/. Blochem. 97, (1985)

Size: px
Start display at page:

Download "/. Blochem. 97, (1985)"

Transcription

1 /. Blochem. 97, (1985) A Method for Systematic Purification from Bovine Plasma of Six Vitamin K-Dependent Coagulation Factors: Prothrombin, Factor X, Factor IX, Protein S, Protein C, and Protein Z 1 Nobukazu HASHIMOTO, 1 Takashi MORITA,' and Sadaaki IWANAGA Department of Biology, Faculty of Science, Kyushu University 33, Higashi-ku, Fukuoka, Fukuoka 812 Received for publication, November 5, 1984 A systematic purification scheme is presented for the isolation of six vitamin K- dependent coagulation factors from bovine plasma in a functionally and biochemically pure state. The vitamin K-dependent proteins concentrated by the ordinary barium citrate adsorption were first separated into four fractions, fractions A, B, C, and D, by DEAE-Sephadex A-50 chromatography. From the pooled fraction A, protein S, factor IX, and prothrombin were purified by column chromatography on Blue-Sepharose CL-6B. Heparin-Sepharose chromatography of the pooled fraction B provided mainly pure factor IX, in addition to homogeneous prothrombin. A high degree of resolution of protein C and prothrombin from the pooled fraction C was obtained with a Blue-Sepharose column. This dye-ligand chromatographic procedure was also very effective for the separation of protein Z and factor X contained in the pooled fraction D. Thus, these preparative procedures allowed high recovery of milligram and gram quantities of six vitamin K-dependent proteins from 15 liters of plasma in only two chromatographic steps, except for protein S, which required three (the third step was rechromatography on Blue-Sepharose CL-6B). Prothrombin, factor X, factor IX, and factor VII are well-known plasma serine protease zymogens, all of which are major components associated closely with the blood coagulation pathway (/). All the factors have now been isolated and their whole amino acid sequences, except for that of factor VII, have been established (2). Recently, three additional vitamin K-dependent proteins, designated as protein C (3), protein S (4), and protein Z (5), have been isolated and their physio- 1 This study was supported in part by a Grant-in-Aid for Scientific Research from the Ministry of Education, Science and Culture of Japan. 1 Current address: Nihon Medi-Physics Co., Ltd., Takarazuka, Hyogo 665. To whom correspondence should be addressed. Abbreviations: MCA, 4-methylcoumaryl-7-amide; Boc, N-rm-butoxycarbonyl, SDS, sodium dodecyl sulfate; DFP, di/sopropyl phosphorofluoridate; Gla, jmarboxyglutamic acid; PT, prothrombin; PAGE, polyacrylamide gel electrophoresis. Vol. 97, No. 5,

2 1348 N. HASHIMOTO, T. MORITA, and S. IWANAGA logical functions and whole primary structures are being studied. Over the past decade, efforts have focused mainly upon the structure-function relationships of these clotting factors (2). However, it now seems important to investigate the functional role of individual clotting factors in the reaction sequence of the blood coagulation cascade, using a reconstitution system in the presence of accessory components, such as Ca >+, phospholipids and protein cofactors. As a prerequisite for these studies, simpler and more efficient methods for the preparation of milligram quantities of functionally active and biochemically well-characterized clotting factors are essential. The purpose of this work was to establish a purification method for multiple vitamin K-dependent proteins from a single pool of bovine plasma. Although several methods have been elaborated for the preparation of one or at most two pure clotting factors in fair yield (7, 2), there is no protocol for the systematic purification of multiple components with high resolution and high yield from a single pool of plasma. We describe here our procedures for purifying six vitamin K-dependent proteins and demonstrate the usefulness of dye ligand chromatography for the separation of protein C and protein Z. MATERIALS AND METHODS Materials DEAE-Sephadex A-50 and Blue- Sepharose CL-6B were products from Pharmacia Fine Chemicals, Uppsala. Boc-Leu-Ser-Thr-Arg- MCA was purchased from the Protein Research Foundation, Minoh, Osaka. DFP was from Katayama Chemical Co., Osaka. Heparin (152 units/ mg) was a product of Nakarai Chemical Ltd., Kyoto. y-carboxyglutamic acid (Bachem. AG, Switzerland) was a kind gift from Dr. J. Stenflo, Department of Clinical Chemistry, University of Lund, Malmo, Sweden. All other chemicals were of the highest quality available. Hepann-Sepharose CL-6B was prepared by the method of March et al. (6). Benzamidine-CH-Sepharose was prepared by coupling CH-Sepharose (Pharmacia Fine Chemicals) with /vaminobenzamidine in the presence of l-ethyl-3-(3-dimethylamino propyl)carbodiimide (Protein Research Foundation) (7). Bovine a-thrombin (3,500 NTH units/mg, 93 % titrable by /i-nitrophenyl />'-guanidinobenzoate) was isolated by benzamidine-ch-sepharose and SP-Sephadex C-50 chromatographies from the activation mixture of bovine prothrombin activated with bovine factor Xa (#). The factor X-activating coagulant protein (RW-XCP) that activates factor IX was purified to homogeneity from Russell's viper venom by the method of Kisiel et al. (9). Insoluble RW-XCP beads were made by coupling purified RW-XCP with Affigel 10 (Bio-Rad Laboratories, Richmond, California). Factor TKafl was prepared from factor LX by converting factor LX to factor IXa/S with insoluble RW-XCP at 37 C for 2 h in the presence of 10 mm CaQj. Factor LXa/? was purified to homogeneity by gel filtration on Sephacryl S-200 (70). Bovine factor Xa was isolated by gel filtration on Sephadex G-100 from the activation mixture of factor X by RW-XCP (77). The activation of protein C was conducted by the the same method as that of Ohno et al. (72). Measurement of Protein Concentration For purified preparations, protein concentrations were determined by absorbance measurement, employing,4^=15.5 for prothrombin (13); 12.4 for factor X (70; 14.9, for factor LX (75); 14.3 for factor IXa/3 (75); 13.7 for protein C (76); and 10.0 for proteins S (77). The concentration of protein Z was calculated by assuming an Agfa of 10. Measurement of Activity of Clotting Factors The activity of the activated protein C or factor Xa was measured as reported previously by using Boc-Leu-Ser-Thr-Arg-MCA or Boc-Ile-Glu-Gly- Arg-MCA, respectively, as a substrate (72, 18). A one-stage assay based on the partial thromboplastin time was used for the measurement of factor IX (19). One unit of factor IX activity was defined as the amount found in 1 ml of normal bovine plasma. The clotting activity of factor IXa^ was measured by the method of Fujikawa et al. (IS). Prothrombin was assayed by a twostage method (20). SDS-Polyacrylamide Gel Electrophoresis Electrophoresis on 8 % gel in the presence of SDS was performed by the method of Weber and Osbora (27). The gels were stained with Coomassie brilliant blue R-250. Concentration and Storage of Protein Large volumes of protein solutions (up to 1 liter) were concentrated by using Amicon ultrafiltration cells with PM 10 membranes and stored at -80 C. /. Bwchem.

