HYPERSPECTRAL BIOFILM CLASSIFICATION ANALYSIS TO DETERMINE CARRYING CAPACITY FOR MIGRATORY BIRDS IN THE SOUTH BAY SALT PONDS
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1 HYPERSPECTRAL BIOFILM CLASSIFICATION ANALYSIS TO DETERMINE CARRYING CAPACITY FOR MIGRATORY BIRDS IN THE SOUTH BAY SALT PONDS We-Chen Hsu, Unversty of Calforna at Berkeley Amber Kuss, San Francsco State Unversty Tyler Ketron, Stanford Unversty Andrew Nguyen, Calforna State Unversty, East Bay Alex Remar, Unversty of Delaware Mchelle Newcomer, San Francsco State Unversty J.W. Skles PhD, NASA Ames Research Center NASA Ames Research Center Aprl 1,
2 Appled Scences Related to South San Francsco Bay Ecologcal Forecastng Communty Concerns Provde habtat for endangered anmal and vegetaton speces Increase Shorebrd habtats for foragng and mgraton Understand changes n vegetaton colonzaton of marsh habtat durng the restoraton process. Partners Ecologcal Forecastng US Geologcal Survey San Francsco Estuary Insttute Water Resources US Fsh and Wldlfe Servce Calforna Department of Fsh and Game Decson Makng Process & Partner Needs San Francsco Bay Conservaton and Development Commsson Use NASA satellte data to map the spatal dstrbuton and densty of boflm. Need for mproved understandng of boflm s role wthn the South San Francsco Bay s wetland ecosystem. Scence Advsors Erch Flemng, Ph.D SETI Insttute, NASA Ames Research Center Brad Bebout, Ph.D NASA Ames Research Center Lesle Bebout, Ph.D NASA Ames Research Center Angela Detweler NASA Ames Research Center 2
3 Project Objectves and Study Area Objectves Use GER-1500 spectroradometer to create Spectral Lbrary of Boflm Montor the spatal dstrbuton and densty of boflm throughout the South Bay Provde a taxonomc classfcaton of the domnant boflm speces n the South San Francsco Bay Area Estmate the South Bay Salt Pond Restoraton Area s carryng capacty of shorebrds Study Area 3
4 Feld and Laboratory Methodology Speces Classfcaton GER Measurements Chlorophyll a Analyss 4
5 Remote Sensng Methodology Sensor Landsat 5 TM IKONOS Hyperon on EO-1 Purpose Detect Vegetaton Detect Vegetaton Obtan spectral curve for boflm Bands Used Wavelengths (µm) Resoluton (m) Dates used 8/18/94, 8/22/07, 8/27/09, 7/5/10 Image Source Glovs (USGS, 2010a) ,2009 GeoEye 30 3/26/10, 7/7/10 Glovs (USGS, 2010a) EO-1 Hyperon L1R Atmospherc Correcton FLAASH Georectfcaton Hyperon Classfcaton procedure cos 1 n n x 2 x y n y 2 Spectral Angle Mapper Classfcaton Algorthm Where: n = number of bands α = angle formed between reference spectrum and mage spectrum x = mage spectrum y = reference or target spectrum Spectral Lbrary ERDAS IMAGINE 5
6 Feld and Laboratory Lab Results 90.00% Percent Dstrbuton of Man Taxonomc Speces 80.00% 70.00% 60.00% 50.00% 40.00% Low Densty Medum Densty Hgh Densty 30.00% 20.00% 10.00% 0.00% Navcula spp. Gyrosgma fascola-type Gyrosgma acumnatum-lke Cylndrotheca closterum-lke Cylndrotheca fussorms Gyrosgma spp. H = Hgh Densty Boflm M = Medum Densty Boflm L = Low Densty Boflm 32 = Baysde 34 = Pondsde 6
7 Remote Sensng Results Hyperon Classfcaton-Spectral Angle Mapper ARC Total Area of Boflm 28,641,600 m 2 7
8 Remote Sensng Results Landsat NDVI Nne Landsat Images mappng the lkelhood of boflm presence June, 2006 through July, 2010 Lkelhood = Appearance ARC Klometers 8
9 Carryng Capacty Results Carryng Capacty = A B C D Where: A = Area of Boflm (m 2) B = Boflm Bomass (g C/ m 2 ) D = Boflm Energy Densty (kj/g) C = Brd Consumpton Rate of Boflm (kj/d brd) Boflm on Marshland Boflm n the South Bay Salt Pond Restoraton Area, alone, can feed 200,000 (± 25,000) shorebrds per day! 9
10 South San Francsco Bay Ecologcal Forecastng Conclusons Boflm has a dstngushed spectral sgnature, whch can be dentfed n satellte magery. Boflm appears to floursh n tdal, bay-sde mudflats where vegetaton s unable to grow, such as recently rehabltated salt ponds. The domnant boflm genus n the South San Francsco Bay Area s Navcula. Boflm n the South Bay Salt Pond Restoraton Area, alone, can feed 200,000 (± 25,000) shorebrds per day! Boflm Densty Hgh Low Pond A6 Pond A Klometers Unprocessed Image Hyperon-Classfed Image 10
11 Transton to Partner Partners: US Geologcal Survey San Francsco Estuary Insttute US Fsh and Wldlfe Servce Benefts to Partner: Calforna Department of Fsh and Game San Francsco Bay Conservaton and Development Commsson Spectral lbrary of varous boflm denstes. Maps of boflm densty and spatal dstrbuton. Estmated carryng capacty of South San Francsco Bay for shorebrds. Use remote sensng nstead of feld crew 11
12
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