Net synaptic potentiation in wakefulness and depression in sleep

Size: px
Start display at page:

Download "Net synaptic potentiation in wakefulness and depression in sleep"

Transcription

1 Supplementary Figure 1. Features of the LFP response. a. Amplitude and latency of the evoked response (mean ± SEM, n = 7 rats) plotted as a function of linearly-increasing stimulus intensity (5 intensities, determined for each rat from near-threshold up to near-maximal level). The amplitude increases as a function of increasing stimulus intensity, while the latency remains constant. b. Left panel: a representative example of the LFPs evoked by consecutive stimuli delivered every 10 ms (100 Hz; thick vertical bars; different rat from that shown in Figure 2b). Note that each stimulus consistently results in a negative deflection of the signal. Right panel: mean values of the amplitude of the 10 consecutive evoked responses during the 100 Hz stimulation ( ± SEM, n = 6 rats). Note that the amplitude of the response does not show any depression during the stimulation. c. Individual representative evoked responses taken from one rat after low intensity (above threshold, black) and high intensity (near-maximal, grey) stimulation. The left traces depict the early component, which is present in both conditions. The right traces show the emergence, after the high intensity stimulation, of a polysynaptic component with long latency and long duration. d. Left panel: Individual LFPs evoked by paired stimuli delivered with an interval of 10 ms. Middle and right panels: mean values of the amplitude and slope of the response evoked by the first and the second pulse. Note the augmentation of the response after the second pulse ( ± SEM, n = 7 rats). Asterisks denote significant differences (p < 0.05, paired t-test).

2 Supplementary Figure 2. LFP slope distributions after W, S, and EW. a. Upper panel, mean values of the slope of the evoked responses as in Figure 2d. Lower panel, distribution of the slope of the individual evoked responses before and after a consolidated waking episode of ~ 4 hours (W0 and W1 are as in Fig. 2c). The number of responses was computed for 6 bins with linearly increasing slope. Mean values ( ± SEM, n = 13 rats) are plotted as percentage of the total number of responses within the corresponding session. b. Upper panel, mean values of the slope of the evoked responses as in Figure 2d. Lower panel, distribution of the slope of the individual evoked responses before and after a consolidated sleep period of ~ 4 hours (S0 and S1 are as in Fig. 2d). Mean values ( ± SEM, n = 13 rats). c. Upper panel, mean values of the slope of the evoked responses as in Figure 5b. Lower panel, distribution of the slope of the individual evoked responses after 4 hours of sleep or after 4 hours of enforced wakefulness (EW; S and EW are as in Fig. 5b). Mean values ( ± SEM, n = 13 rats). p<0.05, paired t-test.

3 Supplementary Figure 3. LFP slope changes equated for response amplitude/latency. a. Upper panel, mean values of the slope of the evoked responses in W0 and W1 as in Figure 2c. Middle and lower panels, mean difference ( ± SEM, n = 13 rats) between the slopes of evoked responses that were matched based on their amplitude or their latency, respectively. b. Upper panel, mean values of the slope of the evoked responses in S0 and S1 as in Figure 2d. Middle and lower panels, mean difference ( ± SEM, n = 13 rats) between the slopes of evoked responses that were matched based on their amplitude or their latency, respectively. c. Upper panel, mean values of the slope of the evoked responses in S and EW as in Figure 5b. Middle and lower panels, mean difference ( ± SEM, n = 13 rats) between the slopes of evoked responses that were matched based on their amplitude or their latency, respectively. Asterisks denote significant differences (p < 0.05, paired t-test).

4 Supplementary Figure 4. LFP slope changes and preceding REM sleep. Relationship between the slopes of evoked responses and the amount of REM sleep (left panel) or the REM / NREM sleep ratio (right panel) during the preceding 3-hour period (n = 26 rats). Each rat contributed with 3 (n = 23) or 2 (n = 3) values of the light period (0, 4 and 8 h). The slopes for each time point are expressed as % of the mean value between all the time points within an individual. The lines depict a linear regression (Pearson correlation).

