TRIPath FEE Schedule

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1 TRIPath FEE Schedule (Effective 1/1/2018) CONSULTATIONS & START-UP FEES Project Service Fee UW Client Non-UW Client General Project Set-Up Fee* $75.00 $ IHC single stain projects incur a per antibody fee $10.00/antibody $15.00/antibody IHC multiplex projects incur a per antibody fee $56.00/antibody $75.00/antibody ISH Project Set-Up Fee $ $ Clinical Trials Set-Up Fee $ $ *Changes in project scope or direction may trigger additional labor fees at $56.00/hour TRIP staff is available for project consults and for general troubleshooting of histology, molecular, and immunohistochemistry related concerns. Consultations lasting over 15 minutes will be invoiced at $56.00/hour Pathology consults can be arranged at $100.00/hour CONTENTS Histology Services: p. 2 TMA Creation and Control Tissues p. 3 Immunohistochemistry/ In Situ Hybridization p. 3 Molecular Services: p. 4 Imaging Services: p. 5 Fee-For-Use Equipment: p. 6 Control Tissue Slides Available: p.7-8 1

2 HISTOLOGY SERVICES Services UWCCC/ ICTR grants UW- Madison Process & Embed $ % if manual processing $ % if manual processing Re-embed $3.80 $4.75 Paraffin Sectioning $1.20 First slide/block, $1.00 ea. add'l,+20% custom sectioning $1.50 first slide/block, $1.25 ea. add'l, +20% custom sectioning Frozen Sectioning $2.60 First slide/block, $1.00 ea. add'l,+20% for custom sectioning $3.25 First slide/block, $1.25 ea. add'l, +20% for custom sectioning RNase-free Technique $13.00 $16.25 Tissue Decalcify $2.20 $2.75 Frozen Tissue Prep (per sample) $14.60 $18.25 Re-coverslip $3.20 $4.00 H&E Stain - Paraffin (stain only) $6.80 $8.50 H&E Stain - Frozen (stain only) $4.00 $5.00 Special Stain I (See table below) $7.60 $9.50 Special Stain II (See table below) $12.40 $15.50 Special Stain III (See table below) $16.20 $20.25 Slide Carrier: 2X, 5X, 25X, 100X $0.50 $1.00 $5.25 $9.25 $0.50 $1.00 $5.25 $9.25 Retrieve/return/store blocks & slides $1.00/block $1.00/block Special Stain I Special Stain II Special Stain III Alcian Blue ph 2.5 PAS GMS Elastic Gram Lester King/Bielchowsky TolBlu Mast Cell Gomori s Trichrome Reticulin PBR Masson s Trichrome Cresyl Violet Picrosirius Red Weil Myelin Ziehl-Nielsen/AFB LFB For any stain not listed, contact TRIP for feasibility and pricing. 2

3 TMA CREATION AND CONTROL TISSUE Services UWCCC/ ICTR grants UW- Madison Tissue Microarray (TMA) Creation Price includes 1 H&E slide and 40X Aperio slide scanning for the first block $ Set up first block per project, $60.00 per add'l block $ Set up first block per project, $75.00 per add'l block TMA Core Punches for TMA Creation $6.00 each $7.50 each Tissue Microarray Sections (TSB Inventory): Breast cancer; Colorectal and anal cancer; Head and neck cancer; Lung cancer; Ovarian cancer; Pancreatic cancer and Thyroid cancer For more information please go to: y-requests/ Retrieve/return/store blocks & slides $1.00/block $1.00/block Unstained Control Tissue per section (For tissue types, see Table on pages 7-8) $5.60 $7.00 Unstained Control Tissue Microarray See table below See table below IMMUNOHISTOCHEMISTRY (IHC)/IN SITU HYBRIDIZATION (ISH) Services UWCCC/ ICTR grants UW- Madison IHC automated- standard $32.60/slide $40.75/slide IHC automated- enhanced/ alternate detection $39.80/slide $49.75/slide Multiplex IHC automated- each additional antibody $27.60/slide $34.50/slide IHC manual- standard $28.40/slide $35.50/slide Multiplex IHC manual- each additional antibody $15.00/slide $18.75/slide ISH Project Dependent Project Dependent Retrieve/return/store blocks & slides $1.00/block $1.00/block Unstained Control Tissue per section $5.60 $7.00 Unstained Control Tissue custom per section $8.00 $10.00 Unstained Control Tissue Microarray See table below See table below IHC and ISH do not include primary antibody or probe. Ability to perform automated Vs. manual IHC is project dependent. Additional costs will be invoiced for projects requiring non-standard reagents. TRIP Control TMAs UWCCC/ ICTR grants UW- Madison Unstained Control TMA - TRIP A $8.00/slide $10.00/slide Unstained Control TMA - TRIP B $20.00/slide $25.00/slide Unstained Control TMA - TRIP C $32.00/slide $40.00/slide 3

