Interactions between Fluoroquinolones and lipids: Biophysical studies
|
|
- Horatio Barrett
- 5 years ago
- Views:
Transcription
1 Louvain Drug Research Institute Cellular and Molecular Pharmacology Unit Interactions between Fluoroquinolones and lipids: Biophysical studies Hayet BENSIKADDOUR May 25 th, 2011 Promoter Prof. Marie-Paule Mingeot-Leclercq
2 Plan of the presentation I- Introduction Pharmacology of fluoroquinolones Mechanism of resistance of fluoroquinolones: efflux pumps phenomenom II- Aims of the Thesis III- Materials and Methods IV- Results Investigation of the interaction of two fluoroquinolones (CIP and MXF) with model lipid membranes Bensikaddour et al., 2008: Biophysical Journal 94: Investigation of the interaction of CIP with eukaryotic and prokaryotic model lipids membranes (DPPC vs DPPG) V- General Conclusion VI- Perspectives Bensikaddour et al., 2008: Biochimica et Biophysica Acta 1778:
3 I- Introduction Pharmacology of Fluoroquinolones Synthetic origin compounds: Quinoline ring and Fluor atom at R 6 R 5 O Bactericide activity R 6 COOH Based on chemical structure and antibacterial activity: 3 generations R 7 X N R 8 R 1-1st generation (Quinolones) Treatment of urinary tract infections ( ) - 2 nd generation Systematic use in the ( ) - 3 rd generation Treatment of respiratory tract infections (from1990-xxxx)
4 I- Introduction Pharmacology of fluoroquinolones Bacterial targets are DNA gyrase and Topoisomerase IV.
5 Plasma membrane I- Introduction Mechanisms of resistance Gram-negative bacteria FQs Porins Efflux pumps Bacteria target (DNA) Peptidoglycan Outer membrane Resistance due to target enzymes mutation: - mutations in topoisomerase IV (ParC or ParE) - mutations in DNA gyrase (GyrA or GyrB) - resistance due to a protective mechanism (ex. plasmid qnr) - Resistance due to altered access of drug to target enzymes: Difficulty to diffuse through the membrane Efflux system (efflux pumps in bacteria ex: AcrAB-TolC of E.coli )
6 I- Introduction Previous studies on accumulation of CIP and MXF + MRP inhibitors Eukaryotic cells J774 macrophages cells - MRP inhibitors Efflux pumps CIP Efflux pumps CIP Plasma membrane Plasma membrane MXF MXF MRP inhibitors had no effect on the accumulation of MXF Intracellular accumulation MRP inhibitors increase the accumulation of CIP Accumulation of MXF >>>CIP Michot et al. (2004, 2005), Marquez et al.,( 2009).
7 I-Introduction Gram-positive bacteria Gram-negative bacteria Eukaryotic cells Plasma membrane FQs Porins Efflux pumps Bacteria target (DNA) FQs Peptidoglycan Outer membrane To reach intracellular bacteria target, CIP and MXF interact with membrane lipids bilayer: where they can be recognized by the efflux pumps proteins in eukaryotic cells and /or the porins and efflux pumps proteins in prokaryotic cells Investigation of interaction of FQs with model membranes at molecular level
8 II- Aims of Thesis Characterize the effect of two fluoroquinolones, CIP and MXF, on the physicochemical properties of the major phospholipids of both the eukaryotic and prokaryotic membranes: Investigation of the interaction of two fluoroquinolones (CIP and MXF) with model lipid membranes. Investigation of the interaction of CIP with eukaryotic and prokaryotic model lipids membranes (DPPC vs DPPG). Bensikaddour-Thesis-2011
9 III- Materials and methods Antibiotics: CIP and MXF Zwitterionic phospholipids (Eukaryotic cells: DOPC, DPPC) Anionic phospholipids (Prokaryotic cells: DPPG)
10 III- Materials and methods Models of lipids membranes air monolayer (i) water bilayer (ii) Multilamellar vesicle (MLV) (up to nm) (iii) Giant unilamellar vesicle (GUV) (5-300µm) Large unilamellar vesicle (LUV) (> nm) Small unilamellar vesicle (SUV)(20-50 nm)
11 III- Materials and methods i) Atomic Force Microscopy (AFM) Photodetector laser Sample magnetic steel disc scanner Measure the forces resulting from different interactions between a tip, which is attached to a cantilever and the atoms of the sample surface.
12 i) Atomic Force Microscopy How it s work? Tip Sample Transverse section Mica Surface topography Lipid domain structure
13 ii) Langmuir-Blodgett technology (LB) Dipper Electro balance Pressure sensor Amphiphile monolayer Aqueous subphase Barrier position sensor Solid substrate Moveable Barrier Teflon trough Measure the surface pressure/area (π-a) of monomolecular layer upon compression
14 ii) Pressure/area (π-a) isotherm curve for a phospholipid monolayer Collapsed monolayer Condensed state Solide Surface pressure (mn/m) Liquid Condensed LE-LC Liquid Expanded Gaz Fluid state Gaseous state Area per molecule (Å 2 ) Compression of lipids ( molecular area ) lateral pressure Lipid molecular arrangement Lipid state transition Lipid packing
15 iii) Fourier Transform Infrared Spectroscopy (FTIR) H H H H C C Stretching vibrations (~2850 cm -1 ) Bending vibrations (~1450 cm -1 ) Sample Outgoing Incoming beam Germanium Plate IR beam is focused into the ATR crystal witch is covered with lipid layer The light travels inside the plate by internal reflections from one surface of the plate to the other Absorption of the energy by the sample provides ATR-FTIR spectra and information about the structure of the system.
