RET genetic screening in patients with medullary thyroid cancer: The Moroccan experience

Size: px
Start display at page:

Download "RET genetic screening in patients with medullary thyroid cancer: The Moroccan experience"

Transcription

1 Original Article Free full text available from RET genetic screening in patients with medullary thyroid cancer: The Moroccan experience ABSTRACT Background: Germline RET gene mutations are well known to be the genetic causes of multiple endocrine neoplasia type 2 (MEN2) and may be identified by genetic screening. Aim: The purpose of the present study was to screen nine MTC patients for RET sequence changes. Materials and Methods: In this study, our sample was composed of 30 individuals: 9 index patients with medullary thyroid carcinoma (MTC) corresponding either to 3 subjects with clinical evidence of MEN2, 6 with apparently sporadic MTC (smtc), and 21 relatives have been investigated for RET mutations. After DNA extraction from peripheral blood leukocytes, RET exons 8, 10, 11, and exon/intron boundaries were analyzed by direct PCR sequencing. Results: Three different known RET germline mutations in exon 11 (codon 634), p.cys634arg (c1900 T C) (de novo case), p.cys634phe (c1901 G T), p.cys634trp (c1902 C G), were detected in three individuals with MEN2 phenotype. Of the 21 relatives, 2 cases presented mutation. Among the six probands with smtc, none was found to carry mutation. There was no difference between RET polymorphisms detected among both MEN2 and smtc patients. Conclusions: These preliminary data suggest that the RET mutation spectra observed in Moroccan patients with MEN2 are similar to those previously reported in other countries. KEY WORDS: Calcitonin, MTC, RET, MEN2A, polymorphism INTRODUCTION Medullary thyroid carcinoma (MTC) originates from para-follicular C cells and can be sporadic (75%) or hereditary (25%). [1] The familial form is an autosomal dominant inherited disease characterized by the presence of MTC and other endocrine tumors such as pheochromocytoma (PCC) and/or parathyroid adenoma (HPT) in multiple endocrine neoplasia type 2A (MEN2A), and PCC, ganglioneuromatosis, mucosal neuromas and/or skeletal abnormalities in MEN2B. Familial MTC (FMTC) is characterized by the familial occurrence of MTC without other lesions. [1,2] Moreover, a MEN2 family with less than four members with only MTC and screened negative for PCC and HPT is referred to as unclassified or other according to the International RET Mutation Consortium criteria. [3,4] still is a matter of debate to which extent neutral sequence variants (polymorphisms) could have interacting, predisposing or modifying roles in the pathogenesis of MEN2 or sporadic MTC. [5,6] Biochemical screening for early MEN2 in atrisk individuals is performed by testing basal and stimulated serum calcitonin (CT) concentration. [7,8] Recently, presymptomatic identification of RET mutation carriers has had a great impact on the diagnosis and the management of MEN2 disease at an early stage. [8,9] The aim of this study was to identify RET hotspot germline mutations and polymorphisms in MTC patients and their relatives. MATERIALS AND METHODS Ainahi Abdelhakim 1, Barlier Anne 2, Kebbou Mohamed 4, Benabdeljalil Nadia 1, Timinouni Mohammed 3, Fechtali Taoufiq 5, Roche Catherine 2, El Antri Said 6 5 Laboratoire de Physiologie et Ecophysiologie, 6 Laboratoire de Biochimie, Environnement & Agroalimentaire, FST, Université Hassan II- Mohammedia, Morocco, 2 Laboratoire de Biochimie et Biologie Moléculaire, Assistance Publique des Hôpitaux de Marseille, France, 4 Service de Médecine Nucléaire, Centre Hospitalier Universitaire Ibn Rochd, Faculté de Médecine et de Pharmacie, Université Hassan II, Morocco, 1 Laboratoire d Hormonologie et Marqueurs tumoraux, Morocco, 3 Laboratoire de Microbiologie et Biologie Moléculaire, Institut Pasteur du Maroc, Morocco For correspondence: Dr. Ainahi Abdelhakim, Institut Pasteur du Maroc, 1 Louis Pasteur, Casablanca, Morocco. abdelhakim.ainahi@ pasteur.ma DOI: / PMID: ***** Germline RET hotspot activating mutations affecting exons 8, 10, 11, 13, 14, 15, and 16 have been found to be associated with MEN2 and FMTC. [2-4] On the other hand, several RET single-nucleotide polymorphisms (SNPs) have been described in MTC patients as well as in the general population. [5,6] It Patients and their family members The classification of patients was done based on clinical results according to the International RET Mutation Consortium definitions. [3,4] The population study was composed of 30 subjects, 9 index patients (2 MEN2A, 1 unclassified, and J Cancer Res Ther - July-September Volume 5 - Issue 3

2 suspected smtc), and 21 relatives. Median age at diagnosis was 20 years (MEN2) and 38 years (smtc). All nine probands were clinically affected by MTC and were subjected to thyroidectomy. The anatomopathological analysis confirmed the MTC diagnosis. One patient died of the disease. Endocrinological testing Basal plasma CT concentrations were measured with a commercially available two-site immunometric assay (ElsahCT, Cis-BioInternational, Gif sur Yvette, France). A basal CT value up to 10 pg/ml was considered normal according to the data of the French Calcitonin Tumors Study Group. All probands were screened for the presence of PCC by HPLC catecholamine urinary level measurement methods (Chromosystems, München, Germany). HPT screening was performed by measuring serum calcium (Vetros 250, Johnson and Johnson, USA) and parathyroid hormone levels (Elsa-PTH, Cis-BioInternational, Gif sur Yvette, France). RET mutation analysis After signed informed consent, genomic DNA was isolated from whole-blood samples and was frozen until testing in the Laboratory of Biochemstry and Molecular Biology at the Hospital Conception (Marseille, France). RET hotspots (exons 8, 10, 11, 13 16) were amplified using flanking regions primer setting [Table 1], universal primer M13F (5 -TGT AAA ACG ACG GCC AGT-3 ), and M13R (5 -CAG GAA ACA GCT ATG ACC- 3 ) according to the manufacturer s protocol. [10] The genomic DNA was amplified using the Touchdown (TD) PCR assay [11] and HotStarTaq PCR kit (Qiagen, Courtaboeuf, France) in a final volume of 50 µl containing PCR buffer 1 x contains 1.5 Mm MgCl 2, Q-Solution 1 x, 200 µm dntps, 2.5 U of HotStarTaq DNA polymerase and 0.5 µm of each primer. In a thermal cycler (The Applied Biosystems 2720 Thermal Cycler), TD amplification was performed with an initial step of 95 C for 15 min, followed by 3 cycles of 95 C for 30 s, annealing temperatures starting at 66 C for 45 s (decreasing by 2 C/cycle), and 72 C for 1 min for extension. This step was followed by 26 cycles of 95 C for 30 s, 56 C for 45 s, 72 C for 1 min, and a final extension at 72 C for 10 min. The amplified DNA was analyzed on 2% agarose Tris-borate EDTA gel electrophoresis and purified using minispin columns (Millipore, Moslheim, France). Direct sequencing of the seven exons was carried out using Dye Terminator Cycle Sequencing Quick Start Kit (Beckman Coulter, CA, USA) on Ceq 8000 sequencer (Beckman Coulter) automated sequencer according to the manufacturer s instructions. RESULTS We examined 9 index cases suffering from MTC (mean age, 37.8 ± 15.8 years) and 21 relatives, totalizing 30 individuals. As shown in Table 2, MEN2 phenotype was restricted to mutations in exon 11 at codon 634 but there were different amino acid substitutions (replacements of cysteine with arginine, tyrosine, Table 1: Sequences of oligonucleotide primers used for PCR amplification of exons 8, 10, 11, 13, 14, 15, and 16 of the RET Exon Primer Sequence (5 3 ) Product size Sequencing primers (bp) 8 M13-RET-8F CAG GCC AGC CCC CTG TGA C 325 M13F or M13R M13-RET-8R TGA GGT GCC AGA AGC AGA CC 10 M13-RET-10F GGA GGC TGA GTG GGC TAC G 225 M13F or M13R M13-RET-10R CTG GGA GGT GGT GGT GGT C 11 M13-RET-11F CCT CTG GCG GTG CCA AGC CTC 454 M13F or M13R M13-RET-11R CCT CGT CTG CCC AGC GTT 13 M13-RET-13F CTC TCT GTC TGA ACT TGG GC 323 M13F or M13R M13-RET-13R AGA ACA GGG CTG TAT GGA GC 14 M13-RET-14F GAA GAC CCA AGC TGC CTG AC 327 M13F or M13R M13-RET-14R GTG CAG AGC CAT ATG CAC GC 15 M13-RET-15F TCT CAC AGG GGA TGC AGT ATC TG 692 M13F or 15R RET-15R GAG GCT GAG CGG AGT TCT AAT TG 16 RET-16F M13-RET-16R CAG CAT CTC AGC AAT CCA CAG G TCT GTA ACC TCC ACC CCA AG 328 M13R or 16F Table 2: Clinical characteristics and genetic findings of the index patients Patient Sex Age at diagnosis (year) CT (ng/ml) N< 10 HPT PCC Mutation Phenotypic expression RET exonic SNPs 1 M NA 1,500 NA NA No smtc No 2 F No No No smtc No 3 F No No No smtc No 4 F No No p.cys634phe UnclassiÞ ed G691S HP 5 F No Yes p.cys634arg MEN2A G691S/S904S HP 6 F No No No smtc G691S HP 7 F 23 1,450 No Yes p.cys634trp MEN2A No 8 M No No No smtc L769L 9 F 49 1,440 No No No smtc No M, male; F, female; CT, calcitonin; PCC, pheochromocytoma; HPT, hyperparathyroidism; SNPs, single-nucleotide polymorphisms; HP, heterozygous state; smtc, sporadic medullary thyroid carcinoma; MEN2A, multiple endocrine neoplasia type 2A; NA, not available. J Cancer Res Ther - July-September Volume 5 - Issue 3 199

