Photo-destabilization of membranes

Size: px
Start display at page:

Download "Photo-destabilization of membranes"

Transcription

1 Photo-destabilization of membranes Stéphanie Bonneau 1, Daniel Brault 1, Julien Heuvingh 2, Christine Vever-Bizet 1, Frédéric Wieber 3 1 FRE 3207, 2 UMR 7636, 3 UMR 7117

2 Self assembled system Colloque «Origine des Planètes et de la Vie» 26 mai 2009 Lipidic unilamellar vesicles Model of biological membrane Water permeable, impermeable to solutes GUV: Volume fixed by osmolarity Surface area fixed by the number of lipids Optical contrast due to the difference of inner and external medium LUV (TEM) 5nm 5 à 20 µm GUV (PCM)

3 Self assembled system under influence Photo-sensitizer Chlorin- or porphyrin-type, polycyclic aromatic chondritic compounds Amphiphilic compounds Phospho-lipidic models Coll. H. Zepick (Department of Materials ETH Zürich) Light R-OH R-O Photo-chimical reactant P 3 P P - Radicals Stability of the membrane Probability of internalization Anoxic mechanisms 1 O 2 O 2 Singlet oxygen

4 1 st part Preliminary results: Membrane permeability and membrane geometry

5 mthpc Foscan Chlorine e6 TPCS2a Φ Three chlorin-macrocycles Ce6 TPCS 2a m-thpc 0,63 0,66 0,68 Ref.: H. Mojzisova & al. Photochem. Photobiol. 2009

6 Photo-induced peroxidation In solution Within the membrane Proportional to m-thpc >TPCS 2a >Ce6 Ref.: H. Mojzisova & al. Photochem. Photobiol. 2009

7 τ= 3ns 1 O 2 τ= 35 µs D~250nm Ref.: H. Mojzisova & al. Photochem. Photobiol. 2009

8 Photo-induced permeabilization TPCS 2a >Ce6>>m-THPC Ref.: H. Mojzisova & al. Photochem. Photobiol. 2009

9 1 O 2 1 O 2 1 O 2 1 O 2 1 O 2 1 O 2 Effect induced by charges? By the depth within the membrane? Perturbation of the membrane symmetry? Ref.: H. Mojzisova & al. Photochem. Photobiol. 2009

10 2 nd part Membrane asymmetry and permeability

11 Photo-inducing membrane asymmetry OOH Chlorin e6 Lipid Peroxide Cleaved-lipid Asymmetrical perturbation of the membrane: External leaflet Inner leaflet lavage / centrifugation

12 Chlorin (12µm) within the inner leaflet 10 µm Speed 7x

13 Shape transitions (Inner leaflet targeted) Prolate vesicle Pear shape 2 seconds / picture Budding 10 µm Pear shape Budding 1 second / picture Budding 10 µm

14 Chlorin (12µm) within the external leaflet 10 µm Speed 7x

15 Shape transitions (External leaflet targeted) 5 µm short time deformation Invagination permeabilization time (s) short time deformation deformation Invagination permeabilization time (s) 5 µm

16 Shape transitions and spontaneous curvature ADE Model Seifert 1997 Döbereiner 2000

17 Shape transitions and spontaneous curvature Effective spontaneous curvature: ext C 0 *= C 0 + απ h a 0 a 0 C>0 int Oxidation if the inner leaflet Negative curvature of the photo-sensitized leaflet C<0 ext int Oxidation of the external leaflet

18 Permeabilization of the membrane External leaflet : 100% vesicles permeabilized Inner leaflet : No permeabilized vesicles (except for C>120µM) Normalized contrast e - (t-t 0 ) τ τ(s) 60 5µM 25 µ M 125 µ M 125 µ M-inside time (s) 0 0,0 5,0 10,0 15,0 20,0 25,0 Diameter of the vesicule (µm)

19 Permeabilization of the membrane [Ce6] [Ce6] Ce6 outside Ce6 both (in/out) Ce6 inside Importance of the asymmetry in the permeabilization process

20 Permeabilization, curvature and tension Modification of the spontaneous curvature Area Volume Tension of the membrane Lysis of the GUV Hypothesis : the budding induces a tension of 0.15mN/m

21 Fusion 125µM out 10 µm Speed 7x

22 «Zoology» 5µM in 125µM out 10 µm 10 µm Speed 7x

23 Peroxidation and permeabilization DOPC DPPC DMPC (C14) Hypothesis : photo-degradation of the chlorin asymmetry

24 Photo-sensitizer Amphiphilic compound Coll. H. Zepick (Department of Materials ETH Zürich) Chlorin e6 R-OH R-O Photo-chemical reactant Light P 3 P P - Radicals

25

Kerdous R. 1, Mojzisova H. 1, Brault D. 1, Heuvingh J. 2, Bonneau S 1. FRE 3207 UPMC, 2 UMR 7636 ESPCI

Kerdous R. 1, Mojzisova H. 1, Brault D. 1, Heuvingh J. 2, Bonneau S 1. FRE 3207 UPMC, 2 UMR 7636 ESPCI Membrane Photo-permeabilization and Importance of the physico-chemical properties of photosensitizers used in PhotoChemical internalization of macromolecules (PCI) Kerdous R. 1, Mojzisova H. 1, Brault