16 iii) Fourier Transform Infrared Spectroscopy (FTIR) Increase Temperature At T<Tm Crystal state At T>Tm Fluid state H H C Phospholipid Stretching vibrations (~2850 cm -1 ) A Kink bend H H C α Bending vibrations (~1450 cm -1 ) Non polarized spectra for : - state behavior (CH 2 asymmetric and symmetric stretching bands cm -1 ) - conformation determination of lipids: (CH 2 wagging bands (1400 cm -1 )) Polarized spectra for determination of lipids orientation: Dichroism measurements of the CH 2 wagging band (1400 cm -1 ))
17 iv) Nuclear Magnetic Resonance spectroscopy (NMR) Chemical shift anisotropy σ Bilayer LUV liposome σ= σ // -σ σ // : The low field shoulder σ : The high field peak (ppm) Mobility of phosphate heads of phospholipids Drug effect on the orientation of phospholipids head groups ( 31 P NMR).
18 v) Steady state anisotropy fluorescence Anisotropy x x x x10-6 [sample] M r = (I // - I ) /(I // +2 I ) L free => r=r 0 L bound + R => r Binding parameters of drugs to lipids (stoichiometry, affinity)
19 IV- Results i) Investigation of the interaction of two fluoroquinolones (CIP and MXF) with model lipid membranes Chapter I
20 CIP a) Effect of FQs on the membrane organization AFM Studies (Collaboration with Pr Y. Defrene ( UCL) MXF DPPC DOPC CIP Area (µm 2 ) MXF Time (min) i) MXF induced in a more (57%) extent than CIP (27%), an erosion of the DPPC domains in the DOPC fluid phase
21 b) FQs stability within a lipid monolayer / compressibility Langmuir studies (Collaboration with Dr M. Deleu (FSAG, Gembloux)) CIP MXF 50 a) 50 b) Surface pressure (mn/m) Surface pressure (mn/m) Molecular area (A 2 /molecule) Molecular area (A 2 /molecule) ii) MXF induced a higher shift of the surface pressure-area isotherms of DOPC:DPPC:FQs monolayer towards the lower area per molecule as compared to CIP.
22 c) ATR-FTIR Data analysis (Collaboration with Pr E.Goormaghtigh (SFMB, ULB) Conformation analysis Non polarized spectra of DPPC and DPPC:FQS with molar ratio of 1:1 Orientation analysis Dichroic spectra (A // - A ) of DPPC and DPPC: FQs with molar ratio of 1:1
23 C i) Conformation analysis Non polarized spectra of drug, DPPC and DPPC:FQS with molar ratio of 1:1 a) cm cm -1 DPPC:MXF H H Absorbance (A.U) cm cm -1 DPPC:CIP DPPC CIP C HCH bend wagging (~1450 cm _1 ) MXF Wavenumber (cm -1 ) The drug spectrum appeared in the DPPC: drug mixture spectrum, notably at 1630 cm -1. In DPPC: drug spectra, the DPPC ν(c=o) band at 1736 cm -1 was modified in terms of frequency and shape a modification of the interfacial lipid carbonyl groups
24 C i) Conformation analysis Analysis of the lipid C-H wagging (ν w (CH 2 )) Information on the proportion of the chains in the all-trans conformation b) No Polarize spectra at 1200 cm-1 Area (A.U) CIP A Kink bend 30 MXF ,2 1-0, DPPC:Drug (Molar ratio) Area evolution of DPPC peak at cm -1 as function of increasing amounts of FQs : 60% for CIP, 72% for MXF. The all-trans configuration of the alkyl chain of DPPC decreased more in the presence of MXF.
25 C ii) Orientation analysis Dichroic spectra (A // - A ) of DPPC and DPPC: FQs with molar ratio of 1:1 E// IR radiation a) DPPC:MXF) 1630 cm cm-1 detector E x E z θ Absorbance(A.U) DPPC:CIP) DPPC) 1630 cm-1 Wagging Bands E y Evanescent wave ATR-crystal sample H d p ~1 µm H E -100 C Wavenumber (cm-1) HCH bend wagging (~1450 cm _1 ) The dichroic spectra of DPPC:FQs mixture displayed strong dichroism for bands assigned to the drug (at 1630 and 1465 cm -1 ) a well-organized, well-defined orientation of the drug in the DPPC bilayer.
26 C ii) Orientation analysis Analysis of the lipid C-H wagging (ν w (CH 2 )) band Estimation of the orientation of the lipid acyl chain Absorbance (A.U) b) MXF CIP Plate normal γ Membrane β normal α Molecular axis dipole :00 01:00,2 01:00,5 01:01 01:02 α DPPC:Drug (molar ratio) Area evolution of the wagging band ν w (CH 2 ) of DPPC as a function of lipid:drug molar ratio, indicated : - 60% of the area for CIP, 30% for MXF. - The tilt between the acyl chain of DPPC and a normal at the germanium surface was (27 ) in the presence of CIP and remained unchanged (20 ) in the presence of MXF MXF induced less disorder than CIP
27 Summary 1 α CIP + Phospholipids (DPPC) area per molecule MXF + area per molecule MXF induced in a more extent than CIP an erosion of the DPPC domains in the DOPC fluid phase. MXF induced a higher shift of the surface pressure-area isotherms of DOPC: DPPC: FQs monolayer towards the lower area per molecule as compared to CIP. MXF had a higher tendency to decrease the number of all-trans conformation, as compared to CIP. CIP induced a disorder and modifies the orientation of the acyl chain. Bensikaddour et al., 2008: Biophysical Journal 94:
28 ii) Investigation of the interaction of CIP with eukaryotic and prokaryotic model lipids membranes (DPPC vs DPPG) Chapter II
29 Phospholipids composition (%) of bacteria membrane and humain cells membrane Lipid Eukaryotic cells Prokaryotic cells Human alveolar macrophages Human Erythrocyte membrane Pseudomonas aeruginosa Staphylococcus aureus Staphylococcus pneumoniae PE PC PS Traces PG+CL PI+PA - - SM Chol Others 13.2 The bacterial membranes are composed largely of anionic lipids (PG). The eukaryotic cell membranes are rich with zwitterionic lipids. Wolkers et al., (2002), Epand et al. (2007), Lohner and Prenner, (1999).
