Supporting Information. Supporting Tables. S-Table 1 Primer pairs for RT-PCR. Product size. Gene Primer pairs

Similar documents
Supplementary Table 2. Plasma lipid profiles in wild type and mutant female mice submitted to a HFD for 12 weeks wt ERα -/- AF-1 0 AF-2 0

AAV-TBGp-Cre treatment resulted in hepatocyte-specific GH receptor gene recombination

ZL ZDF ZDF + E2 *** Visceral (g) ZDF

Fig. S1. Dose-response effects of acute administration of the β3 adrenoceptor agonists CL316243, BRL37344, ICI215,001, ZD7114, ZD2079 and CGP12177 at

SUPPLEMENTARY DATA. Supplementary Table 1. Primer sequences for qrt-pcr

SUPPLEMENTARY INFORMATION

Males- Western Diet WT KO Age (wks) Females- Western Diet WT KO Age (wks)

Figure 1. Effects of FGF21 on adipose tissue. (A) Representative histological. findings of epididymal adipose tissue (B) mrna expression of

Male 30. Female. Body weight (g) Age (weeks) Age (weeks) Atg7 f/f Atg7 ΔCD11c

Hmgcoar AGCTTGCCCGAATTGTATGTG TCTGTTGTAACCATGTGACTTC. Cyp7α GGGATTGCTGTGGTAGTGAGC GGTATGGAATCAACCCGTTGTC

18s AAACGGCTACCACATCCAAG CCTCCAATGGATCCTCGTTA. 36b4 GTTCTTGCCCATCAGCACC AGATGCAGCAGATCCGCAT. Acc1 AGCAGATCCGCAGCTTG ACCTCTGCTCGCTGAGTGC

Supplementary Figure 1

Differential effects of estrogen/androgen on the prevention of nonalcoholic fatty liver disease in male rat

Supplemental Information

Supplementary Figure S1

General Laboratory methods Plasma analysis: Gene Expression Analysis: Immunoblot analysis: Immunohistochemistry:

Supplementary Figure S1. Effect of Glucose on Energy Balance in WT and KHK A/C KO

Suppl. Figure 1. T 3 induces autophagic flux in hepatic cells. (A) RFP-GFP-LC3 transfected HepG2/TRα cells were visualized and cells were quantified

Supplementary Figure 1. PAQR3 knockdown inhibits SREBP-2 processing in CHO-7 cells CHO-7 cells were transfected with control sirna or a sirna

GPR120 *** * * Liver BAT iwat ewat mwat Ileum Colon. UCP1 mrna ***

Supplementary Figure 1

Supplementary Figure 1

SUPPLEMENTARY INFORMATION. Supplementary Figures S1-S9. Supplementary Methods

2.5. AMPK activity

Supplementary Fig. 1 eif6 +/- mice show a reduction in white adipose tissue, blood lipids and normal glycogen synthesis. The cohort of the original

SUPPLEMENTARY INFORMATION

A synergistic anti-obesity effect by a combination of capsinoids and cold temperature through the promotion of beige adipocyte biogenesis

(a) Significant biological processes (upper panel) and disease biomarkers (lower panel)

SUPPLEMENTARY DATA. Supplementary Table 1. Primers used in qpcr

Supplementary Figure 1

Yun-Jung Choi, Jiangao Song, Jeff D. Johnson, Charles McWherter. NASH-TAG Conference Park City, Utah January 4, 2019

BMP6 treatment compensates for the molecular defect and ameliorates hemochromatosis in Hfe knockout mice

SUPPLEMENTARY FIGURES

Supplemental Information. Increased 4E-BP1 Expression Protects. against Diet-Induced Obesity and Insulin. Resistance in Male Mice

Supplementary Materials

Supplementary Figure 1: Neuregulin 1 increases the growth of mammary organoids compared to EGF. (a) Mammary epithelial cells were freshly isolated,

Supplementary Information. MicroRNA-33b knock-in mice for an intron of sterol regulatory

Supplementary Table 1. Characterization of HNSCC PDX models established at MSKCC

3-Thia Fatty Acids A New Generation of Functional Lipids?

ab Hepatic Lipid Accumulation/ Steatosis Assay Kit

marker. DAPI labels nuclei. Flies were 20 days old. Scale bar is 5 µm. Ctrl is

Epithelial interleukin-25 is a key mediator in Th2-high, corticosteroid-responsive

Supplemental Table 1. List of primers used for real time PCR.