More information

Interactions of Liquid Droplets with Biomembranes

Interactions of Liquid Droplets with Biomembranes Interactions of Liquid Droplets with Biomembranes Reinhard Lipowsky MPI of Colloids and Interfaces, Potsdam-Golm Intro: Membranes and GUVs GUVs + Aqueous Two-Phase Systems Theory of Fluid-Elastic Scaffolding

More information

Flip-Flop Induced Relaxation Of Bending Energy: Implications For Membrane Remodeling

Flip-Flop Induced Relaxation Of Bending Energy: Implications For Membrane Remodeling Biophysical Journal, Volume 97 Supporting Material Flip-Flop Induced Relaxation Of Bending Energy: Implications For Membrane Remodeling Raphael Jeremy Bruckner, Sheref S. Mansy, Alonso Ricardo, L. Mahadevan,

More information

Physical Cell Biology Lecture 10: membranes elasticity and geometry. Hydrophobicity as an entropic effect

Physical Cell Biology Lecture 10: membranes elasticity and geometry. Hydrophobicity as an entropic effect Physical Cell Biology Lecture 10: membranes elasticity and geometry Phillips: Chapter 5, Chapter 11 and Pollard Chapter 13 Hydrophobicity as an entropic effect 1 Self-Assembly of Lipid Structures Lipid

More information

Biological Membranes. Lipid Membranes. Bilayer Permeability. Common Features of Biological Membranes. A highly selective permeability barrier

Biological Membranes. Lipid Membranes. Bilayer Permeability. Common Features of Biological Membranes. A highly selective permeability barrier Biological Membranes Structure Function Composition Physicochemical properties Self-assembly Molecular models Lipid Membranes Receptors, detecting the signals from outside: Light Odorant Taste Chemicals

More information

Reversible photo-switching in a cell-sized vesicle

Reversible photo-switching in a cell-sized vesicle Reversible photo-switching in a cell-sized vesicle Tsutomu Hamada, Yuko T. Sato *, Takeshi Nagasaki, and Kenichi Yoshikawa* Department of Physics, Graduate School of Science, Kyoto University, Kyoto 606-850,

More information

Multiresponsive Behavior of Giant Vesicles

Multiresponsive Behavior of Giant Vesicles Multiresponsive Behavior of Giant Vesicles Reinhard Lipowsky MPI of Colloids and Interfaces, Potsdam-Golm Intro: Fluid Membranes and GUVs GUVs and Aqueous Two-Phase Systems Spontaneous Tubulation and Tension

More information

Kinetic Pathway of Antimicrobial Peptide Magainin 2-Induced Pore Formation in Lipid Membranes

Kinetic Pathway of Antimicrobial Peptide Magainin 2-Induced Pore Formation in Lipid Membranes ISSP International Workshop on Soft Matter Physics: Biomembranes and Vesicles on 24 Aug. 2010, at IPMU Lecture Hall Kinetic Pathway of Antimicrobial Peptide Magainin 2-Induced Pore Formation in Lipid Membranes

More information

Plasma membrane structure and dynamics explored via a combined AFM/FCS approach

Plasma membrane structure and dynamics explored via a combined AFM/FCS approach Plasma membrane structure and dynamics explored via a combined AFM/FCS approach Salvatore Chiantia Molekulare Biophysik, Dept. Of Biology Humboldt-Universität zu Berlin Dresden nanoseminar, May 2013 Outline

More information

RELEASE OF CONTENT THROUGH MECHANO- SENSITIVE GATES IN PRESSURISED LIPOSOMES. Martti Louhivuori University of Groningen

RELEASE OF CONTENT THROUGH MECHANO- SENSITIVE GATES IN PRESSURISED LIPOSOMES. Martti Louhivuori University of Groningen RELEASE OF CONTENT THROUGH MECHANO- SENSITIVE GATES IN PRESSURISED LIPOSOMES Martti Louhivuori University of Groningen www.cgmartini.nl MARTINI coarse-grained model water P4 butane Qo Na DPPC cholesterol

More information

Membrane lipid peroxidation by ultrasound: Mechanism and implications

Membrane lipid peroxidation by ultrasound: Mechanism and implications J. Biosci., Vol. 15, Number 3, September 1990, pp. 211 215. Printed in India. Membrane lipid peroxidation by ultrasound: Mechanism and implications A. K. JANA, S. AGARWAL and S. N. CHATTERJEE* Biophysics

More information

Phase Transition and dissipation driven budding in lipid vesicles

Phase Transition and dissipation driven budding in lipid vesicles Phase Transition and dissipation driven budding in lipid vesicles Thomas Franke, 1 Christian T. Leirer 1, Achim Wixforth 1, Nily Dan 2, Matthias F. Schneider 1,3* 1 University of Augsburg, Experimental

More information

Supplementary Figure 1. Overview of steps in the construction of photosynthetic protocellular systems

Supplementary Figure 1. Overview of steps in the construction of photosynthetic protocellular systems Supplementary Figure 1 Overview of steps in the construction of photosynthetic protocellular systems (a) The small unilamellar vesicles were made with phospholipids. (b) Three types of small proteoliposomes

More information

Biomembranes structure and function. B. Balen

Biomembranes structure and function. B. Balen Biomembranes structure and function B. Balen All cells are surrounded by membranes Selective barrier But also important for: 1. Compartmentalization 2. Biochemical activities 3. Transport of dissolved