30 1) Binding of CIP to Lipids a ) Size of LUVs in the presence of CIP by quasi-elastic light scattering Lipid-Drug Molar ratio Average size (nm) LUV 1:0 1:0.2 DPPC 101±1 100±1 DPPG 124±1 155±2 1:0.5 98±1 195±2 1:1 105±1 256±5 CIP increased the size of DPPG liposomes
31 a ) Binding of CIP to Lipids by steady state anisotropy titration [CIP] = 5 µm 0,40 0,35 0,30 Anisotropy 0,25 0,20 0,15 0, [DPPG] µm r = (I // - I ) /(I // +2 I ) K app = (8.6±0.5) 10 5 M -1
32 a) Binding parameters of CIP with Lipids vesicles LUV liposomes Composition DPPG Zeta potential (mv) -(66 ± 4) (83 ± 12 %) K app (10 5 M -1 ) 8.6±0.5 DPPC -(5 ± 1) (96 ± 5 %) 2.5±0.1 DOPC:DPPG (1:1, M:M) -(34 ± 4) (100%) 3.2±0.9 DOPC:DPPC (1:1, M:M) -(6 ± 1) (100%) 1.1±0.2 CIP has more affinity for negative charged liposomes (DPPG Vs DPPC)
33 2) CIP effect on the membrane mobility (Collaboration with Pr K. Snoussi (CHIM, UCL)) i) DPPG DPPG alone DPPG:CIP (1:1, M:M) σ=25.5±0.5 ppm σ=34.0±1.0 ppm The difference of σ of DPPG:CIP and DPPG is 9 ppm
34 2) CIP effect on the membrane mobility ii) DPPC DPPC alone DPPC:CIP (1:1, M:M) σ=41.5±0.5 ppm σ=46.6±0.1 ppm The difference of σ of DPPC:CIP and DPPC is 5 ppm
35 3) CIP effect on the thermotropic behavior of lipids Melting temperature of lipid by ATR-FTIR Increase Temperature H H H H At T<Tm Crystal state At T>Tm Fluid state C C CH 2 symmetric at 2800 cm -1 CH 2 asymmetric at 3000 cm -1 CH 2 Stretching vibrations Evolution of stretching vibration bands of CH 2 of DPPG as function of temperature in the presence of CIP in Tris 10mM buffer, ph 7,4 0,30 0,25 Absorbance (A.U) 0,20 0,15 0,10 0,05 0, T=50 C T=47 C T=46 C T=45 C T=44 C T=43 C T=42 C T=41 C T=40 C T=39 C T=38 C T=37,5 C T=35 C T=32,5 C T=30 C T=27,5 C T=25 C T=22,5 C T=20 C Wavenumber (cm -1 )
36 3) CIP effect on thermotropic curve of DPPG and DPPC CH 2 asymmetric stretching band Melting temperature of DPPG and DPPG:CIP (1:1) Melting temperature of DPPC and DPPC:CIP (1:1) 2922 DPPG alone 2922 DPPC alone Wavenumber (cm -1 ) DPPG:CIP(1:1) Wavenumber (cm -1 ) DPPC:CIP (1:1) Temperature (C ) Temperature (C ) Tm(DPPG)= 40 C, Tm(DPPC)=42 C CIP did not affect dramatically the DPPC melting curve CIP : order of acyl chain of DPPG < Tm order of acyl chain of DPPG >Tm
37 4) Assembly of CIP with phospholipids by molecular modeling (Collaboration with Dr L. Lins (CBMN, Gembloux) DPPC:CIP (1:1, M:M) DPPG:CIP (1:1, M:M) A B E = Kcal/mol E = Kcal/mol => The interaction of DPPG:CIP is more stable than DPPC:CIP
38 Summary 2 Increase Temperature At T<Tm DPPG At T>Tm CIP DPPC The results showed that ciprofloxacin: had more affinity to the negatively charged lipid reduced more the mobility of DPPG than DPPC had no dramatically effect on the melting curve of DPPC decreased the order of acyl chain of DPPG at pre-transition temperature and increased the order at post-transition temperature Bensikaddour et al., 2008: Biochimica et Biophysica Acta 1778:
39 V- General Conclusion MXF CIP b a? CIP and MXF had an effect on physicochemical properties of lipids MXF seems primarily to have a packing effect CIP modifies the orientation of acyl-chain and has more affinity to the anionic lipid Different effects that we observed between CIP and MXF on lipids probably reflect a difference in their localization into the lipid bilayer
40 VI- Perspectives Relationship between the membrane composition and the permeability of these compounds (CIP and MXF) by the Parallel Artificial Membrane Permeability Assay Molecular modeling of MRP4 protein in the lipid bilayer in the absence and the presence of either CIP or MXF Are there correlation between lipid composition and efflux pumps expression? protein Determination of the lipids composition in J774 cells wild type and those overexpressed MRP4 protein (resistant to CIP) An alteration in the sphingolipids composition was observed: an increased level of GluCer, and a decreased content in Cer and in SM (Bensikaddour et al., Unpublished data)
41 VI- Perspectives Application to others fluoroquinolones (role of lipophilicity, the basic function (piperazine)) F CH 3 O COOH F O COOH H 3 C N N N N HN HO CH 3 Grepafloxacin (Log P=2.48) nadifloxacin
42 Acknowledgements Pr M-P. Mingeot-Leclercq My Family Pr P. Tulkens, Pr F. Van Bambeke Pr E. Goormaghtigh (SFMB, ULB, Brussels) Pr K. Snoussi (CHIM,UCL, Louvain-la-Neuve) Dr L. Lins (CBMN, Gembloux) Pr M. Fillet (ULg, Liège) FACM S members
