Cell biology of AB toxins

Size: px
Start display at page:

Download "Cell biology of AB toxins"

Transcription

1 Cell biology of AB toxins Gisou van der Goot, EPFL Lausanne EMBO/FEBS Advanced course at Spetses, Greece, September 1-9, 2010

2 Bacterial protein toxins Definition: Proteins released by bacteria into the extracellular medium that affect cellular functions of target cells

3 Classifications Where they act: Plasma membrane Cytoplasm Lumen of organelles What they act on: Membrane Cytoskeleton Protein synthesis - Activity: no enzymatic activity pore-forming toxins Enzymatic activity Lipase Protease ADP ribosyltransferase Glucosidase Adenylate cyclase. --> cytoplasmic targets

4 How do they reach their target?

5 Difference between toxins and type III or IV effectors: Mode of delivery A subunit: Enzymatic activity B-subunit Toxin: Multi subunit protein Or Independent polypeptide chains Spanò S, Galán JE. Curr Opin Microbiol. 2008

6

7 They must therefore cross a membrane elsewhere in the cell To reach the cytosol, toxins must cross 1 membrane Figure 12-1 Molecular Biology of the Cell ( Garland Science 2008)

8 Membrane bound organelles probably originate from invaginations of the plasma membrane Space continuous with the outside of the cell Figure 12-4a Molecular Biology of the Cell ( Garland Science 2008) The lumen of all organelles are topologically equivalent to each other and to the extracellular space

9 Entry portals into the cell Marsh and Helenius, Cell 2006

10 Questions How do toxins get in? To what compartment do they go? How do they cross the membrane? What do they do once they get to the other side?.

11 Two examples Cholera toxin A subunit: Enzymatic activity B-subunit X X Anthrax toxin X 2 A subunits B-subunit

12 Is there a place in the cell where proteins get transported across membrane? 12

13 Figure Molecular Biology of the Cell ( Garland Science 2008)

14 Proteins are folded and assembled in the ER with the help of chaperones and folding enzymes (Anelli and Sitia, EMBO J. 2008)

15 In case of failure, misfolded proteins are retro translocated into the cytosol, polyubiquitinated and degraded by the proteasome The ERAD pathway Protein folding is not that efficient, for some proteins efficiency is 20% (Cystic fribosis CFTR)

16 ER resident proteins are either retained in the ER or retrieved from the Golgi through the KDEL receptor Golgi Endoplasmic reticulum

17 Cholera toxin: AB 5 toxin Petameric B subunit ADP-ribosyltransferase that modifies the Gα subunit of the host adenylate cyclase Receptor: Ganglioside GM1

18 Enzymatic activity of cholera ADP-ribosyltransferase Target is Gi of Adenylate cyclase: leads to a constitutively active form Increase in camp Opening of chloride channels Exit of Na + Exit of H 2 0

19 Cholera toxin can enter cells via multiple pathways Endocytosis is driven by the interaction with GM1 and depends on the clustering of the GM1 by the B pentamer and on the length of the GM1 acyl chains Marsh and Helenius, Cell 2006

20 Cholera toxin triggered signaling to the endocytic machineries requires transbilayer coupling

21 Transbilayer coupling Helenius group, ETHZ

22 Under control of the B-subunit Cholera toxin Early Endosomes Under control of the A-subunit Golgi Endoplasmic Reticulum Late Endosomes Lysosomes

23 How Cholera toxin hijacks the early secretory pathway Golgi A subunit has a C- terminal KDEL sequence -> signal for retrieval to the ER ER The A subunit is recognized as unfolded and undergoes retrotranslocation to the cytoplasm Due to the low lysine content of the A subunit the protein is not ubiquitinated and degraded

24 Proteins are folded and assembled in the ER with the help of chaperones and folding enzymes (Anelli and Sitia, EMBO J. 2008)

25 In case of failure, misfolded proteins are retro translocated into the cytosol, polyubiquitinated and degraded by the proteasome The ERAD pathway Protein folding is not that efficient, for some proteins efficiency is 20% (Cystic fribosis CFTR)

26 Very interesting novel variant of this class of toxin: SubAB produced by certain pathogenic E. coli strains SubAB: A-B5 like cholera toxin of Shiga toxin A sub-unit looks like subtilisin B subunit binds GM2 Never reaches the cytoplasm: 1st toxin that acts in the lumen of a comparment of the endomembrane system SubAB cleaves Bip/GRP78: ER lumen Hsp70 familly member

27 Bip: a master regulators of the ER Maintains the permeability barrier by blocking the non engaged translocons Acts as a chaprone for emerging nascent chains Bring misfolded proteins to the retrotranslocon a master regulator of the unfolded protein response SubAB cleaves between the ATPase domain and the petide binding domains and kills cells very rapidly

28 Anthrax toxin is tripartite PA: Protective antigen, bares similarities to pore-forming toxins EF: Edema factor, calmodulin dependent adenylate cyclase LF: Lethal factor, metalloprotease shown to cleave MAPKKs

29 Mode of action of PA Acidic ph (Modified from Prince, J Clin Invest. 2003)

30 Acidic ph (Prince, J Clin Invest. 2003)

31 Anthrax toxin receptor (ATRs) Von Willebrand A domain Ig-like domain vwa TM CT

32 Protective antigen Von Willebrand Factor A domain of the CMG2 receptor (Santelli et al. Nature, 2004)

33 (modified from Bann and Hultgren, N&V, Nature 2004)