More information

Maruša Vitek Advisor: doc. dr. Primož Ziherl

Maruša Vitek Advisor: doc. dr. Primož Ziherl Department of Physics Artificial Life: Vesicles and Synthesis of a Minimal Cell Seminar Maruša Vitek Advisor: doc. dr. Primož Ziherl 14 th December 2011 A goal of biochemical-based artificial life is to

More information

Giant Vesicles Exposed to Aqueous Two-Phase Systems: Membrane Wetting, Budding Processes, and Spontaneous Tubulation

Giant Vesicles Exposed to Aqueous Two-Phase Systems: Membrane Wetting, Budding Processes, and Spontaneous Tubulation Giant Vesicles Exposed to Aqueous Two-Phase Systems: Membrane Wetting, Budding Processes, and Spontaneous Tubulation Rumiana Dimova* and Reinhard Lipowsky* In this review, we describe recent studies of

More information

MAE 545: Lecture 14 (11/10) Mechanics of cell membranes

MAE 545: Lecture 14 (11/10) Mechanics of cell membranes MAE 545: ecture 14 (11/10) Mechanics of cell membranes Cell membranes Eukaryotic cells E. Coli FIBROBAST 10 mm E. COI nuclear pore complex 1 mm inner membrane plasma membrane secretory complex ribosome

More information

0.5 nm nm acyl tail region (hydrophobic) 1.5 nm. Hydrophobic repulsion organizes amphiphilic molecules: These scales are 5 10xk B T:

0.5 nm nm acyl tail region (hydrophobic) 1.5 nm. Hydrophobic repulsion organizes amphiphilic molecules: These scales are 5 10xk B T: Lecture 31: Biomembranes: The hydrophobic energy scale and membrane behavior 31.1 Reading for Lectures 30-32: PKT Chapter 11 (skip Ch. 10) Upshot of last lecture: Generic membrane lipid: Can be cylindrical

More information

OXIDATIVE STRESS STUDIES ON LIPID MODEL MEMBRANES

OXIDATIVE STRESS STUDIES ON LIPID MODEL MEMBRANES OXIDATIVE STRESS STUDIES ON LIPID MODEL MEMBRANES MARCELA ELISABETA BARBINTA-PATRASCU *, LAURA TUGULEA * * Faculty of Physics, University of Bucharest, Romania Received December 21, 2004 The liposomes

More information

NANO 243/CENG 207 Course Use Only

NANO 243/CENG 207 Course Use Only L9. Drug Permeation Through Biological Barriers May 3, 2018 Lipids Lipid Self-Assemblies 1. Lipid and Lipid Membrane Phospholipid: an amphiphilic molecule with a hydrophilic head and 1~2 hydrophobic tails.

More information

Lysosomes, Peroxisomes and Centrioles. Hüseyin Çağsın

Lysosomes, Peroxisomes and Centrioles. Hüseyin Çağsın Lysosomes, Peroxisomes and Centrioles Hüseyin Çağsın Lysosomes Outline Endosomes Molecule transport to the lysosomes Endocytosis Exocytosis Autophagy Vacuoles Peroxisomes Centrioles Lysosomes Lysosomes

More information

Coarse grained simulations of Lipid Bilayer Membranes

Coarse grained simulations of Lipid Bilayer Membranes Coarse grained simulations of Lipid Bilayer Membranes P. B. Sunil Kumar Department of Physics IIT Madras, Chennai 600036 sunil@iitm.ac.in Atomistic MD: time scales ~ 10 ns length scales ~100 nm 2 To study

More information

Critical Particle Sizes for the Engulfment of Nanoparticles by Membranes and Vesicles with Bilayer Asymmetry

Critical Particle Sizes for the Engulfment of Nanoparticles by Membranes and Vesicles with Bilayer Asymmetry This is an open access article published under an ACS AuthorChoice License, which permits copying and redistribution of the article or any adaptations for non-commercial purposes. Critical Particle Sizes

More information

arxiv: v1 [physics.bio-ph] 15 Mar 2018

arxiv: v1 [physics.bio-ph] 15 Mar 2018 ph Sensing by Lipids in Membranes: The Fundamentals of ph-driven Migration, Polarization and Deformations of Lipid Bilayer Assemblies Miglena I. Angelova a,b, Anne-Florence Bitbol c, Michel Seigneuret

More information

Topic 7b: Biological Membranes

Topic 7b: Biological Membranes Topic 7b: Biological Membranes Overview: Why does life need a compartment? Nature of the packaging what is it made of? properties? New types of deformations in 2D Applications: Stretching membranes, forming

More information

Paper 4. Biomolecules and their interactions Module 22: Aggregates of lipids: micelles, liposomes and their applications OBJECTIVE

Paper 4. Biomolecules and their interactions Module 22: Aggregates of lipids: micelles, liposomes and their applications OBJECTIVE Paper 4. Biomolecules and their interactions Module 22: Aggregates of lipids: micelles, liposomes and their applications OBJECTIVE The main aim of this module is to introduce the students to the types

More information

Shape transformation of giant phospholipid vesicles at high concentrations of C 12 E 8

Shape transformation of giant phospholipid vesicles at high concentrations of C 12 E 8 Bioelectrochemistry 63 (2004) 183 187 www.elsevier.com/locate/bioelechem Shape transformation of giant phospholipid vesicles at high concentrations of C 12 E 8 B. Mavčič, B. Babnik, A. Iglič*, M. Kandušer,

More information

membranes ISSN

membranes ISSN Membranes 2015, 5, 22-47; doi:10.3390/membranes5010022 Article OPEN ACCESS membranes ISSN 2077-0375 www.mdpi.com/journal/membranes Effects of Lipid Composition and Solution Conditions on the Mechanical

