many newly synthesized polypeptides are destroyed because of the inherent inefficiency of protein folding [1]. Once synthesized and properly folded, proteins are constantly exposed to highly reactive molecules and to conditions that favor denaturation, in a process that is termed protein aging. The proteasome constitutes the cell s quality control system, which continually monitors proteins for signs of misfolding, postsynthetic denaturation or chemical damage [6]. Which of the E2s and E3s are involved in this cellular quality control system, and how they recognize misfolded or aged cardiac proteins are still open questions. Although the UPS first came to light in the context of protein destruction, it is now clear that it can also carry out various tasks in the heart, controlling activities as diverse as Table 2 E3 ubiquitin ligases expressed in the heart E3 (synonyms) Type Substrates (in the heart or References non-cardiac tissues and cells) STUB1 (CHIP) Single subunit U-box E3 ErbB2, p53 [77,78] MuRF1 Single subunit RING E3 Cardiac troponin I [79] Mdm2 (p53-binding protein, oncoprotein MDM2) Single subunit RING E3 p53, h-arrestin-2, h 2 -adrenoceptor [18,80,81] Neurl2 (Ozz) VCB multiple subunit RING E3 h-catenin [82] F-box only protein 32 (MAFbx, atrogin-1) SCF multiple subunit RING E3 Calcineurin A [11,27] UBE3A (human papilloma virus E6-associated protein, E6AP) HECT domain E3 [34]

4 O. Zolk et al. / Cardiovascular Research 70 (2006) Table 3 Deubiquitinating enzymes expressed in the heart and changes in cardiac disease Enzyme (synonyms) Expression investigated References Ubiquitin C-terminal hydrolase UCHL1 (ubiquitin thiolesterase L1, mrna, protein (human left ventricular myocardium): [32] neuron cytoplasmic protein 9.5, PGP 9.5) up-regulated in human heart failure Ubiquitin-specific protease 5, USP5 (isopeptidase T) Protein (human left ventricular myocardium): up-regulated in human heart failure [34] Ubiquitin specific protease 20 (deubiquitinating enzyme 20, KIAA1003, ubiquitin thiolesterase 20, VDU2) mrna (human ventricular myocardium): up-regulated in human heart failure [31] receptor internalization, stress response and transcriptional regulation. Present knowledge about the function and role of the UPS system in the heart is summarized below. 3. Identification of UPS substrates in the heart 3.1. Structural proteins: sarcomeres and connexins Cardiac myofibrillar proteins, like all other intracellular proteins, are in a dynamic state of continual degradation and resynthesis. The balance between these opposing metabolic processes ultimately determines the number of functional contractile units within each cardiac muscle cell. Myosin heavy chains (MHCs), actin and other myofibrillar components are relatively long-lived compared with soluble cytosolic components. Nevertheless, subtle alterations in the rate of either the anabolic or catabolic process can markedly affect the myocardial mass [7]. Although alterations in myofibrillar protein degradation have been shown to contribute to cardiac growth and remodeling, surprisingly little information is available regarding the intracellular proteolytic systems that are responsible for degrading the cardiac myofibrillar proteins. Lactacystin, which is a highly specific proteasome inhibitor, was found to suppress MHC degradation effectively in cultured neonatal rat ventricular myocytes [8]. In this study, the MHC half-life markedly increased from 22 h in control cells to 43 h in cells treated with lactacystin. For other cardiac myofibrillar proteins, the role of proteasomal degradation is still unknown. Our best knowledge about the importance of the UPS in the degradation of sarcomeric (i.e. contractile) proteins comes from studies investigating the relevance of proteolytic systems for skeletal muscle wasting and atrophy (e.g., cachexia, AIDS-related wasting and disuse). Myofibrillar proteins that are predominantly degraded by the proteasome in skeletal muscle cells include troponin C, myosin lightchain-2 and myosin light-chain-3, a-actinin and tropomyosin [9,10]. The ubiquitination system, which marks substrates for degradation by the 26S proteasome, was found to be up-regulated in several forms of muscle wasting and atrophy. Increased expression of muscle-specific ubiquitin ligases (MuRF-1 and MAFbx/atrogin-1, both also expressed in the heart, see Table 2) is now known to precede the process of atrophy [11]. Although purified myosin, actin, troponin and tropomyosin were hydrolyzed rapidly by the ubiquitin proteasome pathway, these proteins were much more stable when present in myofibrils or as soluble actomyosin complexes [10]. These findings provide evidence that the specific associations between these proteins in the contractile apparatus protect them from degradation. Thus, the ratelimiting step in their degradation seems to be the dissociation from the contractile filaments. Experimental studies suggest that at least actin and myosin are released from the sarcomere by a calcium calpain-dependent mechanism before ubiquitination [12]. Other cardiac proteins thought to be degraded by the UPS include connexins. Connexins are constituents of cardiac gap junctions, which are important for electrical activation of the heart by current transfer from one cell to another. One of the most unusual aspects of gap-junction assembly is the exceptional metabolic lability of connexins. As assessed from the degradation rate of total cell-surface biotinylated proteins, the half-life of the great majority of plasma-membrane proteins exceeds 24 h [13]. By contrast, pulse-chase analysis has demonstrated that connexin family members, including those expressed in the heart e.g., connexin 43 (Cx43), Cx45 and Cx37 turn over with a half-life of only h, even after incorporation into gapjunctional plaques [14]. To date, two proteolytic pathways, the lysosomes and the proteasomes, have been implicated in connexin turnover in intact cells (Fig. 2). Chemical inhibitors of either pathway decreased the rate of turnover of Cx43, which is the principal gap-junction protein found in the ventricular myocardium [14,15]. However, our knowledge of the molecular mechanisms underlying the proteasome-dependent degradation of gap junctions is fragmentary. It has been reported that Cx43 is ubiquitinated at the plasma membrane following mitogen-activated protein kinase (MAPK)- and protein kinase C (PKC)- dependent hyperphosphorylation [16,17]. Interestingly, Cx43 is modified by multiple monoubiquitin residues rather than a polyubiquitin chain [16]. Moreover, recent studies indicate that the ubiquitination of Cx43 occurs prior to its internalization via a clathrin-dependent mechanism [17]. Thus, the monoubiquitination of Cx43 might be a signal for recruiting clathrin to the gap-junction plaque. It has been speculated that the monoubiquitination of Cx43 might also play a role in targeting Cx43 to lysosomal compartments, as demonstrated for other membrane proteins [2].

5 414 O. Zolk et al. / Cardiovascular Research 70 (2006) Fig. 2. Role of the UPS in the degradation of connexins. Connexins are synthesized in the endoplasmic reticulum and are then transported through the Golgi apparatus towards the plasma membrane. They are oligomerized into connexons in the ER or in a post-er/golgi compartment. Misfolded (or inappropriately oligomerized) connexins are targeted to the proteasome by polyubiquitination. Connexons at the plasma membrane dock with connexons from the adjacent cell to form gap-junction channels, which cluster to form gap-junctional plaques. The ubiquitination of connexins at gap-junctional plaques has been proposed to induce internalization of a portion of the gap-junction plaque. Internalized gap junctions fuse with lysosomes and degradation of the connexins takes place. The exact role of the proteasomal pathway in the degradation of gap-junction plaques is not yet clear. The following alternative theories have been postulated: the proteasome pathway might act together with the lysosome in a sequential or parallel manner; an unknown short-lived protein might target the conformationally mature protein for proteasomal degradation; or the proteasome might be involved in the degradation of a protein that participates in the internalization of gap junctions Signaling molecules and transcription factors Cell-surface proteins, including receptor proteins, are generally thought to be degraded by lysosomal pathways. Nevertheless, the ubiquitination of several membrane receptors catalyzed by E3 ubiquitin ligases was observed [18]. In the case of membrane proteins, however, ubiquitination serves as a signal for the sorting and targeting of the internalized proteins to the lysosome, rather than to the proteasome. The best studied example is the h 2 -adrenergic receptor. In general, agonist-dependent phosphorylation of the h 2 -adrenoceptor leads to recruitment of the regulator protein, h-arrestin, which physically prevents the coupling of the receptor to G proteins in a process referred to as desensitization. Subsequent to desensitization, receptors are removed from the cell surface by a process of internalization via h-arrestin-dependent mechanisms. This paradigm of receptor sequestration has been extended by the observation that the h 2 -adrenoceptor protein and h-arrestin are both ubiquitinated in an agonist-dependent manner (Fig. 3) [18,19]. When further dissecting the role of h 2 - adrenoceptor ubiquitination, it became clear that it was required for proper sorting and degradation in lysosomes [18]. Mdm2 was identified to be one E3 ubiquitin ligase capable of catalyzing h 2 -adrenoceptor ubiquitination. Notably, Mdm2 physically interacts with and ubiquitinates also h-arrestin, and ubiquitination of h-arrestin turned out to be essential for receptor internalization [18]. Thus, the ubiquitination of h-arrestin and the receptor appears to serve important functions in regulating the life cycle of the h 2 -adrenoceptor. In addition to the role of the UPS for receptor regulation, there is growing evidence to indicate that ubiquitin and the proteasome are intimately involved in gene control. The two fundamental mechanisms involved are ubiquitin proteasome-mediated regulation of (a) the location and (b) the activity/abundance of the transcriptional activator. It is clear that if a transcription factor is not located in the nucleus, it cannot activate transcription. This simple mechanism of regulation is used extensively to control gene expression, and is achieved by phosphorylation, site-specific proteases and the UPS. The most straightforward example from the third category is nuclear factor (NF)-nB, which is held in the cytoplasm by interaction with the inhibitor protein InB (Fig. 4). Upon stimulation (e.g. by cytokines involved in inflammatory processes after myocardial infarction) an InB kinase (IKK) complex is activated and, in turn, phosphorylates InB proteins on specific serine residues [20]. The phosphorylation triggers the ubiquitination-dependent degradation of InB proteins by the 26S proteasome, resulting in the release of NF-nB [21]. Subsequently, NF-nB translocates into the nucleus, where it stimulates the transcription of specific target genes. NF-nB is known to be involved in inflammation. Additionally, recent evidence suggests that the activation of NF-nB plays a key role in myocyte hypertrophy [22,23]. At the same time, NF-nB