34 Channel forming loop Protective antigen Von Wildebrand domain of the CMG2 receptor (Lacy et al. PNAS, 2004) 1 histidine in CMG 2 implicated in domain II binding Domain II-domain IV interface contains 7 histidines (Santelli et al. Nature, 2004)

35 NalP (Santelli et al. Nature, 2004) (Oomen et al. EMBO, 2004)

36 The protective antigen has to time its entry How does it do it? Acidic ph (Prince, J Clin Invest. 2003)

37 PA heptamers are spatially segregated from monomers Raft like domain Clathrin dependent entry (Abrami et al., J Cell Biol. 2003)

38 Labile molecules that associate in to labile structures: structural aggregates that form functional networks

39 Spatial segregation of PA83 and PA63 Solubilize cells 1% Triton 4 C DRMs L DRM 0% PA83 +PA63 30% Caveolin-1 40% Cell lysat Top Bottom L Density gradient (Abrami et al., J. Cell Biol., 2003)

40 Raft associated (Abrami et al. JCB 2003) No endocytosis Clathrin dependent entry Surface behavior of ATRs is regulated by at least 3 post-translationnal modifications: 1. S-Palmitoylation 2. Ubiquination 3. Phosphorylation

41 What are the signaling events that take place in rafts to induce endocytosis?

42 Interaction between a cargo receptor and clathrin requires adaptor Clathrin adaptors or accessory proteins AP-1 (Adaptor Protein complex 1) AP-2 ß-arrestins 1 & 2 Dab2 Calm/AP180? Epsin/Eps15 Cargos (Golgi) Listeria entry Transferin receptor, LAMP1 GPCRs LDL receptors EGFR, ENaC And adapters need signals to be recruited

43 Molecular players involved in anthrax toxin endocytosis Phosphorylation deficient receptors src P ß-arrestin cbl Ub IP: TEM8-HA AP1 clathrin (Abrami et,pnas 2010, PLoS Patho. 2010)

44 At what location do toxin enter the cytoplasm? (Gruenberg, 2001)

45 Endosomes contain intraluminal vesicles Murk et al., PNAS 2003

46 The unconventional anthrax toxin entry route Also followed by certain viruses One way Early endosomes Back fusion Late endosomes

47 All (almost) AB toxins must cross a membrane This can occur at a variety of intracellular sites which depend on the toxin Diphtheria toxin Exotoxin A Anthrax toxin

Protein Trafficking in the Secretory and Endocytic Pathways

Protein Trafficking in the Secretory and Endocytic Pathways Protein Trafficking in the Secretory and Endocytic Pathways The compartmentalization of eukaryotic cells has considerable functional advantages for the cell, but requires elaborate mechanisms to ensure

More information

Practice Exam 2 MCBII

Practice Exam 2 MCBII 1. Which feature is true for signal sequences and for stop transfer transmembrane domains (4 pts)? A. They are both 20 hydrophobic amino acids long. B. They are both found at the N-terminus of the protein.

More information

Molecular Cell Biology Problem Drill 16: Intracellular Compartment and Protein Sorting

Molecular Cell Biology Problem Drill 16: Intracellular Compartment and Protein Sorting Molecular Cell Biology Problem Drill 16: Intracellular Compartment and Protein Sorting Question No. 1 of 10 Question 1. Which of the following statements about the nucleus is correct? Question #01 A. The

More information

Chapter 6. Antigen Presentation to T lymphocytes

Chapter 6. Antigen Presentation to T lymphocytes Chapter 6 Antigen Presentation to T lymphocytes Generation of T-cell Receptor Ligands T cells only recognize Ags displayed on cell surfaces These Ags may be derived from pathogens that replicate within

More information

Protein sorting (endoplasmic reticulum) Dr. Diala Abu-Hsasan School of Medicine

Protein sorting (endoplasmic reticulum) Dr. Diala Abu-Hsasan School of Medicine Protein sorting (endoplasmic reticulum) Dr. Diala Abu-Hsasan School of Medicine dr.abuhassand@gmail.com An overview of cellular components Endoplasmic reticulum (ER) It is a network of membrane-enclosed

More information

Intracellular Compartments and Protein Sorting

Intracellular Compartments and Protein Sorting Intracellular Compartments and Protein Sorting Intracellular Compartments A eukaryotic cell is elaborately subdivided into functionally distinct, membrane-enclosed compartments. Each compartment, or organelle,

More information

Lysosomes and endocytic pathways 9/27/2012 Phyllis Hanson

Lysosomes and endocytic pathways 9/27/2012 Phyllis Hanson Lysosomes and endocytic pathways 9/27/2012 Phyllis Hanson General principles Properties of lysosomes Delivery of enzymes to lysosomes Endocytic uptake clathrin, others Endocytic pathways recycling vs.

More information

Summary of Endomembrane-system

Summary of Endomembrane-system Summary of Endomembrane-system 1. Endomembrane System: The structural and functional relationship organelles including ER,Golgi complex, lysosome, endosomes, secretory vesicles. 2. Membrane-bound structures

More information

Intracellular vesicular traffic. B. Balen

Intracellular vesicular traffic. B. Balen Intracellular vesicular traffic B. Balen Three types of transport in eukaryotic cells Figure 12-6 Molecular Biology of the Cell ( Garland Science 2008) Endoplasmic reticulum in all eucaryotic cells Endoplasmic

More information

Vesicle Transport. Vesicle pathway: many compartments, interconnected by trafficking routes 3/17/14

Vesicle Transport. Vesicle pathway: many compartments, interconnected by trafficking routes 3/17/14 Vesicle Transport Vesicle Formation Curvature (Self Assembly of Coat complex) Sorting (Sorting Complex formation) Regulation (Sar1/Arf1 GTPases) Fission () Membrane Fusion SNARE combinations Tethers Regulation

More information

endomembrane system internal membranes origins transport of proteins chapter 15 endomembrane system

endomembrane system internal membranes origins transport of proteins chapter 15 endomembrane system endo system chapter 15 internal s endo system functions as a coordinated unit divide cytoplasm into distinct compartments controls exocytosis and endocytosis movement of molecules which cannot pass through

More information

General information. Cell mediated immunity. 455 LSA, Tuesday 11 to noon. Anytime after class.