More information

Modern Aspects of Colloid Science MICELLES

Modern Aspects of Colloid Science MICELLES Modern Aspects of Colloid Science MICELLES critical micelle concentration (CMC) micellar shape determination of critical micelle concentration purity of surfactants Krafft temperature micellar equilibria

More information

5/12/2015. Cell Size. Relative Rate of Reaction

5/12/2015. Cell Size. Relative Rate of Reaction Cell Makeup Chapter 4 The Cell: The Fundamental Unit of Life We previously talked about the cell membrane The cytoplasm is everything inside the membrane, except the nucleus Includes Cytosol = liquid portion

More information

Parameter Optimization for FEM based modeling of singlet oxygen during PDT using COMSOL

Parameter Optimization for FEM based modeling of singlet oxygen during PDT using COMSOL Presented at the COMSOL Conference 21 Boston COMSOL Conference, Boston, 1/8/21 Parameter Optimization for FEM based modeling of singlet oxygen during PDT using COMSOL Xing Liang, Ken Kang-Hsin Wang, and

More information

Physics of Cellular Materials: Biomembranes

Physics of Cellular Materials: Biomembranes Physics of Cellular Materials: Biomembranes Tom Chou 1 1 Dept. of Biomathematics, UCL, Los ngeles, C 90095-1766 (Dated: December 6, 2002) Here I will review the mathematics and statistical physics associated

More information

The Cell and Cellular transport

The Cell and Cellular transport Cell theory (1838): The Cell 1. All organisms are composed of one or more cells, and the life processes of metabolism and heredity occur within these cells. 2. Cells are the smallest living things, the

More information

Single Giant Vesicle Rupture Events Reveal Multiple Mechanisms of Glass-Supported Bilayer Formation

Single Giant Vesicle Rupture Events Reveal Multiple Mechanisms of Glass-Supported Bilayer Formation 1988 Biophysical Journal Volume 92 March 2007 1988 1999 Single Giant Vesicle Rupture Events Reveal Multiple Mechanisms of Glass-Supported Bilayer Formation Chiho Hamai,* Paul S. Cremer, y and Siegfried

More information

Carbon-1 versus carbon-3 linkage of D-galactose to porphyrins: Synthesis, uptake, and photodynamic efficiency

Carbon-1 versus carbon-3 linkage of D-galactose to porphyrins: Synthesis, uptake, and photodynamic efficiency Supporting information for Carbon-1 versus carbon-3 linkage of D-galactose to porphyrins: Synthesis, uptake, and photodynamic efficiency Patrícia M. R. Pereira #, Waqar Rizvi #, N. V. S. Dinesh K. Bhupathiraju,

More information

Supplementary information. Membrane curvature enables N-Ras lipid anchor sorting to. liquid-ordered membrane phases

Supplementary information. Membrane curvature enables N-Ras lipid anchor sorting to. liquid-ordered membrane phases Supplementary information Membrane curvature enables N-Ras lipid anchor sorting to liquid-ordered membrane phases Jannik Bruun Larsen 1,2,3, Martin Borch Jensen 1,2,3,6, Vikram K. Bhatia 1,2,3,7, Søren

More information

Cholesterol modulates amyloid beta peptide 1-42 channel formation in planar lipid membranes

Cholesterol modulates amyloid beta peptide 1-42 channel formation in planar lipid membranes Cholesterol modulates amyloid beta peptide 1-42 channel formation in planar lipid membranes Meleleo D., Notarachille G., Gallucci E. and Micelli S. Dept. Farmaco-Biologico, Università degli Studi di Bari,

More information

Supplementary Information

Supplementary Information Supplementary Information Supplementary Figure 1. Fabrication processes of bud-mimicking PDMS patterns based on a combination of colloidal, soft, and photo-lithography a-d, The polystyrene (PS) particles

More information

Cell Membranes and Signaling

Cell Membranes and Signaling 5 Cell Membranes and Signaling Concept 5.1 Biological Membranes Have a Common Structure and Are Fluid A membrane s structure and functions are determined by its constituents: lipids, proteins, and carbohydrates.

More information

α Synuclein-Induced Membrane Remodeling Is Driven by Binding Affinity, Partition Depth, and Interleaflet Order Asymmetry

α Synuclein-Induced Membrane Remodeling Is Driven by Binding Affinity, Partition Depth, and Interleaflet Order Asymmetry This is an open access article published under an ACS AuthorChoice License, which permits copying and redistribution of the article or any adaptations for non-commercial purposes. pubs.acs.org/jacs α Synuclein-Induced

More information

Chapter 5 Ground Rules Of Metabolism

Chapter 5 Ground Rules Of Metabolism Chapter 5 Ground Rules Of Metabolism Energy and the World of Life Energy Capacity to do work Two Forms Of energy Kinetic Energy is the energy an object has because it is moving Potential Energy is the

More information

Endocytosis of Nanoparticles

Endocytosis of Nanoparticles Endocytosis of Nanoparticles Reinhard Lipowsky Theory & Bio-Systems, MPI-CI, Potsdam Motivation: Cellular Uptake of NPs Dissecting Endocytosis into Adhesion + Engulfment + Fission Quantitative Relationships

