IMPACT OF INFECTIOUS DISEASES

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1 INFECTIOUS DISEASES

2 IMPACT OF INFECTIOUS DISEASES 14 th century Europe - plague kills 20-45% of the world s population - Cairo - 13% of population succumbs to cholera - Crimean war deaths due to dysentery were 10 times higher than deaths due to casualties - Boer War deaths due to dysentery were 5 times higher than deaths due to casualties

3 Infectious disease is one of the few genuine adventures left in the world. The dragons are all dead and the lance grows rusty in the chimney corner... About the only sporting proposition that remains unimpaired by the relentless domestication of a once free-living human species is the war against those ferocious little fellow creatures, which lurk in the dark corners and stalk us in the bodies of rats, mice and all kinds of domestic animals; which fly and crawl with the insects, and waylay us in our food and drink and even in our love. - (Hans Zinsser,1934 quoted in Murphy 1994)

4 One can think of the middle of the 20 th century as the end of one of the most important social revolutions in history, the virtual elimination of the infectious diseases as a significant factor in social life Sir Macfarland Burnet

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6 Ongoing West Nile Outbreak Being Called The Largest Ever In The US As of August 22, CDC is reporting 1,118 cases of West Nile virus infections in 38 states with 41 deaths. It is the largest West Nile virus outbreak to occur in the US since first reported in Lyle Petersen, CDC s vector-borne disease specialist, told the media that the peak usually occurs in mid-august and that he expects many more cases as it takes a couple of weeks for people to develop illness. The cause for the record number of cases this year is unknown but Petersen speculated that unusually warm weather conditions could have made it easier for transmission to humans to occur. Texas has been at the epicenter of the epidemic with approximately half of the cases (586) and half of the deaths (21). To protect themselves, Americans are being urged to fight the bite by using mosquito repellent with DEET, dressing in long pants and sleeves, being extra careful at dusk and dawn, and draining any standing water around their premises. Epidemiology News Briefs - August 23, 2012 LA Times, 14 August 2012

7 LA Times, 13 August 2012

8 LA Times, Sept 2012

9 Direct economic impact of selected infectious disease outbreaks, Heymann DL. Emerging and re-emerging infections. In Oxford Textbook of Public Health, 5 th ed, 2009, p1267.

10 Factors in Promotion of Infectious Disease Agent Host Environment Agent virus, bacteria, parasite, prion, etc. Host genetic profile, immune capacity, poverty, nutritional status Environment biologic and chemical pollution, climate change, deforestation

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12 DISEASE EMERGENCE AND RE-EMERGENCE: CAUSES GENETIC/BIOLOGIC FACTORS Host and agent mutations Increased survival of susceptibles HUMAN BEHAVIOR POLITICAL SOCIAL ECONOMIC PHYSICAL ENVIRONMENTAL FACTORS crowding ECOLOGIC FACTORS Climatic changes Deforestation Etc.

13 THE CHAIN OF INFECTION Etiologic agent Reservoir Humans Animals Environment (e.g. soil) Portal of exit Mode of transmission Direct Indirect Intermediate host Portal of entry Susceptible host

14 PORTALS OF ENTRY/EXIT* OF INFECTIOUS AGENTS Respiratory influenza, common cold agents, measels Genitourinary sexually transmitted agents Alimentary track (gut) Campylobacter, cholera, salmonella Skin streptococci, Percutaneous (vector borne diseases e.g. arboviruses) Eye C. trachomatis Transplacental cytomegalovirus, HIV * Route of entry and exit not necessarily the same for a single agent e.g. HIV, schistosomaisis

15 MICROBIAL THREATS (1) Newly recognized agents (SARS, acinetobacter) Mutation of zoonotic agents that cause human disease (e.g., H5N1, H1N1) Resurgence of endemic diseases (malaria, tuberculosis) Persisting diseases (measles, polio)

16 MICROBIAL THREATS (2) Development of drug-resistant agents (tuberculosis, gonorrhea) Recognition of etiologic role in chronic diseases (Chlamydia causing respiratory and heart disease; HIV and heart disease) Use of infectious agents for terrorism and warfare (anthrax)

17 National Academies Press Multidrug resistant

18 NEWLY IDENTIFIED INFECTIOUS DISEASES AND PATHOGENS (1) Year Disease or Pathogen 1993 Hantavirus pulmonary syndrome (Sin Nombre virus) 1992 Vibrio cholerae O Guanarito virus 1989 Hepatitis C 1988 Hepatitis E; human herpesvirus HIV 1982 Escherichia coli O157:H7; Lyme borreliosis; human T-lymphotropic virus type Human T-lymphotropic virus Source: Workshop presentation by David Heymann, World Health Organization, 1999