General information. Cell mediated immunity. 455 LSA, Tuesday 11 to noon. Anytime after class. General information Cell mediated immunity 455 LSA, Tuesday 11 to noon Anytime after class T-cell precursors Thymus Naive T-cells (CD8 or CD4) email: lcoscoy@berkeley.edu edu Use MCB150 as subject line

More information

Cell Quality Control. Peter Takizawa Department of Cell Biology

Cell Quality Control. Peter Takizawa Department of Cell Biology Cell Quality Control Peter Takizawa Department of Cell Biology Cellular quality control reduces production of defective proteins. Cells have many quality control systems to ensure that cell does not build

More information

Molecular Cell Biology - Problem Drill 17: Intracellular Vesicular Traffic

Molecular Cell Biology - Problem Drill 17: Intracellular Vesicular Traffic Molecular Cell Biology - Problem Drill 17: Intracellular Vesicular Traffic Question No. 1 of 10 1. Which of the following statements about clathrin-coated vesicles is correct? Question #1 (A) There are

More information

CELL BIOLOGY - CLUTCH CH INTRACELLULAR PROTEIN TRANSPORT.

CELL BIOLOGY - CLUTCH CH INTRACELLULAR PROTEIN TRANSPORT. !! www.clutchprep.com CONCEPT: MEMBRANE ENCLOSED ORGANELLES Table of eukaryotic organelles and their functions Organelle Function % volume of cell Cytosol Aqueous fluid where metabolic pathways and chemical

More information

Molecular Cell Biology 5068 In class Exam 1 October 2, Please print your name: Instructions:

Molecular Cell Biology 5068 In class Exam 1 October 2, Please print your name: Instructions: Molecular Cell Biology 5068 In class Exam 1 October 2, 2012 Exam Number: Please print your name: Instructions: Please write only on these pages, in the spaces allotted and not on the back. Write your number

More information

Antigen presenting cells

Antigen presenting cells Antigen recognition by T and B cells - T and B cells exhibit fundamental differences in antigen recognition - B cells recognize antigen free in solution (native antigen). - T cells recognize antigen after

More information

Antigen Presentation to T lymphocytes

Antigen Presentation to T lymphocytes Antigen Presentation to T lymphocytes Immunology 441 Lectures 6 & 7 Chapter 6 October 10 & 12, 2016 Jessica Hamerman jhamerman@benaroyaresearch.org Office hours by arrangement Antibodies and T cell receptors

More information

Chapter 13: Vesicular Traffic

Chapter 13: Vesicular Traffic Chapter 13: Vesicular Traffic Know the terminology: ER, Golgi, vesicle, clathrin, COP-I, COP-II, BiP, glycosylation, KDEL, microtubule, SNAREs, dynamin, mannose-6-phosphate, M6P receptor, endocytosis,

More information

Homework Hanson section MCB Course, Fall 2014

Homework Hanson section MCB Course, Fall 2014 Homework Hanson section MCB Course, Fall 2014 (1) Antitrypsin, which inhibits certain proteases, is normally secreted into the bloodstream by liver cells. Antitrypsin is absent from the bloodstream of

More information

Advanced Cell Biology. Lecture 33

Advanced Cell Biology. Lecture 33 Advanced Cell Biology. Lecture 33 Alexey Shipunov Minot State University April 22, 2013 Shipunov (MSU) Advanced Cell Biology. Lecture 33 April 22, 2013 1 / 38 Outline Questions and answers Intracellular

More information

2013 John Wiley & Sons, Inc. All rights reserved. PROTEIN SORTING. Lecture 10 BIOL 266/ Biology Department Concordia University. Dr. S.

2013 John Wiley & Sons, Inc. All rights reserved. PROTEIN SORTING. Lecture 10 BIOL 266/ Biology Department Concordia University. Dr. S. PROTEIN SORTING Lecture 10 BIOL 266/4 2014-15 Dr. S. Azam Biology Department Concordia University Introduction Membranes divide the cytoplasm of eukaryotic cells into distinct compartments. The endomembrane

More information

1. to understand how proteins find their destination in prokaryotic and eukaryotic cells 2. to know how proteins are bio-recycled

1. to understand how proteins find their destination in prokaryotic and eukaryotic cells 2. to know how proteins are bio-recycled Protein Targeting Objectives 1. to understand how proteins find their destination in prokaryotic and eukaryotic cells 2. to know how proteins are bio-recycled As a protein is being synthesized, decisions

More information

Signal Transduction Cascades

Signal Transduction Cascades Signal Transduction Cascades Contents of this page: Kinases & phosphatases Protein Kinase A (camp-dependent protein kinase) G-protein signal cascade Structure of G-proteins Small GTP-binding proteins,

More information

17/01/2017. Protein trafficking between cell compartments. Lecture 3: The cytosol. The mitochondrion - the power plant of the cell

17/01/2017. Protein trafficking between cell compartments. Lecture 3: The cytosol. The mitochondrion - the power plant of the cell ell biology 2017 version 13/1 2017 ote endosome vs lysosome handout Lecture 3: Text book Alberts et al.: hapter 12-14 (Topics covered by the lecture) A lot of reading! Focus on principles ell Biology interactive

More information

The endoplasmic reticulum is a network of folded membranes that form channels through the cytoplasm and sacs called cisternae.

