Better Cancer Monitoring with Circulating Tumor DNA. March 2016
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1 Better Cancer Monitoring with Circulating Tumor DNA March 2016
2 Forward-Looking Statements Statements in this presentation about the Company's expectations, applications of its technology, markets, launch of tests and other statements that are not historical facts constitute forward-looking statements for purposes of the safe harbor provisions of the Private Securities Litigation Reform Act of 1995 and are based on management's current beliefs, assumptions, estimates and projections. Actual results may differ materially from those projected in the forward-looking statements for various reasons, including, without limitation, risks associated with product and test development, test transfer to contracting labs, government regulation, market acceptance, limited commercial experience, dependence on key personnel, obtaining financing and other factors discussed in the Company's periodic reports filed with the Securities and Exchange Commission, and the Company anticipates that subsequent events and developments will cause its views to change. While the Company may elect to update these forwardlooking statements in the future, it specifically disclaims any obligation to do so. These forward-looking statements should not be relied upon as representing the Company s views as of any date subsequent to the date of this presentation. Copyright 2016 Trovagene, Inc. Confidential 2
3 Our Goal Improve Treatment Outcomes with Noninvasive Cancer Monitoring Trovagene s technology noninvasively detects and quantitates circulating tumor DNA in urine and plasma for improved disease management Copyright 2016 Trovagene, Inc. Confidential 3
4 Company Overview NASDAQ: TROV Founded in 1999 NASDAQ listing in 2012 Technology feasibility established 2013 Clinical feasibility established 2014 Marketing launch initiated 2015 Cash: $74M as of Sept 30, 2015 Proprietary methods of extracting, purifying, detecting and quantifying oncogene mutations in cell-free DNA Clinical collaborations with leading cancer centers and pharmaceutical partners Trovagene s noninvasive liquid biopsy assays are used to detect and monitor oncogene mutation status, response to therapy, disease progression, minimal residual disease and recurrence CLIA certified, CAP accredited, high complexity lab to offer diagnostic services Copyright 2016 Trovagene, Inc. Confidential 4
5 Experienced Leadership Team Antonius Schuh, PhD Chief Executive Officer Stephen Zaniboni Chief Financial Officer Mark Erlander, PhD Chief Scientific Officer Sorrento Therapeutics, AviaraDx, Arcturus, Sequenom PhD Pharmaceutical Chemistry, University of Bonn Awarepoint, XIFIN, Sorrento Therapeutics, AviaraDx, Arcturus, Sequenom CPA, BS Accounting Boston University, MBA Boston College BioTheranostics, AviaraDx, Arcturus, J&J, Scripps Research Institute BS UCDavis, MS Biochemstry Iowa State University, PhD Neuroscience UCLA Matt Posard Chief Commercial Officer Karsten Schmidt, PhD Senior VP, Technology Operations Illumina Inc., Biosite Dx, Gen-Probe BA Quantitative Economics and Decision Sciences, UCSD Sequenom, Inc., Sanofi-Aventis Deutschland GmbH (formerly: Rhône-Poulenc Rorer), Fisons plc PhD The University of Bonn Copyright 2016 Trovagene, Inc. Confidential 5
6 Significant Market Opportunity Physicians lack tools to effectively monitor and react to changes in cancer over time Trovagene Precision Cancer Monitoring (PCM) delivers critical information to detect and monitor actionable cancer mutations over time Insufficient Imaging Tools in Oncology Still Yield Huge Market Opportunity for Trovagene to Capture Liquid Biopsy Market Share $15B 2015 est. Liquid Biopsy Market $13.6B est. Therapy Selection $1.7B Treatment Monitoring $5.0B Recurrence Monitoring $6.9B Cancer already in advanced state No molecular data delivered Source: 2010 BCC Research Source: 2015 Liquid Biopsy Report Copyright 2016 Trovagene, Inc. Confidential 6
7 New Standard of Care Enabled by Trovagene Technology Trovagene PCM platform allows physicians to make clinically actionable decisions in real-time Minimal Residual Disease (MRD) Detection Quantitate Drug Response Monitoring PROCEDURE Biopsy Surgery Treatment Biopsy Treatment IMAGING Every 6-8 weeks Every 6-8 weeks PCM CLINICAL UTILITY Monitoring for minimal residual disease and tumor recurrence Earlier detection of metastatic disease Detection of clinically actionable mutations Alternative to tissue biopsy Assists in identifying most effective treatment Eliminates risk of adverse events associated with tissue biopsy procedure Assess tumor cell kill by therapy and monitor tumor mutation burden Immediate assessment of therapy effect Switch from ineffective therapy weeks in advance of imaging Monitoring for disease progression and emergence of resistance Anticipates and enables next therapy to target tumor resistance Copyright 2016 Trovagene, Inc. Confidential 7