4 MOLECULAR SERVICES Services UWCCC/ ICTR grants UW- Madison Real time qpcr and RT-qPCR (1-Step) Labor, Ancillary materials & reagents $76.60/run $95.75/run Kit & Primers Custom budget estimate Custom budget estimate Real time RT-qPCR (2-Step) Labor, Ancillary materials & reagents $107.00/run $133.75/run Kit & Primers Custom budget estimate Custom budget estimate *DNA from FFPE Samples on Maxwell (Tissue collection at additional charge) $9.40/sample $11.75/sample *RNA from FFPE Samples on Maxwell (Tissue collection at additional charge) $16.80/sample $21.00/sample *For fresh tissue extractions contact TRIP Lab Short Tandem Repeat Analysis- cultured human cell lines(min. 2 million pelleted cells) $108.00/sample $135.00/sample Short Tandem Repeat Analysis- extracted human DNA samples (min. 10ng/µl and min. vol. 10µl) $100.00/sample $125.00/sample Sequencing, Bidirectional DNA $28.00/PCR product $35.00/PCR product Agarose Gel Electrophoresis $20.00/gel $25.00/gel DNase-free treatment for RT-PCR $2.00/reaction $2.50/reaction Tissue collection See table below See table below Retrieve/return/store blocks & slides $1.00/block $1.00/block Additional charges will be applied for the use of additional materials Tissue Collection Services UWCCC/ ICTR grants UW- Madison FFPE Sections/Curls $3.40 $4.00 Biopsy Punch per block $4.80 $6.00 Macrodissections (3 slides/case) $9.20 $11.50 Microcentrifuge Tube Storage Box $3.25 $3.25 4

5 IMAGING SERVICES Imaging System: UWCCC/ ICTR grants UW- Madison Vectra Spectral Scope System Time - TRIP $80.00/hour $100.00/hour Vectra Spectral Scope System Labor - TRIP $56.00/hour $56.00/hour Nuance Scope System/Analysis usage $22.40/hour $28.00/hour Nuance Scope Imaging/Analysis Labor- TRIP $56.00/hour $56.00/hour Aperio whole slide scan 20X (performed by IT) $6.20/slide $7.75/slide Aperio whole slide scan 40X (performed by IT) $15.40/slide $19.25/slide Image and Data Analysis: UWCCC/ ICTR grants UW- Madison InForm/Nuance software station (self-service) $22.40/hour $28.00/hour Training/assistance provided by pathologist $100.00/hour $100.00/hour Training/assistance provided by TRIP $56.00/hour $56.00/hour 5