The endoplasmic reticulum is a network of folded membranes that form channels through the cytoplasm and sacs called cisternae. Endoplasmic reticulum (ER) The endoplasmic reticulum is a network of folded membranes that form channels through the cytoplasm and sacs called cisternae. Cisternae serve as channels for the transport of

More information

Molecular Trafficking

Molecular Trafficking SCBM 251 Molecular Trafficking Assoc. Prof. Rutaiwan Tohtong Department of Biochemistry Faculty of Science rutaiwan.toh@mahidol.ac.th Lecture outline 1. What is molecular trafficking? Why is it important?

More information

Glycoprotein Maturation and Quality Control in the Endoplasmic Reticulum Dr. Daniel Hebert

Glycoprotein Maturation and Quality Control in the Endoplasmic Reticulum Dr. Daniel Hebert Glycoprotein Maturation and Quality Control in the Endoplasmic Reticulum Department of Biochemistry and Molecular Biology University of Massachusetts, USA 1 Intracellular protein trafficking Plasma membrane

More information

PROTEIN TRAFFICKING. Dr. SARRAY Sameh, Ph.D

PROTEIN TRAFFICKING. Dr. SARRAY Sameh, Ph.D PROTEIN TRAFFICKING Dr. SARRAY Sameh, Ph.D Overview Proteins are synthesized either on free ribosomes or on ribosomes bound to endoplasmic reticulum (RER). The synthesis of nuclear, mitochondrial and peroxisomal

More information

Lipids and Membranes

Lipids and Membranes Lipids and Membranes Presented by Dr. Mohammad Saadeh The requirements for the Pharmaceutical Biochemistry I Philadelphia University Faculty of pharmacy Membrane transport D. Endocytosis and Exocytosis

More information

Antigen processing and presentation. Monika Raulf

Antigen processing and presentation. Monika Raulf Antigen processing and presentation Monika Raulf Lecture 25.04.2018 What is Antigen presentation? AP is the display of peptide antigens (created via antigen processing) on the cell surface together with

More information

Intracellular Vesicular Traffic Chapter 13, Alberts et al.

Intracellular Vesicular Traffic Chapter 13, Alberts et al. Intracellular Vesicular Traffic Chapter 13, Alberts et al. The endocytic and biosynthetic-secretory pathways The intracellular compartments of the eucaryotic ell involved in the biosynthetic-secretory

More information

Cell Physiology Final Exam Fall 2008

Cell Physiology Final Exam Fall 2008 Cell Physiology Final Exam Fall 2008 Guys, The average on the test was 69.9. Before you start reading the right answers please do me a favor and remember till the end of your life that GLUCOSE TRANSPORT

More information

October 26, Lecture Readings. Vesicular Trafficking, Secretory Pathway, HIV Assembly and Exit from Cell

October 26, Lecture Readings. Vesicular Trafficking, Secretory Pathway, HIV Assembly and Exit from Cell October 26, 2006 Vesicular Trafficking, Secretory Pathway, HIV Assembly and Exit from Cell 1. Secretory pathway a. Formation of coated vesicles b. SNAREs and vesicle targeting 2. Membrane fusion a. SNAREs

More information

Essential Cell Biology

Essential Cell Biology Alberts Bray Hopkin Johnson Lewis Raff Roberts Walter Essential Cell Biology FOURTH EDITION Chapter 15 Intracellular Compartments and Protein Transport Copyright Garland Science 2014 CHAPTER CONTENTS MEMBRANE-ENCLOSED

More information

Intracellular Vesicle Trafficking

Intracellular Vesicle Trafficking Intracellular Vesicle Trafficking Chi-Kuang Yao (IBC, Academia Sinica) 11-6-2017 ckyao@gate.sinica.edu.tw 1 Compartmentalization makes difference between bacteria and yeast 1. More compartments with specific

More information

PHSI3009 Frontiers in Cellular Physiology 2017

PHSI3009 Frontiers in Cellular Physiology 2017 Overview of PHSI3009 L2 Cell membrane and Principles of cell communication L3 Signalling via G protein-coupled receptor L4 Calcium Signalling L5 Signalling via Growth Factors L6 Signalling via small G-protein

More information

Endoplasmic Reticulum

Endoplasmic Reticulum Endoplasmic Reticulum What s ER? How is ER? Why is ER? definition description functions Nissl s bodies neurons Berg s bodies hepatocytes Organelle structure histocytochemical evidences Ergastoplasm pancreatic

More information

Lecture 6 - Intracellular compartments and transport I

Lecture 6 - Intracellular compartments and transport I 01.25.10 Lecture 6 - Intracellular compartments and transport I Intracellular transport and compartments 1. Protein sorting: How proteins get to their appropriate destinations within the cell 2. Vesicular

More information

Endomembrane system 11/1/2018. Endomembrane System. Direct physical continuity. Transfer of membrane segments as vesicles. Outer Nuclear envelope

