Inside-out: Unpredicted Annexin A2 localisation on the surface of extracellular vesicles

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Correspondence km510@cam.ac.uk Disciplines Cell Biology Keywords Annexin Transport Unconventional Extracellular Vesicles Type of Observation Standalone Type of Link Orphan Data Submitted Jan 6, 2016 Published Feb 19, 2016 Inside-out: Unpredicted Annexin A2 localisation on the surface of extracellular vesicles Sarah Stewart, Florian Gessler, Stefano Pluchino, Kevin Moreau Clinical Biochemistry, Institute of Metabolic Science; Department of Clinical Neurosciences, Wellcome Trust-Medical Research Council Stem Cell Institute Abstract Extracellular vesicles (EVs) contain many proteins, both cytosolic and surface bound. The current model for EV biogenesis dictates that cytosolic proteins remain in the lumen, and cell surface proteins reside on the outside of vesicles. This is consistent with the traditional protein trafficking pathway, where proteins destined for the plasma membrane contain a signal sequence targeting them to the secretory pathway. According to this classical pathway for membrane and secretory protein trafficking, proteins lacking a signal sequence should not reside at the cell surface. It has been shown that transmembrane proteins are retained in the membrane of EVs, and RNAs reside in the lumen of EVs. However, little is known about the packaging and location of other proteins enriched in EVs. Annexin A2 is a cytosolic protein abundant in EVs. We show for the first time that Annexin A2 is expressed not only in the lumen of EVs as predicted but also on the surface of EVs. This raises fundamental questions regarding Annexin A2 transport to the outer leaflet of the EV membrane as it lacks a signal peptide for secretion. 3 x Objective To investigate the packaging and localisation of Annexin A2 in extracellular vesicles. Triple Blind Peer Review The handling editor, the reviewers, and the authors are all blinded during the review process. Full Open Access Supported by the Velux Foundation, the University of Zurich, and the EPFL School of Life Sciences. Introduction Practically all cells (under both physiological and pathological conditions) secrete small non-apoptotic vesicles [1]. These include microvesicles and exosomes, collectively termed extracellular vesicles (EVs) [2]. Microvesicles are formed during plasma membrane shedding, whereas exosomes originate from the endosomal pathway [2] [3]. EVs contain a specific subset of lipids, RNAs, and proteins that can be transferred between cells [4] [3] [5]. The current model for EV biogenesis dictates that cytosolic proteins are in the lumen, and cell surface proteins are on the exterior of EVs. Annexin A2 is a cytosolic calcium-dependent membrane-binding protein lacking a signal sequence for secretion (leaderless protein). Annexin A2 is involved in many cellular processes including membrane trafficking events [6]. Through its membrane-binding capacity, Annexin A2 has been shown to be involved in lipid organisation at sites of membrane-actin interactions, calcium-mediated endocytosis, and may have a role in ion channel activity [7]. Along with several other proteins, Annexin A2 is consistently identified and enriched in EVs [3] (Exocarta/Vesiclepedia databases) [8]. Here we demonstrate that, despite being a cytosolic protein, Annexin A2 localises not only in the lumen but also on the surface of EVs. 4.0 Creative Commons 4.0 This observation is distributed under the terms of the Creative Commons Attribution 4.0 International License. DOI: 10.19185/matters.201602000015 Matters (ISSN: 2297-8240) 1

Inside-out: Unpredicted Annexin A2 localisation on the surface of extracellular vesicles DOI: 10.19185/matters.201602000015 a Matters (ISSN: 2297-8240) 2

