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Supporting Information Lee et al. 10.1073/pnas.0910950106 Fig. S1. Fe (A), Zn (B), Cu (C), and Mn (D) concentrations in flag leaves from WT, osnas3-1, and OsNAS3-antisense (AN-2) plants. Each measurement was from four leaves at flowering stage. Error bars represent SE. Significant differences from WT were determined by Student s t test; *, P 0.05. 1of9

Fig. S2. Real-time PCR analyses of WT and OsNAS3-D1 mutants, using RNA samples from flag leaves (A), flowers (B), and immature seeds (C). Gene expression was relative transcript level between OsNAS3 and actin1 transcripts. Real-time PCR analysis of OsFerritin1 (D) and OsFerritin2 (E). RNA was prepared from 8-day-old shoots grown on standard MS (Fe ) or Fe-deficient (Fe ) media. Transcript levels are represented by ratio between mrna level for OsFerritin genes and that for rice actin1. Vertical bars indicate standard deviation. Significant differences from WT were determined by Student s t test; *, P 0.05. 2of9

Fig. S3. Enhanced tolerance of OsNAS3-D2 plants under Fe and Zn deficiencies. WT and OsNAS3-D2 seeds were germinated and seedlings grown on solid MS medium in presence of 100 M Fe and 30 MZn(A) or in absence of Fe (B)orZn(C). Lower panels are enlargements of second leaves. Pictures were taken 8 days after germination. (Scale bars, 5 cm.) Heights (D) and total chlorophyll contents (E) ofwtandosnas3-d2 plants. Data are means SD (n 8 for height; n 4 for measurements of chlorophyll contents). Significant differences from WT were determined by Student s t test; *, P 0.05. 3of9

Fig. S4. Phenotypes of osnas3-1 and antisense transgenics under Fe and Zn deficiencies. Plants of WT, osnas3-1, and OsNAS3-antisense (AN-2) were grown on solid MS medium in presence of 100 M Fe and 30 MZn(Aand D) or in absence of Fe (B and E)orZn(Cand F). Lower panels are enlargements of second leaves. Pictures were taken 8 days after germination. (Scale bars, 5 cm.) Quantification of phenotypes for osnas3-1 and antisense transgenic plants. Heights (G) and total chlorophyll contents (H)inWT,osnas3-1, and OsNAS3-antisense (AN-2) plants. Data are means SD (n 8 for height, n 4 for chlorophyll content). Significant differences from WT were determined by Student s t test; *, P 0.05. 4of9

Fig. S5. Fe (A), Zn (B), Cu (C), and Mn (D) concentrations in chloroplasts, mitochondria, and protoplasts from WT and OsNAS3-D1 plants grown on standard MS (Fe ) or Fe-deficient (Fe ) media. Error bars represent SE. Significant differences from WT were determined by Student t tests; *, P 0.05. 5of9

Fig. S6. Phenotypes of OsNAS3-D1 and osnas3 1 plants exposed to elevated levels of Cd. WT, OsNAS3-D1 (A), and osnas3 1 (B) plants were grown for 10 days on solid agar containing half-strength MS medium supplemented with 0.3 mm CdCl 2 (A and B). (Scale bars, 2.5 cm.) (C) Average heights (n 8) of WT and mutant plants grown on media containing excess metals. (D) Cd from shoots and roots of WT, OsNAS3-D1, and osnas3-1. 6of9

Fig. S7. Fe (A), Zn (B), Cu (C), and Mn (D) contents in flag leaves of WT, OsNAS3-D1, and OsNAS3-D2. Each measurement was from 4 leaves at flowering stage. Error bars represent SE. Significant differences from WT were determined by Student s t test; *, P 0.05. 7of9

Fig. S8. Ni (A), Cd (B), Se (C), Mg (D), Ca (E), and P (F) contents in mature seeds of WT and OsNAS3-D1. Error bars represent SE. Significant differences from WT were determined by Student s t test; *, P 0.05. 8of9

Table S1. Primers used in this study Primer OsNAS3-forward OsNAS3-reverse OsAct1-forward OsAct1-reverse F1 R1 F2 R2 F3 RB Anf AnR OX-F OX-R Nucleotide sequence 5 -GTGATCAACTCCGTCATCATC-3 5 -TCAGTCTCATCATGGGAAAAA-3 5 -TGGAAGCTGCGGGTATCCAT-3 5 -TACTCAGCCTTGGCAATCCACA-3 5 -GTGATCAACTCCGTCATCATC-3 5 -TCCCCTCGTTTAGATCACTTT-3 5 -TTTAGGGGAAATGGAGGTTACT-3 5 -CTGTAACACTTTAACGCACCAA-3 5 -GGCTTGCTCTTGTCATAGGC-3 5 -CAAGTTAGTCATGTAATTAGCCAC-3 5 -AAGGTACCCCTCCTTCCACAACTACGACA-3 5 -AAAAGCTTCATCAGTCTCATCATGGGAAAA-3 5 -AAAAGCTTATCACCAGTTGGAGCTAATCGA-3 5 -AAGGTACCCATCAGTCTCATCATGGGAAAA-3 9of9