3 or tryptophan). However, RET germline mutation screening was negative in all suspected smtc patients. Furthermore, RET hotspot sequencing revealed polymorphic variants at codon 691 (exon 11), 769 (exon 13), and 904 (exon 15) both in smtc and MEN2 groups. The first MEN2A phenotype family was already described in a previous report. [12] The index patient (Patient 5 [Table 2]) was a 18-year-old female. The relatively young age of PCC and MTC presentation suggested a potential syndrome and the following evaluation showed the presence of the germline mutation p.cys634arg (c1900 T C), while the genetic screening of the remaining family members (the parents, three sisters, and one brother) was found negative suggesting a de novo index case. In the unclassified phenotype family, the index patient (Patient 4 [Table 2]), a 24-year-old girl, harbored the germline mutation p.cys634phe (c1901 G T) [II-1, Figure 1]. During the genetic screening, the proband s sister was identified as a gene carrier at an age of 21 years. The former was clinically affected [II-2, Figure 1] and showed increased basal CT (2025 pg/ml). She underwent total thyroidectomy. Pathology analysis was consistent with MTC. The remaining family members (the mother, one sister, and one brother) were negative for the mutation. However, the family history revealed that the proband s father died due to metastatic disease many years prior to genetic testing. Until now, none of the two gene carriers from this family have had biochemical evidence of PCC or HPT. In the second MEN2A phenotype family, the index patient (Patient 7 [Table 2]) was a 30-year-old woman. She was asymptomatic until the age of 25 years when a nodule in the right lobe of the thyroid gland was discovered. Total thyroidectomy was performed and the histological report showed the presence of MTC. At the time of diagnosis, PCC was also detected but no evidence of HPT was found. By DNA sequencing, the germline mutation p.cys634trp (c1902 C G) [II-1, Figure 2] was detected in this index case. Genetic screening of the family identified one positive carrier (the proband s daughter). The clinically asymptomatic daughter, 11-year-old [III-1, Figure 2], was a gene carrier with a moderately high basal CT level (13.88 pg/ml) and no biochemical evidence of PCC or HPT at this time. Based on those results, she was submitted to prophylactic thyroidectomy. Figure 1: Pedigree of the unclassified phenotype family. positive for MTC and positive for RET screening mutation; negative for MTC and negative for RET screening mutation; deceased individual Figure 2: Pedigree of the second MEN2A phenotype family. positive for MTC and positive for RET screening mutation; negative for MTC and negative for RET screening mutation; deceased individual; individual not tested. 200 J Cancer Res Ther - July-September Volume 5 - Issue 3

4 DISCUSSION Over the last 10 years, different RET mutations have been well characterized, especially after the introduction of RET genetic screening in the workup of all patients with MTC, of both hereditary and apparently sporadic type. [3,4] Moreover, there are numerous new indices indicating a link between the known RET mutations from those classically associated with MTC to the ones associated with MEN2A or the opposite, showing a great variability of the mutational spectrum and the possible modulatory effect of the SNPs on the clinical expression. [13] Recently, genetic diagnosis for MEN2 disease has been available in Morocco. [12,14] However, this is the first comprehensive report of RET mutation and polymorphism screening in a Moroccan population. In this research, we detected RET germline mutations with a high sensitivity analyzing exons 8, 10, 11, and Mutations were identified in three (33%) cases; these results are in line with the data stating that up to 25% of MTC cases reported in several MTC families worldwide. This result confirms that RET mutations are highly conserved despite ethnical variations and environmental factors. [15-17] Our results correlate with the findings of the International RET Mutation Consortium showing that the most frequent mutations were found in exon 11 at codon 634. [16,17 ] According to different series, the presence of a specific mutation at codon 634 has been associated with PCC and/or HPT; we observed this association in only two MEN2A cases. [16,17] However, the small number of our samples does not allow us to draw conclusions on phenotype/genotype correlations. The p.cys634phe mutation, which is usually described in the literature as the cause of MEN2A, [3,4] was found in the unclassified case. This fact could be explained either by the misclassification of MEN2A with low penetrance of PCC or by the possible influence of RET polymorphisms or by other modifier genes that protect this case from the development of PCC. [18-20] In this report, the early detection of mutation carrier was successful in two cases subjected to prophylactic thyroidectomy. Thus, genetic screening provided an important decision-making tool to guide clinical treatment in those cases. The decision to perform thyroidectomy on these young, at-risk carriers was due to the presence of RET 634 germline mutation and family history as well. Our results can be considered a good example of the clinical impact of early RET screening mutations on asymptomatic MTC carriers. [21] On the other hand, several authors suggest that a routine application of RET testing should be included in all cases of apparent smtc because individuals could have germline mutation in the peripheral blood DNA, commonly associated with hereditary MTC. [21-23] In our samples, none of the six cases with smtc revealed mutation, thus discarding inheritable disease. Mutations in other domains of RET or molecular J Cancer Res Ther - July-September Volume 5 - Issue 3 alterations in other genes might be involved in the genesis of smtc. [18,19] It is also useful to mention that there was a difference in the mean age at diagnosis of the MTC between the sporadic and inherited groups of the family: 38 years (clinically sporadic cases) versus 20 years (clinically MEN2 cases). The inherited MTC form was associated with a better outcome due to the young age at the time of diagnosis. A similar association between poor prognosis and sporadic MTC has been found by other authors. [22,23,24] The identification of RET mutations, responsible for MEN2 syndrome, gives us the opportunity to find mutation carriers among at-risk family members and simplifies the management of kindred having this disease. Taking into considering the very small number of our observations, we have showed that the genetic characteristics of MTC among Moroccan patients with inherited or sporadic MTC are similar to those already described in several MTC families worldwide. ACKNOWLEDGMENTS We thank Ms Germanetti Anne Laure and Dr. Sylvie Monique for their valuable technical assistance. This work was supported in part by the Oncogenetic Network from French Ministry, the assistance Publique des Hôpitaux de Marseille, and the International Atomic Energy Agency (IAEA). REFERENCES 1. Mulligan LM, Kwok JB, Healey CS, Elsdon MJ, Eng C, Gardner E, et al. Germline mutations of the RET proto-oncogene in multiple endocrine neoplasia type 2A. Nature 1993;363: Donis-Keller H, Dou S, Chi D, Carlson KM, Toshima K, Lairmore TC, et al. Mutations in the RET proto-oncogene are associated with MEN 2A and FMTC. Hum Mol Genet 1993;2: Mulligan LM, Marsh DJ, Robinson BG, Schuffenecker I, Zedenius J, Lips CJ, et al. Genotype-phenotype correlation in multiple endocrine neoplasia type 2: report of the International RET Mutation Consortium. J Intern Med 1995;238: Eng C, Clayton D, Schuffenecker I, Lenoir G, Cote G, Gagel RF, et al. The relationship between specific RET proto-oncogene mutations and disease phenotype in multiple endocrine neoplasia type 2. International RET mutation consortium analysis. JAMA 1996;276: Gartner W, Mineva I, Daneva T, Baumgartner-Parzer S, Niederle B, Vierhapper H, et al. A newly identified RET proto-oncogene polymorphism is found in a high number of endocrine tumor patients.hum Genet 2005;117: Robledo M, Gil L, Pollán M, Cebrián A, Ruíz S, Azañedo M, et al. Polymorphisms G691S/S904S of RET as genetic modifiers of MEN 2A. Cancer Res 2003;63: Telenius-Berg M, Berg B, Hamberger B, Tibblin S, Tisell LE, Ysander L, et al. Impact of screening on prognosis in the multiple endocrine neoplasia type 2 syndromes: natural history and treatment results in 105 patients. Henry Ford Hosp Med J 1984;32: Dralle H, Gimm O, Simon D, Frank-Raue K, Görtz G, Niederle B, et al. Prophylactic thyroidectomy in 75 children and adolescents with hereditary medullary thyroid carcinoma: German and Austrian 201