More information

Gel-assisted formation of giant unilamellar vesicles

Gel-assisted formation of giant unilamellar vesicles Gel-assisted formation of giant unilamellar vesicles Andreas Weinberger 1, Feng-Ching Tsai 2, Gijsje H. Koenderink 2, Thais F. Schmidt 3, Rosângela Itri 4, Wolfgang Meier 5, Tatiana Schmatko 1, André Schröder

More information

Neutron reflectivity in biology and medicine. Jayne Lawrence

Neutron reflectivity in biology and medicine. Jayne Lawrence Neutron reflectivity in biology and medicine Jayne Lawrence Why neutron reflectivity studies? build up a detailed picture of the structure of a surface in the z direction n e u tro n s in n e u tro n s

More information

Singlet Oxygen Modeling of BPD Mediated-PDT Using COMSOL

Singlet Oxygen Modeling of BPD Mediated-PDT Using COMSOL Singlet Oxygen Modeling of BPD Mediated-PDT Using COMSOL Timothy C. Zhu, Baochang Liu, Xing Liang COMSOL Boston, October -5, 01 Excerpt from the Proceedings of the 01 COMSOL Conference in Boston Outline

More information

Supporting Information

Supporting Information Supporting Information Li et al. 10.1073/pnas.1015892108 SI Text Statistics of the Membrane Tube Formation in Deflated Vesicles. In our experiments, membrane tube formation is a common phenomenon observed

More information

The main biological functions of the many varied types of lipids include: energy storage protection insulation regulation of physiological processes

The main biological functions of the many varied types of lipids include: energy storage protection insulation regulation of physiological processes Big Idea In the biological sciences, a dehydration synthesis (condensation reaction) is typically defined as a chemical reaction that involves the loss of water from the reacting molecules. This reaction

More information

Fall Name Student ID

Fall Name Student ID Name Student ID PART 1: Matching. Match the organelle to its function (11 points) 1.Proton motive force 2. Fluid Mosiac 3. Oxidative Phosphorylation 4. Pyruvate dehydrogenase 5. Electrochemical Force 6.

More information

Coarse-grained simulation studies of mesoscopic membrane phenomena

Coarse-grained simulation studies of mesoscopic membrane phenomena Coarse-grained simulation studies of mesoscopic membrane phenomena Markus Deserno Department of Physics Carnegie Mellon University with: Ira R. Cooke, Gregoria Illya, Benedict J. Reynwar, Vagelis A. Harmandaris,

More information

2R v. R v. R l c. Reminder: self assembly. Packing parameter (shape factor): v/a 0. spherical micelles : v/a 0 <1/3 <1/2

2R v. R v. R l c. Reminder: self assembly. Packing parameter (shape factor): v/a 0. spherical micelles : v/a 0 <1/3 <1/2 Reminder: self assembly a 0 Packing parameter (shape factor): v/a 0 l c spherical micelles : v/a 0 l c

More information

Lectures 16-17: Biological Membranes: Life in Two Dimensions

Lectures 16-17: Biological Membranes: Life in Two Dimensions Lectures 16-17: Biological Membranes: Life in Two Dimensions Lecturer: Brigita Urbanc Office: 1-909 (E-mail: brigita@drexel.edu) Course website: www.physics.drexel.edu/~brigita/courses/biophys_011-01/

More information

Penetration Depth of 635 nm Laser Light Into the Biological Tissue

Penetration Depth of 635 nm Laser Light Into the Biological Tissue 2017 Published in 5th International Symposium on Innovative Technologies in Engineering and Science 29-30 September 2017 (ISITES2017 Baku - Azerbaijan) Penetration Depth of 635 nm Laser Light Into the

More information

Lecture Readings. Vesicular Trafficking, Secretory Pathway, HIV Assembly and Exit from Cell

Lecture Readings. Vesicular Trafficking, Secretory Pathway, HIV Assembly and Exit from Cell October 26, 2006 1 Vesicular Trafficking, Secretory Pathway, HIV Assembly and Exit from Cell 1. Secretory pathway a. Formation of coated vesicles b. SNAREs and vesicle targeting 2. Membrane fusion a. SNAREs

More information

The Fusion of Membranes and Vesicles: Pathway and Energy Barriers from Dissipative Particle Dynamics

The Fusion of Membranes and Vesicles: Pathway and Energy Barriers from Dissipative Particle Dynamics The Fusion of Membranes and Vesicles: Pathway and Energy Barriers from Dissipative Particle Dynamics Andrea Grafmüller 1 Theory and Bio-Systems, Max Planck Institute for Colloids and Interfaces, Potsdam,

More information

Photochemical Applications to the Study of Complexity Phospholipid Bilayer Environments

Photochemical Applications to the Study of Complexity Phospholipid Bilayer Environments Virginia Commonwealth University VCU Scholars Compass Theses and Dissertations Graduate School 2006 Photochemical Applications to the Study of Complexity Phospholipid Bilayer Environments Christopher John

More information

Possible Molecular Mechanism to Account for Wavelength Dependence of Equilibration Rates of Patman and Laurdan in Phosphatidylcholine Bilayers

Possible Molecular Mechanism to Account for Wavelength Dependence of Equilibration Rates of Patman and Laurdan in Phosphatidylcholine Bilayers Brigham Young University BYU ScholarsArchive All Theses and Dissertations 2011-05-12 Possible Molecular Mechanism to Account for Wavelength Dependence of Equilibration Rates of Patman and Laurdan in Phosphatidylcholine