6 O. Zolk et al. / Cardiovascular Research 70 (2006) Fig. 3. Agonist-dependent phosphorylation of the h 2 -adrenoceptor leads to the recruitment of h-arrestin (h-arr), whereupon h-arrestin and the receptor are both ubiquitinated (U; ubiquitin). The receptor-h-arrestin complex is targeted to clathrin-coated pits. h-arrestin then becomes deubiquitinated, leading to its dissociation from the receptor. The ubiquitinated receptor is finally transported into the late endosomes and lysosomes to be degraded. activation in the heart has more ambivalent effects on cellular survival, as it is involved in the direct regulation of both pro- and anti-apoptotic genes [24,25]. As well as its effects on transcription-factor location, the UPS can directly influence transcription by controlling the cellular abundance of transcription factors. Indeed, the 26S proteasome has been found to be involved in the degradation of several transcriptional regulators, such as c-jun, c- Fos, p53 and Ying Yang 1 (YY1), which are involved in the hypertrophic response of the myocardium or the temporal regulation of muscle development and differentiation [3,26]. A recent study by Li et al. established a link between the UPS and cardiac hypertrophy more directly [27]. They reported that overexpression of atrogin-1 attenuates calcineurin A signaling in cardiomyocytes [27]. Atrogin-1 is a skeletal muscle- and cardiac muscle-specific component of a so-called SCF E3 ubiquitin ligase complex. Within this SCF atrogin-1 E3 ligase complex, atrogin-1 is responsible for Fig. 4. A schematic presentation of the activation of the transcription nuclear factor-nb (NF-nB). In the cytoplasm of the resting cell, the NF-nB dimer, which often consists of the subunits p50/p65, is bound to inhibitory proteins known as InB. Stimuli activating the InB kinases cause nuclear translocation of the NFnB dimer, while InB is degraded by the proteasome. In the nucleus, NF-nB binds to consensus sites in promoter/enhancer regions of the genes that it regulates and the transcription of these substances commences. Proteasome inhibitors block NF-nB transcriptional activity by preventing InB degradation (red). ICAM- 2, intercellular adhesion molecule 2; IL, interleukin; TNF, tumor necrosis factor; VCAM-1, vascular cell adhesion molecule 1.

7 416 O. Zolk et al. / Cardiovascular Research 70 (2006) substrate recognition. Atrogin-1 is capable of interacting with calcineurin A, which is ubiquitinated through the SCF atrogin-1 E3 ligase complex and thus targeted for proteasomal degradation [27]. Calcineurin A is a calciumactivated serine/threonine phosphatase that dephosphorylates and activates nuclear factor of activated T cells (NFAT) family members. First described as a regulator of immune function in T cells, calcineurin A lies downstream of G protein-coupled receptor activation in a signaling cascade that leads to cardiac hypertrophy [28]. Ubiquitination via the SCF atrogin-1 complex, therefore, represents a mechanism for regulating calcineurin A protein levels and activity in isolated cardiomyocytes, thereby attenuating hypertrophy and fetal gene expression [27]. Consistent with these in vitro observations, overexpression of atrogin-1 in transgenic mice blunted cardiac hypertrophy in response to pressure overload due to banding of the thoracic aorta [27]. Remarkably, however, transgenic overexpression of atrogin-1 resulted in ventricular dilatation and left ventricular dysfunction after 2-week aortic banding [27]. Thus, the impact of atrogin-1 as a calcineurin inhibitor on cardiac pathophysiology remains obscure. It has been hypothesized that the phenotypes of atrogin-1 transgenic mice are further modified by other substrates for the SCF atrogin-1 complex, or through other effects of atrogin-1 that are independent of its ubiquitin ligase activity [27]. Interestingly, atrogin-1 was shown to be regulated by the growth factor/akt signaling axis through direct transcriptional regulation by members of the FOXO subfamily of forkhead transcription factors [29]. These findings suggest that Akt signaling might promote cardiac hypertrophy in part by direct phosphorylation and inhibition of FOXO transcription factors, thereby reducing atrogin-1 gene expression and enhancing calcineurin signaling by inefficient SCF atrogin-1 -dependent calcineurin A ubiquitination and degradation. Atrogin-1, therefore, may constitute a link between two distinct signaling pathways of cardiac hypertrophy, namely the Akt and the calcineurin pathway. 4. Role of the UPS in cardiac diseases 4.1. Heart failure In heart failure, multiple alterations of the UPS have been described (Tables 1 and 3). Comparison of mrna expression in failing and non-failing human hearts revealed a significant down-regulation of the transcripts for some of the a and h subunits of the 20S proteasome core complex [30,31]. This was associated with an almost two-fold increase in the level of mrna expression of the ubiquitin-conjugating enzyme UBE2G2 [30]. Moreover, in failing ventricles, an up-regulation of the transcript for the deubiquitinating enzyme ubiquitin-specific protease 20 was observed [31]. Several findings support the notion that the changes described at the mrna level do indeed translate into changes at the functional level. Weekes et al. demonstrated that total ubiquitin conjugation was markedly increased in failing hearts from patients with hypertrophic and dilated cardiomyopathy, suggesting that the UPS is functionally impaired and net protein degradation is actually reduced in heart failure [32]. It has also been suggested that a disturbance in the homeostasis between protein synthesis and protein degradation results in the accumulation of modified proteins, which finally tend to form high-molecular-weight aggregates. Correspondingly, in an animal model of cardiac hypertrophy, augmented ubiquitin-positive lipofuscin deposits have been reported [33]. More recently, the hyperubiquitination of proteins and the deposition of nuclear or cytosolic ubiquitin-positive aggregates have also been observed in human dilated cardiomyopathy [34]. It might well be the case that protein aggregates in failing hearts become increasingly cross-linked and are therefore excellent substrates for the ubiquitination system, but are increasingly resistant to degradation of the proteasome. Moreover, these aggregates might be able to inhibit the proteasome, as demonstrated in several experimental studies [35,36]. Interestingly, the accumulation of protein aggregates and the inhibition of the proteasome seem to be much more dramatic in post-mitotic cells [37], suggesting that cardiac myocytes might be highly vulnerable to disturbances in the UPS. These observations support the hypothesis that the UPS might be involved in the disease etiology of heart failure Familial cardiomyopathies Recent studies suggest that alterations in the UPS might play a role in familial cardiomyopathies, namely in some cases of familial hypertrophic cardiomyopathy (FHC) and desmin-related myopathy (DRM). Despite the well-established genetic etiologies of FHC, the pathogenetic processes of these disorders are still unclear, especially in the case of cardiac myosin-binding protein C (cmybp-c)-related FHC, which accounts for a large number of the disease-causing mutations [38]. cmybp-c is an integral part of the heart muscle sarcomere. Most of the cmybp-c gene mutations result in a frameshift and are expected to lead to C-terminal truncated proteins lacking the major titin and/or myosinbinding sites [39]. At present, the most likely disease mechanism is that frameshift cmybp-cs act as null alleles leading to haploinsufficiency of cmybp-c in the sarcomere. The haploinsufficiency hypothesis was based on the observation that in cardiac tissue of patients known to be carriers of cmybp-c frameshift mutations, the expected truncated proteins were not seen in Western blots in a number of independent studies [40 42]. Using an adenovirus-based approach, a recent study analyzed the expression and localization of two different truncated cmybp-cs (M6t 3% and M7t 80% truncation, both of which mutations have been identified in FHC patients) in

8 O. Zolk et al. / Cardiovascular Research 70 (2006) neonatal rat cardiomyocytes [43]. Despite similar mrna levels, the protein expression of M6t and M7t was markedly lower than that of the wild-type cmybp-c [43]. Treatment of cardiomyocytes with the proteasome inhibitors MG132 or lactacystin markedly raised the protein concentrations of truncated cmybp-c to the level of the wild-type controls, suggesting that truncated cmybp-cs are rapidly degraded mainly by the UPS [43]. These results can be taken to explain the absence of mutated cmybp-c in cardiac tissue of patients, supporting the notion of haploinsufficiency being a trigger of disease. Of particular importance, however, was the demonstration that the truncated cmybp-cs were not only substrates of the UPS but also impaired the degrading system, as shown with a ubiquitin-ds-red (Ub G76V -DsRed) fusion protein reporter assay for proteasome activity in living cells. The mechanisms by which proteasome function is inhibited remain unclear. However, it is likely that mutant cmybp-cs provide an unusually strong degradation signal and effectively compete with other degradation-prone proteins for the proteasome (Fig. 5). Although these in vitro data have to be verified in vivo, it is tempting to speculate that the mutant cmybp-c protein imposes a continuous, lifelong additional workload on the protein-degradation machinery in the heart. The consequence might be the impaired degradation of abnormal proteins resulting from aging or oxidative stress (the accumulation of which could be toxic) and of many regulatory proteins (e.g., regulators of apoptosis) with short half-lives that determine their activities. The experimental data open the possibility that the UPS might be involved in the complex pathogenic process leading to the late-onset cardiomyopathy, which is characteristic for FHC secondary to mutations of the MYBPC3 gene [44]. Another example which demonstrates a possible role of the UPS for cardiac pathology is the familial desmin-related myopathy (DRM) caused by an R120G missense mutation of the chaperonic protein ab-crystallin. Initially discovered as a lens protein a century ago, ab-crystallin is the most abundant small heat shock protein (HSP) in the heart, where its expression is limited to the cardiomyocytes [45]. Chaperonic proteins, such as ab-crystallin, facilitate the assembly, disassembly and folding/refolding of proteins, and, therefore, play important roles in the UPS system as they triage misfolded proteins for proteasomal degradation or repair. In vitro, ab-crystallin assists the assembly of desmin filaments and modulates interaction among desmin filaments. The R120G mutation significantly reduces the chaperonic function of ab-crystallin [46]. In the presence of ab-crystallin R120G, filaments formed by desmin protein appear to be less uniform in diameter and they tend to aggregate. Indeed, in patients carrying the ab-crystallin R120G mutation, desmin-positive aggregates were found Fig. 5. Effects of mutant myosin binding protein-c (MyBP-C) on the ubiquitin proteasome system (UPS) in cardiomyocytes. Unlike wild-type (WT) MyBP-C (A), truncated MyBP-C is preferentially degraded by the UPS (B). Truncated MyBP-C has been recognized not only as a substrate of the UPS but also as an inhibitor of the breakdown of other UPS substrates [43], such as damaged or misfolded proteins. It is likely that mutant MyBP-C provides an unusually strong degradation signal and effectively competes with other degradation-prone proteins for the proteasome. Moreover, mutant MyBP-C induces aggregate formation. In these aggregates, ubiquitinated proteins (including the mutant MyBP-C) were found. These protein aggregates may directly impair the function of the proteasome.