5 experience. World J Surg 1998;22: Gagel RF, Cote GJ, Martins Bugalho MJ, Boyd AE 3rd, Cummings T, Goepfert H, et al. Clinical use of molecular information in the management of multiple endocrine neoplasia type 2A. J Intern Med 1995;238: Barlier A, Vanbellinghen JF, Daly AF, Silvy M, Jaffrain-Rea ML, Trouillas J, et al. Mutations in the aryl hydrocarbon receptor interacting protein gene are not highly prevalent among subjects with sporadic pituitary adenomas. J Clin Endocrinol Metab 2007;92: Hecker KH, Roux KH. High and low annealing temperatures increase both specificity and yield in touchdown and stepdown PCR. Biotechniques 1996;20: Ainahi A, Kebbou M, Timinouni M, Benabdeljalil N, Fechtali T, Oufara S, et al. Study of the RET gene and his implication in thyroid cancer: Morocco case family. Indian J Cancer 2006;43: Peppa M, Boutati E, Kamakari S, Pikounis V, Peros G, Panayiotides IG, et al. Multiple endocrine neoplasia type 2A in two families with the familial medullary thyroid carcinoma associated G533C mutation of the RET proto-oncogene. Eur J Endocrinol 2008;159: Benazzouz B, Chraibi A, Doghmi Y, El Bacha S, Boutayeb S, Kadiri A, et al. [Characterization of RET proto-oncogene C634Y mutation in a Moroccan family with multiple endocrine neoplasia type 2A]. Ann Endocrinol 2006;67: Niccoli-Sire P, Murat A, Rohmer V, Franc S, Chabrier G, Baldet L, et al. Familial medullary thyroid carcinoma with noncysteine ret mutations: phenotype-genotype relationship in a large series of patients. J Clin Endocrinol Metab 2001;86: Berndt I, Reuter M, Saller B, Frank-Raue K, Groth P, Grussendorf M, et al. A new hot spot for mutations in the ret protooncogene causing familial medullary thyroid carcinoma and multiple endocrine neoplasia type 2A. J Clin Endocrinol Metab 1998;83: Schuffenecker I, Virally-Monod M, Brohet R, Goldgar D, Conte-Devolx B, Leclerc L, et al. Risk and penetrance of primary hyperparathyroidism in multiple endocrine neoplasia type 2A families with mutations at codon 634 of the RET proto-oncogene. Groupe D etude des Tumeurs à Calcitonine. J Clin Endocrinol Metab 1998;83: Raue F, Kraimps JL, Dralle H, Cougard P, Proye C, Frilling A, et al. Primary hyperparathyroidism in multiple endocrine neoplasia type 2A. J Intern Med 1995;238: Fernández RM, Peciña A, Antiñolo G, Navarro E, Borrego S. Analysis of RET polymorphisms and haplotypes in the context of sporadic medullary thyroid carcinoma.thyroid 2006;16: Lesueur F, Cebrian A, Robledo M, Niccoli-Sire P, Svensson KA, Pinson S, et al. Polymorphisms in RET and its coreceptors and ligands as genetic modifiers of multiple endocrine neoplasia type 2A. Cancer Res 2006;66: González B, Salcedo M, Medrano ME, Mantilla A, Quiñónez G, Benítez- Bribiesca L, et al. RET oncogene mutations in medullary thyroid carcinoma in Mexican families.arch Med Res 2003;34: Wohllk N, Cote GJ, Bugalho MM, Ordonez N, Evans DB, Goepfert H, et al. Relevance of RET proto-oncogene mutations in sporadic medullary thyroid carcinoma. J Clin Endocrinol Metab 1996;81: Gimm O, Neuberg DS, Marsh DJ, Dahia PL, Hoang-Vu C, Raue F, et al. Over-representation of a germline RET sequence variant in patients with sporadic medullary thyroid carcinoma and somatic RET codon 918 mutation. Oncogene 1999;18: Gimm O, Greco A, Hoang-Vu C, Dralle H, Pierotti MA, Eng C. Mutation analysis reveals novel sequence variants in NTRK1 in sporadic human medullary thyroid carcinoma. J Clin Endocrinol Metab 1999;84: Source of Support: Supported in part by the Oncogenetic Network from French Ministry, the assistance Publique des Hôpitaux de Marseille, and the International Atomic Energy Agency (IAEA)., Conflict of Interest: None declared. 202 J Cancer Res Ther - July-September Volume 5 - Issue 3

Study of the RET gene and his implication in thyroid cancer: Morocco case family

Study of the RET gene and his implication in thyroid cancer: Morocco case family Original Article Study of the RET gene and his implication in thyroid cancer: Morocco case family Abstract Ainahi A, Kebbou M*, Timinouni M**, Benabdeljalil N***, Fechtali T, Oufara S, El Antri S**** Laboratoire

More information

Supplementary Appendix

Supplementary Appendix Supplementary Appendix This appendix has been provided by the authors to give readers additional information about their work. Supplement to: Sherman SI, Wirth LJ, Droz J-P, et al. Motesanib diphosphate

More information

Supplementary Document

Supplementary Document Supplementary Document 1. Supplementary Table legends 2. Supplementary Figure legends 3. Supplementary Tables 4. Supplementary Figures 5. Supplementary References 1. Supplementary Table legends Suppl.

More information

Supplementary Table 3. 3 UTR primer sequences. Primer sequences used to amplify and clone the 3 UTR of each indicated gene are listed.