Inside-out: Unpredicted Annexin A2 localisation on the surface of extracellular vesicles Figure Legend Annexin A2 is located on the surface of extracellular vesicles. (A) Workflow diagram for extracellular vesicle isolation by ultracentrifugation. (B) Size distribution of PANC1 EVs isolated by ultracentrifugation. The diameter of EVs was measured by tunable resistance pulse sensing and data plotted as a percentage of the total count analysed in one experiment. The mean diameter is 153 nm and the mode diameter is 98 nm. (C) PANC1 EVs are positive for the exosomal marker CD63 and negative for the Golgi protein GGA1. EVs and PANC1 cell lysate were resolved by western blot (under non-reducing conditions for CD63) and probed for CD63, GGA1, or actin. Representative western blot where n = 3. (D) PANC1 EVs contain acetylcholine esterase. EVs were lysed and acetylcholine esterase activity measured over time on a colorimetric substrate at an absorbance of 410 nm. Representative data, n = 2. (E) Annexin A2 is on the surface of PANC1 EVs. Left: Diagram of the experiment showing the removal of surface-bound Annexin A2 with EDTA treatment. Right: EVs treated with or without EDTA, EVs pellet and supernatant resolved by western blot. Annexin A2 is detected in both EV pellet and only in the supernatant of EDTA-treated EVs. The blot was also probed for actin as a control. PANC1 cell lysates were run on each blot as a positive control. Representative western blot where n >3. (F) Mass spectrometry analyses of EDTA treatment as in E. Data plotted as the fold increase of protein in the supernatant with respect to untreated samples. Representative data from n = 2. (G) NSC EVs treated with or without EDTA as in panel E (right). Representative western blot where n = 2. (H) Annexin A2 on the surface of EVs is digested by trypsin. Left: Diagram of the experimental concept, where trypsin cleaves surface bound Annexin A2. Right: EVs treated with trypsin in the presence or absence of triton (Tx-100) detergent resolved by western blot. Surface-bound Annexin A2 is digested by trypsin and cleavage products detected. Two exposures shown for Annexin A2. Representative western blot where n >3. Results & Discussion EVs were produced from the pancreatic cancer cell line, PANC1, and isolated by ultracentrifugation (Figure 1A) as described [3]. This cell line was chosen as it produces a large number of EVs and expresses a high level of Annexin A2. Isolated EVs were characterised according to size distribution and common exosomal markers. Tunable resistance pulse sensing showed that purified EVs had a mean diameter of 153 nm and a mode of 98 nm (Figure 1B), consistent with the literature. EVs showed an enrichment in the exosomal marker CD63 and were negative for the Golgi-localised, γ-ear homology domain, ARF-binding protein (GGA1) (Figure 1C). EVs also contained acetylcholine esterase, as detected by a specific activity assay (Figure 1D). These results show that EVs had the expected size distribution and contained a large proportion of exosomes. Annexin A2 is a calcium-dependent membrane-binding protein. As such it is able to be removed from the membrane with calcium chelators, such as EDTA. To determine whether Annexin A2 is on EV surface, EVs were treated with EDTA for 30 min at 37. The supernatant was then separated from the EVs by ultracentrifugation, and Annexin A2 was detected by western blot. We found that Annexin A2 was present in the supernatant, which suggests its dissociation from the EV membrane upon EDTA treatment (Figure 1E). This was unlikely to be due to EV damage, as actin (present in the lumen of EVs) was not detectable in the EDTA supernatant (Figure 1E). Annexin A2 was also detectable in the EV pellet, thus indicating that it is present both in the lumen as well as on the surface of EVs (Figure 1E). To confirm this result, samples were subjected to mass spectrometry analysis; we observed a two-fold increase in the amount of Annexin A2 when EDTA was present (Figure 1F). These experiments were repeated with EVs isolated from mouse neural stem cells (NSCs) and led to similar results, indicating that the presence of Annexin A2 on EV surface is not restricted to one cell line (Figure 1G). A small amount of actin was also detected in the supernatant in both untreated and after EDTA, which could be due to some actin leaking from the EVs (Figure 1G). Nonetheless, we observed a clear-cut evidence with Annexin A2 that was found in EDTA supernatants only. In NSC experiments, we also used GAPDH as additional control, which was not present in supernatants so to confirm the integrity of EVs (Figure 1G). DOI: 10.19185/matters.201602000015 Matters (ISSN: 2297-8240) 3

To further confirm the presence of Annexin A2 on the surface of EVs, we used a protease protection assay. EVs were treated with trypsin with or without detergent for 30 min at 37 ; the EV pellet was then separated from the supernatant by ultracentrifugation and Annexin A2 was detected by western blot (Figure 1H). Annexin A2 was liable to tryptic digestion, further confirming its unpredicted presence on the surface of EVs. When detergent and trypsin were present, all the available Annexin A2 was digested to completion. This confirms that the Annexin A2 detected after tryptic digestion, both the full length and smaller products, were protected from cleavage. As an internal control, the blot was probed for actin, the vast majority of which remained intact after trypsin digestion, thus indicating the EVs were not damaged as a result. Following the current model for EV formation, cytosolic proteins should remain in the lumen of EVs. We report here the intriguing observation that the cytosolic protein Annexin A2 is present on the surface of EVs. How Annexin A2 is able to access the outer membrane of EVs remains unclear and represents a major gap in our understanding of protein trafficking that will require further investigation. It is known that a pool of Annexin A2 is found at the cell surface [8]. Therefore, it is possible that this surface pool of Annexin A2 is internalised during endocytosis upstream of EV biogenesis and that could explain the localisation of Annexin A2 on the surface of EVs. Similarly, microvesicles are formed by budding from cell surface and thus may also contribute to the pool of Annexin A2 found on the surface of EVs. However, as described above, Annexin A2 lacks a signal sequence for secretion and therefore should not be able to access the cell surface [9]. In this scenario, Annexin A2 would have to cross the plasma membrane via an unconventional protein trafficking pathway, a hypothesis that remains to be tested [10] [11] [12]. It would also be interesting to test the presence of other leaderless proteins on the surface of EVs to understand whether this observation represents a common feature of such leaderless proteins or is restricted to Annexin A2. In conclusion, we show for the first time that Annexin A2 has an unpredicted localisation on the surface of EVs. Additional Information Methods and Supplementary Material Please see https://sciencematters.io/articles/201602000015. This work was supported by Wellcome Trust Strategic Award [100574/Z/12/Z] and MRC Metabolic Diseases Unit [MRC_MC_UU_12012/5] from the Italian Multiple Sclerosis Association (AISM, grant 2010/R/31), the Italian Ministry of Health (GR08-7), the European Research Council (ERC) under the ERC-2010-StG Grant agreement n 260511-SEM_SEM, the UK Regenerative Medicine Platform Acellular hub (Partnership award RG69889), and core support grant from the Wellcome Trust and MRC to the Wellcome Trust Medical Research Council Cambridge Stem Cell Institute. FG is supported by a scholarship of the Gates Cambridge Trust. We thank Frances Richards (Cancer Research UK) for the PANC1 cell line and the CIMR/IMS Proteomics Facility. Ethics Statement Not applicable. Citations [1] Colombo Marina, Raposo Graça, and Théry Clotilde. Biogenesis, Secretion, and Intercellular Interactions of Exosomes and Other Extracellular Vesicles. In: Annual Review of Cell and Developmental Biology 30.1 (Oct. 2014), pp. 255 289. doi: 10.1146/annurev-cellbio-101512-122326. url: http://dx.doi.org/10.1146/annurevcellbio-101512-122326. [2] G. Raposo and W. Stoorvogel. Extracellular vesicles: Exosomes, microvesicles, and friends. In: The Journal of Cell Biology 200.4 (Feb. 2013), pp. 373 383. doi: 10.1083/jcb.201211138. url: http://dx.doi.org/10.1083/jcb.201211138. [3] Alessandra Lo Cicero, Philip D Stahl, and Graça Raposo. Extracellular vesicles shuffling intercellular messages: for good