Endomembrane system 11/1/2018. Endomembrane System. Direct physical continuity. Transfer of membrane segments as vesicles. Outer Nuclear envelope Endomembrane system Endomembrane System Outer Nuclear envelope Direct physical continuity Transfer of membrane segments as vesicles Endoplasmic reticulum BUT membranes are not identical in structure and

More information

The Cell. Copyright 2003 Pearson Education, Inc. publishing as Benjamin Cummings

The Cell. Copyright 2003 Pearson Education, Inc. publishing as Benjamin Cummings The Cell Cell Theory The cell is the basic structural and functional unit of life The organism activity depends on individual and collective activity of cells Biochemical activities of cells are dictated

More information

Posttranslational Modification and Targeting of Proteins

Posttranslational Modification and Targeting of Proteins Posttranslational Modification and Targeting of Proteins Graduate Biochemistry Term 2/2016 Assist. Prof. Dr. Panida Khunkaewla School of Chemistry, Institute of Science Suranaree University of Technology

More information

Zool 3200: Cell Biology Exam 4 Part I 2/3/15

Zool 3200: Cell Biology Exam 4 Part I 2/3/15 Name: Key Trask Zool 3200: Cell Biology Exam 4 Part I 2/3/15 Answer each of the following questions in the space provided, explaining your answers when asked to do so; circle the correct answer or answers

More information

Using Modified Bacterial Toxins To Deliver Vaccine Antigens

Using Modified Bacterial Toxins To Deliver Vaccine Antigens Using Modified Bacterial Toxins To Deliver Vaccine Antigens Researchers are using toxins to deliver epitopes in candidate vaccines that specifically stimulate protective cytotoxic T lymphocyte responses

More information

Lipidne mikrodomene. funkcija

Lipidne mikrodomene. funkcija Lipidne mikrodomene funkcija 1 Cellular processes involving lipid rafts - Signal transduction - Protein and lipid trafficking and sorting - Endosome(clathrin)-independent endocytosis: - potocytosis and

More information

Signal Transduction: Information Metabolism. Chem 454: Regulatory Mechanisms in Biochemistry University of Wisconsin-Eau Claire

Signal Transduction: Information Metabolism. Chem 454: Regulatory Mechanisms in Biochemistry University of Wisconsin-Eau Claire Signal Transduction: Information Metabolism Chem 454: Regulatory Mechanisms in Biochemistry University of Wisconsin-Eau Claire Introduction Information Metabolism How cells receive, process and respond

More information

TRANSPORT PROCESSES. 1b. moving proteins into membranes and organelles

TRANSPORT PROCESSES. 1b. moving proteins into membranes and organelles 1b. moving proteins into membranes and organelles SLIDE 1 A typical mammalian cell contains up to 10,000 different kinds of proteins. The vast majority of these proteins are synthesized by cytosolic ribosomes,

More information

Chapter 31. Completing the Protein Life Cycle: Folding, Processing and Degradation. Biochemistry by Reginald Garrett and Charles Grisham

Chapter 31. Completing the Protein Life Cycle: Folding, Processing and Degradation. Biochemistry by Reginald Garrett and Charles Grisham Chapter 31 Completing the Protein Life Cycle: Folding, Processing and Degradation Biochemistry by Reginald Garrett and Charles Grisham Essential Question How are newly synthesized polypeptide chains transformed

More information

Significance of the MHC

Significance of the MHC CHAPTER 8 Major Histocompatibility Complex (MHC) What is MHC? HLA H-2 Minor histocompatibility antigens Peter Gorer & George Sneell (1940) - MHC molecules were initially discovered during studies aimed

More information

Moving Proteins into Membranes and Organelles

Moving Proteins into Membranes and Organelles 13 Moving Proteins into Membranes and Organelles Review the Concepts 1. In eukaryotes, protein translocation across the endoplasmic reticulum (ER) membrane is most commonly cotranslational; it can also

More information

Chapt. 10 Cell Biology and Biochemistry. The cell: Student Learning Outcomes: Describe basic features of typical human cell

Chapt. 10 Cell Biology and Biochemistry. The cell: Student Learning Outcomes: Describe basic features of typical human cell Chapt. 10 Cell Biology and Biochemistry Cell Chapt. 10 Cell Biology and Biochemistry The cell: Lipid bilayer membrane Student Learning Outcomes: Describe basic features of typical human cell Integral transport

More information

Introduction and protein sorting

Introduction and protein sorting Introduction and protein sorting Membrane proteins Major components of cells Nucleic acids Carbohydrates Proteins Lipids (50% of mass of plasma membranes, 30% of mitochondrial membranes, 80% of myelin

More information

Cells: The Living Units

Cells: The Living Units Chapter 3 Part B Cells: The Living Units Annie Leibovitz/Contact Press Images PowerPoint Lecture Slides prepared by Karen Dunbar Kareiva Ivy Tech Community College 3.4 Active Membrane Transport Two major

More information

The Cell Organelles. Eukaryotic cell. The plasma membrane separates the cell from the environment. Plasma membrane: a cell s boundary

The Cell Organelles. Eukaryotic cell. The plasma membrane separates the cell from the environment. Plasma membrane: a cell s boundary Eukaryotic cell The Cell Organelles Enclosed by plasma membrane Subdivided into membrane bound compartments - organelles One of the organelles is membrane bound nucleus Cytoplasm contains supporting matrix

More information

Lecture Readings. Vesicular Trafficking, Secretory Pathway, HIV Assembly and Exit from Cell