6 FEE-FOR-USE EQUIPMENT & SOFTWARE Equipment Usage: Unless otherwise noted, user provides reagents and consumables Training will only be done by TRIP personnel at $56.00 per hour Fee-for-use Equipment/Software Models and/or Room UWCCC/ ICTR grants UW- Madison Components Histology Cryostat Leica CM1850 L2/2214 $20.00/hour $25.00/hour ISH Hybridization System ACD HybEZ L2/2214 $10.00/usage $12.50/usage Hybridization Incubator 310 L2/2062 $8.00/usage $10.00/usage Molecular DNA Speed Vac DNA120 L2/2062 $4.00/usage $5.00/usage Eppendorf mastercycler (3) 5345 L2/2062 $8.00/usage $10.00/usage Gel boxes & Power Sources various (Agarose and TBE provided) L2/2062 $6.00/gel $7.50/gel Nanodrop Spectophotometer ND-1000 L2/2062 $4.00/ usage $5.00/ usage Roche LightCycler - real time PCR 2.0 L2/2062 $8.00/usage $10.00/usage Sorvall Centrifuge RC-5C Plus L2/2062 $4.00/usage $5.00/usage Cytospin Centrifuge Shandon L2/2214 $8.00/usage $10.00/usage Imaging Nuance Spectral Scope System* Olympus Scope Nuance L2/2214A $22.40/hour $28.00/hour Imaging Software Station* inform/nuance software L2/2214A $22.40/hour $28.00/hour * Equipment may be reserved by online system through your wisc.edu account calendar. Contact TRIP on how to add the equipment rental calendars to your account. All other listed equipment may be reserved by contacting the TRIP Lab - 6

7 LIST OF AVAILABLE CONTROL TISSUE: Human Tissue # Cases Types of Tissue Adrenal 7 Normal, adenoma, pheochromocytoma Aorta 1 Aneurysm, atherosclerosis Angiosarcoma High grade sarcoma, Appendix 2 Normal, inflamed, appendicitis Bladder 6 Tcc invasive, tcc focal, benign B-cell lymphoma 2 Bowel (See Intestine) Bone 1 Normal bone Brain 2 Autopsy (cerebellum, hippocampus, spinal cord) and Glioma(astrocytoma-high grade) Breast 28 Benign, normal, cyst, fibro-adipose tissue, Ductal CA, DCIS, lobular, invasive lobular, invasive ductal Cardiac 2 Cervix 1 Normal Chondrosarcoma 1 Colon 5 Carcinoma(2) colitis(2)benign(1) DU145 cells 3 EBER (+) 1 EBV+ 1 Endometrium 5 Carcinoma, stromal sarcoma, adenomyosis GIST 1 GI stromal tumor Jejunum 1 Normal Kidney 14 RCC cystic, Benign, RCC Clear, mixed RCC Chromophobe, met chondrosarcoma, tve3+, normal Leiomyoma 1 Liver 20 Normal, epithiod hemangioendothelioma, metastatic colon cancer, mild steatohepatitis; Benign w/ Chronic Hepatitis, Heptocellular Ca. Lymph node 9 Carcinoma, squamous carcinoma, normal, HD, non-hd, Met. Bladder adeno Lymphoma-B-cell 2 Lymphoma Lymphoma-Large cell 1 Lymphoma 7

8 Lung 9 Normal, CA LIST OF AVAILABLE CONTROL TISSUE (Continued): Human Tissue # Cases Types of Tissue MCL 1 Mantle cell lymphoma-spleen Melanoma 3 Metastatic Muscle 1 Normal skeletal Mucinous carcinoma 1 Mucinous carcinoma Nasal Polyp 1 Neuroendocrine Neuroendocrine cancer cancer Omentum 1 Normal Ovary 15 Normal & ovarian carcinoma Pancreas 5 Normal, carcinoma, mixture Placenta 4 Normal Prostate 13 BPT, PCA GS 3+3, HGPIN, Hypoplasia, PCA sv+ GS 3/4, Carcinoma Sarcoma 2 High grade, low grade fibromyxoid sarcoma Skin 9 Mild Chronic Inflammation, Normal, w/ nevus Small bowel 2 Normal & Met melanoma Squamous cell 2 From tonsil and lymph node carcinoma Spinal cord 1 Spleen 8 Mantle cell lymphoma and normal Stomach 2 Benign, focus of stomach Tendon 1 Some skeletal muscle present Testes 1 Lymphoma Thymoma 1 Thymus 1 Benign thyroid tumor Thyroid 17 Wide variety Tongue 1 Normal, scc Tonsil 15 "Normal" Uterus/uterine wall 15 Normal, carcinoma, benign, leiomyoma Vascular tissue 1 Atherosclerosis, synovium Vulva 1 8

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