Evolution of chromosomes and genomes

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1 volution of chromosomes and genomes oe Felsenstein GNOM 453, Autumn 2011 volution of chromosomes and genomes p.1/36

2 Chromosome rearrangements Inversion Translocation Transposition Tetraploidy flip move switch Additional question: when these occur they are rare in a population: how do they spread? volution of chromosomes and genomes p.2/36

3 Chironomus banded chromosomes volution of chromosomes and genomes p.3/36

4 Paracentric and pericentric inversions A Paracentric Inversion A B C D F G H I A B C D F G H I A B F D C G H I A B F D C G H I A Pericentric Inversion A B C D F G H I A B C D F G H I A B C H G F D I A B C H G F D I volution of chromosomes and genomes p.4/36

5 Pairing in a paracentric inversion heterozygote D C C D F F A B G H I A B G H I volution of chromosomes and genomes p.5/36

6 Crossover in a paracentric inversion heterozygote D C C D F F A B G H I A B G H I volution of chromosomes and genomes p.6/36

7 These two chromosomes did not cross over D C C D F F A B G H I A B G H I volution of chromosomes and genomes p.7/36

8 This one did. How will it segregate? D C F A B A B volution of chromosomes and genomes p.8/36

9 This one did too. How will it segregate? C D F G H I G H I volution of chromosomes and genomes p.9/36

10 Pairing in a pericentric inversion heterozygote F G F G D A B C D H H I A B C I volution of chromosomes and genomes p.10/36

11 Crossover in a pericentric inversion heterozygote F G F G D A B C D H H I A B C I volution of chromosomes and genomes p.11/36

12 These two products didn t undergo crossing-over F G F G D A B C D H H I A B C I volution of chromosomes and genomes p.12/36

13 One that did. Is anything deleted? Duplicated? D A B C F G H A B C volution of chromosomes and genomes p.13/36

14 The other one that did. Anything deleted, duplicated? F G D H I I volution of chromosomes and genomes p.14/36

15 A translocation Before A B C D F G H I K L M N O P Q Breaks A B C D F G H I K L M N O P Q Rearrangement Q F G H I K L M N O P D C B A After Q F G H I K L M N O P D C B A volution of chromosomes and genomes p.15/36

16 Segregation of translocation heterozygote at first division of meiosis metaphase A B C D A B C D I H G F P O N M L K I H G F P O N M L K Q Q A pair of translocated chromosomes pairs with a pair of untranslocated chromosomes volution of chromosomes and genomes p.16/36

17 Adjacent segregation in translocations A B C D N O P K L M F G H I A B C D F G H I Q Q N O P K L M... Leads to deletions and duplications. volution of chromosomes and genomes p.17/36

18 Alternate segregation in translocations F G H I Q A B C D N O P K L M Q N O P K L M F G H I A B C D... Leads to euploid (normal gene complement) gametes volution of chromosomes and genomes p.18/36

19 Banding pattern changes in two species of Chironomus midges volution of chromosomes and genomes p.19/36

20 Polytene Drosophila chromosomes volution of chromosomes and genomes p.20/36

21 Chromosome phylogeny of Drosophila pseudoobscura etc volution of chromosomes and genomes p.21/36

22 Chromosome phylogeny of Hawaiian Drosophila volution of chromosomes and genomes p.22/36

23 Formation of the Hawaiian islands plate hot spot volution of chromosomes and genomes p.23/36

24 Geology of the Hawaiian islands A chain of seamounts leads northwest back across the Pacific as far as the Kamchatka peninsula of Siberia, an estimated 85 million years. volution of chromosomes and genomes p.24/36

25 Inferred migration events on the Hawaiian islands volution of chromosomes and genomes p.25/36

26 When a tetraploid mates with a diploid a tetraploid an ordinary diploid gametes triploid offspring volution of chromosomes and genomes p.26/36

27 The gametes are aneuploid a tetraploid an ordinary diploid gametes triploid offspring gametes volution of chromosomes and genomes p.27/36

28 And so are the offspring a tetraploid an ordinary diploid gametes triploid offspring gametes the resulting aneuploid offspring volution of chromosomes and genomes p.28/36

29 Polyploid evolution in Clarkia C. Williamsonii Fort Miller Clarkia volution of chromosomes and genomes p.29/36

30 The fern Ophioglossum, high number champion Adders-tongue fern Highest number is in this genus, about 1440 chromosomes, or 720 pairs. volution of chromosomes and genomes p.30/36

31 The ant Myrmecia, low chromosome number champion Myrmecia pilosula, the ack-jumper ant volution of chromosomes and genomes p.31/36

32 Distribution of chromosome numbers in mammals volution of chromosomes and genomes p.32/36

33 Karyotypes of Drosophila species volution of chromosomes and genomes p.33/36

34 Karyotypes of gymnosperms volution of chromosomes and genomes p.34/36

35 Human and mouse genomes compared volution of chromosomes and genomes p.35/36

36 Human and chimp karyotypes compared volution of chromosomes and genomes p.36/36

Evolution of chromosomes and genomes

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