3 PURIFICATION OF SIX VITAMIN K-DEPENDENT COAGULATION FACTORS 1349 Ammo Acid and NH t -Terminal Sequence Analyses Samples were hydrolyzed in 5.7 M HO in evacuated, sealed Pyrex tubes at 110 C for 24, 48, and 72 h. The analyses were performed with a Hitachi amino acid analyzer, model , by the method of Spackman (22). Tryptophan content was determined in hydrolyzates with 4 M methanesulfonic acid at 110 C for 24 h {23). y-carboxyglutamic acid content of protein S and protein Z was determined by the method of Fernlund et al. (24), using hydrolyzates of 2 to 3 nmol of protein in 100 //I of 3.75 M NaOH for 24 h at 110 C. The hydrolysate was neutralized by adding 100/d of 4 M HC1, lyophilized, dissolved in 0.2 M sodium citrate, ph 1.0, and analyzed on an amino acid analyzer. The NHj-terminal amino acid was determined by the manual Edman method, as described in detail previously (25). Purification Procedure General Approach and Methodology The purification scheme for six vitamin K-dependent proteins is described in two sections according to the flow sheet shown in Fig. 1. All procedures were performed at 4 C unless otherwise indicated. The conductivity of buffers and solutions was measured at 0 C. The data presented refer to the preparation of proteins from 15 liters of plasma. Preparation of Vitamin K-Dependent Protein Concentrate from Bovine Plasma Fresh bovine blood was collected at the slaughterhouse in polyethylene bottles and mixed with one-tenth volume of 0.11 M sodium citrate containing benzamidine- Sup Sup HC1 (1 g per liter). The blood was transported to the laboratory within an hour and centrifuged at 4,000 rpm for 20 min, using a Sorvall RC-3 centrifuge. Barium citrate adsorption was performed by a procedure similar to that of Moore et al. (26). One-tenth volume of 1.0 M barium chloride was added slowly to the plasma. The suspension was stirred gently for 60 min and centrifuged at 4,000 rpm for 10 min. The precipitate was washed with 0.1 M NaCl containing 0.01 M barium chloride, 1 mm benzamidine-hcl and 0.02 % NaN 3, and centrifuged again. The washing procedure was repeated twice. The washed barium citrate precipitate was suspended in I liter of 40% saturated ammonium sulfate solution. DFP was added to the solution to give a final concentration of 1 mm. The suspension was stirred at 4 C overnight. The precipitate was removed by centrifugation at 5,000 rpm for 30 min, and the supernatant was fractionated by adding saturated ammonium sulfate solution to give 67% saturation. The precipitate was collected by centrifugation at 5,000 rpm for 30 min in a Sorvall RC-3 centrifuge. The sediment was dissolved in ml of 0.05 M sodium phosphate buffer, ph 6.0, containing 0.2 M NaCl, 1 mm DFP, and 1 mm benzamidine-hcl, and dialyzed overnight against 20 liters of 0.05 M sodium phosphate buffer, ph 6.0, containing 0.2 M NaCl and 1 mm benzamidine-hcl. Insoluble material produced during dialysis was removed by centrifugation, and the clear supernatant solution was used as vitamin K-dependent protein concentrate. Cltrated plasma I Barium citrate precipitate Washing t elutlon with 40 * (NH <J 2SO 4 Sup I 67 * Fraction A Fraction B Blue- IHeparln- Sepnarose sephorose Ppt Ppt, saturation DEAE-Sephadex A-50 Fraction C IBUie- Sepnarose Protein S F. IX PT PT F. IX Protein C PT l Fraction D IBlue- I Septwros* F. X Protein Z Fig. 1. A systematic scheme for purification of bovine vitamin K-dependent proteins. The detailed procedures are described in the text. Sup, supernatant; Ppt, precipitate; F. IX, factor IX; PT, prothrombin; F. X, factor X. Vol. 97, No. 5, 1985

4 1350 N. HASHIMOTO, T MORITA, and S DEAE-Sephadex A-50 Chromatography The vitamin K-dependent protein concentrate (total absorbance at 280 nm = 4,760) obtained above was applied to a column (3.5 x 22 cm) of DEAESephadex A-50, equilibrated with 0.05 M sodium phosphate buffer, ph 6.0, containing 0.2 M NaCl and 1 mm benzamidine-hcl. After washing of the column with 1.5 liters of the equilibration buffer, linear salt gradient elution was performed with 1 liter each of the equilibration buffer and the same buffer containing 0.6 M NaCl. The flow rate was 90 ml per h and 16 ml fractions were collected. The elution profile is shown in Fig. 2. These fractions were pooled as indicated by solid bars and samples taken from the pooled fractions A, B, C, and D were subjected to SDS-PAGE. Fraction A contained the major portion of factor JX and protein S besides prothrombin. Fraction B contained mainly electrophoretically pure prothrombin, although factor IX activity was detectable in the same fraction. Fraction C contained mainly protein C, in addition to prothrombin. As shown in the inset to Fig. 2, two protein bands, which appeared to be a heavy chain and a light chain derived from protein C, were detected on reduced SDS-PAGE. The existence of protein C in fraction C was also confirmed by measuring the amidase activity of activated protein C towards Boc-Leu-Ser-Thr-Arg-MCA, after treatment with a-thrombin (12). On this column chromatography, factor X and protein Z were eluted in fraction D. Since protein Z does not show any enzyme activity, its detection was based on the electrophoretic behavior on reduced SDS-PAGE. As shown by line D in Fig. 2, a single protein band, which did not show any mobility change on unreduced and reduced SDS-PAGE, was detected, and this band was presumed to be protein Z. On reduced SDSPAGE (line D in Fig. 2), factor X yielded two protein bands as expected, which seemed to correspond to the heavy and light chains. B C D Isolation of Protein S and Factor IX from the Pooled Fraction A The pooled fraction A (Total /<280=744) obtained from the DEAE-Sephadex A-50 column was dialyzed overnight against 0.05 M Tris-HCl buffer, ph 7.4, containing 0. 1 M NaCl and 1 mm benzamidine, and applied to a column (2.8 x 25 cm) of Blue-Sepharose CL-6B, equilibrated with the buffer used for dialysis. The column was washed with the same buffer until PT 8 E 8 30 g E > o c o o < J o <-> s ~ 125 Fr No (I6ml/tub«) 150 Fig. 2. DEAE-Sephadex A-50 column chromatography of vitamin K-dependent protein concentrate. Details of the procedure and described in the text. The fractions A, B, C, and D indicated by solid bars were collected. The SDS-PAGE patterns of these pooled fractions and prothrombin (PT) used as a reference are shown in the insert. J. Biochem. A 15 IWANAGA

5 PURIFICATION OF SIX VITAMIN K-DEPENDENT COAGULATION FACTORS 1331 the absorbance at 280 nm of the breakthrough fraction (fraction a) reached a plateau (less than 0.1), then a small amount of factor IX, in addition to prothrombin, was eluted into fractions b 4 and c by 0.05 M Tris-HCl buffer, ph 7.4, containing 1 mm benzamidine and 4 M NaCI (Fig. 3A). The arrow in Fig. 3A indicates a change to elution buffer containing 4 M NaCI. This chromatographic procedure was essentially the same as that briefly reported for the preparation of protein S by Stenflo and Jonsson (27). However, they have not reported the chromatographic patterns in detail. On this column, protein S together with factor IX was eluted in the breakthrough fraction (fraction a) by the equilibration buffer, as shown in Fig. 3A. This procedure was repeated once to further purify the protein S and to separate factor IX (Fig. 3B). The pooled fraction a (Total A tso =\38) was applied to an identical column as shown in Fig. 3A. After the column had been washed with 0.05 M * The isolation of factor IX from fraction b was not performed, as its amount was so small m - O b C PT a *b i» \ e Fr. No. (8ml/tube) A 100 Tris-HCl, I mm benzamidine, ph 7.4, until the eluate showed an absorbance of less than 0.1 at 280 nm, factor IX was eluted by 0.05 M Tris-HCl buffer, ph 7.4, containing 1 mm benzamidine and 4 M NaCI at the position indicated by an arrow in Fig. 3B. Through these procedures, electrophoretically pure protein S, factor IX, and prothrombin were isolated in fractions d, e, and c, respectively. The fractions indicated by solid bars in Fig. 3B were pooled and concentrated. Isolation of Factor IX and Prothrombin from the Pooled Fraction B Factor IX and prothrombin were isolated from the pooled fraction B by using heparin-sepharose chromatography according to the method of Fujikawa et al. (19). The conditions and elution buffer used for the purification were identical with those described previously (19). Through these procedures, electrophoretically pure factor IX and prothrombin were recovered in good yield and in a functionally pure state. Isolation of Protein C from the Pooled Fraction C It is known that DEAE-Sephadex A-50 chromatography of the vitamin K-dependent protein 10 Q5 -- i -> 1 i rd i, Fr. No. (8 ml/tube) Fig. 3. Isolation of protein S from the pooled fraction A on a Blue-Sepharose CL-6B column. Details of the procedure are described in the text. A: The chromatogram for the pooled fraction A. B: The rechromatogram for the breakthrough fraction (fraction a). The fractions a, b, c, d, and e indicated by solid bars were collected. The SDS-PAGE patterns of these fractions are shown in the insert. e B 100 Vol. 97, No. 5, 1985

6 1352 N. HASHIMOTO, T. MORITA, and S. IWANAGA II Fr. No. (78ml/tube) Fig. 4. Isolation of protein C from the pooled fraction C on a Blue- Sepharose CL-6B column. Details of the procedure are described in the text. The fractions indicated by a solid bar were collected. The SDS- PAGE patterns of samples taken from fraction Nos. 30 (gel 1) and 120 (gel 2) are shown in the insert. concentrate can resolve protein C and prothrombin. However, the resolution is not very reproducible. We succeeded here in establishing a procedure for the isolation of protein C from the pooled fraction C, using a Blue-Sepharose CL-6B column. The pooled fraction C (Total /4 18O = 116) was first dialyzed overnight against 0.05 M imidazole-hcl buffer, ph 6.3, containing I ITIM benzamidine, and then applied to a column (2.8 x 25 cm) of Blue-Sepharose CL-6B, equilibrated with the same imidazole buffer. After washing of the column with 300 ml of the equilibration buffer, proteins were eluted with a linear gradient formed from 250 ml each of the same buffer and buffer containing 1 M NaCl, and 7.8 ml fractions were collected at a flow rate of 115 ml per h. The elution profile is shown in Fig. 4. The bulk of protein C was eluted in the breakthrough fraction and separated completely from prothrombin, as judged from the SDS-PAGE patterns of these components (shown in the inset to Fig. 4). Moreover, the protein C preparation thus isolated did not show any activity of factor IX or prothrombin, when the concentration of 0.1 mg per ml was used for the assay. Separation of Factor X and Protein Z from the Pooled Fraction D As described previously, the protein Z-containing fractions from the DEAE- Q4 02 O a 1 \ - a I/ - b i IM MOCJ / Fr. No. ( &5ml/tube) 20: Fig. 5. Separation of factor X and protein Z from the pooled fraction D on a Blue-Sepharose CL-6B column. Details of the procedure are described in the text. The fractions indicated by solid bars were collected. The SDS-PAGE patterns of these fractions are shown in the insert. Sephadex A-50 column overlapped with factor X. For separation of these components, a Blue-Sepharose CL-6B column was very effectively, as shown in Fig. 5. The pooled fraction D (total A 130 =! s o J. Biochem.