More information

Medcelična signalizacija -

Medcelična signalizacija - Medcelična signalizacija - - prenos živčnega signala Lodish, H. et al.: Nerve cells. In: Molecular cell biology, W.H. Freeman & Co., New York. Alberts, B. et al.: Membrane transport of small molecules

More information

Supplementary Information Membrane tension increases fusion efficiency of model membranes in the presence of SNAREs

Supplementary Information Membrane tension increases fusion efficiency of model membranes in the presence of SNAREs Supplementary Information Membrane tension increases fusion efficiency of model membranes in the presence of SNAREs Torben-Tobias Kliesch, Jörn Dietz, Laura Turco, Partho Halder, Elena Alexandra Polo,

More information

CHAPTER 11 Membranes

CHAPTER 11 Membranes CHAPTER 11 Membranes Key topics The function of biological membranes The structure and composition of membranes Dynamics of membranes Structure and function of membrane proteins Transport across biological

More information

On Shape Transformations and Shape Fluctuations of Cellular Compartments and Vesicles

On Shape Transformations and Shape Fluctuations of Cellular Compartments and Vesicles Physica Scripta. Vol. T49, 111-118, 1993 On Shape Transformations and Shape Fluctuations of Cellular Compartments and Vesicles E. Sackmann, J. Kas and J. Radler Physik Department (Biophysics Group), Technische

More information

Supplementary Materials for

Supplementary Materials for advances.sciencemag.org/cgi/content/full/2/12/e1601838/dc1 Supplementary Materials for General and programmable synthesis of hybrid liposome/metal nanoparticles Jin-Ho Lee, Yonghee Shin, Wooju Lee, Keumrai

More information

Lipids: Membranes Testing Fluid Mosaic Model of Membrane Structure: Cellular Fusion

Lipids: Membranes Testing Fluid Mosaic Model of Membrane Structure: Cellular Fusion Models for Membrane Structure NEW MODEL (1972) Fluid Mosaic Model proposed by Singer & Nicholson Lipids form a viscous, twodimensional solvent into which proteins are inserted and integrated more or less

More information

Moore s law in information technology. exponential growth!

Moore s law in information technology. exponential growth! Moore s law in information technology exponential growth! ... and how it compares to developments in bio sciences Biology is driven by an avalanche of new information... DNA sequencing methods and throughput

More information

Soft Matter REVIEW. Phase transitions in supported lipid bilayers studied by AFM. 1. Introduction. Andrea Alessandrini* ab and Paolo Facci* c

Soft Matter REVIEW. Phase transitions in supported lipid bilayers studied by AFM. 1. Introduction. Andrea Alessandrini* ab and Paolo Facci* c REVIEW Cite this:, 2014,10, 7145 Phase transitions in supported lipid bilayers studied by AFM Andrea Alessandrini* ab and Paolo Facci* c View Article Online View Journal View Issue Received 20th May 2014

More information

Membrane Structure and Membrane Transport of Small Molecules. Assist. Prof. Pinar Tulay Faculty of Medicine

Membrane Structure and Membrane Transport of Small Molecules. Assist. Prof. Pinar Tulay Faculty of Medicine Membrane Structure and Membrane Transport of Small Molecules Assist. Prof. Pinar Tulay Faculty of Medicine Introduction Cell membranes define compartments of different compositions. Membranes are composed

More information

Morphology of Vesicles

Morphology of Vesicles CHAPTER 8 Morphology of Vesicles U. SEIFERT Institut für Festkörperforschung, Forschungszentrum Jülich, 52425 Jülich, Germany R. LIPOWSKY Max-Plank-Institut für Kolloid- und Grenzflächenforschung, Kantstr.

More information

Chemical Surface Transformation 1

Chemical Surface Transformation 1 Chemical Surface Transformation 1 Chemical reactions at Si H surfaces (inorganic and organic) can generate very thin films (sub nm thickness up to µm): inorganic layer formation by: thermal conversion:

More information

How Cells Work. Chapter 4

How Cells Work. Chapter 4 How Cells Work Chapter 4 Energy Laws Energy is the capacity to do work The total amount of energy in the universe is constant-energy can t be created or destroyed..only transferred! Energy is flowing from

More information

Bottom%Up(Synthetic(Biology:( Double(Emulsion(and(the(

Bottom%Up(Synthetic(Biology:( Double(Emulsion(and(the( Bottom%Up(Synthetic(Biology:( Double(Emulsion(and(the( Artificial(Cell( Christopher W. Coyne a a University of Michigan, Department of Mechanical Engineering Abstract Bottom-up synthetic biology embodies

More information

A low magnification SEM image of the fabricated 2 2 ZnO based triode array is

A low magnification SEM image of the fabricated 2 2 ZnO based triode array is Chapter 6 Characteristics of Field Emission Triode 6.1 Planar Gated Field Emission Triode 6.1.1 Structural and Electrical Analysis A low magnification SEM image of the fabricated 2 2 ZnO based triode array

More information

Wetting-Induced Budding of Vesicles in Contact with Several Aqueous Phases

Wetting-Induced Budding of Vesicles in Contact with Several Aqueous Phases pubs.acs.org/jpcb Wetting-Induced Budding of Vesicles in Contact with Several Aqueous Phases Yanhong Li, Halim Kusumaatmaja, Reinhard Lipowsky, and Rumiana Dimova* Max Planck Institute of Colloids and