Lecture Readings. Vesicular Trafficking, Secretory Pathway, HIV Assembly and Exit from Cell October 26, 2006 1 Vesicular Trafficking, Secretory Pathway, HIV Assembly and Exit from Cell 1. Secretory pathway a. Formation of coated vesicles b. SNAREs and vesicle targeting 2. Membrane fusion a. SNAREs

More information

BIOL 4374/BCHS 4313 Cell Biology Exam #1 February 13, 2001

BIOL 4374/BCHS 4313 Cell Biology Exam #1 February 13, 2001 BIOL 4374/BCHS 4313 Cell Biology Exam #1 February 13, 2001 SS# Name This exam is worth a total of 100 points. The number of points each question is worth is shown in parentheses. Good luck! 1. (2) The

More information

Sarah Jaar Marah Al-Darawsheh

Sarah Jaar Marah Al-Darawsheh 22 Sarah Jaar Marah Al-Darawsheh Faisal Mohammad Receptors can be membrane proteins (for water-soluble hormones/ligands) or intracellular (found in the cytosol or nucleus and bind to DNA, for lipid-soluble

More information

Membrane associated receptor transfers the information. Second messengers relay information

Membrane associated receptor transfers the information. Second messengers relay information Membrane associated receptor transfers the information Most signals are polar and large Few of the signals are nonpolar Receptors are intrinsic membrane proteins Extracellular and intracellular domains

More information

AP Biology

AP Biology Tour of the Cell (1) 2007-2008 Types of cells Prokaryote bacteria cells - no organelles - organelles Eukaryote animal cells Eukaryote plant cells Cell Size Why organelles? Specialized structures - specialized

More information

Significance of the MHC

Significance of the MHC CHAPTER 8 Major Histocompatibility Complex (MHC) What is is MHC? HLA H-2 Minor histocompatibility antigens Peter Gorer & George Sneell (1940) Significance of the MHC role in immune response role in organ

More information

C) You find that the Raf kinase is not constitutively active. What was necessary in the previous assay to show any Raf kinase activity?

C) You find that the Raf kinase is not constitutively active. What was necessary in the previous assay to show any Raf kinase activity? PROBLEM SET 3 1. You have obtained immortalized liver cells from a patient who died of Wilson s disease, an inherited disorder of copper metabolism marked by neuronal degeneration and hepatic cirrhosis.

More information

Live cell imaging of trafficking of the chaperone complex vaccine to the ER. BMDCs were incubated with ER-Tracker Red (1 M) in staining solution for

Live cell imaging of trafficking of the chaperone complex vaccine to the ER. BMDCs were incubated with ER-Tracker Red (1 M) in staining solution for Live cell imaging of trafficking of the chaperone complex vaccine to the ER. BMDCs were incubated with ER-Tracker Red (1 M) in staining solution for 15 min at 37 C and replaced with fresh complete medium.

More information

Don t Freak Out. Test on cell organelle on Friday!

Don t Freak Out. Test on cell organelle on Friday! Cell Structure 1 Don t Freak Out Test on cell organelle on Friday! This test should be a buffer test and help raise your overall test score. All information will come from this week! 2 Cells Provide Compartments

More information

Lipid raft-a gateway for passing through the cell membrane for pathogens

Lipid raft-a gateway for passing through the cell membrane for pathogens 16 3 2004 6 Chinese Bulletin of Life Sciences Vol. 16, No. 3 Jun., 2004 10040374(2004)03014404 200031 / GPI (GPI) Q241 Q257 R37 A Lipid rafta gateway for passing through the cell membrane for pathogens

More information

AG MHC HLA APC Ii EPR TAP ABC CLIP TCR

AG MHC HLA APC Ii EPR TAP ABC CLIP TCR !! AG MHC HLA APC Ii EPR TAP ABC CLIP TCR Antigen Major Histocompartibility Complex Human Leukocyte Antigen Antigen Presenting Cell Invariant Chain Endoplasmatic Reticulum Transporters Associated with

More information

Lecture: CHAPTER 13 Signal Transduction Pathways

Lecture: CHAPTER 13 Signal Transduction Pathways Lecture: 10 17 2016 CHAPTER 13 Signal Transduction Pathways Chapter 13 Outline Signal transduction cascades have many components in common: 1. Release of a primary message as a response to a physiological

More information

Module 3 Lecture 7 Endocytosis and Exocytosis

Module 3 Lecture 7 Endocytosis and Exocytosis Module 3 Lecture 7 Endocytosis and Exocytosis Endocytosis: Endocytosis is the process by which cells absorb larger molecules and particles from the surrounding by engulfing them. It is used by most of

More information

Endocytosis and Intracellular Trafficking of Notch and Its Ligands

Endocytosis and Intracellular Trafficking of Notch and Its Ligands CHA P T E R F IVE Endocytosis and Intracellular Trafficking of Notch and Its Ligands Shinya Yamamoto, *,1 Wu-Lin Charng, *,1 and Hugo J. Bellen *,,, Contents 1. Notch Signaling and its Regulation by Endocytosis

More information

MCB130 Midterm. GSI s Name:

MCB130 Midterm. GSI s Name: 1. Peroxisomes are small, membrane-enclosed organelles that function in the degradation of fatty acids and in the degradation of H 2 O 2. Peroxisomes are not part of the secretory pathway and peroxisomal

More information

Chapter 2: Exocytosis and endocytosis. Biochimica cellulare parte B 2016/17

Chapter 2: Exocytosis and endocytosis. Biochimica cellulare parte B 2016/17 Chapter 2: Exocytosis and endocytosis Biochimica cellulare parte B 2016/17 Exocytosis and endocytosis Transport from the trans-golgi network to the cell exterior: exocytosis. All eukaryotic cells continuously

More information

Cell Cell

Cell Cell Go to cellsalive.com. Select Interactive Cell Models: Plant and Animal. Fill in the information on Plant and Animal Organelles, then Click on Start the Animation Select Plant or Animal Cell below the box.