7 PURIFICATION OF SIX VITAMIN K-DEPENDENT COAGULATION FACTORS 1353 TABLE I. Summary of yield of vitamin K-dependent proteins from 15 liters of bovine plasma. values obtained from 3 experiments are shown. Component Fraction A Fraction B Fraction C Fraction D Yield (range) (mg) Protein S Factor IX ,300 1,600 Prothrombin Protein C Protein Z ) was dialyzed overnight against 0.05 M imidazole-hci buffer, ph 6.3, containing 1 rrim benzamidine, and applied to the column (1.6 x 16 cm) equilibrated with the buffer used for dialysis. After washing of the column with 100 ml of the equilibration buffer containing 0.1 M NaCI, proteins were eluted with a linear gradient formed from 100 ml each of the equilibration buffers containing 0.1 M and 0.7 M NaCI, and 8.5 ml fractions were collected at a flow rate of 72 ml per h. Through this procedure, the bulk of factor X was recovered in the breakthrough fraction, and protein Z, which showed a single band on both unreduced and reduced SDS-PAGE, was found in the adsorbed fraction. These fractions were pooled and concentrated. S IX PT C X Z Fig. 6. SDS-PAGE patterns of purified proteins. Approximately 10//g each of protein S (S), factor IX (IX), prothrombin (PT), protein C (C), factor X (X), and protein Z (Z) were subjected to SDS-PAGE. A summary of the overall yield (mg) of each component obtained from 15 liters of a single plasma pool is shown in Table I. The recovery of the various components isolated by the present method ular weights estimated under reducing conditions was reasonable as compared with those obtained were in good agreement with previously reported by reported methods for the individual purification values (/, 2). Protein S showed two bands, as of each component (3-5, 13, 14, 17, 19). All the reported by Stenflo and Jonsson (27). One of the steps mentioned above were repeated several times two bands is now known to be a hydrolysis produsing 15 to 20 liters of plasma and the results were uct, formed by limited proteolysis of the polypepfound to be reproducible. tide chain by a-thrombin or other plasma serine Homogeneity and Physicochemical Characteri- proteases during the purification procedure (28zation of the Purified Proteins The purified prep- 30). Our preparation of protein S cross-reacted arations of protein S, factor IX, prothrombin, with anti-bovine protein S antibody, when an protein C, factor X, and protein Z were subjected Ouchterlony test of the purified material was perto SDS-PAGE analysis. Under nonreducing conformed (data not shown). The specific activity of ditions, the isolated proteins except for protein S purified prothrombin was 1,200 NIH units per mg each gave a single band. Moreover, their molec- protein. The preparations of activated protein C Vol. 97, No. 5, 1985 Factor X RESULTS AND DISCUSSION The average

8 1354 N. HASHIMOTO, T MOR1TA, and S. JWANAGA and factor Xa had the same amidase activities as described in the literature (12, 18). Using the reported assay method (15), the preparation of factor IXa at 10ng/0.4ml of the assay mixture gave clotting times of s, compatible with that described by Fujikawa et al. (15). In Table II, the amino acid composition of the isolated protein Z is shown, in comparison with that recently reported by Petersen et al. (S). There were no major differences in amino acid composition between the two preparations. Moreover, the NH,-terminal tetrapeptide sequence, H- Ala-Gly-Ser-Tyr-, of the isolated protein Z was TABLE II Amino acid composition of protein Z. Amino acid Gla Asp Thr Ser Glu h Pro Gly Ala 1/2Cys Val Met lie Leu Tyr Phe Lys His Arg Trp Protein Z E 12.6" Residues per molecule N.D.i C s Protein Z>> 12.0' * Calculated from extrapolated or average values estimated on samples of 24, 48, and 72 h hydrolysates. Those for protein Z were calculated on the basis of 30 mol of aspartic acid/molecule. b Taken from the data of Petersen et al. (5). c 72 h hydrolysis value d Not determined. Calculated relative to aspartic acid by analysis of the alkaline hydrolyzate f Calculated relative to leucine (5). s Determined by the methanesulfonic acid method. h The glutamic acid content includes glutamine and y-carboxyglutamic acid. the same as that reported in the literature (5). The amino acid compositions of other components isolated here were also determined (data not shown) and the compositions were in good agreement with those of prothrombin (13), factor IX (19), factor X (14), protein S (IT), and protein C (3) described in the literature. In this work, we have extensively employed Blue-Sepharose chromatography. There are two reports that describe the purification of human factor X on blue-dextran agarose (31) and the interaction of prothrombin, factor IX, and factor VII with dextran-blue (32). The Blue-Sepharose column used to purify protein S from the pooled fraction A was similar to that described in the literature (27). We found here that this column was also very useful for the separation of protein C from the prothrombin-containing fraction and protein Z from the factor X-containing fraction. The isolation of these components from the DEAE- Sephadex A-50 pool was accomplished with only one additional step, except in the case of protein S. Thus, the method for the preparation of protein C and protein Z has been greatly improved in comparison with the previous method, in which a long column of DEAE-Sepharose and a rechromatography step were required for the isolation of these components from the DEAE-Sephadex A-50 pool (3, 5). The availability of this protocol for purification should facilitate further studies on the functional role of these proteins in the coagulation cascade. We wish to express our thanks to Dr. J Stenflo, University of Lund, Malmo, Sweden, for providing y- carboxyglutamic acid and identifying our protein S preparation immunologically. The assistance of Mrs. Sono Ezaki-Hashimoto in amino acid analysis is much appreciated. We also thank Miss Mizumo Akiyoshi for her expert secretarial assistance. REFERENCES 1. Davie, EW & Fujikawa, K. (1975) AMU. Rev. Biochem. 44, Jackson, CM. & Nemerson, Y. (1981) Annu Rev. Biochem. 49, Stenflo, J. (1976) J Biol. Chem. 251, DiScipio, R G, Hermodson. M.A., Yates, S.G., & Davie, E.W. (1977) Biochemistry 16, Peterson, T E, Thogersen, H.C., Sottrup-Jensen, L., Magnusson, S., & Jbrnvall, H. (1980) FEBS Lett. 114, J. Biochem.