More information

Cellular Transport Notes

Cellular Transport Notes Cellular Transport Notes About Cell Membranes All cells have a cell membrane Functions: a. Controls what enters and exits the cell to maintain an internal balance called homeostasis b. Provides protection

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION High-speed atomic force microscopy shows that annexin V stabilizes membranes on the second timescale Atsushi Miyagi, Chris Chipot, Martina Rangl & Simon Scheuring Supplementary Movies: Supplementary Movie

More information

Fluorescence Lifetime Techniques for Label Free Intraoperative Delineation of Tumor-Resection Margins

Fluorescence Lifetime Techniques for Label Free Intraoperative Delineation of Tumor-Resection Margins Fluorescence Lifetime Techniques for Label Free Intraoperative Delineation of Tumor-Resection Margins Laura Marcu, PhD Professor of Biomedical Engineering and Neurological Surgery University of California

More information

Membrane interactions of lipopeptides and saponins, two groups of natural amphiphiles

Membrane interactions of lipopeptides and saponins, two groups of natural amphiphiles Membrane interactions of lipopeptides and saponins, two groups of natural amphiphiles J. Lorent (public defence) Main supervisor : M-P. Mingeot-Leclercq (FACM) Co-supervisor : J. Quetin-Leclercq (GNS)

More information

Self-Assembly. Lecture 3 Lecture 3 Surfactants Self-Assembly

Self-Assembly. Lecture 3 Lecture 3 Surfactants Self-Assembly Self-Assembly Lecture 3 Lecture 3 Surfactants Self-Assembly Anionic surfactants unsaturated omega-3 3 fatty acids rd carbon from the metyl end has double bond saturated Non-ionic surfactants Cationic surfactants

More information

Virus Structure. Characteristics of capsids. Virus envelopes. Virion assembly John Wiley & Sons, Inc. All rights reserved.

Virus Structure. Characteristics of capsids. Virus envelopes. Virion assembly John Wiley & Sons, Inc. All rights reserved. Virus Structure Characteristics of capsids Virus envelopes Virion assembly Capsids package viral genomes and transmit them to a new host cell Capsid rigid, symmetrical container composed of viral protein

More information

BIOL*1090 Introduction To Molecular and Cellular Biology Fall 2014

BIOL*1090 Introduction To Molecular and Cellular Biology Fall 2014 Last time... BIOL*1090 Introduction To Molecular and Cellular Biology Fall 2014 Lecture 3 - Sept. 15, 2014 Viruses Biological Membranes Karp 7th ed: Chpt. 4; sections 4-1, 4-3 to 4-7 1 2 VIRUS Non-cellular

More information

Giant vesicles formed by gentle hydration and electroformation: A comparison by fluorescence microscopy

Giant vesicles formed by gentle hydration and electroformation: A comparison by fluorescence microscopy Colloids and Surfaces B: Biointerfaces 42 (2005) 125 130 Giant vesicles formed by gentle hydration and electroformation: A comparison by fluorescence microscopy Nicolas Rodriguez a,frédéric Pincet b, Sophie

More information

ORGANIZATION OF ANTIBIOTIC AMPHOTERICIN B IN MODEL LIPID MEMBRANES. A MINI REVIEW

ORGANIZATION OF ANTIBIOTIC AMPHOTERICIN B IN MODEL LIPID MEMBRANES. A MINI REVIEW CELLULAR & MOLECULAR BIOLOGY LETTERS Volume 8, (2003) pp 161 170 http://www.cmbl.org.pl Received 30 September 2002 Accepted 13 February 2003 ORGANIZATION OF ANTIBIOTIC AMPHOTERICIN B IN MODEL LIPID MEMBRANES.

More information

Protection of DPPC phospholipid liposomal membrane against radiation oxidative damage by antioxidants

Protection of DPPC phospholipid liposomal membrane against radiation oxidative damage by antioxidants Protection of DPPC phospholipid liposomal membrane against radiation oxidative damage by antioxidants D. L. Marathe, B. N. Pandey and K. P. Mishra Radiation Biology Division, Bhabha Atomic Research Centre,

More information

Evolution of the Hemifused Intermediate on the Pathway to Membrane Fusion

Evolution of the Hemifused Intermediate on the Pathway to Membrane Fusion Biophysical Journal Volume 13 August 212 689 71 689 Evolution of the Hemifused Intermediate on the Pathway to Membrane Fusion Jason M. Warner and Ben O Shaughnessy* Department of Chemical Engineering,

More information

Photophysics of Aromatic Molecules

Photophysics of Aromatic Molecules Photophysics of Aromatic Molecules John B. Birks Reader in Physics, University of Manchester WILEY - INTERSCIENCE a division of John Wiley & Sons Ltd London New York Sydney Toronto itffiskfti' i 1. Excited

More information

The Cell Organelles. Eukaryotic cell. The plasma membrane separates the cell from the environment. Plasma membrane: a cell s boundary

The Cell Organelles. Eukaryotic cell. The plasma membrane separates the cell from the environment. Plasma membrane: a cell s boundary Eukaryotic cell The Cell Organelles Enclosed by plasma membrane Subdivided into membrane bound compartments - organelles One of the organelles is membrane bound nucleus Cytoplasm contains supporting matrix

More information

Cell Structure and Function. Biology 12 Unit 1 Cell Structure and Function Inquiry into Life pages and 68-69

Cell Structure and Function. Biology 12 Unit 1 Cell Structure and Function Inquiry into Life pages and 68-69 Cell Structure and Function Biology 12 Unit 1 Cell Structure and Function Inquiry into Life pages 45 59 and 68-69 Assignments for this Unit Pick up the notes/worksheet for this unit and the project There