19 NEWLY IDENTIFIED INFECTIOUS DISEASES AND PATHOGENS (2) Year Disease or Pathogen 2012 MERS-CoV 2009 H1N Avian influenza (human cases) 2003 SARS 1999 Nipah virus 1997 H5N1 (avian influenza A virus) 1996 New variant Creutzfelt-Jacob disease; Australian bat lyssavirus 1995 Human herpesvirus 8 (Kaposi s sarcoma virus) 1994 Savia virus; Hendra virus Source: Workshop presentation by David Heymann, World Health Organization, 1999

20 Principles of Infectious Diseases

21 Microbiological Classification of Infectious Diseases Disease is a disturbance in the state of health Microbes cause disease in the course of stealing space, nutrients, and/or living tissue from their symbiotic hosts (e.g., us) To do this, microbes do most of the following: Gain access to the host (contamination) Adhere to the host (adherence) Replicate on the host (colonization) Invade tissues (invasion) Produce toxins or other agents that cause host harm (damage)

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24 BIOLOGIC CHARACTERISTICS OF INFECTIOUS AGENTS Infectivity the ability to infect a host Pathogenicity the ability to cause disease in the host Virulence the ability to cause severe disease in the host Immmunogenicity the ability to induce an immune response in the host

25 Infectious Disease Terms Infectious dose number of organisms needed to successfully infect Latent period - exposure to infectiousness interval Incubation period interval from exposure to clinical symptoms Infectious period interval during which host can transmit infection Reproductive rate ability of an agent to spread in populations Virulence Pathogenicity Immunogenicity Outbreak limited spread Endemic usually present; steady prevalence Epidemic rapid spread Pandemic occurring across countries and in multiple populations

26 Important Terms Used for Infectious Diseases (1 of 2)

27 Important Terms Used for Infectious Diseases (2 of 2)

28 MODES OF TRANSMISSION Direct Droplet Aerosol Skin to skin Indirect Fomites (clothes, blankets, door handles etc) Vectors (e.g. mosquitoes) Food and water Intermediate hosts (e.g. snails)

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30 CLINICAL RESPONSES TO INFECTION BY AN AGENT Inapparent infection no clinical symptoms generated Carrier state usually no clinical symptoms but host can transmit infection for long periods Clinical symptoms Mild disease Severe disease Residual impairment death

31 CLASSIFICATION OF INFECTIOUS AGENTS (1 of 2) Bacteria survive on appropriate media, stain gram-positive or -negative Viruses obbligate intracellular parasites which only replicate intracellularly (DNA, RNA) Fungi non-motile filamentous, branching strands of connected cells Metazoa multicellular animals (e.g.parasites) with complicated life cycles often involving several hosts

32 CLASSIFICATION OF INFECTIOUS AGENTS (2 of 2) Protozoa single cell organisms with a welldefined nucleus Rickettsia very small bacteria spread by ticks Prions unique proteins lacking genetic molecules Chlamydia bacteria lacking cell walls

33 Size Comparison of Microbes

34 Bacterial Cell Structure James D. Dick, PhD, Johns Hopkins University

35 Taxonomy of Bacteria Strain O157:H7

36 Microbiological Classification of Infectious Diseases Bacteria are classified by their Gram stain characteristics. Gram staining is the application of a crystal violet dye to a culture of bacteria. Bacteria that retain the color of the dye are called Gram positive; bacteria that don't are Gram negative. The Gram stain attaches to peptidoglycan in the bacterial cell wall. In Gram-negative bacteria, the peptidoglycan layer is protected by an outer membrane.

37 Microbiological Classification of Infectious Diseases

38 Microbiological Classification of Infectious Diseases

39 Microbiological Classification of Infectious Diseases Viruses are acellular, obligate intracellular organisms. The complete infectious virus is termed a virion. The virion consists of the specific nucleic acid (DNA or RNA) surrounded by a protein coat (capsid). Some viruses are enveloped which means that they possess a lipoprotein coat that surrounds the capsid and is acquired from infected host cell membrane. Viruses that lack an envelope are naked.