5 Supplementary Figure 5. LFP slope and brain temperature. Top panels. Time course of the changes in LFP slope (left) and brain temperature (right) during a continuous 4-hour waking period. Mean values ( ± SEM; n = rats) of the slope of evoked responses are shown for hour 0 (starting min after arousal, see Methods), and the following 0.5, 1, 2 and 3-4 hours of wakefulness. Mean values ( ± SEM; n = 7 rats) of brain temperature are shown for hour 0 (starting min after arousal, as for the evoked responses), and the following 4 hours of wakefulness. Values are expressed as the difference from the mean 2-min value calculated during sleep immediately before each rat woke up (determined by LFPs and EMG recordings). Brain temperature is plotted in consecutive 10- min intervals during the 4-hour waking period. Horizontal lines depict linear regressions (least square method). Corresponding r2- and p-values are provided within each panel. Bottom panel. Dissociation between the time course of the LFP slopes during the 4 hours of wakefulness and brain temperature. The individual values of the slopes of the LFPs recorded after 0.5, 1, 2 and 3-4 hours of wakefulness (as depicted on the top left panel; % of hour 0) are plotted against brain temperature values during the corresponding 10-min intervals (as in the top right panel). Pearson product-moment correlation coefficient r = 0.03, n.s.

6 Supplementary Figure 6. Relationship between the slope of evoked responses at light onset after 12 hours of continuous waking during the dark period and SWA in the subsequent NREM sleep. In 5 rats baseline evoked responses were collected every 4 hours during the light period. Animals were then constantly observed during the 12-hour dark period and presented with novel objects whenever they exhibited signs of drowsiness. After evoked responses were recorded at the end of the 12-hour waking period, the animals were allowed to obtain undisturbed sleep for ~ 4 hours. At the end of the 12-hour period of waking slopes were 15.8 ± 3.7% above the mean over the baseline light period (average of 0, 4, 8 and 12 h), when the animals predominantly slept (p = 0.014, paired t-test). Left panel. Relationship between mean SWA of the first hour of recovery NREM sleep after the 12-hour waking period (as % of mean SWA in NREM sleep during the first 4 hours of baseline light period) and the slope of evoked responses recorded at the end of the 12- hour waking period before recovery sleep (expressed as % of the slopes obtained at hour 8 of baseline light period, when sleep pressure was at the lowest level). Right panel. Peak SWA (maximal 10-min value reached during the first hour of recovery NREM sleep) after the 12-hour waking period (as % of mean SWA in NREM sleep during the first 4 hours of baseline light period). Slopes are as in the left panel.

7 Supplementary Figure 7. Relationship between the decline of the slope of evoked responses and amount of REM sleep (in min, left panel), and theta power (6-9 Hz) during REM sleep in the corresponding 4- hour interval (S0-S1, circles, n = 23 rats; EW-R, triangles, n = 13 rats). The line depicts a linear regression (Pearson correlation).