9 PURIFICATION OF SIX VITAMIN K-DEPENDENT COAGULATION FACTORS March, S.C., Parikh, I., & Cuatrecasas, P. (1974) Anal. Biochem. 60, Holmberg, L., Bladh, B., & Astedt, B. (1976) Biochem. Biophys. Ada 445, Morita, T., Nishibe, H., Iwanaga, S., & Suzuki, T. (1974) /. Biochem. 76, Kisiel, W., Hermodson, M.A., & Davie, E.W. (1976) Biochemistry 15, 4901^ Amphlett, G.W., Byrne, R., & Castellino, F.J. (1979) /. Biol. Chem. 254, Morita, T. & Jackson, CM. (1980) in Vitamin K Metabolism and Vitamin K-Dependent Proteins (Suttie, J.W., ed) pp , University Park Press, Baltimore 12 Ohno, Y., Kato, H., Monta, T., Iwanaga, S., Takada, K., Sakakibara, S., & Stenflo, J. (1981) /. Biochem. 90, Owen, W.G., Esmon, C.T., & Jackson, C M. (1974) /. Biol. Chem. 249, Jackson, CM. & Hanahan, D. (1968) Biochemistry 7, 4506^ Fujikawa, K., Legaz, M.E., Kato, H., & Davie, E. (1974) Biochemistry 13, 4508-^ Kisiel, W., Ericsson, L.H., & Davie, E.W. (1976) Biochemistry 15, DiScipio, R.G. & Davie, E.W. (1979) Biochemistry 18, Monta, T., Kato, H., Iwanaga, S., Takada, K., Kimura, T., & Sakakibara, S. (1977) /. Biochem. 82, Fujikawa, K., Thompson, A.R., Legaz, M.E., Meyer, R G., & Davie, E.W. (1973) Biochemistry 12, Magnusson, S. (1970) Methods Enzymol. 19, Weber, K. & Osborn, M. (1969) /. Biol. Chem. 244, 4406^ Spackman, D.H., Stein, W.H., & Moore, S. (1958) Anal. Chem. 30, Simpson, R.J., Neuberger, M., & Liu, T.-Y. (1976) J. Biol. Chem. 251, Fernlund, P., Stenflo, J., Roepstorff, P., & Thompsen, J. (1975) /. Biol. Chem. 250, Edman, P. (1970) in Protein Sequence Determination (Needleman, S.B., ed.) pp , Springer-Verlag, Berlin 26. Moore, H.C., Lux, S.E., Malhotra, O.P., Bakerman, S., & Carter, J.R. (1965) Biochim. Biophys. Ada 111, Stenflo, J. & Jonsson, M. (1979) FEBS Lett. 101, Morita, T. & Iwanaga, S. (1982) Metabolism Disease (in Japanese) 19, Dahlback, B. (1983) Biochem. J. 209, Morita, T., Mizuguchi, J., & Iwanaga, S. /. Biochem. submitted 31. Vician, L. & Tishkoff, G H (1976) Biochim. Biophys. Ada 434, Schwart, A.C. & Hemker, H.C. (1970) Biochim. Biophys. Ada 222, Vol. 97, No. 5, 1985

Chapter PURIFICATION OF ALKALINE PROTEASES

Chapter PURIFICATION OF ALKALINE PROTEASES Chapter PURIFICATION OF ALKALINE PROTEASES E /xtracellular alkaline proteases produced by Bacillus sp. K 25 and bacillus pumilus K 242, were purified and the homogeneity was examined by electrophoresis.

More information

SUPPLEMENTARY MATERIAL

SUPPLEMENTARY MATERIAL SUPPLEMENTARY MATERIAL Purification and biochemical properties of SDS-stable low molecular weight alkaline serine protease from Citrullus Colocynthis Muhammad Bashir Khan, 1,3 Hidayatullah khan, 2 Muhammad

More information

Isolation of a protein Z-dependent plasma protease inhibitor

Isolation of a protein Z-dependent plasma protease inhibitor Proc. Natl. Acad. Sci. USA Vol. 95, pp. 9250 9255, August 1998 Biochemistry Isolation of a protein Z-dependent plasma protease inhibitor XIN HAN, RYAN FIEHLER, AND GEORGE J. BROZE, JR.* Division of Hematology,

More information

Activation of Factor IX by the reaction product of tissue factor and

Activation of Factor IX by the reaction product of tissue factor and Proc. Natl. Acad. Sci. USA Vol. 74, No. 12, pp. 5260-5264, December 1977 Biochemistry Activation of Factor IX by the reaction product of tissue factor and Factor VII: Additional pathway for initiating

More information

Regulation of Activated Protein C by Thrombin-Modified Protein S1

Regulation of Activated Protein C by Thrombin-Modified Protein S1 J. Biochem. 94, 699-705 (1983) Regulation of Activated Protein C by Thrombin-Modified Protein S1 Koji SUZUKI,2 Junji NISHIOKA, and Senichiro HASHIMOTO Department of Laboratory Medicine of Medicine, Tsu,

More information

Nature Methods: doi: /nmeth Supplementary Figure 1

Nature Methods: doi: /nmeth Supplementary Figure 1 Supplementary Figure 1 Subtiligase-catalyzed ligations with ubiquitin thioesters and 10-mer biotinylated peptides. (a) General scheme for ligations between ubiquitin thioesters and 10-mer, biotinylated

More information

HPLC '88. Poster Presentation. Isolation of Thymosin B4 from Thymosin Fraction 5 by Reverse Phase HPLC

HPLC '88. Poster Presentation. Isolation of Thymosin B4 from Thymosin Fraction 5 by Reverse Phase HPLC Essentials in HPLC '88 Poster Presentation Isolation of Thymosin B4 from Thymosin Fraction 5 by Reverse Phase HPLC M. Badamchian, M.P. Strickler, M.J. Stone, A.L. Goldstein for Waters.bioresearchThe absolute,

More information

BabyBio IMAC columns DATA SHEET DS

BabyBio IMAC columns DATA SHEET DS BabyBio IMAC columns DATA SHEET DS 45 655 010 BabyBio columns for Immobilized Metal Ion Affinity Chromatography (IMAC) are ready-to-use for quick and easy purification of polyhistidine-tagged (His-tagged)

More information

Wheat Amino acids & Peptides for Hair Care. INCI Name EU/USA CAS # EINECS # Hydrolyzed wheat protein

Wheat Amino acids & Peptides for Hair Care. INCI Name EU/USA CAS # EINECS # Hydrolyzed wheat protein KELYAMIN Wheat Amino acids & Peptides for Hair Care Identification INCI Name EU/USA CAS # EINECS # Hydrolyzed wheat protein 70084-87-6 305-225-0 Composition % Liquid Powder Aqua Hydrolyzed wheat protein

More information

Saccharomyces cerevisiae*

Saccharomyces cerevisiae* THE JOURNAL OF BIOLOGICAL CHEMISTRY 1988 by The American Society for Biochemistry and Molecular Biology, Inc. Vol. 263, No. 29, Issue of October 15, pp. 14948-14955, 1988 Printed in U.S.A. Purification

More information

Electronic Supplementary Information. Table of Contents

Electronic Supplementary Information. Table of Contents Electronic Supplementary Information Examination of native chemical ligation using peptidyl prolyl thioester Takahiro Nakamura, Akira Shigenaga, Kohei Sato, Yusuke Tsuda, Ken Sakamoto, and Akira Otaka*

More information

LAB#23: Biochemical Evidence of Evolution Name: Period Date :

LAB#23: Biochemical Evidence of Evolution Name: Period Date : LAB#23: Biochemical Evidence of Name: Period Date : Laboratory Experience #23 Bridge Worth 80 Lab Minutes If two organisms have similar portions of DNA (genes), these organisms will probably make similar

More information

About the Kits...2 Description 2 Components 3 Storage 3. Factors That Influence Factor Xa Activity... 4

About the Kits...2 Description 2 Components 3 Storage 3. Factors That Influence Factor Xa Activity... 4 Novagen User Protocol TB205 Rev. C 0107 1 of 9 Factor Xa Kits Table of Contents About the Kits...2 Description 2 Components 3 Storage 3 Factors That Influence Factor Xa Activity... 4 Factor Xa Cleavage...5

More information

Acetyl CoA Carboxylase: The Purified Transcarboxylase Component

Acetyl CoA Carboxylase: The Purified Transcarboxylase Component Proc. Nat. Acad. Sci. USA Vol. 68, No. 6, pp. 12591263, June 1971 Acetyl CoA Carboxylase: The Purified Transcarboxylase Component (acyl CoA binding/carboxylation/exchange reactions/biotin) ALFRED W. ALBERTS,

More information

Supplementary Figure-1. SDS PAGE analysis of purified designed carbonic anhydrase enzymes. M1-M4 shown in lanes 1-4, respectively, with molecular

Supplementary Figure-1. SDS PAGE analysis of purified designed carbonic anhydrase enzymes. M1-M4 shown in lanes 1-4, respectively, with molecular Supplementary Figure-1. SDS PAGE analysis of purified designed carbonic anhydrase enzymes. M1-M4 shown in lanes 1-4, respectively, with molecular weight markers (M). Supplementary Figure-2. Overlay of

More information

1. Describe the relationship of dietary protein and the health of major body systems.

1. Describe the relationship of dietary protein and the health of major body systems. Food Explorations Lab I: The Building Blocks STUDENT LAB INVESTIGATIONS Name: Lab Overview In this investigation, you will be constructing animal and plant proteins using beads to represent the amino acids.