40 Microbiological Classification of Infectious Diseases Viruses are typically classified by: Genetic material (DNA vs. RNA) Strandedness (single vs. double) Size and shape of the capsid and whether its enveloped or non-enveloped Method of replication

41 Microbiological Classification of Infectious Diseases

42 Microbiological Classification of Infectious Diseases

43 Microbiological Classification of Infectious Diseases

44 Viruses Entry into the Host Cell with an Envelope

45 Viruses Entry into the Host Cell with an Envelope

46 Microbiological Classification of Infectious Diseases All fungi are chemoheterotrophs Pathogenic fungi have two forms: yeasts (unicellular) and molds (multicellular) Some fungi are dimorphic (this is particularly true for the pathogenic fungi) Molds grow as filamentous, branching strands of connected cells known as hyphae

47 Microbiological Classification of Types of Parasites: Infectious Diseases Protozoa: Single-celled, microscopic organisms that can perform all necessary functions of metabolism and reproduction. Some protozoa are free-living, while others parasitize other organisms for their nutrients and life cycle. The morphology of protozoa varies widely and includes oval, spherical and elongated cells that can range in size from 5-10 to 1-2 mm. Structurally, the protozoa resemble other eukaryotic cells and possess a cytoplasmic membrane that encloses cytoplasm containing membrane-bound nuclei, mitochondria, 80s ribosomes and a variety of organelles.

48 Microbiological Classification of Types of Parasites: Infectious Diseases Helminths: A large, multicellular organism (worm) that is generally visible to the naked eye in its adult stages. Helminths can be free-living or parasitic. Nematodes: Roundworms Trematodes: Flukes Cestodes: Tapeworms

49 Microbiological Classification of Infectious Diseases Prions are abnormal, transmissible agents that are able to induce abnormal folding of normal cellular prion proteins in the brain, leading to brain damage and the characteristics signs and symptoms of the disease. Prion diseases are usually rapidly progressive and always fatal.

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51 WHAT S AHEAD? Microbes and vectors swim in the evolutionary stream, and they swim faster than we do. Bacteria reproduce every 30 minutes. For them, a millennium is compressed into a fortnight. They are fleet afoot, and the pace of our research must keep up with them, or they will overtake us. Microbes were here on earth 2 billion years before humans arrived, learning every trick for survival, and it is likely that they will be here 2 billion years after we depart (Krause 1998).

52 The Immune Response

53 Immune System Characteristics Distinguishes between self and non-self Remembers pathogens (memory) Responds to specific antigens (subunits/ epitopes)

54 Immune Cells and Immune Responses

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56 Types of Cell-Mediated Immunity Cellular Innate non-specific immediate response Adaptive specificity and memory require days to weeks Humoral Specificity and memory requires days to weeks to produce immune globulins (antibodies) Cells Monocytes precursors of macrophages Macrophages ingest and eliminate (innate) present antigens (adaptive) Dendritic cells induce innate immunity present antigens (adaptive) and stimulate cytokine production Lymphocytes T cells mature in the thymus B cells mature in the bone marrow Natural killer cells

57 Immune Cells T cells CD4 activate other cells of the immune system CD8 inhibit or kill infected cells B cells Produce specific antigen-binding immune globulins Enhance phagocytosis (innate) NK cells Respond initially to immune challenges

58 Humoral Immunity (B cells) Production of immune globulin (antibodies) Adaptive response requires days to weeks Types of immune globulins produced: IgM early response (3-6 months) IgG later response, persists as memory IgA secreted by mucosal tissue and in blood IgE responds to parasites, small percentage Specific response each antibody recognizes (responds) to only one epitope (sub-component of an antigen)

59 Immune System Components (1 of 3) Antigens trigger an immune response Epitopes subunit of an antigen (amino acids, sugars, lipids or nucleotides) that bind with specific immune receptors Antigen receptors on immune cells, bind only one epitope, which activates the immune response

60 Immune Activation of Cells Binding of antigen to cells receptor: Stimulates cell proliferation Releases regulatory and effector molecules (cytokines) recognized by other immune cells

61 To activate a T cell you need: Foreign antigen Antigen-presenting cell (APC)

62 T Cell Activation CD3 Quiescent T Cell CD3 Stimulation Anergic T Cell CD28 CD3 Quiescent T Cell Co-Stimulation Activated T Cell CD28

63 Immune System Components (2 of 3) B cells recognize raw antigens T cells recognize only antigens processed by antigen-presenting cells to epitopes and attach the correct MHC protein to it MHC molecules (human leukocyte antigens (HLA))

64 Immune System Components (3 of 3) Class I (A, B, C) expressed on nucleated cells - trigger CD8 killing Class II (DR, DP) expressed on cells of the immune system trigger CD4 cells Cytokines chemicals that facilitate communication between different types of cells

65 Natural Killer (NK) cells Killer inhibitory receptors (KIR) on NK cells Down-regulation of MHC class I molecules by virally infected cells reduces KIR and activates NK cells

66 Cytokines (Immune Communicators) Hormone-like proteins Released by cell activation Affect immune responses from own and other cells Regulate cell activity Cytokine receptors bind cytokines and trigger action Antigen-independent One cytokine can have multiple roles Chemokine a cytokine produced by immune and non-immune cells that attracts cells to site of infection and also inhibits some immune responses