Supplementary Table 3. 3 UTR primer sequences. Primer sequences used to amplify and clone the 3 UTR of each indicated gene are listed. Supplemental Figure 1. DLKI-DIO3 mirna/mrna complementarity. Complementarity between the indicated DLK1-DIO3 cluster mirnas and the UTR of SOX2, SOX9, HIF1A, ZEB1, ZEB2, STAT3 and CDH1with mirsvr and PhastCons

More information

c Tuj1(-) apoptotic live 1 DIV 2 DIV 1 DIV 2 DIV Tuj1(+) Tuj1/GFP/DAPI Tuj1 DAPI GFP

c Tuj1(-) apoptotic live 1 DIV 2 DIV 1 DIV 2 DIV Tuj1(+) Tuj1/GFP/DAPI Tuj1 DAPI GFP Supplementary Figure 1 Establishment of the gain- and loss-of-function experiments and cell survival assays. a Relative expression of mature mir-484 30 20 10 0 **** **** NCP mir- 484P NCP mir- 484P b Relative

More information

a) Primary cultures derived from the pancreas of an 11-week-old Pdx1-Cre; K-MADM-p53

a) Primary cultures derived from the pancreas of an 11-week-old Pdx1-Cre; K-MADM-p53 1 2 3 4 5 6 7 8 9 10 Supplementary Figure 1. Induction of p53 LOH by MADM. a) Primary cultures derived from the pancreas of an 11-week-old Pdx1-Cre; K-MADM-p53 mouse revealed increased p53 KO/KO (green,

More information

Supplemental Data. Shin et al. Plant Cell. (2012) /tpc YFP N

Supplemental Data. Shin et al. Plant Cell. (2012) /tpc YFP N MYC YFP N PIF5 YFP C N-TIC TIC Supplemental Data. Shin et al. Plant Cell. ()..5/tpc..95 Supplemental Figure. TIC interacts with MYC in the nucleus. Bimolecular fluorescence complementation assay using

More information

Abbreviations: P- paraffin-embedded section; C, cryosection; Bio-SA, biotin-streptavidin-conjugated fluorescein amplification.

Abbreviations: P- paraffin-embedded section; C, cryosection; Bio-SA, biotin-streptavidin-conjugated fluorescein amplification. Supplementary Table 1. Sequence of primers for real time PCR. Gene Forward primer Reverse primer S25 5 -GTG GTC CAC ACT ACT CTC TGA GTT TC-3 5 - GAC TTT CCG GCA TCC TTC TTC-3 Mafa cds 5 -CTT CAG CAA GGA

More information

Table S1. Oligonucleotides used for the in-house RT-PCR assays targeting the M, H7 or N9. Assay (s) Target Name Sequence (5 3 ) Comments

Table S1. Oligonucleotides used for the in-house RT-PCR assays targeting the M, H7 or N9. Assay (s) Target Name Sequence (5 3 ) Comments SUPPLEMENTAL INFORMATION 2 3 Table S. Oligonucleotides used for the in-house RT-PCR assays targeting the M, H7 or N9 genes. Assay (s) Target Name Sequence (5 3 ) Comments CDC M InfA Forward (NS), CDC M

More information

Supplementary Figure 1. ROS induces rapid Sod1 nuclear localization in a dosagedependent manner. WT yeast cells (SZy1051) were treated with 4NQO at

Supplementary Figure 1. ROS induces rapid Sod1 nuclear localization in a dosagedependent manner. WT yeast cells (SZy1051) were treated with 4NQO at Supplementary Figure 1. ROS induces rapid Sod1 nuclear localization in a dosagedependent manner. WT yeast cells (SZy1051) were treated with 4NQO at different concentrations for 30 min and analyzed for

More information

Supplementary Materials

Supplementary Materials Supplementary Materials 1 Supplementary Table 1. List of primers used for quantitative PCR analysis. Gene name Gene symbol Accession IDs Sequence range Product Primer sequences size (bp) β-actin Actb gi

More information

Figure S1. Analysis of genomic and cdna sequences of the targeted regions in WT-KI and

Figure S1. Analysis of genomic and cdna sequences of the targeted regions in WT-KI and Figure S1. Analysis of genomic and sequences of the targeted regions in and indicated mutant KI cells, with WT and corresponding mutant sequences underlined. (A) cells; (B) K21E-KI cells; (C) D33A-KI cells;

More information

Nature Structural & Molecular Biology: doi: /nsmb Supplementary Figure 1

Nature Structural & Molecular Biology: doi: /nsmb Supplementary Figure 1 Supplementary Figure 1 U1 inhibition causes a shift of RNA-seq reads from exons to introns. (a) Evidence for the high purity of 4-shU-labeled RNAs used for RNA-seq. HeLa cells transfected with control

More information

Toluidin-Staining of mast cells Ear tissue was fixed with Carnoy (60% ethanol, 30% chloroform, 10% acetic acid) overnight at 4 C, afterwards

Toluidin-Staining of mast cells Ear tissue was fixed with Carnoy (60% ethanol, 30% chloroform, 10% acetic acid) overnight at 4 C, afterwards Toluidin-Staining of mast cells Ear tissue was fixed with Carnoy (60% ethanol, 30% chloroform, 10% acetic acid) overnight at 4 C, afterwards incubated in 100 % ethanol overnight at 4 C and embedded in

More information

Beta Thalassemia Case Study Introduction to Bioinformatics

Beta Thalassemia Case Study Introduction to Bioinformatics Beta Thalassemia Case Study Sami Khuri Department of Computer Science San José State University San José, California, USA sami.khuri@sjsu.edu www.cs.sjsu.edu/faculty/khuri Outline v Hemoglobin v Alpha

More information

A KINDRED WITH a RET CODON Y791F MUTATION PRESENTING WITH HIRSCHSPRUNG S S DISEASE.

A KINDRED WITH a RET CODON Y791F MUTATION PRESENTING WITH HIRSCHSPRUNG S S DISEASE. A KINDRED WITH a RET CODON Y791F MUTATION PRESENTING WITH HIRSCHSPRUNG S S DISEASE. ד"ר מרב פרנ קל ד גנית ברק גרוס דיויד פרופסור השרות לאנדוקרינ ולוגיה ומטבוליזם ירושלים ה דסה עין כר םם, Case Report 36

More information

Supplementary Figure 1 MicroRNA expression in human synovial fibroblasts from different locations. MicroRNA, which were identified by RNAseq as most

Supplementary Figure 1 MicroRNA expression in human synovial fibroblasts from different locations. MicroRNA, which were identified by RNAseq as most Supplementary Figure 1 MicroRNA expression in human synovial fibroblasts from different locations. MicroRNA, which were identified by RNAseq as most differentially expressed between human synovial fibroblasts

More information

Supplementary Figure 1 a

Supplementary Figure 1 a Supplementary Figure a Normalized expression/tbp (A.U.).6... Trip-br transcripts Trans Trans Trans b..5. Trip-br Ctrl LPS Normalized expression/tbp (A.U.) c Trip-br transcripts. adipocytes.... Trans Trans

More information

Supplementary Figures

Supplementary Figures Supplementary Figures Supplementary Figure 1. H3F3B expression in lung cancer. a. Comparison of H3F3B expression in relapsed and non-relapsed lung cancer patients. b. Prognosis of two groups of lung cancer

More information

Citation for published version (APA): Oosterveer, M. H. (2009). Control of metabolic flux by nutrient sensors Groningen: s.n.

Citation for published version (APA): Oosterveer, M. H. (2009). Control of metabolic flux by nutrient sensors Groningen: s.n. University of Groningen Control of metabolic flux by nutrient sensors Oosterveer, Maaike IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish to cite from it.

More information

BIOLOGY 621 Identification of the Snorks

BIOLOGY 621 Identification of the Snorks Name: Date: Block: BIOLOGY 621 Identification of the Snorks INTRODUCTION: In this simulation activity, you will examine the DNA sequence of a fictitious organism - the Snork. Snorks were discovered on

More information

Mutation Screening and Association Studies of the Human UCP 3 Gene in Normoglycemic and NIDDM Morbidly Obese Patients

Mutation Screening and Association Studies of the Human UCP 3 Gene in Normoglycemic and NIDDM Morbidly Obese Patients Mutation Screening and Association Studies of the Human UCP 3 Gene in Normoglycemic and NIDDM Morbidly Obese Patients Shuichi OTABE, Karine CLEMENT, Séverine DUBOIS, Frederic LEPRETRE, Veronique PELLOUX,

More information

Beta Thalassemia Sami Khuri Department of Computer Science San José State University Spring 2015

Beta Thalassemia Sami Khuri Department of Computer Science San José State University Spring 2015 Bioinformatics in Medical Product Development SMPD 287 Three Beta Thalassemia Sami Khuri Department of Computer Science San José State University Hemoglobin Outline Anatomy of a gene Hemoglobinopathies

More information

Detection of 549 new HLA alleles in potential stem cell donors from the United States, Poland and Germany

Detection of 549 new HLA alleles in potential stem cell donors from the United States, Poland and Germany HLA ISSN 2059-2302 BRIEF COMMUNICATION Detection of 549 new HLA alleles in potential stem cell donors from the United States, Poland and Germany C. J. Hernández-Frederick 1, N. Cereb 2,A.S.Giani 1, J.