9 418 O. Zolk et al. / Cardiovascular Research 70 (2006) [47]. These aggregates were also found to contain large amounts of the mutant ab-crystallin protein [47]. ab-crystallin was shown to interact with the F-box protein FBX4 [48], which is an important component of a SCF-type E3 ubiquitin ligase and confers the substrate specificity to the SCF complex [49]. Interaction of abcrystallin with FBX4 promotes FBX4-dependent ubiquitination of substrates. Importantly, the R120G mutation of ab-crystallin results in increased interaction with FBX4, a specific translocation of FBX4 to the detergent-insoluble fraction, ubiquitination of yet unknown proteins, and accumulation of ubiquitinated products [48]. This mechanism might contribute to ab-crystallin R120G -induced aggregate formation. The transgenic expression of ab-crystallin R120G in the mouse heart caused aberrant desmin and ab-crystallin aggregation, as well as cardiomyopathy, in a dominantnegative manner, thereby reproducing the phenotype found in patients with DRMs [50]. Further analysis of this animal model of DRM revealed that aberrant protein aggregation induced by ab-crystallin R120G impaired the proteolytic function of proteasomes in the heart [51]. The UPS impairment was detected before cardiac hypertrophy and failure became discernible [51]. This observation suggests that defective protein turnover might contribute to cardiac remodeling and failure in this model and establishes an additional pathogenic mechanism of ab-crystallin R120G - related DRM. Similar to ab-crystallin R120G, other mutant proteins known to induce aggregate formation, such as mutant huntingtin or mutant cystic fibrosis membrane conductor protein, impair the UPS [36], suggesting that the formation of intracellular protein aggregates rather than loss of function of the respective gene causes UPS malfunction. This suggestion was supported by the observation that ab-crystallin R120G - induced UPS malfunction in cultured cardiomyocytes was significantly attenuated when aberrant protein aggregation was reduced by Congo red treatment [51] Ischemia reperfusion injury of the heart Early reperfusion of the ischemic myocardium plays an important role in minimizing myocardial tissue injury associated with acute myocardial infarction. However, the effects of reperfusion are complex and include some deleterious effects collectively referred to as reperfusion injury [52]. This reperfusion injury involves the activation of an inflammatory cascade and is manifest as functional impairment, arrhythmia, and accelerated progression of cell death in certain critically injured myocytes. Experimental studies with proteasome inhibitors strongly suggest a role of proteasomes in the process of ischemia reperfusion injury. In animal models of ischemia and reperfusion, proteasome inhibition significantly reduced the infarct size, in some studies by more than 50%, and improved functional parameters such as the left ventricular developed pressure (LVDP) and the + dp/dt max [53 56]. Pharmacological blockade of the UPS seems to confer cardioprotection due to the anti-inflammatory effects of proteasome inhibitors by a mechanism involving the inhibition of NF-nB [54]. Moreover, inhibition of proteasome activity by pharmacologic treatment leads to the induction of molecular chaperones, many of which are heat HSPs, such as ab-crystallin or HSP70. HSPs protect cardiomyocytes against hypoxia, and have direct antiapoptotic activities [57,58]. Specifically, ab-crystallin inhibits apoptosis during myocardial ischemia and reperfusion [59,60] by preventing the activation of procaspase-3 [61], and its association with cytoskeletal components during stress [59,62]. A recent study focussing on the cochaperone/ubiquitin ligase CHIP (for carboxyl terminus of Hsp70 interacting protein) provides additional evidence that the molecular chaperone machinery plays an important role in protection against ischemia reperfusion injury. Mice deficient for CHIP were less tolerant against ischemia reperfusion injury with more frequent reperfusion arrhythmias and increased infarct size compared to wild-type mice [63]. CHIP, which is abundantly expressed in the heart, ubiquitinates damaged proteins and triggers their proteasome-dependent degradation in a process requiring the molecular chaperones HSP70 or HSP90, which bind to unfolded domains thereby facilitating substrate recognition by CHIP [64,65]. In addition, CHIP regulates activation of the stress-chaperone response through induced trimerization and transcriptional activation of heat shock factor 1 (HSF1) [66]. These diverse functions of CHIP may explain its protective properties against cardiac ischemia reperfusion injury. 5. Proteasome inhibition: a future therapy for cardiac diseases? During recent years, several types of low-molecular weight inhibitors of the proteasome have been identified that can readily enter cells and selectively inhibit the proteolytic function of the proteasome complex [3]. Bortezomib (Velcadei) is a novel dipeptide boronic acid that is the first proteasome inhibitor to have progressed to clinical trials. Bortezomib has now been approved by the US Food and Drug Administration (FDA) and the European Agency for the Evaluation of Medicinal Products (EMEA) for the treatment of multiple myeloma patients who have received at least two prior therapies and have demonstrated disease progression during the last treatment. Because the first proteasome inhibitors for clinical use were developed as novel antineoplastic agents, the majority of data relating to the clinical effects and side effects of proteasome inhibitors have been obtained from cancer studies. The risks that are associated with bortezomib therapy include new or worsening peripheral neuropathy,

10 O. Zolk et al. / Cardiovascular Research 70 (2006) orthostatic hypotension, gastrointestinal adverse events and thrombocytopenia. Moreover, the acute development or exacerbation of congestive heart failure has been seen in patients with risk factors for, or pre-existing, heart disease [67]. Although there seems to be some risk of cardiovascular side effects when proteasome inhibitors are applied as cancer treatment intermittently for several weeks, it has been proposed that proteasome inhibitors might have beneficial effects due to their potential anti-inflammatory properties when administered for a short time immediately after acute ischemic events, such as myocardial infarction or stroke. Proteasome inhibitors are known to act on a key intracellular mechanism, the NF-nB pathway, which controls the activation of inflammatory molecules. Based on animal studies, it has been proposed that proteasome inhibitors might have the potential to attenuate reperfusion injury and, thus, might work synergistically with current myocardial infarction reperfusion therapies [56]. Existing thrombolytic agents have a narrow window of time for therapeutic application. The hope for the future is to increase this period using proteasome inhibitors, which would expand the patient population that could receive thrombolytic therapy [68,69]. The anti-inflammatory action of proteasome inhibitors might also offer an opportunity for tolerance induction in transplant recipients. It has been demonstrated in vitro that proteasome inhibitors could suppress the proliferation and induce the apoptosis of activated T cells. This finding suggests that such inhibitors could be used as a novel category of immunosuppressants in blocking allograft rejection. Indeed, in a mouse heterotopic heart allograftrejection model, the proteasome inhibitor dipeptide boronic acid prolonged heart allograft survival from 7 to 35 days [70]. Initial reports on the effects of proteasome inhibitors indicate that proteasome inhibition might also be an effective therapeutic strategy for the reduction of restenosis after balloon angioplasty of coronary arteries and stent implantation. In a balloon-injury model of the rat carotid artery, local administration of the proteasome inhibitor MG132 effectively reduced neointima formation, which was associated with strong antiproliferative and proapoptotic effects on vascular smooth muscle cells and reduced infiltration of macrophages [71]. Although these proof-ofprinciple experiments have established novel and interesting therapeutic options for the treatment of cardiac diseases, ongoing and future clinical studies will have to confirm the experimental findings obtained with proteasome inhibitors in the clinical setting. Acknowledgement Work from the authors laboratory was supported by the Deutsche Forschungsgemeinschaft (Zo 123-1/3, GRK 750), the Fritz Thyssen Stiftung (OZ), and the Marohn-Stiftung (OZ). References [1] Goldberg AL. Protein degradation and protection against misfolded or damaged proteins. Nature 2003;426: [2] Hicke L, Dunn R. Regulation of membrane protein transport by ubiquitin and ubiquitin-binding proteins. Annu Rev Cell Dev Biol 2003;19: [3] Herrmann J, Ciechanover A, Lerman LO, Lerman A. The ubiquitin proteasome system in cardiovascular diseases a hypothesis extended. Cardiovasc Res 2004;61: [4] Bulteau AL, Szweda LI, Friguet B. Age-dependent declines in proteasome activity in the heart. Arch Biochem Biophys 2002;397: [5] Schubert U, Anton LC, Gibbs J, Norbury CC, Yewdell JW, Bennink JR. Rapid degradation of a large fraction of newly synthesized proteins by proteasomes. Nature 2000;404: [6] Tarcsa E, Szymanska G, Lecker S, O Connor CM, Goldberg AL. Ca 2+ -free calmodulin and calmodulin damaged by in vitro aging are selectively degraded by 26S proteasomes without ubiquitination. J Biol Chem 2000;275: [7] Samarel AM. Hemodynamic overload and the regulation of myofibrillar protein degradation. Circulation 1993;87: [8] Eble DM, Spragia ML, Ferguson AG, Samarel AM. Sarcomeric myosin heavy chain is degraded by the proteasome. Cell Tissue Res 1999;296: [9] Purintrapiban J, Wang MC, Forsberg NE. Degradation of sarcomeric and cytoskeletal proteins in cultured skeletal muscle cells. Comp Biochem Physiol B Biochem Mol Biol 2003;136: [10] Solomon V, Goldberg AL. Importance of the ATP ubiquitin proteasome pathway in the degradation of soluble and myofibrillar proteins in rabbit muscle extracts. J Biol Chem 1996;271: [11] Bodine SC, Latres E, Baumhueter S, Lai VK, Nunez L, Clarke BA, et al. Identification of ubiquitin ligases required for skeletal muscle atrophy. Science 2001;294: [12] Williams AB, DeCourten-Myers GM, Fischer JE, Luo G, Sun X, Hasselgren PO. Sepsis stimulates release of myofilaments in skeletal muscle by a calcium-dependent mechanism. FASEB J 1999;13: [13] Hare JF, Taylor K. Mechanisms of plasma membrane protein degradation: recycling proteins are degraded more rapidly than those confined to the cell surface. Proc Natl Acad Sci U S A 1991; 88: [14] Beardslee MA, Laing JG, Beyer EC, Saffitz JE. Rapid turnover of connexin43 in the adult rat heart. Circ Res 1998;83: [15] Laing JG, Tadros PN, Green K, Saffitz JE, Beyer EC. Proteolysis of connexin43-containing gap junctions in normal and heat-stressed cardiac myocytes. Cardiovasc Res 1998;38: [16] Leithe E, Rivedal E. Ubiquitination and down-regulation of gap junction protein connexin-43 in response to 12-O-tetradecanoylphorbol 13-acetate treatment. J Biol Chem 2004;279: [17] Leithe E, Rivedal E. Epidermal growth factor regulates ubiquitination, internalization and proteasome-dependent degradation of connexin43. J Cell Sci 2004;117: [18] Shenoy SK, McDonald PH, Kohout TA, Lefkowitz RJ. Regulation of receptor fate by ubiquitination of activated beta 2-adrenergic receptor and beta-arrestin. Science 2001;294: [19] Shenoy SK, Lefkowitz RJ. Multifaceted roles of beta-arrestins in the regulation of seven-membrane-spanning receptor trafficking and signalling. Biochem J 2003;375: [20] Brown K, Gerstberger S, Carlson L, Franzoso G, Siebenlist U. Control of I kappa B-alpha proteolysis by site-specific, signal-induced phosphorylation. Science 1995;267: [21] Traenckner EB, Wilk S, Baeuerle PA. A proteasome inhibitor prevents activation of NF-kappa B and stabilizes a newly phosphorylated form of I kappa B-alpha that is still bound to NF-kappa B. EMBO J 1994;13:

11 420 O. Zolk et al. / Cardiovascular Research 70 (2006) [22] Purcell NH, Tang G, Yu C, Mercurio F, DiDonato JA, Lin A. Activation of NF-kappa B is required for hypertrophic growth of primary rat neonatal ventricular cardiomyocytes. Proc Natl Acad Sci U S A 2001;98: [23] Gupta S, Purcell NH, Lin A, Sen S. Activation of nuclear factorkappab is necessary for myotrophin-induced cardiac hypertrophy. J Cell Biol 2002;159: [24] Kupatt C, Wichels R, Deiss M, Molnar A, Lebherz C, Raake P, et al. Retroinfusion of NFkappaB decoy oligonucleotide extends cardioprotection achieved by CD18 inhibition in a preclinical study of myocardial ischemia and retroinfusion in pigs. Gene Ther 2002;9: [25] Bergmann MW, Loser P, Dietz R, von Harsdorf R. Effect of NF-kappa B inhibition on TNF-alpha-induced apoptosis and downstream pathways in cardiomyocytes. J Mol Cell Cardiol 2001;33: [26] Walowitz JL, Bradley ME, Chen S, Lee T. Proteolytic regulation of the zinc finger transcription factor YY1, a repressor of muscle-restricted gene expression. J Biol Chem 1998;273: [27] Li HH, Kedar V, Zhang C, McDonough H, Arya R, Wang DZ, et al. Atrogin-1/muscle atrophy F-box inhibits calcineurin-dependent cardiac hypertrophy by participating in an SCF ubiquitin ligase complex. J Clin Invest 2004;114: [28] Molkentin JD, Lu JR, Antos CL, Markham B, Richardson J, Robbins J, et al. A calcineurin-dependent transcriptional pathway for cardiac hypertrophy. Cell 1998;93: [29] Skurk C, Izumiya Y, Maatz H, Razeghi P, Shiojima I, Sandri M, et al. The FOXO3a transcription factor regulates cardiac myocyte size downstream of AKT signaling. J Biol Chem 2005;280: [30] Hwang JJ, Allen PD, Tseng GC, Lam CW, Fananapazir L, Dzau VJ, et al. Microarray gene expression profiles in dilated and hypertrophic cardiomyopathic end-stage heart failure. Physiol Genomics 2002;10: [31] Kääb S, Barth AS, Margerie D, Dugas M, Gebauer M, Zwermann L, et al. Global gene expression in human myocardium oligonucleotide microarray analysis of regional diversity and transcriptional regulation in heart failure. J Mol Med 2004;82: [32] Weekes J, Morrison K, Mullen A, Wait R, Barton P, Dunn MJ. Hyperubiquitination of proteins in dilated cardiomyopathy. Proteomics 2003;3: [33] Van Vleet JF, Ferrans VJ, Weirich WE. Pathologic alterations in hypertrophic and congestive cardiomyopathy of cats. Am J Vet Res 1980;41: [34] Kostin S, Pool L, Elsasser A, Hein S, Drexler HC, Arnon E, et al. Myocytes die by multiple mechanisms in failing human hearts. Circ Res 2003;92: [35] Sitte N, Huber M, Grune T, Ladhoff A, Doecke WD, Von Zglinicki T, et al. Proteasome inhibition by lipofuscin/ceroid during postmitotic aging of fibroblasts. FASEB J 2000;14: [36] Bence NF, Sampat RM, Kopito RR. Impairment of the ubiquitin proteasome system by protein aggregation. Science 2001;292: [37] Sitte N, Merker K, Von Zglinicki T, Davies KJ, Grune T. Protein oxidation and degradation during cellular senescence of human BJ fibroblasts: Part II. Aging of nondividing cells. FASEB J 2000;14: [38] Richard P, Charron P, Carrier L, Ledeuil C, Cheav T, Pichereau C, et al. Hypertrophic cardiomyopathy: distribution of disease genes, spectrum of mutations, and implications for a molecular diagnosis strategy. Circulation 2003;107: [39] Carrier L, Bonne G, Bahrend E, Yu B, Richard P, Niel F, et al. Organization and sequence of human cardiac myosin binding protein C gene (MYBPC3) and identification of mutations predicted to produce truncated proteins in familial hypertrophic cardiomyopathy. Circ Res 1997;80: [40] Rottbauer W, Gautel M, Zehelein J, Labeit S, Franz WM, Fischer C, et al. Novel splice donor site mutation in the cardiac myosin-binding protein-c gene in familial hypertrophic cardiomyopathy. Characterization Of cardiac transcript and protein. J Clin Invest 1997;100: [41] Moolman JA, Reith S, Uhl K, Bailey S, Gautel M, Jeschke B, et al. A newly created splice donor site in exon 25 of the MyBP-C gene is responsible for inherited hypertrophic cardiomyopathy with incomplete disease penetrance. Circulation 2000;101: [42] Vignier N, Perrot A, Schulte HD, Richard P, Sebillon P, Schwartz K, et al. Cardiac myosin-binding protein C and familial hypertrophic cardiomyopathy: from mutations identification to human endomyocardial proteins analysis. Circulation 2001;104:II-1 [Suppl.]. [43] Sarikas A, Carrier L, Schenke C, Doll D, Flavigny J, Lindenberg KS, et al. Impairment of the ubiquitin proteasome system by truncated cardiac myosin binding protein C mutants. Cardiovasc Res 2005; 66: [44] Charron P, Dubourg O, Desnos M, Bennaceur M, Carrier L, Camproux AC, et al. Clinical features and prognostic implications of familial hypertrophic cardiomyopathy related to the cardiac myosinbinding protein C gene. Circulation 1998;97: [45] Lutsch G, Vetter R, Offhauss U, Wieske M, Grone HJ, Klemenz R, et al. Abundance and location of the small heat shock proteins HSP25 and alphab-crystallin in rat and human heart. Circulation 1997;96: [46] Bova MP, Yaron O, Huang Q, Ding L, Haley DA, Stewart PL, et al. Mutation R120G in alphab-crystallin, which is linked to a desminrelated myopathy, results in an irregular structure and defective chaperone-like function. Proc Natl Acad Sci U S A 1999;96: [47] Vicart P, Caron A, Guicheney P, Li Z, Prevost MC, Faure A, et al. A missense mutation in the alphab-crystallin chaperone gene causes a desmin-related myopathy. Nat Genet 1998;20:92 5. [48] den Engelsman J, Keijsers V, de Jong WW, Boelens WC. The small heat-shock protein alpha B-crystallin promotes FBX4-dependent ubiquitination. J Biol Chem 2003;278: [49] Pickart CM, Eddins MJ. Ubiquitin: structures, functions, mechanisms. Biochim Biophys Acta 2004;1695: [50] Wang X, Osinska H, Klevitsky R, Gerdes AM, Nieman M, Lorenz J, et al. Expression of R120G-alphaB-crystallin causes aberrant desmin and alphab-crystallin aggregation and cardiomyopathy in mice. Circ Res 2001;89: [51] Chen Q, Liu JB, Horak KM, Zheng H, Kumarapeli AR, Li J, et al. Intrasarcoplasmic amyloidosis impairs proteolytic function of proteasomes in cardiomyocytes by compromising substrate uptake. Circ Res 2005;97: [52] Kukan M. Emerging roles of proteasomes in ischemia reperfusion injury of organs. J Physiol Pharmacol 2004;55:3 15. [53] Campbell B, Adams J, Shin YK, Lefer AM. Cardioprotective effects of a novel proteasome inhibitor following ischemia and reperfusion in the isolated perfused rat heart. J Mol Cell Cardiol 1999;31: [54] Pye J, Ardeshirpour F, McCain A, Bellinger DA, Merricks E, Adams J, et al. Proteasome inhibition ablates activation of NF-kappa B in myocardial reperfusion and reduces reperfusion injury. Am J Physiol Heart Circ Physiol 2003;284:H [55] Gao Y, Lecker S, Post MJ, Hietaranta AJ, Li J, Volk R, et al. Inhibition of ubiquitin proteasome pathway-mediated I kappa B alpha degradation by a naturally occurring antibacterial peptide. J Clin Invest 2000;106: [56] Bao J, Sato K, Li M, Gao Y, Abid R, Aird W, et al. PR-39 and PR-11 peptides inhibit ischemia reperfusion injury by blocking proteasomemediated I kappa B alpha degradation. Am J Physiol Heart Circ Physiol 2001;281:H [57] Luss H, Schmitz W, Neumann J. A proteasome inhibitor confers cardioprotection. Cardiovasc Res 2002;54: [58] Stangl K, Gunther C, Frank T, Lorenz M, Meiners S, Ropke T, et al. Inhibition of the ubiquitin proteasome pathway induces differential heat-shock protein response in cardiomyocytes and renders early cardiac protection. Biochem Biophys Res Commun 2002;291: [59] Ray PS, Martin JL, Swanson EA, Otani H, Dillmann WH, Das DK. Transgene overexpression of alphab crystallin confers simultaneous protection against cardiomyocyte apoptosis and necrosis during myocardial ischemia and reperfusion. FASEB J 2001;15:

The ubiquitin proteasome system in cardiovascular disease Basic mechanisms

The ubiquitin proteasome system in cardiovascular disease Basic mechanisms ECS Congress 2010 Stockholm, Sweden 28 Aug 2010 01 Sep 2010 The ubiquitin proteasome system in cardiovascular disease Basic mechanisms Saskia Schlossarek Department of Experimental and Clinical Pharmacology

More information

Cell Quality Control. Peter Takizawa Department of Cell Biology

Cell Quality Control. Peter Takizawa Department of Cell Biology Cell Quality Control Peter Takizawa Department of Cell Biology Cellular quality control reduces production of defective proteins. Cells have many quality control systems to ensure that cell does not build

More information

Proteasomes. When Death Comes a Knock n. Warren Gallagher Chem412, Spring 2001

Proteasomes. When Death Comes a Knock n. Warren Gallagher Chem412, Spring 2001 Proteasomes When Death Comes a Knock n Warren Gallagher Chem412, Spring 2001 I. Introduction Introduction The central dogma Genetic information is used to make proteins. DNA RNA Proteins Proteins are the

More information

Summary of Endomembrane-system

Summary of Endomembrane-system Summary of Endomembrane-system 1. Endomembrane System: The structural and functional relationship organelles including ER,Golgi complex, lysosome, endosomes, secretory vesicles. 2. Membrane-bound structures

More information

Index. A Action potential duration, increased, by decreases in sodium current,

Index. A Action potential duration, increased, by decreases in sodium current, Heart Failure Clin 1 (2005) 313 319 Index Note: Page numbers of article titles are in boldface type. A Action potential duration, increased, by decreases in sodium current, 201 202 Adenylyl cyclase, overexpression

More information

Cardiovascular Research Advance Access published August 12, New pathophysiological function of protein phosphatase 2A?

Cardiovascular Research Advance Access published August 12, New pathophysiological function of protein phosphatase 2A? Cardiovascular Research Advance Access published August 12, 2008 1 EDITORIAL New pathophysiological function of protein phosphatase 2A? Joachim Neumann* Institut für Pharmakologie und Toxikologie, Medizinische

More information

Molecular Graphics Perspective of Protein Structure and Function

Molecular Graphics Perspective of Protein Structure and Function Molecular Graphics Perspective of Protein Structure and Function VMD Highlights > 20,000 registered Users Platforms: Unix (16 builds) Windows MacOS X Display of large biomolecules and simulation trajectories

More information

The Nobel Prize in Chemistry 2004

The Nobel Prize in Chemistry 2004 The Nobel Prize in Chemistry 2004 Ubiquitous Quality Control of Life C S Karigar and K R Siddalinga Murthy The Nobel Prize in Chemistry for 2004 is shared by Aaron Ciechanover, Avram Hershko and Irwin

More information

Protein Trafficking in the Secretory and Endocytic Pathways

Protein Trafficking in the Secretory and Endocytic Pathways Protein Trafficking in the Secretory and Endocytic Pathways The compartmentalization of eukaryotic cells has considerable functional advantages for the cell, but requires elaborate mechanisms to ensure

More information

1. to understand how proteins find their destination in prokaryotic and eukaryotic cells 2. to know how proteins are bio-recycled

1. to understand how proteins find their destination in prokaryotic and eukaryotic cells 2. to know how proteins are bio-recycled Protein Targeting Objectives 1. to understand how proteins find their destination in prokaryotic and eukaryotic cells 2. to know how proteins are bio-recycled As a protein is being synthesized, decisions

More information

Cellular functions of protein degradation

Cellular functions of protein degradation Protein Degradation Cellular functions of protein degradation 1. Elimination of misfolded and damaged proteins: Environmental toxins, translation errors and genetic mutations can damage proteins. Misfolded

More information

MOLECULAR CELL BIOLOGY

MOLECULAR CELL BIOLOGY 1 Lodish Berk Kaiser Krieger scott Bretscher Ploegh Matsudaira MOLECULAR CELL BIOLOGY SEVENTH EDITION CHAPTER 13 Moving Proteins into Membranes and Organelles Copyright 2013 by W. H. Freeman and Company

More information

Signal Transduction Cascades

Signal Transduction Cascades Signal Transduction Cascades Contents of this page: Kinases & phosphatases Protein Kinase A (camp-dependent protein kinase) G-protein signal cascade Structure of G-proteins Small GTP-binding proteins,

More information

Biochimica et Biophysica Acta

Biochimica et Biophysica Acta Biochimica et Biophysica Acta 1782 (2008) 749 763 Contents lists available at ScienceDirect Biochimica et Biophysica Acta journal homepage: www.elsevier.com/locate/bbadis Review The ubiquitin proteasome

More information

REGULATION OF ENZYME ACTIVITY. Medical Biochemistry, Lecture 25

REGULATION OF ENZYME ACTIVITY. Medical Biochemistry, Lecture 25 REGULATION OF ENZYME ACTIVITY Medical Biochemistry, Lecture 25 Lecture 25, Outline General properties of enzyme regulation Regulation of enzyme concentrations Allosteric enzymes and feedback inhibition

More information

Complexity DNA. Genome RNA. Transcriptome. Protein. Proteome. Metabolites. Metabolome

Complexity DNA. Genome RNA. Transcriptome. Protein. Proteome. Metabolites. Metabolome DNA Genome Complexity RNA Transcriptome Systems Biology Linking all the components of a cell in a quantitative and temporal manner Protein Proteome Metabolites Metabolome Where are the functional elements?

More information

POSTDOCTORAL TRAINING

POSTDOCTORAL TRAINING 2 Curriculum Vitae JULIAN E. STELZER, PhD CONTACT DETAILS Phone: 216-368-8636 julian.stelzer@case.edu EDUCATION 1992-96 McGill University, Montréal, Canada BS, Physiology. 1996-98 University of Saskatchewan,

More information

Molecular Cell Biology Problem Drill 16: Intracellular Compartment and Protein Sorting

Molecular Cell Biology Problem Drill 16: Intracellular Compartment and Protein Sorting Molecular Cell Biology Problem Drill 16: Intracellular Compartment and Protein Sorting Question No. 1 of 10 Question 1. Which of the following statements about the nucleus is correct? Question #01 A. The

More information

All intracellular proteins and many extracellular proteins

All intracellular proteins and many extracellular proteins Review Protein Degradation by the Ubiquitin Proteasome Pathway in Normal and Disease States Stewart H. Lecker,* Alfred L. Goldberg, and William E. Mitch *Nephrology Division, Beth Israel Deaconess, and

More information

NFκB What is it and What s the deal with radicals?