More information

Analysis of L- and D-Amino Acids Using UPLC Yuta Mutaguchi 1 and Toshihisa Ohshima 2*

Analysis of L- and D-Amino Acids Using UPLC Yuta Mutaguchi 1 and Toshihisa Ohshima 2* Analysis of L- and D-Amino Acids Using UPLC Yuta Mutaguchi 1 and Toshihisa Ohshima 2* 1 Department of Biotechnology, Akita Prefectural University, Akita City, Japan; 2 Department of Biomedical Engineering,

More information

DELFIA Tb-N1 DTA Chelate & Terbium Standard

DELFIA Tb-N1 DTA Chelate & Terbium Standard AD0029P-1 (en) 1 DELFIA Tb-N1 DTA Chelate & AD0012 Terbium Standard For Research Use Only INTRODUCTION DELFIA Tb-N1 DTA Chelate is optimized for the terbium labeling of proteins and peptides for use in

More information

ON THE DIFFERENCE IN ADSORPTION ON SEPHADEX GEL OF THE DEXTRANSUCRASE OF STREPTOCOCCUS BOVIS GROWN ON SUCROSE AND GLUCOSE MEDIA

ON THE DIFFERENCE IN ADSORPTION ON SEPHADEX GEL OF THE DEXTRANSUCRASE OF STREPTOCOCCUS BOVIS GROWN ON SUCROSE AND GLUCOSE MEDIA J. Gen. App!. Microbiol., 34, 213-219 (1988) ON THE DIFFERENCE IN ADSORPTION ON SEPHADEX GEL OF THE DEXTRANSUCRASE OF STREPTOCOCCUS BOVIS GROWN ON SUCROSE AND GLUCOSE MEDIA TOSHIRO HAYASHI, RYO IOROI,*

More information

STUDIES ON ASPIRIN ESTERASE OF HUMAN SERUM. Masako MORIKAWA, Michiko INOUE, Minoru TSUBOI. and Mamoru SUGIURA*

STUDIES ON ASPIRIN ESTERASE OF HUMAN SERUM. Masako MORIKAWA, Michiko INOUE, Minoru TSUBOI. and Mamoru SUGIURA* STUDIES ON ASPIRIN ESTERASE OF HUMAN SERUM Masako MORIKAWA, Michiko INOUE, Minoru TSUBOI and Mamoru SUGIURA* Department of Pharmacology, Tokyo College of Pharmacy, Horinouchi, Hachioji-shi, Tokyo 192-03,

More information

Chemistry 121 Winter 17

Chemistry 121 Winter 17 Chemistry 121 Winter 17 Introduction to Organic Chemistry and Biochemistry Instructor Dr. Upali Siriwardane (Ph.D. Ohio State) E-mail: upali@latech.edu Office: 311 Carson Taylor Hall ; Phone: 318-257-4941;

More information

BIOCHEMISTRY REVIEW. Overview of Biomolecules. Chapter 4 Protein Sequence

BIOCHEMISTRY REVIEW. Overview of Biomolecules. Chapter 4 Protein Sequence BIOCHEMISTRY REVIEW Overview of Biomolecules Chapter 4 Protein Sequence 2 3 4 Are You Getting It?? A molecule of hemoglobin is compared with a molecule of lysozyme. Which characteristics do they share?

More information

Chromatin IP (Isw2) Fix soln: 11% formaldehyde, 0.1 M NaCl, 1 mm EDTA, 50 mm Hepes-KOH ph 7.6. Freshly prepared. Do not store in glass bottles.

Chromatin IP (Isw2) Fix soln: 11% formaldehyde, 0.1 M NaCl, 1 mm EDTA, 50 mm Hepes-KOH ph 7.6. Freshly prepared. Do not store in glass bottles. Chromatin IP (Isw2) 7/01 Toshi last update: 06/15 Reagents Fix soln: 11% formaldehyde, 0.1 M NaCl, 1 mm EDTA, 50 mm Hepes-KOH ph 7.6. Freshly prepared. Do not store in glass bottles. 2.5 M glycine. TBS:

More information

Inhibition of the Anticoagulant Activity of Protein S by Prothrombin

Inhibition of the Anticoagulant Activity of Protein S by Prothrombin Inhibition of the Anticoagulant Activity of Protein S by Prothrombin C. A. Mitchell, S. M. Jane, and H. H. Salem Department ofmedicine, Monash Medical School, Prahran, Melbourne, Victoria, Australia Abstract

More information

Purification and characterization of chymotrypsin inhibitors from marine turtle egg white

Purification and characterization of chymotrypsin inhibitors from marine turtle egg white J. Biosci., Vol. 6, Number 2, June 1984, pp. 155 163. Printed in India. Purification and characterization of chymotrypsin inhibitors from marine turtle egg white M. K. GUHA and N. K. SINHA* Department

More information

Reconstitution of Neutral Amino Acid Transport From Partially Purified Membrane Components From Ehrlich Ascites Tumor Cells

Reconstitution of Neutral Amino Acid Transport From Partially Purified Membrane Components From Ehrlich Ascites Tumor Cells Journal of Supramolecular Structure 7:481-487 (1977) Molecular Aspects of Membrane Transport 5 1 1-5 17 Reconstitution of Neutral Amino Acid Transport From Partially Purified Membrane Components From Ehrlich

More information

2. Which of the following amino acids is most likely to be found on the outer surface of a properly folded protein?

2. Which of the following amino acids is most likely to be found on the outer surface of a properly folded protein? Name: WHITE Student Number: Answer the following questions on the computer scoring sheet. 1 mark each 1. Which of the following amino acids would have the highest relative mobility R f in normal thin layer

More information

Inhibition by Human Thrombomodulin of Factor Xa-mediated Cleavage of Prothrombin

Inhibition by Human Thrombomodulin of Factor Xa-mediated Cleavage of Prothrombin Inhibition by Human Thrombomodulin of Factor Xa-mediated Cleavage of Prothrombin E. Anne Thompson and Hatem H. Salem Department ofmedicine, Monash Medical School, Prahran, 3181, Victoria, Australia Abstract

More information

Purification of carp (Cyprinus carpio) kidney cathepsin C

Purification of carp (Cyprinus carpio) kidney cathepsin C Purification of carp (Cyprinus carpio) kidney cathepsin C (Pemurnian enzim cathepsin C dari ginjal ikan mas Cyprinus carpio) Pangkey H. dan Lantu S. ABSTRACT Pemurnian enzim cathepsin C diperoleh melalui

More information

DELFIA Tb-DTPA ITC Chelate & Terbium Standard

DELFIA Tb-DTPA ITC Chelate & Terbium Standard AD0035P-2 (en) 1 DELFIA Tb-DTPA ITC Chelate & AD0029 Terbium Standard For Research Use Only INTRODUCTION DELFIA Tb-DTPA ITC Chelate is optimized for the terbium labelling of proteins and peptides for use

More information

Europium Labeling Kit

Europium Labeling Kit Europium Labeling Kit Catalog Number KA2096 100ug *1 Version: 03 Intended for research use only www.abnova.com Table of Contents Introduction... 3 Intended Use... 3 Background... 3 Principle of the Assay...

More information

Midterm 1 Last, First

Midterm 1 Last, First Midterm 1 BIS 105 Prof. T. Murphy April 23, 2014 There should be 6 pages in this exam. Exam instructions (1) Please write your name on the top of every page of the exam (2) Show all work for full credit

More information

Supplementary Information

Supplementary Information Supplementary Information Structural basis of improved second generation 3-nitro-tyrosine trna synthetases Richard B. Cooley, Jessica L. Feldman, Camden M. Driggers, Taylor Bundy, Audrey L. Stokes, P.

More information

Activation of Protein C In Vivo

Activation of Protein C In Vivo Activation of Protein C In Vivo PHILIP C. CoMP, RENE M. JACOCKS, GARY L. FERRELL, and C. T. ESMON, Departments of Medicine and Pathology, University of Oklahoma Health Sciences Center Oklahoma City, Oklahoma

More information

Biomolecules: amino acids

Biomolecules: amino acids Biomolecules: amino acids Amino acids Amino acids are the building blocks of proteins They are also part of hormones, neurotransmitters and metabolic intermediates There are 20 different amino acids in

More information

Bovine factor X1 (Stuart factor): Amino-acid sequence of heavy chain (blood coagulation/homology to serine protease)

Bovine factor X1 (Stuart factor): Amino-acid sequence of heavy chain (blood coagulation/homology to serine protease) Proc. Nat. Acad. Sci. USA Vol. 72, No. 8, pp. 3082-3086, August 1975 Biochemistry Bovine factor X1 (Stuart factor): Amino-acid sequence of heavy chain (blood coagulation/homology to serine protease) K.

More information

Caution: For Laboratory Use. A product for research purposes only. Eu-W1024 ITC Chelate & Europium Standard. Product Number: AD0013

Caution: For Laboratory Use. A product for research purposes only. Eu-W1024 ITC Chelate & Europium Standard. Product Number: AD0013 TECHNICAL DATA SHEET Lance Caution: For Laboratory Use. A product for research purposes only. Eu-W1024 ITC Chelate & Europium Standard Product Number: AD0013 INTRODUCTION: Fluorescent isothiocyanato-activated

More information

Biochemical Techniques 06 Salt Fractionation of Proteins. Biochemistry

Biochemical Techniques 06 Salt Fractionation of Proteins. Biochemistry . 1 Description of Module Subject Name Paper Name 12 Module Name/Title 2 1. Objectives Understanding the concept of protein fractionation Understanding protein fractionation with salt 2. Concept Map 3.