More information

CD31 5'-AGA GAC GGT CTT GTC GCA GT-3' 5 ' -TAC TGG GCT TCG AGA GCA GT-3'

CD31 5'-AGA GAC GGT CTT GTC GCA GT-3' 5 ' -TAC TGG GCT TCG AGA GCA GT-3' Table S1. The primer sets used for real-time RT-PCR analysis. Gene Forward Reverse VEGF PDGFB TGF-β MCP-1 5'-GTT GCA GCA TGA ATC TGA GG-3' 5'-GGA GAC TCT TCG AGG AGC ACT T-3' 5'-GAA TCA GGC ATC GAG AGA

More information

Genetic Testing in Medullary Thyroid Carcinoma

Genetic Testing in Medullary Thyroid Carcinoma Genetic Testing in Medullary Thyroid Carcinoma Presenter-Dr Sunil Malla Bujar Barua Moderator- Prof Gaurav Agarwal 1 Genetic testing in MTC 24/4/2012 Background 1959 Hazard et al first described MTC 1961

More information

RET gene mutations and polymorphisms in medullary thyroid carcinomas in Indian patients

RET gene mutations and polymorphisms in medullary thyroid carcinomas in Indian patients RET gene mutations and polymorphisms in medullary thyroid carcinomas in Indian patients BP SHARMA and D SARANATH* Molecular Medicine, Reliance Life Sciences Pvt Ltd, Dhirubhai Ambani Life Sciences Center,

More information

Supplementary Table 2. Conserved regulatory elements in the promoters of CD36.

Supplementary Table 2. Conserved regulatory elements in the promoters of CD36. Supplementary Table 1. RT-qPCR primers for CD3, PPARg and CEBP. Assay Forward Primer Reverse Primer 1A CAT TTG TGG CCT TGT GCT CTT TGA TGA GTC ACA GAA AGA ATC AAT TC 1B AGG AAA TGA ACT GAT GAG TCA CAG

More information

Carcinoma midollare tiroideo familiare

Carcinoma midollare tiroideo familiare 12 AME Italian Meeting 6 Joint Meeting with AACE Carcinoma midollare tiroideo familiare Profilo genetico e stratificazione del rischio Maria Chiara Zatelli Sezione di Endocrinologia Dipartimento di Scienze

More information

Citation for published version (APA): Hofstra, R. M. W. (1995). The RET gene and its associated diseases s.n.

Citation for published version (APA): Hofstra, R. M. W. (1995). The RET gene and its associated diseases s.n. University of Groningen The RET gene and its associated diseases Hofstra, Robert Martinus Wouter IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish to cite

More information

A smart acid nanosystem for ultrasensitive. live cell mrna imaging by the target-triggered intracellular self-assembly

A smart acid nanosystem for ultrasensitive. live cell mrna imaging by the target-triggered intracellular self-assembly Electronic Supplementary Material (ESI) for Chemical Science. This journal is The Royal Society of Chemistry 2017 A smart ZnO@polydopamine-nucleic acid nanosystem for ultrasensitive live cell mrna imaging

More information

Nature Immunology: doi: /ni.3836

Nature Immunology: doi: /ni.3836 Supplementary Figure 1 Recombinant LIGHT-VTP induces pericyte contractility and endothelial cell activation. (a) Western blot showing purification steps for full length murine LIGHT-VTP (CGKRK) protein:

More information

What do you think of when you here the word genome?

What do you think of when you here the word genome? What do you think of when you here the word genome? What do you think of when you here the word genome? Personal Genomics Outline Review of pre-lab work Genomics and Medicine Case Overview & Assignment

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION doi: 10.1038/nature05883 SUPPLEMENTARY INFORMATION Supplemental Figure 1 Prostaglandin agonists and antagonists alter runx1/cmyb expression. a-e, Embryos were exposed to (b) PGE2 and (c) PGI2 (20μM) and

More information

www.lessonplansinc.com Topic: Protein Synthesis - Sentence Activity Summary: Students will simulate transcription and translation by building a sentence/polypeptide from words/amino acids. Goals & Objectives:

More information

Long-term outcome in 46 gene carriers of hereditary medullary thyroid carcinoma after prophylactic thyroidectomy: impact of individual RET genotype

Long-term outcome in 46 gene carriers of hereditary medullary thyroid carcinoma after prophylactic thyroidectomy: impact of individual RET genotype European Journal of Endocrinology (2006) 155 229 236 ISSN 0804-4643 CLINICAL STUDY Long-term outcome in 46 gene carriers of hereditary medullary thyroid carcinoma after prophylactic thyroidectomy: impact

More information

Characterizing intra-host influenza virus populations to predict emergence

Characterizing intra-host influenza virus populations to predict emergence Characterizing intra-host influenza virus populations to predict emergence June 12, 2012 Forum on Microbial Threats Washington, DC Elodie Ghedin Center for Vaccine Research Dept. Computational & Systems

More information

Supplementary Figure 1

Supplementary Figure 1 Metastatic melanoma Primary melanoma Healthy human skin Supplementary Figure 1 CD22 IgG4 Supplementary Figure 1: Immunohisochemical analysis of CD22+ (left) and IgG4 (right), cells (shown in red and indicated

More information

Genetics and Genomics in Endocrinology

Genetics and Genomics in Endocrinology Genetics and Genomics in Endocrinology Dr. Peter Igaz MD MSc PhD 2 nd Department of Medicine Faculty of Medicine Semmelweis University Genetics-based endocrine diseases I. Monogenic diseases: Multiple

More information

Supplementary Figure 1

Supplementary Figure 1 Supplementary Figure 1 Supplementary Figure 1. Lats1/2 deleted ihbs and ihps showed decreased transcripts of hepatocyte related genes (a and b) Western blots (a) and recombination PCR (b) of control and

More information

Astaxanthin prevents and reverses diet-induced insulin resistance and. steatohepatitis in mice: A comparison with vitamin E

Astaxanthin prevents and reverses diet-induced insulin resistance and. steatohepatitis in mice: A comparison with vitamin E Supplementary Information Astaxanthin prevents and reverses diet-induced insulin resistance and steatohepatitis in mice: A comparison with vitamin E Yinhua Ni, 1,2 Mayumi Nagashimada, 1 Fen Zhuge, 1 Lili

More information

BHP 2-7 and Nthy-ori 3-1 cells were grown in RPMI1640 medium (Hyclone) supplemented with 10% fetal bovine serum (Gibco), 2mM L-glutamine, and 100 U/mL

BHP 2-7 and Nthy-ori 3-1 cells were grown in RPMI1640 medium (Hyclone) supplemented with 10% fetal bovine serum (Gibco), 2mM L-glutamine, and 100 U/mL 1 2 3 4 Materials and Methods Cell culture BHP 2-7 and Nthy-ori 3-1 cells were grown in RPMI1640 medium (Hyclone) 5 supplemented with 10% fetal bovine serum (Gibco), 2mM L-glutamine, and 100 U/mL 6 penicillin-streptomycin.