More information

I. Fluid Mosaic Model A. Biological membranes are lipid bilayers with associated proteins

I. Fluid Mosaic Model A. Biological membranes are lipid bilayers with associated proteins Lecture 6: Membranes and Cell Transport Biological Membranes I. Fluid Mosaic Model A. Biological membranes are lipid bilayers with associated proteins 1. Characteristics a. Phospholipids form bilayers

More information

Proteasomes. When Death Comes a Knock n. Warren Gallagher Chem412, Spring 2001

Proteasomes. When Death Comes a Knock n. Warren Gallagher Chem412, Spring 2001 Proteasomes When Death Comes a Knock n Warren Gallagher Chem412, Spring 2001 I. Introduction Introduction The central dogma Genetic information is used to make proteins. DNA RNA Proteins Proteins are the

More information

Effects of Second Messengers

Effects of Second Messengers Effects of Second Messengers Inositol trisphosphate Diacylglycerol Opens Calcium Channels Binding to IP 3 -gated Channel Cooperative binding Activates Protein Kinase C is required Phosphorylation of many

More information

Cell Biology from an Immune Perspective

Cell Biology from an Immune Perspective Harvard-MIT Division of Health Sciences and Technology HST.176: Cellular and Molecular Immunology Course Director: Dr. Shiv Pillai Cell Biology from an Immune Perspective In this lecture we will very briefly

More information

Molecular Cell Biology 5068 In Class Exam 1 September 29, Please print your name:

Molecular Cell Biology 5068 In Class Exam 1 September 29, Please print your name: Molecular Cell Biology 5068 In Class Exam 1 September 29, 2015 Exam Number: Please print your name: Instructions: Please write only on these pages, in the spaces allotted and not on the back. Write your

More information

REGULATION OF ENZYME ACTIVITY. Medical Biochemistry, Lecture 25

REGULATION OF ENZYME ACTIVITY. Medical Biochemistry, Lecture 25 REGULATION OF ENZYME ACTIVITY Medical Biochemistry, Lecture 25 Lecture 25, Outline General properties of enzyme regulation Regulation of enzyme concentrations Allosteric enzymes and feedback inhibition

More information

Chapter 9. Cellular Signaling

Chapter 9. Cellular Signaling Chapter 9 Cellular Signaling Cellular Messaging Page 215 Cells can signal to each other and interpret the signals they receive from other cells and the environment Signals are most often chemicals The

More information

Signal Transduction: G-Protein Coupled Receptors

Signal Transduction: G-Protein Coupled Receptors Signal Transduction: G-Protein Coupled Receptors Federle, M. (2017). Lectures 4-5: Signal Transduction parts 1&2: nuclear receptors and GPCRs. Lecture presented at PHAR 423 Lecture in UIC College of Pharmacy,

More information

Summary and Discussion antigen presentation

Summary and Discussion antigen presentation Summary and Discussion antigen presentation 247 248 Summary & Discussion Summary and discussion: antigen presentation For a cell to communicate information about its internal health and status to the immune

More information

Principles of cell signaling Lecture 4

Principles of cell signaling Lecture 4 Principles of cell signaling Lecture 4 Johan Lennartsson Molecular Cell Biology (1BG320), 2014 Johan.Lennartsson@licr.uu.se 1 Receptor tyrosine kinase-induced signal transduction Erk MAP kinase pathway

More information

Structure & Function of Cells

Structure & Function of Cells Anatomy & Physiology 101-805 Unit 4 Structure & Function of Cells Paul Anderson 2011 Anatomy of a Generalised Cell Attached or bound ribosomes Cilia Cytosol Centriole Mitochondrion Rough endoplasmic reticulum

More information

Basic Immunology. Lecture 5 th and 6 th Recognition by MHC. Antigen presentation and MHC restriction

Basic Immunology. Lecture 5 th and 6 th Recognition by MHC. Antigen presentation and MHC restriction Basic Immunology Lecture 5 th and 6 th Recognition by MHC. Antigen presentation and MHC restriction Molecular structure of MHC, subclasses, genetics, functions. Antigen presentation and MHC restriction.

More information

The Microscopic World of Cells. The Microscopic World of Cells. The Microscopic World of Cells 9/21/2012

The Microscopic World of Cells. The Microscopic World of Cells. The Microscopic World of Cells 9/21/2012 Organisms are either: Single-celled, such as most prokaryotes and protists or Multicelled, such as plants, animals, and most fungi How do we study cells? Light microscopes can be used to explore the structures

More information

BIOLOGY. Cell Communication CAMPBELL. Reece Urry Cain Wasserman Minorsky Jackson. Lecture Presentation by Nicole Tunbridge and Kathleen Fitzpatrick

BIOLOGY. Cell Communication CAMPBELL. Reece Urry Cain Wasserman Minorsky Jackson. Lecture Presentation by Nicole Tunbridge and Kathleen Fitzpatrick CAMPBELL BIOLOGY TENTH EDITION Reece Urry Cain Wasserman Minorsky Jackson 11 Cell Communication Lecture Presentation by Nicole Tunbridge and Kathleen Fitzpatrick Cellular Messaging Cells can signal to