NFκB What is it and What s the deal with radicals? The Virtual Free Radical School NFκB What is it and What s the deal with radicals? Emily Ho, Ph.D Linus Pauling Institute Scientist Department of Nutrition and Food Management Oregon State University 117

More information

The ubiquitin-proteasome system. in bone biology. University of Nottingham. ECTS PhD Training July 5 th Dr Rob Layfield

The ubiquitin-proteasome system. in bone biology. University of Nottingham. ECTS PhD Training July 5 th Dr Rob Layfield The ubiquitin-proteasome system in bone biology Dr Rob Layfield University of Nottingham ECTS PhD Training July 5 th 2009 Images reproduced from: http://www.bostonbiochem.com/overview.php?prod=ubchains

More information

The dynamic regulation of blood vessel caliber

The dynamic regulation of blood vessel caliber INVITED BASIC SCIENCE REVIEW The dynamic regulation of blood vessel caliber Colleen M. Brophy, MD, Augusta, Ga BACKGROUND The flow of blood to organs is regulated by changes in the diameter of the blood

More information

Chapter 6. Antigen Presentation to T lymphocytes

Chapter 6. Antigen Presentation to T lymphocytes Chapter 6 Antigen Presentation to T lymphocytes Generation of T-cell Receptor Ligands T cells only recognize Ags displayed on cell surfaces These Ags may be derived from pathogens that replicate within

More information

Cardiac Myosin Binding Protein C: At the Heart of Hypertrophic Cardiomyopathy in Humans and Domestic Cats

Cardiac Myosin Binding Protein C: At the Heart of Hypertrophic Cardiomyopathy in Humans and Domestic Cats Eukaryon, Vol. 5, March 2009, Lake Forest College Review Article Cardiac Myosin Binding Protein C: At the Heart of Hypertrophic Cardiomyopathy in Humans and Domestic Cats Stephanne Levin* Department of

More information

Chapter 9. Cellular Signaling

Chapter 9. Cellular Signaling Chapter 9 Cellular Signaling Cellular Messaging Page 215 Cells can signal to each other and interpret the signals they receive from other cells and the environment Signals are most often chemicals The

More information

Lecture 15. Signal Transduction Pathways - Introduction

Lecture 15. Signal Transduction Pathways - Introduction Lecture 15 Signal Transduction Pathways - Introduction So far.. Regulation of mrna synthesis Regulation of rrna synthesis Regulation of trna & 5S rrna synthesis Regulation of gene expression by signals

More information

Biol403 MAP kinase signalling

Biol403 MAP kinase signalling Biol403 MAP kinase signalling The mitogen activated protein kinase (MAPK) pathway is a signalling cascade activated by a diverse range of effectors. The cascade regulates many cellular activities including

More information

BIOL 4374/BCHS 4313 Cell Biology Exam #1 February 13, 2001

BIOL 4374/BCHS 4313 Cell Biology Exam #1 February 13, 2001 BIOL 4374/BCHS 4313 Cell Biology Exam #1 February 13, 2001 SS# Name This exam is worth a total of 100 points. The number of points each question is worth is shown in parentheses. Good luck! 1. (2) The

More information

Myocardial lipid accumulation and lipotoxicity in heart failure

Myocardial lipid accumulation and lipotoxicity in heart failure Myocardial lipid accumulation and lipotoxicity in heart failure P. Christian Schulze, MD, PhD New York - Presbyterian Hospital, Columbia University Medical Center, Division of Cardiology, New York, NY,

More information

REGULATORY MECHANISMS OF TRANSCRIPTION FACTOR FUNCTION

REGULATORY MECHANISMS OF TRANSCRIPTION FACTOR FUNCTION Transcription Regulation And Gene Expression in Eukaryotes Cycle G2 (lecture 13709) RG Clerc 04.04.2012 REGULATORY MECHANISMS OF TRANSCRIPTION FACTOR FUNCTION Protein synthesized Protein phosphorylated

More information

In Vivo Animal Models of Heart Disease. Why Animal Models of Disease? Timothy A Hacker, PhD Department of Medicine University of Wisconsin-Madison

In Vivo Animal Models of Heart Disease. Why Animal Models of Disease? Timothy A Hacker, PhD Department of Medicine University of Wisconsin-Madison In Vivo Animal Models of Heart Disease Timothy A Hacker, PhD Department of Medicine University of Wisconsin-Madison Why Animal Models of Disease? Heart Failure (HF) Leading cause of morbidity and mortality

More information

Intracellular Compartments and Protein Sorting

Intracellular Compartments and Protein Sorting Intracellular Compartments and Protein Sorting Intracellular Compartments A eukaryotic cell is elaborately subdivided into functionally distinct, membrane-enclosed compartments. Each compartment, or organelle,

More information

Molecular biology :- Cancer genetics lecture 11

Molecular biology :- Cancer genetics lecture 11 Molecular biology :- Cancer genetics lecture 11 -We have talked about 2 group of genes that is involved in cellular transformation : proto-oncogenes and tumour suppressor genes, and it isn t enough to

More information

Exercise in Adverse Cardiac Remodeling: of Mice and Men

Exercise in Adverse Cardiac Remodeling: of Mice and Men Exercise in Adverse Cardiac Remodeling: of Mice and Men 17-01-2013 Dirk J Duncker Experimental Cardiology, Cardiology, Thoraxcenter Cardiovascular Research Institute COEUR Erasmus MC, University Medical

More information

Cell Signaling part 2

Cell Signaling part 2 15 Cell Signaling part 2 Functions of Cell Surface Receptors Other cell surface receptors are directly linked to intracellular enzymes. The largest family of these is the receptor protein tyrosine kinases,

More information

There are approximately 30,000 proteasomes in a typical human cell Each proteasome is approximately 700 kda in size The proteasome is made up of 3

There are approximately 30,000 proteasomes in a typical human cell Each proteasome is approximately 700 kda in size The proteasome is made up of 3 Proteasomes Proteasomes Proteasomes are responsible for degrading proteins that have been damaged, assembled improperly, or that are of no profitable use to the cell. The unwanted protein is literally

More information

7.06 Cell Biology EXAM #3 April 24, 2003

7.06 Cell Biology EXAM #3 April 24, 2003 7.06 Spring 2003 Exam 3 Name 1 of 8 7.06 Cell Biology EXAM #3 April 24, 2003 This is an open book exam, and you are allowed access to books and notes. Please write your answers to the questions in the

More information

endomembrane system internal membranes origins transport of proteins chapter 15 endomembrane system

endomembrane system internal membranes origins transport of proteins chapter 15 endomembrane system endo system chapter 15 internal s endo system functions as a coordinated unit divide cytoplasm into distinct compartments controls exocytosis and endocytosis movement of molecules which cannot pass through

More information

MBios 401/501: Lecture 12.1 Signaling IV. Slide 1

MBios 401/501: Lecture 12.1 Signaling IV. Slide 1 MBios 401/501: Lecture 12.1 Signaling IV Slide 1 Pathways that require regulated proteolysis 1. Notch and Delta 2. Wnt/ b-catenin 3. Hedgehog 4. NFk-B Our last topic on cell signaling are pathways that

More information

Antigen Presentation to T lymphocytes

Antigen Presentation to T lymphocytes Antigen Presentation to T lymphocytes Immunology 441 Lectures 6 & 7 Chapter 6 October 10 & 12, 2016 Jessica Hamerman jhamerman@benaroyaresearch.org Office hours by arrangement Antibodies and T cell receptors

More information

Ernährung 2006 International Cachexia Workshop Berlin, June 2006

Ernährung 2006 International Cachexia Workshop Berlin, June 2006 Activation Peptides ATP E1 ATP Ubiquitin Proteolysis E2 Proteín Proteasome 26S E2 E3 Conjugation Ernährung 2006 International Cachexia Workshop Berlin, June 2006 Antiproteolytic strategies Prof. Dr. Josep

More information

Protein sorting (endoplasmic reticulum) Dr. Diala Abu-Hsasan School of Medicine

Protein sorting (endoplasmic reticulum) Dr. Diala Abu-Hsasan School of Medicine Protein sorting (endoplasmic reticulum) Dr. Diala Abu-Hsasan School of Medicine dr.abuhassand@gmail.com An overview of cellular components Endoplasmic reticulum (ER) It is a network of membrane-enclosed

More information

Cell Injury MECHANISMS OF CELL INJURY

Cell Injury MECHANISMS OF CELL INJURY Cell Injury MECHANISMS OF CELL INJURY The cellular response to injurious stimuli depends on the following factors: Type of injury, Its duration, and Its severity. Thus, low doses of toxins or a brief duration

More information

Homework Hanson section MCB Course, Fall 2014

Homework Hanson section MCB Course, Fall 2014 Homework Hanson section MCB Course, Fall 2014 (1) Antitrypsin, which inhibits certain proteases, is normally secreted into the bloodstream by liver cells. Antitrypsin is absent from the bloodstream of

More information

2013 John Wiley & Sons, Inc. All rights reserved. PROTEIN SORTING. Lecture 10 BIOL 266/ Biology Department Concordia University. Dr. S.

2013 John Wiley & Sons, Inc. All rights reserved. PROTEIN SORTING. Lecture 10 BIOL 266/ Biology Department Concordia University. Dr. S. PROTEIN SORTING Lecture 10 BIOL 266/4 2014-15 Dr. S. Azam Biology Department Concordia University Introduction Membranes divide the cytoplasm of eukaryotic cells into distinct compartments. The endomembrane

More information

Principles of Genetics and Molecular Biology

Principles of Genetics and Molecular Biology Cell signaling Dr. Diala Abu-Hassan, DDS, PhD School of Medicine Dr.abuhassand@gmail.com Principles of Genetics and Molecular Biology www.cs.montana.edu Modes of cell signaling Direct interaction of a

More information

1. Cardiomyocytes and nonmyocyte. 2. Extracellular Matrix 3. Vessels שאלה 1. Pathobiology of Heart Failure Molecular and Cellular Mechanism

1. Cardiomyocytes and nonmyocyte. 2. Extracellular Matrix 3. Vessels שאלה 1. Pathobiology of Heart Failure Molecular and Cellular Mechanism Pathobiology of Heart Failure Molecular and Cellular Mechanism Jonathan Leor Neufeld Cardiac Research Institute Tel-Aviv University Sheba Medical Center, Tel-Hashomer שאלה 1 התא הנפוץ ביותר (75%~) בלב

More information

Intrasarcoplasmic Amyloidosis Impairs Proteolytic Function of Proteasomes in Cardiomyocytes by Compromising Substrate Uptake

Intrasarcoplasmic Amyloidosis Impairs Proteolytic Function of Proteasomes in Cardiomyocytes by Compromising Substrate Uptake Intrasarcoplasmic Amyloidosis Impairs Proteolytic Function of Proteasomes in Cardiomyocytes by Compromising Substrate Uptake Quanhai Chen,* Jin-Bao Liu,* Kathleen M. Horak, Hanqiao Zheng, Asangi R.K. Kumarapeli,

More information

Name: Multiple choice questions. Pick the BEST answer (2 pts ea)

Name: Multiple choice questions. Pick the BEST answer (2 pts ea) Exam 1 202 Oct. 5, 1999 Multiple choice questions. Pick the BEST answer (2 pts ea) 1. The lipids of a red blood cell membrane are all a. phospholipids b. amphipathic c. glycolipids d. unsaturated 2. The

More information

G-Protein Signaling. Introduction to intracellular signaling. Dr. SARRAY Sameh, Ph.D

G-Protein Signaling. Introduction to intracellular signaling. Dr. SARRAY Sameh, Ph.D G-Protein Signaling Introduction to intracellular signaling Dr. SARRAY Sameh, Ph.D Cell signaling Cells communicate via extracellular signaling molecules (Hormones, growth factors and neurotransmitters

More information

Key Concept B F. How do peptides get loaded onto the proper kind of MHC molecule?