More information

Chasing the ubiquitous RET proto-oncogene in South African MEN2 families implications for the surgeon

Chasing the ubiquitous RET proto-oncogene in South African MEN2 families implications for the surgeon Chasing the ubiquitous RET proto-oncogene in South African MEN2 families implications for the surgeon S. W. MOORE, M.B. CH.B., F.R.C.S. (EDIN.), M.D. Division of Paediatric Surgery, Department of Surgical

More information

Lezione 10. Sommario. Bioinformatica. Lezione 10: Sintesi proteica Synthesis of proteins Central dogma: DNA makes RNA makes proteins Genetic code

Lezione 10. Sommario. Bioinformatica. Lezione 10: Sintesi proteica Synthesis of proteins Central dogma: DNA makes RNA makes proteins Genetic code Lezione 10 Bioinformatica Mauro Ceccanti e Alberto Paoluzzi Lezione 10: Sintesi proteica Synthesis of proteins Dip. Informatica e Automazione Università Roma Tre Dip. Medicina Clinica Università La Sapienza

More information

Journal of Cell Science Supplementary information. Arl8b +/- Arl8b -/- Inset B. electron density. genotype

Journal of Cell Science Supplementary information. Arl8b +/- Arl8b -/- Inset B. electron density. genotype J. Cell Sci. : doi:.4/jcs.59: Supplementary information E9. A Arl8b /- Arl8b -/- Arl8b Arl8b non-specific band Gapdh Tbp E7.5 HE Inset B D Control al am hf C E Arl8b -/- al am hf E8.5 F low middle high

More information

SUPPLEMENTARY DATA. Supplementary Table 1. Primer sequences for qrt-pcr

SUPPLEMENTARY DATA. Supplementary Table 1. Primer sequences for qrt-pcr Supplementary Table 1. Primer sequences for qrt-pcr Gene PRDM16 UCP1 PGC1α Dio2 Elovl3 Cidea Cox8b PPARγ AP2 mttfam CyCs Nampt NRF1 16s-rRNA Hexokinase 2, intron 9 β-actin Primer Sequences 5'-CCA CCA GCG

More information

Supplementary Figure 1a

Supplementary Figure 1a Supplementary Figure 1a Hours: E-cadherin TGF-β On TGF-β Off 0 12 24 36 48 24 48 72 Vimentin βactin Fig. S1a. Treatment of AML12 cells with TGF-β induces EMT. Treatment of AML12 cells with TGF-β results

More information

Supplemental Information. Th17 Lymphocytes Induce Neuronal. Cell Death in a Human ipsc-based. Model of Parkinson's Disease

Supplemental Information. Th17 Lymphocytes Induce Neuronal. Cell Death in a Human ipsc-based. Model of Parkinson's Disease Cell Stem Cell, Volume 23 Supplemental Information Th17 Lymphocytes Induce Neuronal Cell Death in a Human ipsc-based Model of Parkinson's Disease Annika Sommer, Franz Maxreiter, Florian Krach, Tanja Fadler,

More information

Screening of six risk exons of the RET proto-oncogene in families with medullary thyroid carcinoma in the Czech Republic

Screening of six risk exons of the RET proto-oncogene in families with medullary thyroid carcinoma in the Czech Republic 257 Screening of six risk exons of the RET proto-oncogene in families with medullary thyroid carcinoma in the Czech Republic Š Jindřichová, J Včelák, P Vlček 1, M Neradilová 1,JNěmec 1 and B Bendlová Department

More information

Relationship of the APOA5/A4/C3/A1 gene cluster and APOB gene polymorphisms with dyslipidemia

Relationship of the APOA5/A4/C3/A1 gene cluster and APOB gene polymorphisms with dyslipidemia elationship of the APOA5/A4/C3/A1 gene cluster and APOB gene polymorphisms with dyslipidemia H.J. Ou 1, G. Huang 2, W. Liu 3, X.L. Ma 2, Y. Wei 4, T. Zhou 5 and Z.M. Pan 3 1 Department of Neurology, The

More information

Supplemental Information. Cancer-Associated Fibroblasts Neutralize. the Anti-tumor Effect of CSF1 Receptor Blockade

Supplemental Information. Cancer-Associated Fibroblasts Neutralize. the Anti-tumor Effect of CSF1 Receptor Blockade Cancer Cell, Volume 32 Supplemental Information Cancer-Associated Fibroblasts Neutralize the Anti-tumor Effect of CSF1 Receptor Blockade by Inducing PMN-MDSC Infiltration of Tumors Vinit Kumar, Laxminarasimha

More information

Culture Density (OD600) 0.1. Culture Density (OD600) Culture Density (OD600) Culture Density (OD600) Culture Density (OD600)

Culture Density (OD600) 0.1. Culture Density (OD600) Culture Density (OD600) Culture Density (OD600) Culture Density (OD600) A. B. C. D. E. PA JSRI JSRI 2 PA DSAM DSAM 2 DSAM 3 PA LNAP LNAP 2 LNAP 3 PAO Fcor Fcor 2 Fcor 3 PAO Wtho Wtho 2 Wtho 3 Wtho 4 DTSB Low Iron 2 4 6 8 2 4 6 8 2 22 DTSB Low Iron 2 4 6 8 2 4 6 8 2 22 DTSB

More information

A 93-year-old MEN2A mutation carrier without Medullary Thyroid Carcinoma: a case report and overview of the literature

A 93-year-old MEN2A mutation carrier without Medullary Thyroid Carcinoma: a case report and overview of the literature A 93-year-old mutation carrier without Medullary Thyroid Carcinoma: a case report and overview of the literature Karin van der Tuin 1, Nandy Hofland 1, Natasha M. Appelman-Dijkstra 2, Rob B. van der Luijt

More information

Shifrin et al Surgery Volume 148, Number 6

Shifrin et al Surgery Volume 148, Number 6 Single nucleotide polymorphisms act as modifiers and correlate with the development of medullary and simultaneous medullary/papillary thyroid carcinomas in 2 large, non-related families with the RET V804M

More information

Baseline clinical characteristics for the 81 CMML patients Routine diagnostic testing and statistical analyses... 3

Baseline clinical characteristics for the 81 CMML patients Routine diagnostic testing and statistical analyses... 3 Next-Generation Sequencing Technology Reveals a Characteristic Pattern of Molecular Mutations in 72.8% of Chronic Myelomonocytic Leukemia (CMML) by Detecting Frequent Alterations in TET2, CBL, RAS, and

More information

Supporting Information

Supporting Information Supporting Information Malapeira et al. 10.1073/pnas.1217022110 SI Materials and Methods Plant Material and Growth Conditions. A. thaliana seedlings were stratified at 4 C in the dark for 3 d on Murashige

More information

SUPPORTING INFORMATION

SUPPORTING INFORMATION SUPPORTING INFORMATION Biology is different in small volumes: endogenous signals shape phenotype of primary hepatocytes cultured in microfluidic channels Amranul Haque, Pantea Gheibi, Yandong Gao, Elena

More information

Result Navigator. Positive Test Result: RET. After a positive test result, there can be many questions about what to do next. Navigate Your Results

Result Navigator. Positive Test Result: RET. After a positive test result, there can be many questions about what to do next. Navigate Your Results Result Navigator Positive Test Result: RET Positive test results identify a change, or misspelling, of DNA that is known or predicted to cause an increased risk for cancer. DNA is the blueprint of life

More information

Clinical significance of RET mutation screening in a pedigree of multiple endocrine neoplasia type 2A

Clinical significance of RET mutation screening in a pedigree of multiple endocrine neoplasia type 2A MOLECULAR MEDICINE REPORTS 14: 1413-1417, 2016 Clinical significance of RET mutation screening in a pedigree of multiple endocrine neoplasia type 2A RONGBIAO YING and JUN FENG Department of Surgical Oncology,

More information

Frequency of mosaicism points towards mutation prone early cleavage cell divisions.