8 Advantages of Circulating Tumor DNA (ctdna) 1 ctdna enters blood stream and kidneys Tumor cells Apoptosis or necrosis occurs, ctdna is released Blood Urine High-depth systemic understanding of tumor dynamics Captures intra- and inter-tumor heterogeneity Delivers clinically actionable data in real time Flexibility of more frequent testing Provides diagnostic and prognostic information before treatment, during treatment, and at disease progression 1 Bardelli and Diaz. JCO Copyright 2016 Trovagene, Inc. Confidential 8
9 Trovagene s Precision Cancer Monitoring (PCM) Platform Proprietary mutant allele enrichment method enables ultra-sensitive detection and quantitative monitoring of clinically actionable mutations Collection, Extraction and Isolation of ctdna ~300,000 genome equivalents (GEq) of ctdna/200 ml of urine The extracted sample contains a small number of mutant DNA fragments in a sea of wild-type Mutant Allele Enrichment fold enrichment Wild-Type Mutants Our proprietary blocking technology selectively inhibits amplification of wild-type fragments while enabling amplification of mutant fragments Detection and Quantification Enables monitoring over time This results in a much higher mutant to wild-type ratio, enabling ultra-sensitive detection and quantification Copyright 2016 Trovagene, Inc. Confidential 9
10 Intellectual Property Patent Families Patent Term Concentrating Urine Family bp TrNA Family Small Footprint Family Monitoring Disease Family bp TrNA Family 2035 US provisional app filed 2034 US provisional app filed 2034 US provisional app filed 2034 US provisional app filed 2029 US & EU Anion Exchange Purification Family Viral and Pathogen TrNA Families TrNA Patent Family 2026 US, EU, JP, China, Australia, Canada, India 2018 US & EU 2027 US, EU, Canada Copyright 2016 Trovagene, Inc. Confidential 10
11 Commercial Revenue Opportunities Core Technologies CLIA Clinical Testing Services Tech Transfer & TrovaCloud Exchange Clinical Trial Services & Translational Medicine Support Copyright 2016 Trovagene, Inc. Confidential 11
12 Strategy to Drive Clinical Adoption and Reimbursement QUALITATIVE QUANTITATIVE STANDARD OF CARE Stage 1 Tumor Status Stage 2 Tumor Dynamics Stage 3 Improve Patient Outcomes Demonstrate concordance of oncogene mutation status between ctdna and tumor tissue Clinical Utility: Determine mutational status of actionable biomarkers in ctdna when tissue biopsy is not available Expand mutational coverage of the PCM platform Clinical Utility: Quantitatively assess mutational status in ctdna longitudinally, as an indicator of responsiveness to therapy, disease status, and emergence of resistance mutations Demonstrate, in multi-institutional trials, that results from ctdna-based monitoring of actionable mutations increases patient progression-free survival (PFS) and overall survival (OS) Demonstrate health economic benefits of noninvasive oncogene mutation monitoring Clinical Utility: Quantitatively assess patient mutational status in ctdna longitudinally for mutational status and early detection of resistance to therapy as a decision tool for therapy selection Copyright 2016 Trovagene, Inc. Confidential 12
13 Lung Cancer: Clinical Utilities with ctdna CLINICAL UTILTY MOLECULAR DIAGNOSIS AND RESECTABLE DISEASE Success of surgery Re-staging of cancer Adjuvant radiation/chemo or not? STAGE IV METASTATIC DISEASE Selection of correct first line therapy within days of diagnosis patients go on right treatment early (anti-egfr or chemo?) Re-staging of cancer, response and emergence of resistance Replacement of second biopsy and selection of correct second line therapy (anti-t790m or Chemo?) SUSPICIOUS NODULE NSCLC Tissue Biopsy Surgery Adjuvant First Line Therapy Treatment Imaging (every 6-8 weeks) Tissue Biopsy Second Line Treatment Imaging (every 6-8 weeks) CIRCULATING TUMOR DNA Molecular Detection Detection of tumor DNA mutations that represent >95% NSCLC Minimal Residual Disease Response Monitoring Monitoring MRD with tumor DNA mutation(s) unique to patient Detection & Monitoring for Emergence of Resistance Detection of EGFR activating & resistant T790M mutations in urine Molecular Detection & Response Monitoring Detection of EGFR activating & resistant T790M mutations in urine = Currently being evaluated for clinical studies = Clinical data regarding sensitivity & monitoring Copyright 2016 Trovagene, Inc. Confidential 13