Key Concept B F. How do peptides get loaded onto the proper kind of MHC molecule? Location of MHC class I pockets termed B and F that bind P and P9 amino acid side chains of the peptide Different MHC alleles confer different functional properties on the adaptive immune system by specifying

More information

B F. Location of MHC class I pockets termed B and F that bind P2 and P9 amino acid side chains of the peptide

B F. Location of MHC class I pockets termed B and F that bind P2 and P9 amino acid side chains of the peptide Different MHC alleles confer different functional properties on the adaptive immune system by specifying molecules that have different peptide binding abilities Location of MHC class I pockets termed B

More information

Molecular Cell Biology - Problem Drill 17: Intracellular Vesicular Traffic

Molecular Cell Biology - Problem Drill 17: Intracellular Vesicular Traffic Molecular Cell Biology - Problem Drill 17: Intracellular Vesicular Traffic Question No. 1 of 10 1. Which of the following statements about clathrin-coated vesicles is correct? Question #1 (A) There are

More information

Biochemistry 2 Recita0on Amino Acid Metabolism

Biochemistry 2 Recita0on Amino Acid Metabolism Biochemistry 2 Recita0on Amino Acid Metabolism 04-20- 2015 Glutamine and Glutamate as key entry points for NH 4 + Amino acid catabolism Glutamine synthetase enables toxic NH 4 + to combine with glutamate

More information

General information. Cell mediated immunity. 455 LSA, Tuesday 11 to noon. Anytime after class.

General information. Cell mediated immunity. 455 LSA, Tuesday 11 to noon. Anytime after class. General information Cell mediated immunity 455 LSA, Tuesday 11 to noon Anytime after class T-cell precursors Thymus Naive T-cells (CD8 or CD4) email: lcoscoy@berkeley.edu edu Use MCB150 as subject line

More information

Study of different types of ubiquitination

Study of different types of ubiquitination Study of different types of ubiquitination Rudi Beyaert (rudi.beyaert@irc.vib-ugent.be) VIB UGent Center for Inflammation Research Ghent, Belgium VIB Training Novel Proteomics Tools: Identifying PTMs October

More information

CELLS. Cells. Basic unit of life (except virus)

CELLS. Cells. Basic unit of life (except virus) Basic unit of life (except virus) CELLS Prokaryotic, w/o nucleus, bacteria Eukaryotic, w/ nucleus Various cell types specialized for particular function. Differentiation. Over 200 human cell types 56%

More information

Receptor mediated Signal Transduction

Receptor mediated Signal Transduction Receptor mediated Signal Transduction G-protein-linked receptors adenylyl cyclase camp PKA Organization of receptor protein-tyrosine kinases From G.M. Cooper, The Cell. A molecular approach, 2004, third

More information

Principles of cell signaling Lecture 4

Principles of cell signaling Lecture 4 Principles of cell signaling Lecture 4 Johan Lennartsson Molecular Cell Biology (1BG320), 2014 Johan.Lennartsson@licr.uu.se 1 Receptor tyrosine kinase-induced signal transduction Erk MAP kinase pathway

More information

Introduction to pathology lecture 5/ Cell injury apoptosis. Dr H Awad 2017/18

Introduction to pathology lecture 5/ Cell injury apoptosis. Dr H Awad 2017/18 Introduction to pathology lecture 5/ Cell injury apoptosis Dr H Awad 2017/18 Apoptosis = programmed cell death = cell suicide= individual cell death Apoptosis cell death induced by a tightly regulated

More information

BIOL 4374/BCHS 4313 Cell Biology Exam #2 March 22, 2001

BIOL 4374/BCHS 4313 Cell Biology Exam #2 March 22, 2001 BIOL 4374/BCHS 4313 Cell Biology Exam #2 March 22, 2001 SS# Name This exam is worth a total of 100 points. The number of points each question is worth is shown in parentheses. Good luck! 1. (2) In the

More information

Insulin Resistance. Biol 405 Molecular Medicine

Insulin Resistance. Biol 405 Molecular Medicine Insulin Resistance Biol 405 Molecular Medicine Insulin resistance: a subnormal biological response to insulin. Defects of either insulin secretion or insulin action can cause diabetes mellitus. Insulin-dependent

More information

MCB II MCDB 3451 Exam 1 Spring, minutes, close everything and be concise!

MCB II MCDB 3451 Exam 1 Spring, minutes, close everything and be concise! MCB II MCDB 3451 Exam 1 Spring, 2016 50 minutes, close everything and be concise! Name ID NOTE: QUESTIONS ARE NOT ALL WORTH THE SAME POINTS Total (100) Grade EXAM 1, 2016 MCBII Name 1. Which is UNIQUE

More information

Enzyme-coupled Receptors. Cell-surface receptors 1. Ion-channel-coupled receptors 2. G-protein-coupled receptors 3. Enzyme-coupled receptors

Enzyme-coupled Receptors. Cell-surface receptors 1. Ion-channel-coupled receptors 2. G-protein-coupled receptors 3. Enzyme-coupled receptors Enzyme-coupled Receptors Cell-surface receptors 1. Ion-channel-coupled receptors 2. G-protein-coupled receptors 3. Enzyme-coupled receptors Cell-surface receptors allow a flow of ions across the plasma

More information

PROTEIN TRAFFICKING. Dr. SARRAY Sameh, Ph.D

PROTEIN TRAFFICKING. Dr. SARRAY Sameh, Ph.D PROTEIN TRAFFICKING Dr. SARRAY Sameh, Ph.D Overview Proteins are synthesized either on free ribosomes or on ribosomes bound to endoplasmic reticulum (RER). The synthesis of nuclear, mitochondrial and peroxisomal

More information

Molecular Cell Biology 5068 In Class Exam 1 October 3, 2013

Molecular Cell Biology 5068 In Class Exam 1 October 3, 2013 Molecular Cell Biology 5068 In Class Exam 1 October 3, 2013 Exam Number: Please print your name: Instructions: Please write only on these pages, in the spaces allotted and not on the back. Write your number

More information

Lysosomes and endocytic pathways 9/27/2012 Phyllis Hanson

Lysosomes and endocytic pathways 9/27/2012 Phyllis Hanson Lysosomes and endocytic pathways 9/27/2012 Phyllis Hanson General principles Properties of lysosomes Delivery of enzymes to lysosomes Endocytic uptake clathrin, others Endocytic pathways recycling vs.

More information

Phospho-AKT Sampler Kit

Phospho-AKT Sampler Kit Phospho-AKT Sampler Kit E 0 5 1 0 0 3 Kits Includes Cat. Quantity Application Reactivity Source Akt (Ab-473) Antibody E021054-1 50μg/50μl IHC, WB Human, Mouse, Rat Rabbit Akt (Phospho-Ser473) Antibody

More information

Stretching Cardiac Myocytes: A Finite Element Model of Cardiac Tissue

Stretching Cardiac Myocytes: A Finite Element Model of Cardiac Tissue Megan McCain ES240 FEM Final Project December 19, 2006 Stretching Cardiac Myocytes: A Finite Element Model of Cardiac Tissue Cardiac myocytes are the cells that constitute the working muscle of the heart.

More information

Declaration of conflict of interest. I have nothing to disclose.

Declaration of conflict of interest. I have nothing to disclose. Declaration of conflict of interest I have nothing to disclose. Left Bundle branch block in HF: DO GENETICS MATTER? Silvia Giuliana Priori Cardiovascular Genetics, Langone Medical Center, New York University

More information

KEY CONCEPT QUESTIONS IN SIGNAL TRANSDUCTION

KEY CONCEPT QUESTIONS IN SIGNAL TRANSDUCTION Signal Transduction - Part 2 Key Concepts - Receptor tyrosine kinases control cell metabolism and proliferation Growth factor signaling through Ras Mutated cell signaling genes in cancer cells are called

More information

Molecular Trafficking

Molecular Trafficking SCBM 251 Molecular Trafficking Assoc. Prof. Rutaiwan Tohtong Department of Biochemistry Faculty of Science rutaiwan.toh@mahidol.ac.th Lecture outline 1. What is molecular trafficking? Why is it important?