43 Thanks' for your attention!
Chemical Surface Transformation 1
Chemical Surface Transformation 1 Chemical reactions at Si H surfaces (inorganic and organic) can generate very thin films (sub nm thickness up to µm): inorganic layer formation by: thermal conversion:
More informationPhysical Cell Biology Lecture 10: membranes elasticity and geometry. Hydrophobicity as an entropic effect
Physical Cell Biology Lecture 10: membranes elasticity and geometry Phillips: Chapter 5, Chapter 11 and Pollard Chapter 13 Hydrophobicity as an entropic effect 1 Self-Assembly of Lipid Structures Lipid
More informationBacterial adhesion is important for understanding biofilm formation, pathogen and contaminant transport, and bioremediation of soil and water. Bacterial adhesion represents the attachment of the bacteria
More informationPressure Modulation of the Enzymatic Activity of. Phospholipase A2, a Putative Membraneassociated
SUPPORTING INFORMATION Pressure Modulation of the Enzymatic Activity of Phospholipase A2, a Putative Membraneassociated Pressure Sensor Saba Suladze, Suleyman Cinar, Benjamin Sperlich, and Roland Winter*
More informationPolarization and Circular Dichroism (Notes 17)
Polarization and Circular Dichroism - 2014 (Notes 17) Since is vector, if fix molec. orient., E-field interact (absorb) with molecule differently when change E-orientation (polarization) Transitions can
More informationPhase Transition Behaviours of the Supported DPPC Bilayer. Investigated by Sum Frequency Generation (SFG) and Atomic Force
Electronic Supplementary Material (ESI) for Physical Chemistry Chemical Physics. This journal is the Owner Societies 2015 Supporting Information for Phase Transition Behaviours of the Supported DPPC Bilayer
More informationLiquid crystals; biological and artificial membranes
Liquid crystals; biological and artificial membranes Dr. István Voszka Liquid crystals: Intermediate state between liquids and crystalline solids anisotropic liquids. (anisotropy = the physical properties
More informationThe Transport and Organization of Cholesterol in Planar Solid-Supported Lipid Bilayer Depend on the Phospholipid Flip-Flop Rate
Supporting Information The Transport and Organization of Cholesterol in Planar Solid-Supported Lipid Bilayer Depend on the Phospholipid Flip-Flop Rate Ting Yu, 1,2 Guangnan Zhou, 1 Xia Hu, 1,2 Shuji Ye
More informationPhotochemical Applications to the Study of Complexity Phospholipid Bilayer Environments
Virginia Commonwealth University VCU Scholars Compass Theses and Dissertations Graduate School 2006 Photochemical Applications to the Study of Complexity Phospholipid Bilayer Environments Christopher John
More informationNeutron reflectivity in biology and medicine. Jayne Lawrence
Neutron reflectivity in biology and medicine Jayne Lawrence Why neutron reflectivity studies? build up a detailed picture of the structure of a surface in the z direction n e u tro n s in n e u tro n s
More informationPaper 4. Biomolecules and their interactions Module 22: Aggregates of lipids: micelles, liposomes and their applications OBJECTIVE
Paper 4. Biomolecules and their interactions Module 22: Aggregates of lipids: micelles, liposomes and their applications OBJECTIVE The main aim of this module is to introduce the students to the types
More informationAFM In Liquid: A High Sensitivity Study On Biological Membranes
University of Wollongong Research Online Faculty of Science - Papers (Archive) Faculty of Science, Medicine and Health 2006 AFM In Liquid: A High Sensitivity Study On Biological Membranes Michael J. Higgins
More informationORGANIZATION OF ANTIBIOTIC AMPHOTERICIN B IN MODEL LIPID MEMBRANES. A MINI REVIEW
CELLULAR & MOLECULAR BIOLOGY LETTERS Volume 8, (2003) pp 161 170 http://www.cmbl.org.pl Received 30 September 2002 Accepted 13 February 2003 ORGANIZATION OF ANTIBIOTIC AMPHOTERICIN B IN MODEL LIPID MEMBRANES.
More informationBiology 5357: Membranes
s 5357 Biology 5357: s Assembly and Thermodynamics of Soft Matter Paul H. MD, PhD Department of Cell Biology and Physiology pschlesinger@.wustl.edu 362-2223 Characteristics s 5357 s are polymorphic s 5357
More information3.1 Background. Preformulation Studies
Preformulation Studies 3.1 Background Delivery of any drug requires a suitable dosage form to get optimum therapeutic effects. The development of such dosage forms fundamental properties of the drug molecule
More informationBiological Membranes. Lipid Membranes. Bilayer Permeability. Common Features of Biological Membranes. A highly selective permeability barrier
Biological Membranes Structure Function Composition Physicochemical properties Self-assembly Molecular models Lipid Membranes Receptors, detecting the signals from outside: Light Odorant Taste Chemicals
More informationPlasma membrane structure and dynamics explored via a combined AFM/FCS approach
Plasma membrane structure and dynamics explored via a combined AFM/FCS approach Salvatore Chiantia Molekulare Biophysik, Dept. Of Biology Humboldt-Universität zu Berlin Dresden nanoseminar, May 2013 Outline
More informationProtein directed assembly of lipids
Protein directed assembly of lipids D. Nordin, O. Yarkoni, L. Donlon, N. Savinykh, and D.J. Frankel SUPPLEMENTARY MATERIAL Materials and Methods Supported bilayer preparation 1,2-dioleoyl-sn-glycero-3-phosphocholine
More informationElectronic Supporting Information
Modulation of raft domains in a lipid bilayer by boundary-active curcumin Manami Tsukamoto a, Kenichi Kuroda* b, Ayyalusamy Ramamoorthy* c, Kazuma Yasuhara* a Electronic Supporting Information Contents
More informationChapter 12: Membranes. Voet & Voet: Pages
Chapter 12: Membranes Voet & Voet: Pages 390-415 Slide 1 Membranes Essential components of all living cells (define boundry of cells) exclude toxic ions and compounds; accumulation of nutrients energy
More informationThe Cell Membrane (Ch. 7)
The Cell Membrane (Ch. 7) Phospholipids Phosphate head hydrophilic Fatty acid tails hydrophobic Arranged as a bilayer Phosphate attracted to water Fatty acid repelled by water Aaaah, one of those structure
More informationSupporting Information. Magnetic Field and Chirality Effects on Electrochemical Charge Transfer Rates: Spin. Dependent Electrochemistry