More information

The Cell and Cellular transport

The Cell and Cellular transport Cell theory (1838): The Cell 1. All organisms are composed of one or more cells, and the life processes of metabolism and heredity occur within these cells. 2. Cells are the smallest living things, the

More information

I. Membrane Proteins II. Intracellular Compartments III. Protein Translocation

I. Membrane Proteins II. Intracellular Compartments III. Protein Translocation Lecture 3 I. Membrane Proteins II. Intracellular Compartments III. Protein Translocation Ref: MBoC (5th Edition), Alberts Johnson Lewis Raff Roberts Walter Chapter 10 Membrane Structure Chapter 12 Intracellular

More information

Lysosomes, Peroxisomes and Centrioles. Hüseyin Çağsın

Lysosomes, Peroxisomes and Centrioles. Hüseyin Çağsın Lysosomes, Peroxisomes and Centrioles Hüseyin Çağsın Lysosomes Outline Endosomes Molecule transport to the lysosomes Endocytosis Exocytosis Autophagy Vacuoles Peroxisomes Centrioles Lysosomes Lysosomes

More information

Organization of ATPases

Organization of ATPases The Primary Active Transporter II: The ATPase Objectives: Organization P type with NPA domains Proton pumps of the rotary V type ATPase 1 Organization of P type, solute transport, found in plasma membranes

More information

BEH.462/3.962J Molecular Principles of Biomaterials Spring 2003

BEH.462/3.962J Molecular Principles of Biomaterials Spring 2003 Lecture 16: Intracellular drug delivery Last time: Today: nano- and micro-particle drug carriers Delivery to tissues from systemic circulation Intracellular drug delivery Reading: A.S. Hoffman et al.,

More information

1. endoplasmic reticulum This is the location where N-linked oligosaccharide is initially synthesized and attached to glycoproteins.

1. endoplasmic reticulum This is the location where N-linked oligosaccharide is initially synthesized and attached to glycoproteins. Biology 4410 Name Spring 2006 Exam 2 A. Multiple Choice, 2 pt each Pick the best choice from the list of choices, and write it in the space provided. Some choices may be used more than once, and other

More information

CELL BIOLOGY - CLUTCH CH THE IMMUNE SYSTEM.

CELL BIOLOGY - CLUTCH CH THE IMMUNE SYSTEM. !! www.clutchprep.com CONCEPT: OVERVIEW OF HOST DEFENSES The human body contains three lines of against infectious agents (pathogens) 1. Mechanical and chemical boundaries (part of the innate immune system)

More information

A Tour of the Cell. Chapter 6. Biology Eighth Edition Neil Campbell and Jane Reece. PowerPoint Lecture Presentations for

A Tour of the Cell. Chapter 6. Biology Eighth Edition Neil Campbell and Jane Reece. PowerPoint Lecture Presentations for Chapter 6 A Tour of the Cell PowerPoint Lecture Presentations for Biology Eighth Edition Neil Campbell and Jane Reece Lectures by Chris Romero, updated by Erin Barley with contributions from Joan Sharp

More information

Cell morphology. Cell organelles structure and function. Chapter 1: UNIT 1. Dr. Charushila Rukadikar

Cell morphology. Cell organelles structure and function. Chapter 1: UNIT 1. Dr. Charushila Rukadikar UNIT 1 Cell morphology Cell organelles structure and function Chapter 1: Dr. Charushila Rukadikar Assistant Professor Department Of Physiology ZMCH, Dahod Physiology The science that is concerned with

More information

SHORT LINEAR MOTIFS. Holger Dinkel EMBO Practical Course Computational analysis of protein-protein interactions From sequences to networks

SHORT LINEAR MOTIFS. Holger Dinkel EMBO Practical Course Computational analysis of protein-protein interactions From sequences to networks Holger Dinkel EMBO Practical Course Computational analysis of protein-protein interactions From sequences to networks IMPORTANCE OF 2 / 19 IMPORTANCE OF 2 / 19 IMPORTANCE OF 2 / 19 IMPORTANCE OF 2 / 19

More information

Dr. Ahmed K. Ali Attachment and entry of viruses into cells

Dr. Ahmed K. Ali Attachment and entry of viruses into cells Lec. 6 Dr. Ahmed K. Ali Attachment and entry of viruses into cells The aim of a virus is to replicate itself, and in order to achieve this aim it needs to enter a host cell, make copies of itself and

More information

Cell Physiology Final Exam Fall 2009

Cell Physiology Final Exam Fall 2009 Cell Physiology Final Exam Fall 2009 1. I am sure that most of you are stressing now. Your heart rate is higher than normal, your breathing faster and your senses more acute. What phase of stress response

More information

Early scientists who observed cells made detailed sketches of what they saw.

Early scientists who observed cells made detailed sketches of what they saw. Early scientists who observed cells made detailed sketches of what they saw. Early scientists who observed cells made detailed sketches of what they saw. CORK Early scientists who observed cells made detailed

More information

Renáta Schipp Gergely Berta Department of Medical Biology

Renáta Schipp Gergely Berta Department of Medical Biology The cell III. Renáta Schipp Gergely Berta Department of Medical Biology Size and Biology Biology is a visually rich subject many of the biological events and structures are smaller than the unaided human

More information

Cellular Biochemistry

Cellular Biochemistry Cellular Biochemistry Fall Semester 2013 Sept. 23 Benoit Kornmann Institute of Biochemistry Introduction to biological membranes General functions and properties Membrane lipids Physical properties Distribution/asymmetry

More information