ALT (U/L) (Relative expression) HDL (mm) (Relative expression) ALT (U/L) (Relative expression)

Dietary α-linolenic acid-rich flaxseed oil prevents against alcoholic hepatic steatosis

A Hepatocyte Growth Factor Receptor (Met) Insulin Receptor hybrid governs hepatic glucose metabolism SUPPLEMENTARY FIGURES, LEGENDS AND METHODS

Supplemental Information. Induction of Expansion and Folding. in Human Cerebral Organoids

a. b. c. d. e. f. g. h. i. j. k. l. m. n. o. p.

SUPPLEMENTARY INFORMATION

SUPPLEMENTAL MATERIALS AND METHODS. Puromycin-synchronized metabolic labelling - Transfected HepG2 cells were depleted of

Supplemental Material:

Gene Polymorphisms and Carbohydrate Diets. James M. Ntambi Ph.D

Supplementary Figure 1. HOPX is hypermethylated in NPC. (a) Methylation levels of HOPX in Normal (n = 24) and NPC (n = 24) tissues from the

Supplementary Materials for

SUPPLEMENTARY INFORMATION

Supplementary Figure 1

Supplemental Table 1: Demographics and characteristics of study participants. Male, n (%) 3 (20%) 6 (50%) Age, years [mean ± SD] 33.3 ± ± 9.

Supplemental Table 1 Primer sequences (mouse) used for real-time qrt-pcr studies

Name Animal source Vendor Cat # Dilutions

McAlpine PERK-GSK3 regulates foam cell formation. Supplemental Material. Supplementary Table I. Sequences of real time PCR primers.

Supplementary Figure 1: Hsp60 / IEC mice are embryonically lethal (A) Light microscopic pictures show mouse embryos at developmental stage E12.

Supplementary Figure S I: Effects of D4F on body weight and serum lipids in apoe -/- mice.

Supplementary Figure S1. Flow cytometric analysis of the expression of Thy1 in NH cells. Flow cytometric analysis of the expression of T1/ST2 and

control kda ATGL ATGLi HSL 82 GAPDH * ** *** WT/cTg WT/cTg ATGLi AKO/cTg AKO/cTg ATGLi WT/cTg WT/cTg ATGLi AKO/cTg AKO/cTg ATGLi iwat gwat ibat

SUPPLEMENTARY INFORMATION Glucosylceramide synthase (GlcT-1) in the fat body controls energy metabolism in Drosophila

Supplementary Information

The role of apolipoprotein D in lipid metabolism and metabolic syndrome

Fig. S4. Current-voltage relations of iglurs. A-C: time courses of currents evoked by 100 ms pulses

Serum Amyloid A3 Gene Expression in Adipocytes is an Indicator. of the Interaction with Macrophages

Supplementary Table 1. Metabolic parameters in GFP and OGT-treated mice

PKCζ Promotes Breast Cancer Invasion by Regulating Expression of E-cadherin and Zonula Occludens-1 (ZO-1) via NFκB-p65

Cornstarch

Supplementary Figure 1 a

Supplementary Table 1. The primers used for quantitative RT-PCR. Gene name Forward (5 > 3 ) Reverse (5 > 3 )

Novel Reduction of PCSK9 Expression: Mechanistic Insights into the Anti-Atherosclerotic & Hypolipidemic Effects of Heat Shock Protein 27

Supplementary Materials for

Supplementary Figure 1: si-craf but not si-braf sensitizes tumor cells to radiation.

Kaurenoic acid, a Diterpene Derived from Aralia continentalis, Alleviates Lipogenesis in HepG2 Cells.

TBP (H) CACAGTGAATCTTGGTTGTAAACTTGA AAACCGCTTGGGATTATATTCG ANGPTL8 (H) CTGGGCCCTGCCTACCGAGA CCGATGCTGCTGTGCCACCA [1]

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION

Supplementary Figure (OH) 22 nanoparticles did not affect cell viability and apoposis. MDA-MB-231, MCF-7, MCF-10A and BT549 cells were

Requires Signaling though Akt2 Independent of the. Transcription Factors FoxA2, FoxO1, and SREBP1c

Supporting Information

Regulation of Lipid Homeostasis: Lipid Droplets

Boucher et al NCOMMS B

Supplemental Information

Supplementary Figure 1.