Supporting Information Magnetic Field and Chirality Effects on Electrochemical Charge Transfer Rates: Spin Dependent Electrochemistry Prakash Chandra Mondal, 1 Claudio Fontanesi, 1,2 David H. Waldeck,
More informationMethods and Materials
a division of Halcyonics GmbH Anna-Vandenhoeck-Ring 5 37081 Göttingen, Germany Application Note Micostructured lipid bilayers ANDREAS JANSHOFF 1), MAJA GEDIG, AND SIMON FAISS Fig.1: Thickness map of microstructured
More informationAdvanced Cell Biology. Lecture 28
Advanced Cell Biology. Lecture 28 Alexey Shipunov Minot State University April 8, 2013 Shipunov (MSU) Advanced Cell Biology. Lecture 28 April 8, 2013 1 / 41 Outline Questions and answers Shipunov (MSU)
More informationPhosphatidylcholines are a class of glycerophospholipids which along with other phospholipids
Phosphatidylcholine Phosphatidylcholines are a class of glycerophospholipids which along with other phospholipids account for more than half of the lipids in most membranes. Phosphatidylcholines can further
More informationAdvanced Cell Biology. Lecture 28
Alexey Shipunov Minot State University March 30, 2012 Outline Questions and answers Outline Questions and answers Questions and answers Previous final question: the answer How to make a transgenic organism
More informationOXIDATIVE STRESS STUDIES ON LIPID MODEL MEMBRANES
OXIDATIVE STRESS STUDIES ON LIPID MODEL MEMBRANES MARCELA ELISABETA BARBINTA-PATRASCU *, LAURA TUGULEA * * Faculty of Physics, University of Bucharest, Romania Received December 21, 2004 The liposomes
More informationBiology 4410 First Examination Version B
Biology 4410 Spring 2006 Name First Examination Version B This examination consists of two parts, a multiple-choice section and an essay section. Be sure to put your name on both the mark-sense sheet and
More informationChapter 1 Membrane Structure and Function
Chapter 1 Membrane Structure and Function Architecture of Membranes Subcellular fractionation techniques can partially separate and purify several important biological membranes, including the plasma and
More informationRaman spectroscopy methods for detecting and imaging supported lipid bilayers
Spectroscopy 24 (2010) 113 117 113 DOI 10.3233/SPE-2010-0426 IOS Press Raman spectroscopy methods for detecting and imaging supported lipid bilayers Claire S. Sweetenham and Ioan Notingher Nanoscience
More informationSupplementary Figure 1. Overview of steps in the construction of photosynthetic protocellular systems
Supplementary Figure 1 Overview of steps in the construction of photosynthetic protocellular systems (a) The small unilamellar vesicles were made with phospholipids. (b) Three types of small proteoliposomes
More informationPolyoxometalate Macroion Induced Phase and Morphology
Polyoxometalate Macroion Induced Phase and Morphology Instability of Lipid Membrane Benxin Jing a, Marie Hutin c, Erin Connor a, Leroy Cronin c,* and Yingxi Zhu a,b,* a Department of Chemical and Biomolecular
More informationStructure and Phase Behaviour of Binary Mixtures of Cholesterol with DPPC and DMPC
Chapter 3 Structure and Phase Behaviour of Binary Mixtures of Cholesterol with DPPC and DMPC 3.1 Introduction As discussed in chapter 1, phospholipids and cholesterol are important constituents of plasma
More informationFood protein powders classification and discrimination by FTIR spectroscopy and principal component analysis
APPLICATION NOTE AN53037 Food protein powders classification and discrimination by FTIR spectroscopy and principal component analysis Author Ron Rubinovitz, Ph.D. Thermo Fisher Scientific Key Words FTIR,
More informationApparatus for the Continuous Monitoring of Surface Morphology via Fluorescence Microscopy during Monolayer Transfer to Substrates
Langmuir 1998, 14, 2567-2572 2567 Apparatus for the Continuous Monitoring of Surface Morphology via Fluorescence Microscopy during Monolayer Transfer to Substrates Ka Yee C. Lee, Michael M. Lipp, Dawn
More informationThermally induced micro-domain formation in fatty acid Langmuir/Blodgett films observed by attenuated total reflectance infrared spectroscopy
Colloids and Surfaces A: Physicochem. Eng. Aspects 219 (2003) 125/145 www.elsevier.com/locate/colsurfa Thermally induced micro-domain formation in fatty acid Langmuir/Blodgett films observed by attenuated
More informationTumor Targeting of Functionalized Quantum Dot- Liposome Hybrids by Intravenous Administration
Tumor Targeting of Functionalized Quantum Dot- Liposome Hybrids by Intravenous Administration Wafa T. Al-Jamal 1, Khuloud T. Al-Jamal 1, Bowen Tian 1, Andrew Cakebread 2, John M. Halket 2 and Kostas Kostarelos
More informationSupplementary Figures
Supplementary Figures Absorption 4 3 2 1 Intensity Energy U(R) relaxation ~~~ ~~~~~~ 2 3 4 1 S S 1 2 3 4 1 Fluoescence 4 3 2 1 Intensity H-aggregation ~~~~ J-aggregation Absorption Emission Vibrational
More informationWeek 5 Section. Junaid Malek, M.D.
Week 5 Section Junaid Malek, M.D. HIV: Anatomy Membrane (partiallystolen from host cell) 2 Glycoproteins (proteins modified by added sugar) 2 copies of RNA Capsid HIV Genome Encodes: Structural Proteins
More informationRETINOID-PHOSPHOLIPID INTERACTIONS AS STUDIED BY MAGNETIC RESONANCE. Stephen R. Wassail* and William Stillwellt
Vol.''% No. 3 85 RETINOID-PHOSPHOLIPID INTERACTIONS AS STUDIED BY MAGNETIC RESONANCE Stephen R. Wassail* and William Stillwellt Departments of Physics* and Biology+ Indiana University-Purdue University
More informationReconstruction of a transmembrane protein tetraspanin (CD9) into lipid bilayer by interaction of ganglioside GM3 and tetraspanin
Reconstruction of a transmembrane protein tetraspanin (CD9) into lipid bilayer by interaction of ganglioside GM3 and tetraspanin Glycobiology World Congress August 12, 2015 Tokyo University of Science,
More information8 Influence of permeation modulators on the behaviour of a SC lipid model mixture
8 Influence of permeation modulators on the behaviour of a SC lipid model mixture 8.1 Introduction In the foregoing parts of this thesis, a model membrane system of SC lipids has been developed and characterized.