More information

Artificial cells and microcompartmentation

Artificial cells and microcompartmentation Artificial cells and microcompartmentation IRTG Lecture on Microcompartments, Membranes and Cellular Communication - part II: Methods H. Merzendorfer, 25.7.2012 The basic unit of life: The cell Cells observed

More information

We parameterized a coarse-grained fullerene consistent with the MARTINI coarse-grained force field

We parameterized a coarse-grained fullerene consistent with the MARTINI coarse-grained force field Parameterization of the fullerene coarse-grained model We parameterized a coarse-grained fullerene consistent with the MARTINI coarse-grained force field for lipids 1 and proteins 2. In the MARTINI force

More information

Single GUV Method Reveals Interaction of Tea Catechin (2)-Epigallocatechin Gallate with Lipid Membranes

Single GUV Method Reveals Interaction of Tea Catechin (2)-Epigallocatechin Gallate with Lipid Membranes 3178 Biophysical Journal Volume 92 May 2007 3178 3194 Single GUV Method Reveals Interaction of Tea Catechin (2)-Epigallocatechin Gallate with Lipid Membranes Yukihiro Tamba,* Shinya Ohba, y Masayo Kubota,

More information

Chapter 12. Part II. Biological Membrane

Chapter 12. Part II. Biological Membrane Chapter 12 Part II. Biological Membrane Single-tailed lipids tend to form micelles Critical micelle concentration (cmc): minimum concentration that forms micelles e.g.) cmc for SDS 1mM; cmc for phospholipids

More information

CHAPTER 4. Tryptophan fluorescence quenching by brominated lipids

CHAPTER 4. Tryptophan fluorescence quenching by brominated lipids CHAPTER 4 Tryptophan fluorescence quenching by brominated lipids 102 4.1 INTRODUCTION The structure and dynamics of biological macromolecules have been widely studied with fluorescence quenching. The accessibility

More information

Protein directed assembly of lipids

Protein directed assembly of lipids Protein directed assembly of lipids D. Nordin, O. Yarkoni, L. Donlon, N. Savinykh, and D.J. Frankel SUPPLEMENTARY MATERIAL Materials and Methods Supported bilayer preparation 1,2-dioleoyl-sn-glycero-3-phosphocholine

More information

Supporting information

Supporting information Electronic Supplementary Material (ESI) for Nanoscale. This journal is The Royal Society of Chemistry 2014 Supporting information Seeing the Diabetes: Visual Detection of Glucose Based on the Intrinsic

More information

Control of Membrane Fusion Mechanism by Lipid Composition: Predictions from Ensemble Molecular Dynamics

Control of Membrane Fusion Mechanism by Lipid Composition: Predictions from Ensemble Molecular Dynamics Control of Membrane Fusion Mechanism by Lipid Composition: Predictions from Ensemble Molecular Dynamics Peter M. Kasson *, Vijay S. Pande * Department of Chemistry, Stanford University, Stanford, California,

More information

Neutron and Softmatter

Neutron and Softmatter Neutron and Softmatter Hideki Seto IMSS/J-PARC Center, KEK SOKENDAI So# Ma'er Polymer Liquid Crystal polymeric liquid crystal liquid crystal polymer amphiphilic polymer lyotropic liquid crystal liquid

More information

Peroxisomes. Endomembrane System. Vacuoles 9/25/15

Peroxisomes. Endomembrane System. Vacuoles 9/25/15 Contains enzymes in a membranous sac that produce H 2 O 2 Help survive environmental toxins including alcohol Help the cell use oxygen to break down fatty acids Peroxisomes Endo System Components of the

More information

Cell membrane & Transport. Dr. Ali Ebneshahidi Ebneshahidi

Cell membrane & Transport. Dr. Ali Ebneshahidi Ebneshahidi Cell membrane & Transport Dr. Ali Ebneshahidi Cell Membrane To enclose organelles and other contents in cytoplasm. To protect the cell. To allow substances into and out of the cell. To have metabolic reactions

More information

Lectures 18: Biological Membranes: Life in Two Dimensions (contd.)

Lectures 18: Biological Membranes: Life in Two Dimensions (contd.) Lectures 18: Biological Membranes: Life in Two Dimensions (contd.) Lecturer: Brigita Urbanc Office: 1-909 (E-mail: brigita@drexel.edu) Course website: www.physics.drexel.edu/~brigita/courses/biophys_011-01/

More information

LIVING SYSTEMS APPEAR COMPLEX BUT THERE IS AN UNDERLYING SIMPLICITY AND ELEGANCE:

LIVING SYSTEMS APPEAR COMPLEX BUT THERE IS AN UNDERLYING SIMPLICITY AND ELEGANCE: CHM333 LECTURE 1: 8/26/09 FALL 2009 Professor Christine Hrycyna What is Biochemistry? Simplest definition: Chemistry of the living cell Uses basic laws of chemistry, biology and physics to explain processes

More information

Asymmetrical Membranes and Surface Tension

Asymmetrical Membranes and Surface Tension Biophysical Journal Volume 83 September 2002 1443 1454 1443 Asymmetrical Membranes and Surface Tension Mounir Traïkia,* Dror E. Warschawski,* Olivier Lambert, Jean-Louis Rigaud, and Philippe F. Devaux*

More information