More information

DELFIA Eu-DTPA ITC Chelate & Europium Standard

DELFIA Eu-DTPA ITC Chelate & Europium Standard AD0026P-3 (en) 1 DELFIA Eu-DTPA ITC Chelate & AD0021 Europium Standard For Research Use Only INTRODUCTION DELFIA Eu-DTPA ITC Chelate is optimized for the europium labelling of proteins and peptides for

More information

Data File. Sephadex ion exchange media. Ion exchange chromatography. Introduction. Sephadex ion exchangers General description

Data File. Sephadex ion exchange media. Ion exchange chromatography. Introduction. Sephadex ion exchangers General description A m e r s h a m B i o s c i e n c e s Sephadex ion exchange media Data File Ion exchange chromatography Based on well documented and well proven Sephadex base matrix Simple and economical to use Very high

More information

Annexure III SOLUTIONS AND REAGENTS

Annexure III SOLUTIONS AND REAGENTS Annexure III SOLUTIONS AND REAGENTS A. STOCK SOLUTIONS FOR DNA ISOLATION 0.5M Ethylene-diamine tetra acetic acid (EDTA) (ph=8.0) 1M Tris-Cl (ph=8.0) 5M NaCl solution Red cell lysis buffer (10X) White cell

More information

Milk-clotting Enzyme from Microorganisms

Milk-clotting Enzyme from Microorganisms APPLuD MICROBIOLOGY, Nov. 1968, p. 1727-1733 Copyright @ 1968 American Society for Microbiology Vol. 16, No. 11 Printed in U.S.A. Milk-clotting Enzyme from Microorganisms V. Purification and Crystallization

More information

Substrate Specificity and Salt Inhibition of Five Proteinases Isolated from the Pyloric Caeca and Stomach of Sardine

Substrate Specificity and Salt Inhibition of Five Proteinases Isolated from the Pyloric Caeca and Stomach of Sardine Agric. Biol. Chem., 46 (6), 1565~1569, 1982 1565 Substrate Specificity and Salt Inhibition of Five Proteinases Isolated from the Pyloric Caeca and Stomach of Sardine Minoru Noda, Thanh Vo Van, Isao Kusakabe

More information

LANCE Eu-W1024 ITC Chelate & Europium Standard AD0013 Development grade

LANCE Eu-W1024 ITC Chelate & Europium Standard AD0013 Development grade AD0017P-4 (en) 1 LANCE Eu-W1024 ITC Chelate & Europium Standard AD0013 Development grade INTRODUCTION Fluorescent isothiocyanato-activated (ITC-activated) Eu-W1024 chelate is optimized for labelling proteins

More information

Mode of IMP and Pyrophosphate Enhancement of Myosin and Actin Extraction from Porcine Meat

Mode of IMP and Pyrophosphate Enhancement of Myosin and Actin Extraction from Porcine Meat Biosci. Biotechnol. Biochem., 77 (6), 1214 1218, 2013 Mode of IMP and Pyrophosphate Enhancement of Myosin and Actin Extraction from Porcine Meat Yukinobu NAKAMURA, 1;y Koshiro MIGITA, 2 Akihiro OKITANI,

More information

Communication. Identification of Methionine N -Acetyltransferase from Saccharomyces cerevisiae

Communication. Identification of Methionine N -Acetyltransferase from Saccharomyces cerevisiae Communication THE JOURNAL OP BIOLOGICAL CHEMISTRY Vol. 265, No. 7, Issue of March 5, pp. 3603-3606,lSSO 0 1990 by The American Society for Biochemistry and Molecular Biology, Inc. Printed in U. S. A. Identification

More information

Amino acids-incorporated nanoflowers with an

Amino acids-incorporated nanoflowers with an Amino acids-incorporated nanoflowers with an intrinsic peroxidase-like activity Zhuo-Fu Wu 1,2,+, Zhi Wang 1,+, Ye Zhang 3, Ya-Li Ma 3, Cheng-Yan He 4, Heng Li 1, Lei Chen 1, Qi-Sheng Huo 3, Lei Wang 1,*

More information

PROTEINS. Building blocks, structure and function. Aim: You will have a clear picture of protein construction and their general properties

PROTEINS. Building blocks, structure and function. Aim: You will have a clear picture of protein construction and their general properties PROTEINS Building blocks, structure and function Aim: You will have a clear picture of protein construction and their general properties Reading materials: Compendium in Biochemistry, page 13-49. Microbiology,

More information

Identification of Three Major Components in Fish Sarcoplasmic Proteins

Identification of Three Major Components in Fish Sarcoplasmic Proteins Nippon Suisan Gakkaishi 54(6), 999-1004 (1988) Identification of Three Major Components in Fish Sarcoplasmic Proteins Takayuki Nakagawa,*1 Shugo Watabe,*2 and Kanehisa Hashimoto*2 (Received November 6,

More information

ISOLATION, ELECTROPHORETIC CHARACTERIZATION AND IMMUNO- LOGIC PROPERTIES

ISOLATION, ELECTROPHORETIC CHARACTERIZATION AND IMMUNO- LOGIC PROPERTIES Biochimica et Biophysica Acta, 379 (1975) 201-206 Elsevier Scientific Publishing Company, Amsterdam -- Printed in The Netherlands BBA 36907 TRYPSIN INHIBITOR FROM COW COLOSTRUM ISOLATION, ELECTROPHORETIC

More information

Caution: For Laboratory Use. A product for research purposes only. Eu-W1284 Iodoacetamido Chelate & Europium Standard. Product Number: AD0014

Caution: For Laboratory Use. A product for research purposes only. Eu-W1284 Iodoacetamido Chelate & Europium Standard. Product Number: AD0014 TECHNICAL DATA SHEET Lance Caution: For Laboratory Use. A product for research purposes only. Eu-W1284 Iodoacetamido Chelate & Europium Standard Product Number: AD0014 INTRODUCTION: Iodoacetamido-activated

More information

Self-association of α-chymotrypsin: Effect of amino acids

Self-association of α-chymotrypsin: Effect of amino acids J. Biosci., Vol. 13, Number 3, September 1988, pp. 215 222. Printed in India. Self-association of α-chymotrypsin: Effect of amino acids T. RAMAKRISHNA and M. W. PANDIT* Centre for Cellular and Molecular

More information

CHAPTER 21: Amino Acids, Proteins, & Enzymes. General, Organic, & Biological Chemistry Janice Gorzynski Smith

CHAPTER 21: Amino Acids, Proteins, & Enzymes. General, Organic, & Biological Chemistry Janice Gorzynski Smith CHAPTER 21: Amino Acids, Proteins, & Enzymes General, Organic, & Biological Chemistry Janice Gorzynski Smith CHAPTER 21: Amino Acids, Proteins, Enzymes Learning Objectives: q The 20 common, naturally occurring

More information

Page 8/6: The cell. Where to start: Proteins (control a cell) (start/end products)

Page 8/6: The cell. Where to start: Proteins (control a cell) (start/end products) Page 8/6: The cell Where to start: Proteins (control a cell) (start/end products) Page 11/10: Structural hierarchy Proteins Phenotype of organism 3 Dimensional structure Function by interaction THE PROTEIN

More information

Flagellar Hook Protein from Salmonella SJ25

Flagellar Hook Protein from Salmonella SJ25 JOURNAL OF BACrERIOLOGY, Jan. 1976, p. 68-73 Copyright 1976 American Society for Microbiology Vol. 125, No. 1 Printed in U.S.A. Flagellar Hook Protein from Salmonella SJ25 HIROAKI KAGAWA,* KATSUSHI OWARIBE,

More information

Supplementary material: Materials and suppliers

Supplementary material: Materials and suppliers Supplementary material: Materials and suppliers Electrophoresis consumables including tris-glycine, acrylamide, SDS buffer and Coomassie Brilliant Blue G-2 dye (CBB) were purchased from Ameresco (Solon,

More information

Isolation, Purification and Molecular Weight Determination of Antihypertensive Peptides Derived from

Isolation, Purification and Molecular Weight Determination of Antihypertensive Peptides Derived from 2011, Vol. 32, No. 02 213 1,2 1 1, * 1 1 (1. 361012 2. 350002) AS.1398 (Porphyra haitanesis)ace Sephadex G-15 (RP-HPLC) (MALDI-TOF-MS) 2000D ACE IC50 0.73mg/mL Sephadex G-15 6 E IC50 0.67mg/mL E RP-HPLC

More information

Amino Acids. Amino Acids. Fundamentals. While their name implies that amino acids are compounds that contain an NH. 3 and CO NH 3

Amino Acids. Amino Acids. Fundamentals. While their name implies that amino acids are compounds that contain an NH. 3 and CO NH 3 Fundamentals While their name implies that amino acids are compounds that contain an 2 group and a 2 group, these groups are actually present as 3 and 2 respectively. They are classified as α, β, γ, etc..