Frequency of mosaicism points towards mutation prone early cleavage cell divisions. Frequency of mosaicism points towards mutation prone early cleavage cell divisions. Chad Harland, Wouter Coppieters, Latifa Karim, Carole Charlier, Michel Georges Germ-line de novo mutations Definition:

More information

Nucleotide Sequence of the Australian Bluetongue Virus Serotype 1 RNA Segment 10

Nucleotide Sequence of the Australian Bluetongue Virus Serotype 1 RNA Segment 10 J. gen. Virol. (1988), 69, 945-949. Printed in Great Britain 945 Key words: BTV/genome segment lo/nucleotide sequence Nucleotide Sequence of the Australian Bluetongue Virus Serotype 1 RNA Segment 10 By

More information

CIRCRESAHA/2004/098145/R1 - ONLINE 1. Validation by Semi-quantitative Real-Time Reverse Transcription PCR

CIRCRESAHA/2004/098145/R1 - ONLINE 1. Validation by Semi-quantitative Real-Time Reverse Transcription PCR CIRCRESAHA/2004/098145/R1 - ONLINE 1 Expanded Materials and Methods Validation by Semi-quantitative Real-Time Reverse Transcription PCR Expression patterns of 13 genes (Online Table 2), selected with respect

More information

Multiple endocrine neoplasia type 2A in two families with the familial medullary thyroid carcinoma associated G533C mutation of the RET proto-oncogene

Multiple endocrine neoplasia type 2A in two families with the familial medullary thyroid carcinoma associated G533C mutation of the RET proto-oncogene European Journal of Endocrinology (2008) 159 767 771 ISSN 0804-4643 CLINICAL STUDY Multiple endocrine neoplasia type 2A in two families with the familial medullary thyroid carcinoma associated G533C mutation

More information

Early or prophylactic thyroidectomy in MEN 2/FMTC gene carriers: results in 71 thyroidectomized patients

Early or prophylactic thyroidectomy in MEN 2/FMTC gene carriers: results in 71 thyroidectomized patients European Journal of Endocrinology (1999) 141 468 474 ISSN 0804-4643 CLINICAL STUDY Early or prophylactic thyroidectomy in MEN 2/FMTC gene carriers: results in 71 thyroidectomized patients Patricia Niccoli-Sire

More information

Integration Solutions

Integration Solutions Integration Solutions (1) a) With no active glycosyltransferase of either type, an ii individual would not be able to add any sugars to the O form of the lipopolysaccharide. Thus, the only lipopolysaccharide

More information

Diagnostic Challenges in Multiple Endocrine Neoplasia Type 1 (MEN1) : Usefulness of Genetic Analysis

Diagnostic Challenges in Multiple Endocrine Neoplasia Type 1 (MEN1) : Usefulness of Genetic Analysis Diagnostic Challenges in Multiple Endocrine Neoplasia Type 1 (MEN1) : Usefulness of Genetic Analysis Professor R. V. Thakker, FRS May Professor of Medicine University of Oxford, U.K. Meet The Experts 49

More information

Cross-talk between mineralocorticoid and angiotensin II signaling for cardiac

Cross-talk between mineralocorticoid and angiotensin II signaling for cardiac ONLINE SUPPLEMENT TO Crosstalk between mineralocorticoid and angiotensin II signaling for cardiac remodeling An Di ZHANG,,3, Aurelie NGUYEN DINH CAT*,,3, Christelle SOUKASEUM *,,3, Brigitte ESCOUBET, 4,

More information

Mutation analysis of a Chinese family with oculocutaneous albinism

Mutation analysis of a Chinese family with oculocutaneous albinism /, 2016, Vol. 7, (No. 51), pp: 84981-84988 Mutation analysis of a Chinese family with oculocutaneous albinism Xiong Wang 1, Yaowu Zhu 1, Na Shen 1, Jing Peng 1, Chunyu Wang 1, Haiyi Liu 2, Yanjun Lu 1

More information

Supplementary Figure 1

Supplementary Figure 1 Supplementary Figure 1 Supplementary Figure 1: Cryopreservation alters CD62L expression by CD4 T cells. Freshly isolated (left) or cryopreserved PBMCs (right) were stained with the mix of antibodies described

More information

Supplementary Figure 1

Supplementary Figure 1 Supplementary Figure 1 3 3 3 1 1 Bregma -1.6mm 3 : Bregma Ref) Http://www.mbl.org/atlas165/atlas165_start.html Bregma -.18mm Supplementary Figure 1 Schematic representation of the utilized brain slice

More information

Nucleotide diversity of the TNF gene region in an African village

Nucleotide diversity of the TNF gene region in an African village (2001) 2, 343 348 2001 Nature Publishing Group All rights reserved 1466-4879/01 $15.00 www.nature.com/gene Nucleotide diversity of the TNF gene region in an African village A Richardson 1, F Sisay-Joof

More information

Heide Siggelkow, Ariane Melzer, Wilhelm Nolte, Klara Karsten, Wolfgang HoÈppner 1 and Michael HuÈ fner

Heide Siggelkow, Ariane Melzer, Wilhelm Nolte, Klara Karsten, Wolfgang HoÈppner 1 and Michael HuÈ fner European Journal of Endocrinology (2001) 144 467±473 ISSN 0804-4643 CLINICAL STUDY Presentation of a kindred with familial medullary thyroid carcinoma and Cys611Phe mutation of the RET proto-oncogene demonstrating

More information

Molecular Testing for Somatic Mutations Improves the Accuracy of Thyroid Fine-needle Aspiration Biopsy

Molecular Testing for Somatic Mutations Improves the Accuracy of Thyroid Fine-needle Aspiration Biopsy World J Surg (2010) 34:2589 2594 DOI 10.1007/s00268-010-0720-0 Molecular Testing for Somatic Mutations Improves the Accuracy of Thyroid Fine-needle Aspiration Biopsy Willieford Moses Julie Weng Ileana

More information

Formylpeptide receptor2 contributes to colon epithelial homeostasis, inflammation, and tumorigenesis

Formylpeptide receptor2 contributes to colon epithelial homeostasis, inflammation, and tumorigenesis Supplementary Data Formylpeptide receptor2 contributes to colon epithelial homeostasis, inflammation, and tumorigenesis Keqiang Chen, Mingyong Liu, Ying Liu, Teizo Yoshimura, Wei Shen, Yingying Le, Scott

More information

Expression of Selected Inflammatory Cytokine Genes in Bladder Biopsies

Expression of Selected Inflammatory Cytokine Genes in Bladder Biopsies Borneo Journal of Resource Science and Technology (2013) 3(2): 15-20 Expression of Selected Inflammatory Cytokine Genes in Bladder Biopsies EDMUND UI-HANG SIM *1, NUR DIANA ANUAR 2, TENG-AIK ONG 3, GUAN-

More information

Cancer Genetics 204 (2011) 45e52

Cancer Genetics 204 (2011) 45e52 Cancer Genetics 204 (2011) 45e52 Exon scanning by reverse transcriptaseepolymerase chain reaction for detection of known and novel EML4eALK fusion variants in nonesmall cell lung cancer Heather R. Sanders

More information

Timing of Early Preventative Thyroidectomy in Children with MEN 2

Timing of Early Preventative Thyroidectomy in Children with MEN 2 Timing of Early Preventative Thyroidectomy in Children with MEN 2 Terry C. Lairmore, M.D. Professor of Surgery Director, Division of Surgical Oncology Texas Chapter of AACE Texas Endocrine Surgical Symposium

More information

Description of Supplementary Files. File Name: Supplementary Information Description: Supplementary Figures and Supplementary Tables

Description of Supplementary Files. File Name: Supplementary Information Description: Supplementary Figures and Supplementary Tables Description of Supplementary Files File Name: Supplementary Information Description: Supplementary Figures and Supplementary Tables Supplementary Figure 1: (A), HCT116 IDH1-WT and IDH1-R132H cells were

More information

Plasmids Western blot analysis and immunostaining Flow Cytometry Cell surface biotinylation RNA isolation and cdna synthesis

Plasmids Western blot analysis and immunostaining Flow Cytometry Cell surface biotinylation RNA isolation and cdna synthesis Plasmids psuper-retro-s100a10 shrna1 was constructed by cloning the dsdna oligo 5 -GAT CCC CGT GGG CTT CCA GAG CTT CTT TCA AGA GAA GAA GCT CTG GAA GCC CAC TTT TTA-3 and 5 -AGC TTA AAA AGT GGG CTT CCA GAG