Endocannabinoid-activated Nlrp3 inflammasome in infiltrating macrophages mediates β- cell loss in type 2 diabetes

Defective Hepatic Autophagy in Obesity Promotes ER Stress and Causes Insulin Resistance

Supplementary Materials for

HIV VPR alters fat metabolism. Dorothy E Lewis PhD/Ashok Balasubramanyam MD

Supplementary Materials for

ACC ELOVL MCAD. CPT1α 1.5 *** 0.5. Reverbα *** *** 0.5. Fasted. Refed

T H E J O U R N A L O F C E L L B I O L O G Y

Quantitative Real-Time PCR was performed as same as Materials and Methods.

Supplementary Figure 1.

SUPPORTING MATREALS. Methods and Materials

Metabolism dysregulation induces a specific lipid signature of nonalcoholic steatohepatitis in patients

Cytochrome-C (rat, mouse) forward GGAGGCAAGCATAAGACTGG. mouse hexokinase 2 gene, intron 9 reverse GGGAACACAAAAGACCTCTTCTGG

Transcription:

Supporting Information Supporting Tables S-Table 1 Primer pairs for RT-PCR. Gene Primer pairs Product size (bp) FAS F: 5 TCTTGGAAGCGATGGGTA 3 429 R: 5 GGGATGTATCATTCTTGGAC 3 SREBP-1c F: 5 CGCTACCGTTCCTCTATCA 3 169 R: 5 CACTTCGCAGGGTCAGG 3 ACCα F: 5 AAGGGCTACCTCTAATG 3 653 R: 5 CACAAACCAGCGTCTCA 3 PPARα F: 5 AGGCTATCCCAGGCTTTGC 3 484 R: 5 CGTCTGACTCGGTCTTCTTG 3 ACO1 F: 5 TCAAGCAAAGCGAACCAG 3 421 R: 5 ACCATACCACCCACCAAC 3 MACD F: 5 CTGCGTGACAGAACCCTC 3 517 R: 5 CAACTTTCATCGCCATTT 3 VLACD F: 5 AGGCTTTGGCGGCTTTCTG 3 434 R: 5 CTCTGCTGGCACCTTGACT 3 UCP-2 F: 5 TGGGCACCATCCTAACC 3 375 R: 5 TGGCATTTCGGGCAACA 3 TNFα F: 5 ACATCTCCCTCCGGAAAGGA 3 150 R: 5 CGCCACGAGCAGGAATGAGA 3 IL-6 F: 5 GGATACCACCCACAACAG 3 518 R: 5 TGCCGAGTAGACCTCATAG 3 ERα F: 5 GGTCCAATTCTGACAATCGAC 3 318 R: 5 TTTCGTATCCCGCCTTTCATC 3 ERβ F: 5 GCACCTTGAGTCCAGAG 3 249 R: 5 TCAGTCCCACCATTAGC 3 AR F: 5 GCTCTGGCAGCAGTGAAGCA 3 252 R: 5 AGTCCCCATAGCGGCATTGC 3 CPT-1 F: 5 CTCAGCCTCTACGGCAAATC 3 377 R: 5 CTTCTTGATCAGGCCTTTGC 3 PPARγ F: 5 ATTCTGGCCCACCAACTTCGG 3 339 R: 5 TGGAAGCCTGATGCTTTATCCCCA 3 LXRα F: 5 TACAACCCTGGGAGTGAGA 3 310 R: 5 TTAGCATCCGTGGGAACAT 3 DGAT1 F: 5 GGATGGTCCCTACTATCCAG 3 210 R: 5 CCACCAGTCCCTGTAGAACT 3 DGAT2 F: 5 GGAGGCCACCGAAGTTAGCA 3 195 R: 5 CACCTCCCACCACGATGACAA 3 1