8 SUPPLEMENTARY METHODS Surgery and chronic recording of sleep and wakefulness Male WKY rats (Harlan, week old at time of surgery) were used. Under deep isoflurane anesthesia (1.5-2% volume), rats used in electrophysiological experiments were implanted in the frontal cortex (B: mm, L: 2-3 mm) with bipolar concentric local field potential (LFP) electrodes (outer electrode: length: 1.5 mm, diameter: 0.8 mm; inner electrode projection: 1 mm, diameter: 0.28 mm; PlasticsOne, Inc) for stimulation and chronic electroencephalographic (EEG) recordings. Electrodes were fixed to the skull with dental cement. Two stainless steel wires (diameter 0.4 mm) inserted into the neck muscles served to record the electromyogram (EMG). In rats used for molecular studies, to avoid damage to the left cortical hemisphere (used to prepare synaptoneurosome preparations, see below), the EEG was recorded using epidural screw electrodes implanted over the right parietal and occipital cortex, and cerebellum (reference electrode). After surgery all rats were housed individually in transparent Plexiglas cages (36.5 x 25 x 46 cm), and kept in sound-proof recording boxes for the duration of the experiment. Lighting and temperature were kept constant (LD 12:12, lights on at 10 am, 23 ± 1 C; food and water were available ad libitum and replaced daily at 10 am). Seven-ten days were allowed for recovery after surgery, and experiments were started only after the sleep/waking cycle had fully normalized. The rats were connected by means of a flexible cable to a commutator (Airflyte, Bayonne, NJ) and recorded continuously for 2-4 weeks using a Grass electroencephalograph (mod. 15LT, Astro-Med. Inc., West Warwick, RI). Video recordings were performed continuously with infrared cameras (OptiView Technologies, Inc) and stored in real time (AVerMedia Technologies, Inc). EEG (screw or LFP electrodes) and EMG signals were amplified (amplification factor 2000), and filtered [attenuation 50 % amplitude ( - 6 db)] as follows: EEG: high-pass filter at 0.1 Hz; low-pass filter at 30 Hz; EMG: high-pass filter at 10 Hz; low-pass filter at 100 Hz. All signals were sampled and stored at 128 Hz resolution. EEG power spectra were computed by a Fast Fourier Transform (FFT) routine for 4-s epochs (0.25 Hz resolution). Sleep stages were scored off-line by visual inspection of 4-s epochs (SleepSign, Kissei). Wakefulness was characterized by a low-voltage, high-frequency EEG pattern and phasic EMG-activity. Non-rapid eye movement (NREM) sleep was characterized by the occurrence of high-amplitude slow waves, spindles and low tonic EMG activity. During REM sleep, instead, the EEG was similar to that during waking, but only heart beats and occasional twitches were evident in the EMG signal. Epochs containing artifacts, predominantly during active waking, were excluded from spectral analysis. Vigilance state could always be determined. All animal procedures followed the National Institutes of Health Guide for the Care and Use of Laboratory Animals and facilities were reviewed and approved by the IACUC of the University of Wisconsin-Madison, and were inspected and accredited by AAALAC. Enforced wakefulness (EW) Each day from 10 to 10:30 am all rats were gently handled and exposed to a new object to become familiar with the EW procedure (these objects were not reused during EW). Novel objects included nesting and bedding material from other rat cages, wooden blocks, small rubber balls, plastic, metallic, wooden, or paper boxes and tubes of different shape and color. The boxes often had holes through which the rat could reach for a palatable food pellet or a paper towel. During the EW experiment, a new object was introduced into the cage whenever the rat appeared drowsy and slow waves became apparent on the EEG. The rats were never disturbed when they were spontaneously awake, feeding or drinking.

9 Data analysis and statistics The software package MATLAB (The Math Works, Inc., Natick, MA, USA) was used for signal and data analysis and statistics. Differences were tested with one-way ANOVAs and paired t- tests. The relationship between the changes in LFPs slopes, brain temperature and sleep variables was determined by Pearson linear correlations. Molecular studies Animals Three groups of rats were used. Sleeping rats (S) were sacrificed during the light hours (around 4pm) at the end of a long period of sleep (at least 45 min, interrupted by periods of waking no longer than 2 min) after spending at least 75% of the previous 6 hours asleep. Spontaneously awake rats (W) were sacrificed during the dark phase (around 4am) after a long period of continuous waking (1 hour, interrupted by periods of sleep not longer than 4 min), and after spending at least 75 % of the previous 6 hours awake. Rats subjected to enforced wakefulness (EW) were sacrificed during the light period at the same time of day as S rats (around 4pm) after 6 hours of EW. Rats were deeply anesthetized with isoflurane (within 1 min) and decapitated. The head was cooled in liquid nitrogen and the whole brain was removed. Left and right cerebral cortex, left and right hippocampus, and cerebellum were dissected, while the rest of the brain was left intact. Samples were immediately frozen on dry ice and stored at - 80ºC. Synaptoneurosome preparation This protocol was optimized according to suggestions from Dr. Mark F. Bear and his laboratory, and is essentially as described in 10. Cortical samples (entire left hemisphere) were homogenized in ice-cold homogenization buffer (10 mm Hepes (Sigma) / 1.0 mm EDTA (Promega) / 2.0 mm EGTA (Fisher Scientific, Ithasca, IL)/0.5 mm DTT (Invitrogen) / 0.1 mm PMSF (Fluka) / 10 mg/l leupeptin (Sigma) / 50 mg/l soybean trypsin inhibitor (Roche) / 100 nm microcystin (Alexis) using a glass/glass tissue homogenizer (Kontes). A fraction ( ~ 10%) of the homogenate from each sample was boiled in 10% SDS for 10 min and stored unprocessed at - 80 C. The other fraction of the homogenate was passed through two 105-μm-pore nylon mesh filters (Small Parts Inc.), then through a 5-μm-pore filter (Millipore), and centrifuged at 1000 x g for 10 min at 4 C. Pellets were resuspended in boiling 1% SDS, boiled for 10 min and stored at 80 C. Protein concentration was determined by the bicinchonic acid assay (BCA, Pierce). Quantitative immunoblotting The protocol was essentially as described in 10, except that a within-lane IgY signal, instead than a within-lane actin signal, was used as loading control. This is because anti-actin antibodies do not distinguish between polymeric F-actin and monomeric G-actin, and it has been shown that protein levels of F-actin increase in the dendritic regions (spines) where synaptic potentiation has occurred. After protein concentration was determined by BCA, equal amounts (10 μg) of synaptoneurosomes from each animal were first separated by Tris-HCl gel electrophoresis (Bio- Rad) in 1X Tris / Glycine/SDS Buffer (BioRad), transferred to 0.45 μm pore size nitrocellulose membranes (BioRad) in 1X Tris base / Glycine / Methanol blotting buffer, and immunoblotted with anti-psd-95 (1 : 250, BD Biosciences Pharmingen) and / or anti-tubulin (1 : 1000, Chemicon) antibodies to confirm the enrichment for synaptic proteins in synaptoneurosomes (Fig. 1a). Afterwards, equal amounts of synaptoneurosomes from each animal were spiked with nonimmune chicken IgY (0.03 μg / lane, Promega), separated by 4-15% Tris-HCl gel electrophoresis and transferred to 0.45 μm pore size nitrocellulose membranes as above, and immunoblotted with one of the following antibodies: anti-phospho-glur1p845 (1 : 100; UpState), anti-glur1 (1