More information

Advanced Subsidiary Unit 1: Lifestyle, Transport, Genes and Health

Advanced Subsidiary Unit 1: Lifestyle, Transport, Genes and Health Write your name here Surname Other names Edexcel GCE Centre Number Candidate Number Biology Advanced Subsidiary Unit 1: Lifestyle, Transport, Genes and Health Thursday 8 January 2009 Morning Time: 1 hour

More information

A basic helix loop helix transcription factor controls cell growth

A basic helix loop helix transcription factor controls cell growth A basic helix loop helix transcription factor controls cell growth and size in root hairs Keke Yi 1,2, Benoît Menand 1,3, Elizabeth Bell 1, Liam Dolan 1,4 Supplementary note Low soil phosphate availability

More information

Endocrine Surgery. Characteristics of the Germline MEN1 Mutations in Korea: A Literature Review ORIGINAL ARTICLE. The Korean Journal of INTRODUCTION

Endocrine Surgery. Characteristics of the Germline MEN1 Mutations in Korea: A Literature Review ORIGINAL ARTICLE. The Korean Journal of INTRODUCTION ORIGINAL ARTICLE ISSN 1598-1703 (Print) ISSN 2287-6782 (Online) Korean J Endocrine Surg 2014;14:7-11 The Korean Journal of Endocrine Surgery Characteristics of the Germline MEN1 Mutations in Korea: A Literature

More information

Nine Novel Germline Gene Variants in the RET Proto- Oncogene Identified in Twelve Unrelated Cases

Nine Novel Germline Gene Variants in the RET Proto- Oncogene Identified in Twelve Unrelated Cases Journal of Molecular Diagnostics, Vol. 7, No. 2, May 2005 Copyright American Society for Investigative Pathology and the Association for Molecular Pathology Nine Novel Germline Gene Variants in the RET

More information

Supplementary Information. Bamboo shoot fiber prevents obesity in mice by. modulating the gut microbiota

Supplementary Information. Bamboo shoot fiber prevents obesity in mice by. modulating the gut microbiota Supplementary Information Bamboo shoot fiber prevents obesity in mice by modulating the gut microbiota Xiufen Li 1,2, Juan Guo 1, Kailong Ji 1,2, and Ping Zhang 1,* 1 Key Laboratory of Tropical Plant Resources

More information

Long Term Parathyroid Function Following Total Parathyroidectomy with Autotransplantation in Adult Patients with MEN2A

Long Term Parathyroid Function Following Total Parathyroidectomy with Autotransplantation in Adult Patients with MEN2A Endocrine Journal 2009, 56 (4), 545-551 Long Term Parathyroid Function Following Total Parathyroidectomy with Autotransplantation in Adult Patients with MEN2A Shigeru YOSHIDA*, Tsuneo IMAI*, Toyone KIKUMORI*,

More information

Prophylactic Thyroidectomy in Multiple Endocrine Neoplasia Type 2A

Prophylactic Thyroidectomy in Multiple Endocrine Neoplasia Type 2A original article Prophylactic Thyroidectomy in Multiple Endocrine Neoplasia Type 2A Michael A. Skinner, M.D., Jeffrey A. Moley, M.D., William G. Dilley, Ph.D., Kouros Owzar, Ph.D., Mary K. DeBenedetti,

More information

Supporting Information. Mutational analysis of a phenazine biosynthetic gene cluster in

Supporting Information. Mutational analysis of a phenazine biosynthetic gene cluster in Supporting Information for Mutational analysis of a phenazine biosynthetic gene cluster in Streptomyces anulatus 9663 Orwah Saleh 1, Katrin Flinspach 1, Lucia Westrich 1, Andreas Kulik 2, Bertolt Gust

More information

The c-ret pathway and. K. Homicsko, Lucerne

The c-ret pathway and. K. Homicsko, Lucerne The c-ret pathway and biomarkers K. Homicsko, 2.11.12 Lucerne Origins 1. c-ret is a proto-oncogene on chromosome 10 (10q11.2) 2. «rearranged during transfection» 3. Synonyms: CDHF12, HSCR1, MEN2A, MEN2B,

More information

Supplementary information

Supplementary information Supplementary information Unique polypharmacology nuclear receptor modulator blocks inflammatory signaling pathways Mi Ra Chang 1, Anthony Ciesla 1, Timothy S. Strutzenberg 1, Scott J. Novick 1, Yuanjun

More information

*To whom correspondence should be addressed. This PDF file includes:

*To whom correspondence should be addressed.   This PDF file includes: www.sciencemag.org/cgi/content/full/science.1212182/dc1 Supporting Online Material for Partial Retraction to Detection of an Infectious Retrovirus, XMRV, in Blood Cells of Patients with Chronic Fatigue

More information

The Clinical Performance of Primary HPV Screening, Primary HPV Screening Plus Cytology Cotesting, and Cytology Alone at a Tertiary Care Hospital

The Clinical Performance of Primary HPV Screening, Primary HPV Screening Plus Cytology Cotesting, and Cytology Alone at a Tertiary Care Hospital The Clinical Performance of Primary HPV Screening, Primary HPV Screening Plus Cytology Cotesting, and Cytology Alone at a Tertiary Care Hospital Jung-Woo Choi MD, PhD; Younghye Kim MD, PhD; Ju-Han Lee

More information

MEDULLARY THYROID CARCINOMA (MTC) can be

MEDULLARY THYROID CARCINOMA (MTC) can be 0021-972X/04/$15.00/0 The Journal of Clinical Endocrinology & Metabolism 89(11):5823 5827 Printed in U.S.A. Copyright 2004 by The Endocrine Society doi: 10.1210/jc.2004-0312 Identification of a Novel Point

More information

Research Article CD79B and MYD88 Mutations in Splenic Marginal Zone Lymphoma

Research Article CD79B and MYD88 Mutations in Splenic Marginal Zone Lymphoma ISRN Oncology Volume 2013, Article ID 252318, 4 pages http://dx.doi.org/10.1155/2013/252318 Research Article CD79B and MYD88 Mutations in Splenic Marginal Zone Lymphoma Gunhild Trøen, 1 Abdirashid Warsame,

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION SUPPLEMENTARY INFORMATION doi:10.1038/nature10743 Supplementary Figures and Legends Supplementary Figure 1. CYP17A1 (red boxes) lies at the intersection of steroid hormone biosynthetic pathways. CYP17A1

More information

Calcitonin. 1

Calcitonin.  1 Calcitonin Medullary thyroid carcinoma (MTC) is characterized by a high concentration of serum calcitonin. Routine measurement of serum calcitonin concentration has been advocated for detection of MTC

More information

Mechanistic and functional insights into fatty acid activation in Mycobacterium tuberculosis SUPPLEMENTARY INFORMATION

Mechanistic and functional insights into fatty acid activation in Mycobacterium tuberculosis SUPPLEMENTARY INFORMATION Mechanistic and functional insights into fatty acid activation in Mycobacterium tuberculosis Pooja Arora 1, Aneesh Goyal 2, Vivek T atarajan 1, Eerappa Rajakumara 2, Priyanka Verma 1, Radhika Gupta 3,

More information

Supplementary Materials and Methods

Supplementary Materials and Methods DD2 suppresses tumorigenicity of ovarian cancer cells by limiting cancer stem cell population Chunhua Han et al. Supplementary Materials and Methods Analysis of publicly available datasets: To analyze

More information

PATIENTS AND METHODS. Subjects

PATIENTS AND METHODS. Subjects PATIENTS AND METHODS Subjects Twenty-nine morbidly obese subjects involved in a gastric surgery program were enrolled in the study between October 25 and March 21. Bariatric surgery was performed in patients

More information

Loyer, et al. microrna-21 contributes to NASH Suppl 1/15

Loyer, et al. microrna-21 contributes to NASH Suppl 1/15 Loyer, et al. microrna-21 contributes to NASH Suppl 1/15 SUPPLEMENTARY MATERIAL: Liver MicroRNA-21 is Overexpressed in Non Alcoholic Steatohepatitis and Contributes to the Disease in Experimental Models

More information