More information

Connective tissue MUSCLE TISSUE

Connective tissue MUSCLE TISSUE Connective tissue MUSCLE TISSUE Part 1 General features of MT Develop from mesoderm Many cells, less intercellular matrix Function contraction (shortening) Skeletal (striated, voluntary) Types of MT Cardiac

More information

Zool 3200: Cell Biology Exam 4 Part I 2/3/15

Zool 3200: Cell Biology Exam 4 Part I 2/3/15 Name: Key Trask Zool 3200: Cell Biology Exam 4 Part I 2/3/15 Answer each of the following questions in the space provided, explaining your answers when asked to do so; circle the correct answer or answers

More information

Chapter 31. Completing the Protein Life Cycle: Folding, Processing and Degradation. Biochemistry by Reginald Garrett and Charles Grisham

Chapter 31. Completing the Protein Life Cycle: Folding, Processing and Degradation. Biochemistry by Reginald Garrett and Charles Grisham Chapter 31 Completing the Protein Life Cycle: Folding, Processing and Degradation Biochemistry by Reginald Garrett and Charles Grisham Essential Question How are newly synthesized polypeptide chains transformed

More information

C) You find that the Raf kinase is not constitutively active. What was necessary in the previous assay to show any Raf kinase activity?

C) You find that the Raf kinase is not constitutively active. What was necessary in the previous assay to show any Raf kinase activity? PROBLEM SET 3 1. You have obtained immortalized liver cells from a patient who died of Wilson s disease, an inherited disorder of copper metabolism marked by neuronal degeneration and hepatic cirrhosis.

More information

the HLA complex Hanna Mustaniemi,

the HLA complex Hanna Mustaniemi, the HLA complex Hanna Mustaniemi, 28.11.2007 The Major Histocompatibility Complex Major histocompatibility complex (MHC) is a gene region found in nearly all vertebrates encodes proteins with important

More information

Lecture 10. G1/S Regulation and Cell Cycle Checkpoints. G1/S regulation and growth control G2 repair checkpoint Spindle assembly or mitotic checkpoint

Lecture 10. G1/S Regulation and Cell Cycle Checkpoints. G1/S regulation and growth control G2 repair checkpoint Spindle assembly or mitotic checkpoint Lecture 10 G1/S Regulation and Cell Cycle Checkpoints Outline: G1/S regulation and growth control G2 repair checkpoint Spindle assembly or mitotic checkpoint Paper: The roles of Fzy/Cdc20 and Fzr/Cdh1

More information

Regulation of Gene Expression in Eukaryotes

Regulation of Gene Expression in Eukaryotes Ch. 19 Regulation of Gene Expression in Eukaryotes BIOL 222 Differential Gene Expression in Eukaryotes Signal Cells in a multicellular eukaryotic organism genetically identical differential gene expression

More information

Practice Exam 2 MCBII

Practice Exam 2 MCBII 1. Which feature is true for signal sequences and for stop transfer transmembrane domains (4 pts)? A. They are both 20 hydrophobic amino acids long. B. They are both found at the N-terminus of the protein.

More information

Skeletal Muscle. Connective tissue: Binding, support and insulation. Blood vessels

Skeletal Muscle. Connective tissue: Binding, support and insulation. Blood vessels Chapter 12 Muscle Physiology Outline o Skeletal Muscle Structure o The mechanism of Force Generation in Muscle o The mechanics of Skeletal Muscle Contraction o Skeletal Muscle Metabolism o Control of Skeletal

More information

Glutathione Regulation

Glutathione Regulation The Virtual Free Radical School Glutathione Regulation Dale A. Dickinson 1, Henry Jay Forman 1 and Shelly C. Lu 2 1 University of California, Merced, School of Natural Sciences, P.O. Box 2039, Merced,

More information

Skeletal Muscle : Structure

Skeletal Muscle : Structure 1 Skeletal Muscle : Structure Dr.Viral I. Champaneri, MD Assistant Professor Department of Physiology 2 Learning objectives 1. Gross anatomy of the skeletal muscle 2. Myofilaments & their molecular structure

More information

Cell Physiology Final Exam Fall 2009

Cell Physiology Final Exam Fall 2009 Cell Physiology Final Exam Fall 2009 1. I am sure that most of you are stressing now. Your heart rate is higher than normal, your breathing faster and your senses more acute. What phase of stress response

More information

Antibodies for Unfolded Protein Response

Antibodies for Unfolded Protein Response Novus-lu-2945 Antibodies for Unfolded rotein Response Unfolded roteins ER lumen GR78 IRE-1 GR78 ERK Cytosol GR78 TRAF2 ASK1 JNK Activator Intron RIDD elf2α Degraded mrna XB1 mrna Translation XB1-S (p50)

More information

A particular set of insults induces apoptosis (part 1), which, if inhibited, can switch to autophagy. At least in some cellular settings, autophagy se

A particular set of insults induces apoptosis (part 1), which, if inhibited, can switch to autophagy. At least in some cellular settings, autophagy se A particular set of insults induces apoptosis (part 1), which, if inhibited, can switch to autophagy. At least in some cellular settings, autophagy serves as a defence mechanism that prevents or retards

More information

I. Fluid Mosaic Model A. Biological membranes are lipid bilayers with associated proteins

I. Fluid Mosaic Model A. Biological membranes are lipid bilayers with associated proteins Lecture 6: Membranes and Cell Transport Biological Membranes I. Fluid Mosaic Model A. Biological membranes are lipid bilayers with associated proteins 1. Characteristics a. Phospholipids form bilayers

More information

Cell Cycle, Mitosis, and Microtubules. LS1A Final Exam Review Friday 1/12/07. Processes occurring during cell cycle

Cell Cycle, Mitosis, and Microtubules. LS1A Final Exam Review Friday 1/12/07. Processes occurring during cell cycle Cell Cycle, Mitosis, and Microtubules LS1A Final Exam Review Friday 1/12/07 Processes occurring during cell cycle Replicate chromosomes Segregate chromosomes Cell divides Cell grows Cell Growth 1 The standard

More information

The Major Histocompatibility Complex (MHC)

The Major Histocompatibility Complex (MHC) The Major Histocompatibility Complex (MHC) An introduction to adaptive immune system before we discuss MHC B cells The main cells of adaptive immune system are: -B cells -T cells B cells: Recognize antigens

More information

HIV-1 genome organization

HIV-1 genome organization HIV-1 genome organization Gag encodes for a polyprotein that is cleaved into 4 proteins by HIV-1 protease. Gag is present in 2 transcripts: Gag polyprotein precursor and GagPol polyprotein precursor (5%).

More information

Cells communicate with each other via signaling ligands which interact with receptors located on the surface or inside the target cell.

Cells communicate with each other via signaling ligands which interact with receptors located on the surface or inside the target cell. BENG 100 Frontiers of Biomedical Engineering Professor Mark Saltzman Chapter 6 SUMMARY In this chapter, cell signaling was presented within the context of three physiological systems that utilize communication

More information

Immunology - Lecture 2 Adaptive Immune System 1

Immunology - Lecture 2 Adaptive Immune System 1 Immunology - Lecture 2 Adaptive Immune System 1 Book chapters: Molecules of the Adaptive Immunity 6 Adaptive Cells and Organs 7 Generation of Immune Diversity Lymphocyte Antigen Receptors - 8 CD markers

More information

Atrogin-1/muscle atrophy F-box inhibits calcineurin-dependent cardiac hypertrophy by participating in an SCF ubiquitin ligase complex

Atrogin-1/muscle atrophy F-box inhibits calcineurin-dependent cardiac hypertrophy by participating in an SCF ubiquitin ligase complex Research article Atrogin-1/muscle atrophy F-box inhibits calcineurin-dependent cardiac hypertrophy by participating in an SCF ubiquitin ligase complex Hui-Hua Li, 1 Vishram Kedar, 1 Chunlian Zhang, 1 Holly

More information

The functional investigation of the interaction between TATA-associated factor 3 (TAF3) and p53 protein

The functional investigation of the interaction between TATA-associated factor 3 (TAF3) and p53 protein THESIS BOOK The functional investigation of the interaction between TATA-associated factor 3 (TAF3) and p53 protein Orsolya Buzás-Bereczki Supervisors: Dr. Éva Bálint Dr. Imre Miklós Boros University of

More information

Cell Biology Lecture 9 Notes Basic Principles of cell signaling and GPCR system

Cell Biology Lecture 9 Notes Basic Principles of cell signaling and GPCR system Cell Biology Lecture 9 Notes Basic Principles of cell signaling and GPCR system Basic Elements of cell signaling: Signal or signaling molecule (ligand, first messenger) o Small molecules (epinephrine,

More information

Using a proteomic approach to identify proteasome interacting proteins in mammalian

Using a proteomic approach to identify proteasome interacting proteins in mammalian Supplementary Discussion Using a proteomic approach to identify proteasome interacting proteins in mammalian cells, we describe in the present study a novel chaperone complex that plays a key role in the

More information

Hypertrophic Cardiomyopathy

Hypertrophic Cardiomyopathy Hypertrophic Cardiomyopathy From Genetics to ECHO Alexandra A Frogoudaki Second Cardiology Department ATTIKON University Hospital Athens University Athens, Greece EUROECHO 2010, Copenhagen, 11/12/2010

More information

Cell Physiology Final Exam Fall 2008

Cell Physiology Final Exam Fall 2008 Cell Physiology Final Exam Fall 2008 Guys, The average on the test was 69.9. Before you start reading the right answers please do me a favor and remember till the end of your life that GLUCOSE TRANSPORT

More information

Post-translational modifications of proteins in gene regulation under hypoxic conditions

Post-translational modifications of proteins in gene regulation under hypoxic conditions 203 Review Article Post-translational modifications of proteins in gene regulation under hypoxic conditions 1, 2) Olga S. Safronova 1) Department of Cellular Physiological Chemistry, Tokyo Medical and

More information

BIO360 Fall 2013 Quiz 1

BIO360 Fall 2013 Quiz 1 BIO360 Fall 2013 Quiz 1 1. Examine the diagram below. There are two homologous copies of chromosome one and the allele of YFG carried on the light gray chromosome has undergone a loss-of-function mutation.

More information