More informationSAXS on lipid structures
Practical Course in Biophysics, Experiment R2b SAXS on lipid structures Summer term 2015 Room: Advisor: X-ray lab at LS Rädler, NU111 Stefan Fischer Tel: +49-(0)89-2180-1459 Email: stefan.f.fischer@physik.lmu.de
More informationUsing Infrared and Raman Microspectroscopies to Compare Ex Vivo Involved Psoriatic Skin and Normal Human Skin
Using Infrared and Raman Microspectroscopies to Compare Ex Vivo Involved Psoriatic Skin and Normal Human Skin Leroy, Marie (Laboratoire d'ingénierie de Surface (LIS)) Lefèvre, Thierry (Groupe de recherche
More informationLipid Bilayer Based Binding Surfaces for Nucleic Acids
Lipid Bilayer Based Binding Surfaces for Nucleic Acids Caitlin Kreutz Major: Biology Mentor: Emin Oroudjev Faculty Advisor: Helen Hansma Funding By: National Institutes of Health July 28 th, 2005 Main
More informationinduced inactivation of lung surfactants
Albumin-induced induced inactivation of lung surfactants RET Intern: Danielle Petrey,, funded by NSF Mentor: Patrick Stenger PI: Joe Zasadzinski Funding: NIH What is lung surfactant? Lipid and protein
More informationGraphene Quantum Dots-Band-Aids Used for Wound Disinfection
Supporting information Graphene Quantum Dots-Band-Aids Used for Wound Disinfection Hanjun Sun, Nan Gao, Kai Dong, Jinsong Ren, and Xiaogang Qu* Laboratory of Chemical Biology, Division of Biological Inorganic
More informationStructure-Transport Relationship in Organized Soft Matter Systems by Diffusion NMR. Sergey Vasenkov
Structure-Transport Relationship in Organized Soft Matter Systems by Diffusion NMR Sergey Vasenkov Outline Combining advantages of high field and high gradients in diffusion NMR Relationship between diffusivities
More informationCHAPTER 4 CELL STRUCTURE/FUNCTION. 2. The uses the visible light to illuminate cell. 3. How is the magnification of a compound microscope calculated?
CHAPTER 4 CELL STRUCTURE/FUNCTION 1. Define magnification and the term resolution. 2. The uses the visible light to illuminate cell. 3. How is the magnification of a compound microscope calculated? 4.
More informationTUTORIAL IN SMALL ANGLE X-RAY SCATTERING ANALYSIS
TUTORIAL IN SMALL ANGLE X-RAY SCATTERING ANALYSIS at the Abdus Salam International Center of Theoretical Physics (ICTP) Heinz Amenitsch Sigrid Bernstorff Michael Rappolt Trieste, 15. May 2006 (14:30-17:15)
More information0.5 nm nm acyl tail region (hydrophobic) 1.5 nm. Hydrophobic repulsion organizes amphiphilic molecules: These scales are 5 10xk B T:
Lecture 31: Biomembranes: The hydrophobic energy scale and membrane behavior 31.1 Reading for Lectures 30-32: PKT Chapter 11 (skip Ch. 10) Upshot of last lecture: Generic membrane lipid: Can be cylindrical
More informationKinetic model of the biomass hydrolysis by polysulfone. membrane with chemically linked acidic ionic liquids via.
Electronic Supplementary Material (ESI) for RSC Advances. This journal is The Royal Society of Chemistry 2018 Kinetic model of the biomass hydrolysis by polysulfone membrane with chemically linked acidic
More informationKinetic Pathway of Antimicrobial Peptide Magainin 2-Induced Pore Formation in Lipid Membranes
ISSP International Workshop on Soft Matter Physics: Biomembranes and Vesicles on 24 Aug. 2010, at IPMU Lecture Hall Kinetic Pathway of Antimicrobial Peptide Magainin 2-Induced Pore Formation in Lipid Membranes
More informationChapter 4 Prokaryotic Profiles
Chapter 4 Prokaryotic Profiles Topics: External Structures Cell Envelope Internal Structures Cell Shapes, Arrangement, and Sizes Prokaryotes are unicellular organisms Prokaryotes include two small groups
More informationChapter 12: Mass Spectrometry: molecular weight of the sample
Structure Determination: hapter 12: Mass Spectrometry- molecular weight of the sample; formula hapter 12: Infrared Spectroscopy- indicated which functional groups are present hapter 13: Nuclear Magnetic
More informationBorchman, Foulks, Yappert
Spectroscopic Characterization of Human Meibum Borchman, Foulks, Yappert Prof. Marta Yappert Dr. Gary Foulks Composition Structure Function Composition Structure Function Tear Film Lipid Layer
More informationMembrane interactions of lipopeptides and saponins, two groups of natural amphiphiles
Membrane interactions of lipopeptides and saponins, two groups of natural amphiphiles J. Lorent (public defence) Main supervisor : M-P. Mingeot-Leclercq (FACM) Co-supervisor : J. Quetin-Leclercq (GNS)
More informationFluid Mozaic Model of Membranes
Replacement for the 1935 Davson Danielli model Provided explanation for Gortner-Grendel lack of lipid and permitted the unit membrane model. Trans membrane protein by labelling Fry & Edidin showed that
More informationSupplementary Materials for
advances.sciencemag.org/cgi/content/full/2/12/e1601838/dc1 Supplementary Materials for General and programmable synthesis of hybrid liposome/metal nanoparticles Jin-Ho Lee, Yonghee Shin, Wooju Lee, Keumrai
More informationLipids and Membranes
Lipids and Membranes Presented by Dr. Mohammad Saadeh The requirements for the Pharmaceutical Biochemistry I Philadelphia University Faculty of pharmacy Biological membranes are composed of lipid bilayers
More informationCHAPTER 4. Tryptophan fluorescence quenching by brominated lipids
CHAPTER 4 Tryptophan fluorescence quenching by brominated lipids 102 4.1 INTRODUCTION The structure and dynamics of biological macromolecules have been widely studied with fluorescence quenching. The accessibility
More informationModel for measurement of water layer thickness under lipid bilayers by surface plasmon resonance