More information

Case 19 Purification of Rat Kidney Sphingosine Kinase

Case 19 Purification of Rat Kidney Sphingosine Kinase Case 19 Purification of Rat Kidney Sphingosine Kinase Focus concept The purification and kinetic analysis of an enzyme that produces a product important in cell survival is the focus of this study. Prerequisites

More information

Purification and characterization of a highly purified human factor

Purification and characterization of a highly purified human factor Proc. Nat. Acad. Sci. USA Vol. 79, pp. 72-724, December 1982 Biochemistry Purification and characterization of a highly purified human factor VIII consisting of a single type of polypeptide chain (blood

More information

Hydrolysis of porcine b-casein by bovine plasmin and bovine chymosin

Hydrolysis of porcine b-casein by bovine plasmin and bovine chymosin Z Lebensm Unters Forsch A (1999) 208 : 83 89 Q Springer-Verlag 1999 ORIGINAL PAPER Daniel P. Gallagher 7 Tanoj K. Singh Daniel M. Mulvihill Hydrolysis of porcine b-casein by bovine plasmin and bovine chymosin

More information

The Mechanism of Activation of Factor X

The Mechanism of Activation of Factor X THE JOURNAL OF BIOLOGICAL CHEMISTRY Vol. 249, No. 17, Issue of September 10, pp. 5614-5622, 1974 Printed in U.S.A. The Mechanism of Activation of Factor X KINETIC COETROL OF ALTERNATIVE PATHWAYS LEADING

More information

Microwave heating in peptide side chain modification via sulfhydryl reaction

Microwave heating in peptide side chain modification via sulfhydryl reaction Microwave heating in peptide side chain modification via sulfhydryl reaction E. Calce and S. De Luca* Institute of Biostructures and Bioimaging, National Research Council, 80134 Naples, Italy stefania.deluca@cnr.it

More information

If you like us, please share us on social media. The latest UCD Hyperlibrary newsletter is now complete, check it out.

If you like us, please share us on social media. The latest UCD Hyperlibrary newsletter is now complete, check it out. Sign In Forgot Password Register username username password password Sign In If you like us, please share us on social media. The latest UCD Hyperlibrary newsletter is now complete, check it out. ChemWiki

More information

Objective: You will be able to explain how the subcomponents of

Objective: You will be able to explain how the subcomponents of Objective: You will be able to explain how the subcomponents of nucleic acids determine the properties of that polymer. Do Now: Read the first two paragraphs from enduring understanding 4.A Essential knowledge:

More information

antigen Y. Kajita, D. Morgan, A.B. Parkes and B. Rees Smith

antigen Y. Kajita, D. Morgan, A.B. Parkes and B. Rees Smith Volume 87, number 2 FEBS 2756 August 985 Labelling and immunoprecipitation antigen of thyroid microsomal Y. Kajita, D. Morgan, A.B. Parkes and B. Rees Smith Endocrine Immunology Unit, 7th Floor Medicine.

More information

1-To know what is protein 2-To identify Types of protein 3- To Know amino acids 4- To be differentiate between essential and nonessential amino acids

1-To know what is protein 2-To identify Types of protein 3- To Know amino acids 4- To be differentiate between essential and nonessential amino acids Amino acids 1-To know what is protein 2-To identify Types of protein 3- To Know amino acids 4- To be differentiate between essential and nonessential amino acids 5-To understand amino acids synthesis Amino

More information

Glutathione Synthesis in Human Erythrocytes

Glutathione Synthesis in Human Erythrocytes Glutathione Synthesis in Human Erythrocytes II. PURIFICATION AND PROPERTIES OF THE ENZYMES OF GLUTATHIONE BIOSYNTHESIS PHILI W. MAjEUS, M. J. BRAUNER, M. B. SMITH, and VIRGINIA MINNICH From the Departments

More information

Mercaptoethanesulfonic acid as the reductive thiol-containing reagent employed for the derivatization of amino acids with o-phthaldialdehyde analysis

Mercaptoethanesulfonic acid as the reductive thiol-containing reagent employed for the derivatization of amino acids with o-phthaldialdehyde analysis Acta Univ. Sapientiae, Alimentaria, 1 (2008) 49 60 Mercaptoethanesulfonic acid as the reductive thiol-containing reagent employed for the derivatization of amino acids with o-phthaldialdehyde analysis

More information

Serrata) Alkaline Phosphatase

Serrata) Alkaline Phosphatase Vol. 41, No. 5, April 1997 BIOCHEMISTRY and MOLECULAR BIOLOGY INTERNATIONAL Pages 951-959 An Essential Tryptophan Residue of Green Crab (Syclla Serrata) Alkaline Phosphatase Wen-Zhu Zheng 1, Qing-Xi Chen

More information

NEW ONE-STAGE PROCEDURES FOR THE QUANTITATIVE DETERMINATION OF PROTHROMBIN AND LABILE FACTOR*

NEW ONE-STAGE PROCEDURES FOR THE QUANTITATIVE DETERMINATION OF PROTHROMBIN AND LABILE FACTOR* NEW ONE-STAGE PROCEDURES FOR THE QUANTITATIVE DETERMINATION OF PROTHROMBIN AND LABILE FACTOR* MARIO STEFANINI, M.D.f From the Department ofbiochemistry, Marquette University School of Medicine, Milwaukee,

More information

protein C (blood clotting/factor V/clotting inhibitors)

protein C (blood clotting/factor V/clotting inhibitors) Proc. Nati Acad. Sci. USA Vol. 80, pp. 1584-1588, March 1983 Biochemistry Human coagulation factor Va is a cofactor for the activation of protein C (blood clotting/factor V/clotting inhibitors) HATEM H.

More information

Prerequisites Protein purification techniques and protein analytical methods. Basic enzyme kinetics.

Prerequisites Protein purification techniques and protein analytical methods. Basic enzyme kinetics. Case 19 Purification of Rat Kidney Sphingosine Kinase Focus concept The purification and kinetic analysis of an enzyme that produces a product important in cell survival is the focus of this study. Prerequisites

More information

Supporting Information for:

Supporting Information for: Supporting Information for: Methylerythritol Cyclodiphosphate (MEcPP) in Deoxyxylulose Phosphate Pathway: Synthesis from an Epoxide and Mechanisms Youli Xiao, a Rodney L. Nyland II, b Caren L. Freel Meyers

More information

Localization of Methylated Arginine in the Al Protein from Myelin

Localization of Methylated Arginine in the Al Protein from Myelin Proc. Nat. Acad. Sci. USA Vol. 68, No. 4, pp. 765-769, April 1971 Localization of Methylated Arginine in the Al Protein from Myelin STEVEN BROSTOFF AND E. H. EYLAR The Salk Institute, San Diego, California

More information

(65 pts.) 27. (10 pts.) 28. (15 pts.) 29. (10 pts.) TOTAL (100 points) Moorpark College Chemistry 11 Spring Instructor: Professor Gopal

(65 pts.) 27. (10 pts.) 28. (15 pts.) 29. (10 pts.) TOTAL (100 points) Moorpark College Chemistry 11 Spring Instructor: Professor Gopal Moorpark College Chemistry 11 Spring 2012 Instructor: Professor Gopal Examination # 5: Section Five May 1, 2012 Name: (print) GOOD LUCK! Directions: Make sure your examination contains TWELVE total pages

More information

Biological systems interact, and these systems and their interactions possess complex properties. STOP at enduring understanding 4A

Biological systems interact, and these systems and their interactions possess complex properties. STOP at enduring understanding 4A Biological systems interact, and these systems and their interactions possess complex properties. STOP at enduring understanding 4A Homework Watch the Bozeman video called, Biological Molecules Objective:

More information

Organic Chemistry 3540

Organic Chemistry 3540 rganic Chemistry 3540 December 8, 2004 (8 Pages, 13 Parts) ame 1. (8%) Many organic compounds found in living systems are complex molecules which can be characterized, in part, by simply listing the chemical

More information

Note. Simplified protein hydrolysis with methanesulphonic acid at elevated temperature for the complete amino acid analysis of proteins

Note. Simplified protein hydrolysis with methanesulphonic acid at elevated temperature for the complete amino acid analysis of proteins Journal of Chromatography, 448 (1988) 404-410 Elsevier Science Publishers B.V., Amsterdam - Printed in The Netherlands CHROM. 20 688 Note Simplified protein hydrolysis with methanesulphonic acid at elevated

More information

BIOL 347L Laboratory Three

BIOL 347L Laboratory Three Introduction BIOL 347L Laboratory Three Osmosis in potato and carrot samples Osmosis is the movement of water molecules through a selectively permeable membrane into a region of higher solute concentration,

More information

Practice Problems 3. a. What is the name of the bond formed between two amino acids? Are these bonds free to rotate?