14 Lung Cancer: Mechanisms of Resistance Mechanisms of resistance in patients with activating EGFR mutations MET amplification 3% Small cell + MET 1% Small cell 1% Small cell + T790M 2% MET + T790M 3% Unknown 18% HER2 8% T790M 60% HER2 + T790M 4% Mechanisms of Resistance T790M 60% Her2 Amplification NFkB Upregulation MET Amplification AXL Upregulation Histologic Transformation Yu et al Clin Can Res 2013 Copyright 2016 Trovagene, Inc. Confidential 14
15 Lung Cancer: Monitoring for Resistance Urinary Detection of EGFR T790M Resistance Mutation in Advance of Radiographic Progression 1 Patient 1 Patient 3 Patient 10 Patient 20 Urine T790M Copies/100K GE /11/14 T790M detected 5/21/14 6/30/14 8/9/14 PD 9/18/14 Urine T790M Copies/100K GE /21/14 6/10/14 T790M detected 7/30/14 9/18/14 11/7/14 12/27/14 PD 2/15/15 Urine T790M Copies/100K GE /10/14 T790M detected 7/20/14 PD 8/29/14 10/8/14 Urine T790M Copies/100K GE /29/14 T790M detected 9/18/14 PD 10/8/14 10/28/14 Early T790M Detection (Days to Radiographic Progression) Patient Patient 3 52 Patient Patient Husain et al., ELCC 2015 Copyright 2016 Trovagene, Inc. Confidential 15
16 Lung Cancer: Quantitate Drug Response Monitoring Urinary ctdna EGFR Mutation Within First 2 Weeks of Targeted Therapy Predicts Subsequent Radiographic Response in Patients Patient 1 Urine EGFR Copies/100K GE /20/ /27/2014 T790M 11/3/2014 Week 1 on drug Ex19 del 11/10/ /17/ /24/2014 Size on CT scan 12/1/ /8/ /15/ wks CT scan 12/22/ /29/2014 1/5/2015 1/12/2015 1/19/ wks CT scan Sum of Longest Diameters (mm) Best Overall Response PR Copies/100K GE (95% CI) Time on Drug T790M Exon 19 del Baseline 24 (19-38) 167 ( ) Day 1 (4 h on drug) < LOD 8 (6-13) Day ( ) 87 (65-139) Day 2 34 (28-55) 117 (88-187) Day 3 48 (39-78) 36 (27-58) Day 4 < LOD < LOD Day 5 15 (13-25) < LOD Day 6 < LOD 19 (14-30) Day 7 < LOD < LOD Week 2 < LOD < LOD Week 3 < LOD < LOD Week 4 < LOD < LOD Week 6 < LOD < LOD Week 12 < LOD < LOD LOD (T790M) = 2 copies (12 copies/100k GE) LOD (Ex 19 del) = 1 copy (6 copies/100k GE) SLD = Sum of the Longest Diameter of Lesions 1 Husain et al., ELCC 2015 Copyright 2016 Trovagene, Inc. Confidential 16
17 Case Study: Value of Higher Sensitivity of Urine-Based Liquid Biopsy Compared to Tissue Biopsy Patient: 71-year-old female Disease: Non-Small Cell Lung Cancer (NSCLC) Trovagene PCM Applied: Detection of L858R and T790M Mutations September 2013 December 2013 March 2014 May 2014 August 2014 November 2014 January 2015 February 2015 Needle tissue biopsy performed, confirming NSCLC Patient started on erlotinib Scan confirmed decrease in tumor and metastases Scan confirmed stable disease Scan confirmed new lesion Patient declined re-biopsy and remained on erlotinib Tissue biopsy performed Sample insufficient for comprehensive genomic evaluation Imaging confirmed progression Afatinib started Re-biopsy performed Results not reportable - insufficient amount of extracted DNA Patient started on chemotherapy and experienced intolerable side effects Urine obtained for ctdna T790M mutation identified Patient started on AZ9291 showed good symptomatic and imaging response ECD CRC PANC MEL Copyright 2016 Trovagene, Inc. Confidential 17
18 29 Clinical Studies to Validate & Integrate our PCM Platform Disease Ongoing Pending Protocol in Dev/Approval Market Size U.S. (# of pts) Lung Cancer (NSCLC) Colorectal Cancer Pancreatic Cancer 7 _ 399, ,154, ,000 Melanoma ,000 ECD/LCH 2 2 5,000 All-Comers, Metastatic Cancers Total # of Studies 1 525, Copyright 2016 Trovagene, Inc. Confidential 18
19 Demonstrating the Analytical & Clinical Value of PCM Platform Expected in Q Expected in Q Expected in Q Expected in Q Personalized Medicine World Congress Oral Presentation Revolutionizing Cancer Care with ctdna Research Brief: Complete Response to BRAF-MEK Combination in Colorectal Neuroendocrine Tumors Harboring Oncogenic BRAF V600E Alterations Samuel Klempner, MD IASLC 16th Annual Targeted Therapies of Lung Cancer Meeting Clinical Advisory Board Meeting Noninvasive Urine Testing of EGFR Activating Mutation and T790M Resistance Mutation in NSCLC: A Case Report David Berz, MD PCR Mutation Enrichment-NGS Method for Absolute Quantitation and Monitoring of Circulating Tumor DNA Fragments in Urine or Plasma of Cancer Patients Filip Janku, MD (MDACC) AACR Annual Meeting Abstract: ctdna Assay Performance for Detection