Model for measurement of water layer thickness under lipid bilayers by surface plasmon resonance Koyo Watanabe Unit of Measurement Technology, CEMIS-OULU, University of Oulu, PO Box 51, 87101 Kajaani,
More informationVibrational spectroscopy study of starch and cell wall polysaccharide structures. N Wellner Institute of Food Research Norwich, UK
Vibrational spectroscopy study of starch and cell wall polysaccharide structures N Wellner Institute of Food Research Norwich, UK Outline IR spectroscopy, normal modes and molecular structure Composition
More informationmembranes membrane functions basic structure membrane functions chapter 11-12
membranes chapter - membrane functions Ca + hormone IP H + HO compartmentalization intracellular compartments scaffold for biochemical activities organize enzymes selectively permeable membrane allows
More informationInfrared spectroscopy of proteins and peptides in lipid bilayers
Quarterly Reviews of Biophysics 30, 4 (1997), pp. 365 429. 1997 Cambridge University Press Printed in the United Kingdom 365 Infrared spectroscopy of proteins and peptides in lipid bilayers LUKAS K. TAMM
More informationSupplement 2 - Quantifying sample mosaicity
Supplement 2 - Quantifying sample mosaicity Supplementary information for: Order parameters and areas in fluid-phase oriented lipid membranes using wide angle x-ray scattering Thalia T. Mills, Gilman E.
More informationLipids: Membranes Testing Fluid Mosaic Model of Membrane Structure: Cellular Fusion
Models for Membrane Structure NEW MODEL (1972) Fluid Mosaic Model proposed by Singer & Nicholson Lipids form a viscous, twodimensional solvent into which proteins are inserted and integrated more or less
More informationBiology 4410 First Examination Version B
Biology 4410 Spring 2006 Name First Examination Version B This examination consists of two parts, a multiple-choice section and an essay section. Be sure to put your name on both the mark-sense sheet and
More informationCarbohydrates and Lipids
Carbohydrates and Lipids Chapter 5: Macromolecules Macromolecules Smaller organic molecules join together to form larger molecules o macromolecules 4 major classes of macromolecules: o Carbohydrates o
More informationIn vivo Infrared Spectroscopy
In vivo Infrared Spectroscopy Zhe Xia March 29, 2017 Outline Introduction Theory Instrument Case study Conclusion Introduction In vivo: Latin for within the living, In vivo studies focus on the effects
More informationPossible Molecular Mechanism to Account for Wavelength Dependence of Equilibration Rates of Patman and Laurdan in Phosphatidylcholine Bilayers
Brigham Young University BYU ScholarsArchive All Theses and Dissertations 2011-05-12 Possible Molecular Mechanism to Account for Wavelength Dependence of Equilibration Rates of Patman and Laurdan in Phosphatidylcholine
More informationInteractions of Liquid Droplets with Biomembranes
Interactions of Liquid Droplets with Biomembranes Reinhard Lipowsky MPI of Colloids and Interfaces, Potsdam-Golm Intro: Membranes and GUVs GUVs + Aqueous Two-Phase Systems Theory of Fluid-Elastic Scaffolding
More informationChapter 2 Transport Systems
Chapter 2 Transport Systems The plasma membrane is a selectively permeable barrier between the cell and the extracellular environment. It permeability properties ensure that essential molecules such as
More informationP NMR in lipid membranes. CSA recoupling.
31 P NMR in lipid membranes. CSA recoupling. Ludovic BERTHELT, Dror E. WARSCHAWSKI & Philippe F. DEVAUX 1 1 Laboratoire de physico-chimie moléculaire des membranes biologiques UPR 9052 Alpine conference
More informationSpectrum on skin Jonathan Hadgraft & Majella Lane
Spectrum on skin Jonathan Hadgraft & Majella Lane The School of Pharmacy, University of London radiofrequency microwave far infra red uv x rays γ rays log ν / Hz 5 6 7 8 9 10 111213141516171819 20 λ 3km
More informationEffects of Oxidized Phospholipids and Heavy Water on the Structure of Phospholipid Bilayer Membranes
Effects of Oxidized Phospholipids and Heavy Water on the Structure of Phospholipid Bilayer Membranes Quoc Dat Pham Degree Thesis in Chemistry 30 ECTS Master s Level Report passed: 18 th August 2011 Supervisor:
More informationA.Kavitha Assistant professor Department of Botany RBVRR Womens college
A.Kavitha Assistant professor Department of Botany RBVRR Womens college The Ultrastructure Of A Typical Bacterial Cell The Bacterial Cell This is a diagram of a typical bacterial cell, displaying all of
More informationBIOLOGY 111. CHAPTER 3: The Cell: The Fundamental Unit of Life
BIOLOGY 111 CHAPTER 3: The Cell: The Fundamental Unit of Life The Cell: The Fundamental Unit of Life Learning Outcomes 3.1 Explain the similarities and differences between prokaryotic and eukaryotic cells
More informationInsights into the Molecular Organization of Lipids in the Skin Barrier from Infrared Spectroscopy Studies of Stratum Corneum Lipid Models
Acta Derm Venereol 2000; Supp 208: 16±22 Insights into the Molecular Organization of Lipids in the Skin Barrier from Infrared Spectroscopy Studies of Stratum Corneum Lipid Models DAVID J. MOORE and MARK
More informationSelf-Assembly. Lecture 3 Lecture 3 Surfactants Self-Assembly
Self-Assembly Lecture 3 Lecture 3 Surfactants Self-Assembly Anionic surfactants unsaturated omega-3 3 fatty acids rd carbon from the metyl end has double bond saturated Non-ionic surfactants Cationic surfactants
More informationEffects of hydrocarbon chains saturation degree on molecular interaction between phospholipids and cholesterol in mixed monolayers