Practice Problems 3. a. What is the name of the bond formed between two amino acids? Are these bonds free to rotate? Life Sciences 1a Practice Problems 3 1. Draw the oligopeptide for Ala-Phe-Gly-Thr-Asp. You do not need to indicate the stereochemistry of the sidechains. Denote with arrows the bonds formed between the

More information

The incorporation of labeled amino acids into lens protein. Abraham Speclor and Jin H. Kinoshita

The incorporation of labeled amino acids into lens protein. Abraham Speclor and Jin H. Kinoshita The incorporation of labeled amino acids into lens protein Abraham Speclor and Jin H. Kinoshita Calf and rabbit lenses cultured in a medium containing a radioactive amino acid incorporate some labeled

More information

Amino Acids. Review I: Protein Structure. Amino Acids: Structures. Amino Acids (contd.) Rajan Munshi

Amino Acids. Review I: Protein Structure. Amino Acids: Structures. Amino Acids (contd.) Rajan Munshi Review I: Protein Structure Rajan Munshi BBSI @ Pitt 2005 Department of Computational Biology University of Pittsburgh School of Medicine May 24, 2005 Amino Acids Building blocks of proteins 20 amino acids

More information

Protocol for Gene Transfection & Western Blotting

Protocol for Gene Transfection & Western Blotting The schedule and the manual of basic techniques for cell culture Advanced Protocol for Gene Transfection & Western Blotting Schedule Day 1 26/07/2008 Transfection Day 3 28/07/2008 Cell lysis Immunoprecipitation

More information

ADSORPTION AND DESORPTION OF METAL IONS BY SYSTEMS BASED ON CELLULOSE DERIVATIVES THAT CONTAIN AMINO ACID RESIDUES"

ADSORPTION AND DESORPTION OF METAL IONS BY SYSTEMS BASED ON CELLULOSE DERIVATIVES THAT CONTAIN AMINO ACID RESIDUES (41) Vol. 41, No.6 (1985) T-235 (Received May 24, 1984) ADSORPTION AND DESORPTION OF METAL IONS BY SYSTEMS BASED ON CELLULOSE DERIVATIVES THAT CONTAIN AMINO ACID RESIDUES" By Toshihiko Sato, Shigenori

More information

Towards a New Paradigm in Scientific Notation Patterns of Periodicity among Proteinogenic Amino Acids [Abridged Version]

Towards a New Paradigm in Scientific Notation Patterns of Periodicity among Proteinogenic Amino Acids [Abridged Version] Earth/matriX: SCIENCE TODAY Towards a New Paradigm in Scientific Notation Patterns of Periodicity among Proteinogenic Amino Acids [Abridged Version] By Charles William Johnson Earth/matriX Editions P.O.

More information

Effects of Amino Acids and Glutathione on Rat Liver Histidase Activity in vitro

Effects of Amino Acids and Glutathione on Rat Liver Histidase Activity in vitro [Agr. Biol. Chem., Vol. 34, No. 5, p. 710-714, 1970] Effects of Amino Acids and Glutathione on Rat Liver Histidase Activity in vitro By Katuhiko NODA Department of Nutrition, School of Medicine, Tokushima

More information

9/6/2011. Amino Acids. C α. Nonpolar, aliphatic R groups

9/6/2011. Amino Acids. C α. Nonpolar, aliphatic R groups Amino Acids Side chains (R groups) vary in: size shape charge hydrogen-bonding capacity hydrophobic character chemical reactivity C α Nonpolar, aliphatic R groups Glycine (Gly, G) Alanine (Ala, A) Valine

More information

Moorpark College Chemistry 11 Fall Instructor: Professor Gopal. Examination # 5: Section Five May 7, Name: (print)

Moorpark College Chemistry 11 Fall Instructor: Professor Gopal. Examination # 5: Section Five May 7, Name: (print) Moorpark College Chemistry 11 Fall 2013 Instructor: Professor Gopal Examination # 5: Section Five May 7, 2013 Name: (print) Directions: Make sure your examination contains TEN total pages (including this

More information

Identification of NADPH-thioredoxin reductase system

Identification of NADPH-thioredoxin reductase system Proc. Nat. Acad. Sci. USA Vol. 72, No. 11, pp. 4233-4237, November 1975 Biochemistry Identification of NADPH-thioredoxin reductase system in Euglena gracilis* (ribonucleotide reduction) S. MUNAVALLIO,

More information

Proteins. Amino acids, structure and function. The Nobel Prize in Chemistry 2012 Robert J. Lefkowitz Brian K. Kobilka

Proteins. Amino acids, structure and function. The Nobel Prize in Chemistry 2012 Robert J. Lefkowitz Brian K. Kobilka Proteins Amino acids, structure and function The Nobel Prize in Chemistry 2012 Robert J. Lefkowitz Brian K. Kobilka O O HO N N HN OH Ser65-Tyr66-Gly67 The Nobel prize in chemistry 2008 Osamu Shimomura,

More information

Molecular Biology. general transfer: occurs normally in cells. special transfer: occurs only in the laboratory in specific conditions.

Molecular Biology. general transfer: occurs normally in cells. special transfer: occurs only in the laboratory in specific conditions. Chapter 9: Proteins Molecular Biology replication general transfer: occurs normally in cells transcription special transfer: occurs only in the laboratory in specific conditions translation unknown transfer:

More information

Separation of Plasma and Serum and Their Proteins from Whole Blood

Separation of Plasma and Serum and Their Proteins from Whole Blood Separation of Plasma and Serum and Their Proteins from Whole Blood BCH 471 [Practical] BLOOD COMPOSITION Other names to blood cells Red blood cells (erythrocytes) White blood cells (leukocytes) Platelets

More information

The Presence of Protein-Bound y-carboxyglutamic Acid

The Presence of Protein-Bound y-carboxyglutamic Acid The Presence of Protein-Bound y-carboxyglutamic Acid in Calcium-Containing Renal Calculi J. B. LIAN, E. L. PRIEN, JR., M. J. GLIMCHER, and P. M. GALLOP From the Departments of Orthopedic Surgery, Biological

More information

Reinvestigation on the Amino Acid Composition and C-Terminal Group of Taka-Amylase A. By Kozo NARITA*, HIRONORI MURAKAMI* and TOKUJI IKENAKA**

Reinvestigation on the Amino Acid Composition and C-Terminal Group of Taka-Amylase A. By Kozo NARITA*, HIRONORI MURAKAMI* and TOKUJI IKENAKA** The Journal of Biochemistry, Vol. 59, No. 2, 1966 Reinvestigation on the Amino Acid Composition and C-Terminal Group of Taka-Amylase A By Kozo NARITA*, HIRONORI MURAKAMI* and TOKUJI IKENAKA** (From *the

More information

New immunomodulators with antitumoral properties; Isolation of active naturally-occurring anti-mitotic components of MR>1KD from pollen extract T60

New immunomodulators with antitumoral properties; Isolation of active naturally-occurring anti-mitotic components of MR>1KD from pollen extract T60 I M M U N O M O D U L A T O R S U P P O R T : GRAMINEX Flower Pollen Extract New immunomodulators with antitumoral properties; Isolation of active naturally-occurring anti-mitotic components of MR>1KD

More information

THE isolation and availability of crystalline

THE isolation and availability of crystalline Unidentified Factors in Poultry Nutrition. PROPERTIES AND PRELIMINARY FRACTIONATION OF A GROWTH FACTOR IN CONDENSED FISH SOLUBLES H. MENGE, C. A. DENTON, J. R. SIZEMORE, R. J. LILLIE AND H. R. BIRD Bureau

More information

Defining HbA1c: the indispensable decision to approach measurement standardization

Defining HbA1c: the indispensable decision to approach measurement standardization Defining HbA1c: the indispensable decision to approach measurement standardization Jan-Olof Jeppsson IFCC WG for HbA1c standardization Clinical Chemistry, Malmö University Hospital Sweden 6 November, 2007

More information

The Activation of Prothrombin by Platelet-Bound Factor X,

The Activation of Prothrombin by Platelet-Bound Factor X, Eur. J. Biochem. 104, 549-557 (1980) The Activation of Prothrombin by Platelet-Bound Factor X, Bjorn DAHLBACK and Johan STENFLO Department of Clinical Chemistry, University of Lund (Received September

More information