and Monitoring KRAS Mutations in Urine for Patients with Advanced Cancers ASCO Abstract: Quantitative Urinary KRAS for Treatment Decisions in Patients with Metastatic CRC Barzi Abstract: Epidermal Growth Factor Receptor (EGFR) Genotyping of Matched Urine, Plasma and Tumor Tissue from NSCLC Patients Treated with Rociletinib Clovis ASCO Clinical Advisory Board Meeting Detection and monitoring of EGFR mutations in matched urine and plasma ctdna of NSCLC patients treated with Rociletinib (CO-1686) Clovis Monitoring Daily Dynamics of Early Tumor Response to Targeted Therapy by Detecting ctdna in Urine UCSD Prognostic and predictive value of plasma ctdna KRAS mutations in unresectable pancreatic cancer patients University of Copenhagen Monitoring for therapeutic response in NSCLC: A Case Report Jacob Sands, MD Comparison of Clinical Response Rates to Rociletinib in NSCLC Patients Positive for T790M Mutation by Tissue, Plasma and Urine Clovis ESMO 2016 Abstract EORTC-NCI-AACR Molecular Targets and Cancer Therapeutics Abstract World Conference on Lung Abstract AMP (Pathology) Oral Presentation Comparison of Clinical Sensitivity Performance in Plasma ctdna: Trovagene Assays Versus ddpcr Bardelli Publication Oral Presentations Abstracts / Posters Advisory Board Copyright 2016 Trovagene, Inc. Confidential 19
20 Optimizing the Commercial Model for Scale-Up Utilize small sales force to target early adopter clinicians Clinical Experience Program (CEP) established early evangelists and reference sites Foundational adoption and evidence to demonstrate clinical utility May June, 2015 July September, CLINICAL INTEREST SAMPLE SUBMISSION OPERATIONAL READINESS CLINICAL UTILITY REIMBURSEMENT Significant adoption 500% above goal Multiple applications 100% urine samples 90%+ quality samples Office & home collection <7 day turnaround time Average 2+ assays/sample New LIMS in July CEP Experience Case studies Gathering evidence of clinical utility Billable samples increasing TPA (Third Party Administrator) contracts in place Copyright 2016 Trovagene, Inc. Confidential 20
21 Reimbursement Strategy Based on Value Creation Where has the MolDx Industry Missed? Trovagene Difference Expected Outcome Clinical Relevance Multi-gene panels with relatively few actionable mutations Tests are designed to focus only on clinically relevant biomarkers, with clear clinical utilities Maximize clinical relevance, simplify testing service, and improve gross margins Test Model One and done test model Create value for physicians by quantitatively monitoring patient disease over time Provide insight for clinical decision making and increase valuation and growth potential over competitors Health-Economic Impact High cost, low clinical utility, limited impact on outcomes Greater clinical utility enables clinicians to optimize treatment and save costs to the healthcare system Increase access to personalized genomics and impact standard of care Copyright 2016 Trovagene, Inc. Confidential 21
22 Revenue Cycle Roadmap 1H H H 2017 ESTABLISH BEST PRACTICES Payor Enrollment Initiate Contract Negotiation Secure Z-Codes Appeal Strategy Developed Finalize Coding Method Perform Health-Economic Retrospective Analysis EVALUATE AND OPTIMIZE Expand Payor Contracts & Covered Lives Review First Reportable Reimbursement Stats Expand Z-code Hot-Spot Test Menu Evaluate Early Appeals Practices & Success Finalize Large-Scale Prospective Health-Economic Study Plan VALIDATE AND EXPAND Initiate Prospective Health-Economic Study Engage Regional & National Payors Establish CMS/Noridian Billing Copyright 2016 Trovagene, Inc. Confidential 22
23 Third Party Administrator (TPA) Contracts Secured >100 million in-network covered lives expected in million covered lives 22 + million covered lives 14 million covered lives 40 million covered lives 4 million covered lives Copyright 2016 Trovagene, Inc. Confidential 23
24 2016 Strategic Goals Clinical Studies Clinical Evidence Marketing & Adoption Reimbursement Strategic Partnerships 29 clinical studies 8+ abstracts and oral presentations in 2016 Real world case studies >100 million covered lives Clinical trial services Top academic institutions and Comprehensive Cancer Centers 9 publications High clinical interest and strong service levels Finalize large-scale Prospective health- Economic study plan Translational research collaborations Sales & marketing scale up Expand global presence Copyright 2016 Trovagene, Inc. Confidential 24
25 For further information Please contact: Stephen Zaniboni, CFO
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