or for bad. In: Current Opinion in Cell Biology 35 (Aug. 2015), pp. 69 77. doi: 10.1016/j.ceb.2015.04.013. url: http: //dx.doi.org/10.1016/j.ceb.2015.04.013. [4] Chiara Cossetti et al. Extracellular Vesicles from Neural Stem Cells Transfer IFN-γ via Ifngr1 to Activate Stat1 Signaling in Target Cells. In: Molecular Cell 56.2 (Oct. 2014), pp. 193 204. doi: 10.1016/j.molcel.2014.08.020. url: http: //dx.doi.org/10.1016/j.molcel.2014.08.020. [5] Jian Zhang et al. Exosome and Exosomal MicroRNA: Trafficking, Sorting, and Function. In: Genomics and Proteomics and Bioinformatics 13.1 (Feb. 2015), pp. 17 24. doi: 10.1016/j.gpb.2015.02.001. url: http: //dx.doi.org/10.1016/j.gpb.2015.02.001. [6] Alamelu Bharadwaj et al. Annexin A2 Heterotetramer: Structure and Function. In: IJMS 14.3 (Mar. 2013), pp. 6259 6305. doi: 10.3390/ijms14036259. url: http://dx.doi.org/10.3390/ijms14036259. [7] Volker Gerke, Carl E. Creutz, and Stephen E. Moss. Annexins: linking Ca2+ signalling to membrane dynamics. In: Nature Reviews Molecular Cell Biology 6.6 (June 2005), pp. 449 461. doi: 10.1038/nrm1661. url: http://dx.doi.org/10.1038/nrm1661. [8] Hina Kalra et al. Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation. In: PLoS Biology 10.12 (Dec. 2012), e1001450. doi: 10.1371/journal.pbio.1001450. url: http: //dx.doi.org/10.1371/journal.pbio.1001450. [9] Doyle A. Siever and Harold P. Erickson. Extracellular annexin II. In: The International Journal of Biochemistry and Cell Biology 29.11 (Nov. 1997), pp. 1219 1223. doi: 10.1016/s1357-2725(97)00057-5. url: http://dx.doi.org/10.1016/s1357-2725(97)00057-5. [10] Marcus C.S. Lee et al. BI-DIRECTIONAL PROTEIN TRANSPORT BETWEEN THE ER AND GOLGI. In: Annual Review of Cell and Developmental Biology 20.1 (Nov. 2004), pp. 87 123. doi: 10.1146/annurev.cellbio.20.010403.105307. url: http://dx.doi.org/10.1146/annurev. cellbio.20.010403.105307. [11] C. Rabouille, V. Malhotra, and W. Nickel. Diversity in unconventional protein secretion. In: Journal of Cell Science 125.22 (Nov. 2012), pp. 5251 5255. doi: 10.1242/jcs.103630. url: http://dx.doi.org/10.1242/jcs.103630. [12] Mar ia Lizarbe et al. Annexin-Phospholipid Interactions. Functional Implications. In: IJMS 14.2 (Jan. 2013), pp. 2652 2683. doi: 10.3390/ijms14022652. url: http://dx.doi.org/10.3390/ijms14022652. [13] M. Zhang and R. Schekman. Unconventional Secretion, Unconventional Solutions. In: Science 340.6132 (May 2013), pp. 559 561. doi: 10.1126/science.1234740. url: http://dx.doi.org/10.1126/science.1234740. [14] Michael Lieber et al. Establishment of a continuous tumor-cell line (PANC-1) from a human carcinoma of the exocrine pancreas. In: International Journal of Cancer 15.5 (May 1975), pp. 741 747. doi: 10.1002/ijc.2910150505. url: http://dx.doi.org/10.1002/ijc.2910150505. 5