Indian Journal of Biochemistry & Biophysics Vol. 54, October 2017, pp. 186-190 Effects of hydrocarbon chains saturation degree on molecular interaction between phospholipids and cholesterol in mixed monolayers
More informationSynthesis and Evaluation of Esterified Estolide
Chapter 5 Synthesis and Evaluation of Esterified Estolide 5.1 Introduction Coconut oil has a very high congelation temperature precluding its use as base oil for industrial lubricants in temperate and
More informationCalcium-dependent Hydrolysis of Supported Planar Lipids Were Triggered by honey bee venom Phospholipase A 2 with Right Orientation at Interface
Electronic Supplementary Material (ESI) for Physical Chemistry Chemical Physics. This journal is the Owner Societies 2017 Calcium-dependent Hydrolysis of Supported Planar Lipids Were Triggered by honey
More informationMembrane Structure and Membrane Transport of Small Molecules. Assist. Prof. Pinar Tulay Faculty of Medicine
Membrane Structure and Membrane Transport of Small Molecules Assist. Prof. Pinar Tulay Faculty of Medicine Introduction Cell membranes define compartments of different compositions. Membranes are composed
More informationNa + and Ca 2+ Effect on the Hydration and Orientation of the Phosphate Group of DPPC at Air-Water and Air-Hydrated Silica Interfaces
J. Phys. Chem. B 2010, 114, 9485 9495 9485 Na + and Ca 2+ Effect on the Hydration and Orientation of the Phosphate Group of DPPC at Air-Water and Air-Hydrated Silica Interfaces Nadia N. Casillas-Ituarte,
More informationChapter 9 - Biological Membranes. Membranes form a semi-permeable boundary between a cell and its environment.
Chapter 9 - Biological Membranes www.gsbs.utmb.edu/ microbook/ch037.htmmycoplasma Membranes form a semi-permeable boundary between a cell and its environment. Membranes also permit subcellular organization
More informationEffects of Cholesterol on Membranes: Physical Properties
Effects of Cholesterol on Membranes: Physical Properties Removes gel to liquid crystal phase transition New intermediate phase called liquid ordered - ordering of the membrane lipids due to condensation
More informationChem Lecture 8 Lipids and Cell Membranes
Chem 452 - Lecture 8 Lipids and Cell Membranes 111114 Like carbohydrates, lipids are one of the four major classes of biomolecules, which also include the proteins, carbohydrates and nucleic acids. Lipids
More informationDivision Ave High School Ms. Foglia AP Biology
The Cell Membrane Phospholipids Phosphate head hydrophilic Fatty acid tails hydrophobic Arranged as a bilayer Phosphate attracted to water Fatty acid repelled by water 2007-2008 Aaaah, one of those structure
More informationHow we see cells Hooke saw cork cells (plant cell) underneath a microscope and described them as cells
Biology How we see cells Hooke saw cork cells (plant cell) underneath a microscope and described them as cells a microscope that uses a beam of accelerated electrons as a source of illumination Because
More informationNano-Structuring and Molecular Domain Organizations in Lipid-Protein Membranous Interfaces
A. Méndez-Vilas and J. Díaz (Eds.) FORMATEX 2007 Nano-Structuring and Molecular Domain Organizations in Lipid-Protein Membranous Interfaces Kaushik Nag 1,2*, Amiya K. Panda 3, Ravi Devraj 1 and Mauricia
More informationPulmonary Surfactant. Jian kang, M.D. Pediatric PGY-2
Pulmonary Surfactant Jian kang, M.D. Pediatric PGY-2 Objectives Functions Composition Metabolism Applications Functions To increase pulmonary compliance To prevent the lung from collapsing at the end of
More informationSupporting Information
Supporting Information R6G/8-AQ co-functionalized Fe 3 O 4 @SiO 2 nanoparticles for fluorescence detection of trace Hg 2+ and Zn 2+ in aqueous solution Yao Gu 1,2, Guowen Meng 1,3*, Meiling Wang 1, Qing
More informationIR Spectroscopy Part II
IR Spectroscopy Part II Carbonyl - compounds For simple aldehydes and ketones, the stretching vibration of the carbonyl group is a strong infrared absorption beetwen 1710 and 1740 cm -1. Alkyl substituents
More informationChapter 2 The Chemistry of Life Part 2
Chapter 2 The Chemistry of Life Part 2 Carbohydrates are Polymers of Monosaccharides Three different ways to represent a monosaccharide Carbohydrates Carbohydrates are sugars and starches and provide
More informationBiochimica et Biophysica Acta
Biochimica et Biophysica Acta 1788 (2009) 2160 2168 Contents lists available at ScienceDirect Biochimica et Biophysica Acta journal homepage: www.elsevier.com/locate/bbamem Apolipophorin III interaction
More informationMEMBRANE STRUCTURE. Lecture 8. Biology Department Concordia University. Dr. S. Azam BIOL 266/
1 MEMBRANE STRUCTURE Lecture 8 BIOL 266/4 2014-15 Dr. S. Azam Biology Department Concordia University Plasma Membrane 2 Plasma membrane: The outer boundary of the cell that separates it from the world
More informationElectron-Transfer Properties of Cytochrome c Langmuir-Blodgett Films and Interactions of Cytochrome c with Lipids
Langmuir 1998, 14, 6215-6219 6215 Electron-Transfer Properties of Cytochrome c Langmuir-Blodgett Films and Interactions of Cytochrome c with Lipids S. Boussaad, L. Dziri, R. Arechabaleta, N. J. Tao,*,
More informationInfluence of active sites organisation on calcium carbonate formation at model biomolecular interfaces
Applied Surface Science 246 (2005) 362 366 www.elsevier.com/locate/apsusc Influence of active sites organisation on calcium carbonate formation at model biomolecular interfaces S. Hacke a, *,D.Möbius b,
More information