S-Table 2 Antibodies and dilutions Antibody Mol. Wt. Dilution Cat. nr. Source Company ERα 66KD 1:100 sc-542 rabbit polyclonal IgG Santa Cruz TNFα 17KD 1:200 sc-1350 goat polyclonal IgG Santa Cruz AR 87KD 1:200 sc-816 rabbit polyclonal IgG Santa Cruz UCP2 32KD 1:200 sc-6526 goat polyclonal IgG Santa Cruz FAS 207KD 1:200 sc-20140 rabbit polyclonal IgG Santa Cruz CPT1 86KD 1:200 sc-20514 goat polyclonal IgG Santa Cruz HMGCR 43KD 1:200 sc-27578 goat polyclonal IgG Santa Cruz β-actin 42KD 1:500 sc-47778 mouse monoclonal IgG Santa Cruz IL-6 26KD 1:1000 ab-6672 rabbit polyclonal IgG Abcam P-ACC 280KD 1:1000 #3661 rabbit polyclonal IgG Cell Signaling ACC 280KD 1:1000 #3676 rabbit monoclonal IgG Cell Signaling P-HMGCR 98KD 1:1000 #09-356 rabbit polyclonal IgG Millipore S-Table 3 Total cholesterol and cholesterol ester formation from the rat hepatocytes in vitro with different treatments (concentration expressed in nm/well). Medium with Palmitic acid : Oleic acid (1:2) Vehicle E2 E2+ICI DHT DHT+Flu E2+DHT Total cholesterol 46.67±6.67 13.31±3.32* 40±10.01 16.25±4.22* 42.52±8.83 21.74±7.38* Cholesterol 16.33±7.96 4.62±3.22* 18.46±5.66 7.86±5.34 20.18±9.32 9.64±4.81 ester * p< 0.05 treatments (E2, DHT and/or E2+DHT) vs. vehicle 2

Supplemental Figures S-Fig. 1 Accumulation of lipids in hepatocytes by ORO staining (A) Liver from ORX normal diet control group. (B) Liver cells with marked lipid accumulation in all 1, 2, and 3 zones in ORX HFD control group. (C) Liver from E2-treated group; zones 2 and 3 of liver lobules contain normal appearing liver cells rimmed with marked lipid changes in zone 1. (D) Liver from DHT-treated group; zone 2 and 1 of liver lobules contain normal appearing liver cells rimmed with marked lipid changes in zone 3. (E) Liver from E2+DHT-treated group; zone 2 and 3 of liver lobules contain normal appearing liver cells rimmed with also less lipid changes in zone 1. (F) Quantification of ORO staining shown as Mean±SEM, ***, P<0.001 versus HFD-C, high fat diet control. 3

S-Fig. 2 Histopathology of the liver tissues by hematoxylin and eosin (H/E) staining from WT gonad intact (non-orx) SD male rats (n=6/group) (A) Liver from the WT normal diet (ND) control group. Zonation is identical as in Fig. 1 (B) Liver cells with lipid accumulation in the HFD control. The inflammation and fatty liver cell presence is significantly less abundant than in HFD ORX liver (Fig. 1); HFD liver from the E2-treated group (C); zones 2 and 3 of liver lobules contain normal appearing liver cells rimmed with fatty changes in zone 3. HFD liver from the DHT-treated group (D) ; zones 1 and 2 of liver lobules contain normal appearing liver cells rimmed with fatty changes in zone 1. (E1-2) HFD liver from the E2+DHT-treated group, normalized liver cells in zones 1, 2 and 3 of liver lobules and scattered with some lipid accumulated liver cells. 4

S-Fig. 3 Genes for triglyceride synthesis in SD rat liver tissues No significant changes could be observed in any of the genes involved in TG synthesis among the treatment groups. None of these above shown treated groups versus HFD-C (high fat diet control) were statistically significant. S-Fig. 4 Relative densitometry analysis of the alterations of phosphorylation related to protein levels for P-ACC/total ACC and P-HMGCR/total HMGCR levels after different treatments (calculated from Fig. 3A). The densitometric values were pooled from three animals in each group and repeated three times by Western blot, and are shown as Mean±SEM. *, p<0.05, ***, p<0.001 versus HFD-C, high fat diet control. 5

5A) 5B) S-Fig. 5 Expression levels for genes involves in Fatty acid synthesis (A) and β-oxidation (B) in hepatocytes with different treatments. None of these above shown treated groups versus HFD-C (high fat diet control) were statistically significant. 6

S-Fig. 6 Human data for serum lipid profile parameters from milder/subnormal (regarded as control) (n=5) and severe (n=5) steatotic liver samples. None of the above values are statistically significant. 7