10 μg / ml;upstate), anti-phospho-glur1p831 (1 : 500, Upstate), anti-glur2 (0.5 μg / ml, Chemicon), anti-camkii (1 : 2000, Abcam), anti-phosphot286-camkii (1 : 200, Abcam), anti-nr2a (2 μg / ml, Upstate), anti-gsk3β (1 : 200, SantaCruz), and anti-phospho-gsk3β (Ser9; 1 : 300, Cell Signaling). All blots were first blocked for one hour at room temperature in freshly prepared 3% nonfat dry milk (Biorad) in 1 X PBS (Fisher) with 0.05% Tween 20 (Sigma) (PBST- MLK), incubated with the primary antibody overnight with agitation at 4 C, rinsed four times in ddh 2 O, and then incubated with the secondary antibody (horseradish peroxidase-conjugated anti-rabbit or anti-mouse IgG antibodies, Chemicon) for one hour with agitation at room temperature in PBST-MLK. After the final washes (two times in PBST, 4 times in ddh 2 O), the immunoreactive bands were visualized using autoradiographic enhanced chemiluminescence (ECL-Plus, Amersham) captured by Typhoon 9410 Variable Mode Imager (Amersham). Blots were re-probed with anti-igy (for one hour), or, after incubation with anti-phospho-glur1p845 or anti-phospho-glur1p831, re-stripped and probed with anti-glur1, which recognizes both phosphorylated and non-phosphorylated GluR1. ECL signal intensities were quantified using the ImageQuant software (Amersham). Optical densities were calculated for each band of interest after performing background-correction (by subtracting the value of a band immediately above the band of interest in the same lane) and normalization (by dividing for the within-lane IgY signal used as loading control). The signal for phospho-specific antibodies was normalized to the within-lane total GluR1 signal and expressed as ratio (e.g. GluR1-s845 / GluR1). The linear range for each antibody was determined using a 5-point dilution series of rat cortical synaptoneurosomes prior to running the experimental samples. During the entire procedure, from synaptoneurosome preparation to signal intensity quantification, the experimenter was blind to the origin of the samples. Most experiments that used IgY as loading control were subsequently repeated using actin, and gave similar results (data not shown; due to the limited amount of proteins in synaptoneurosomes, not all Western blots could be performed using both controls). Electrophysiological studies LFP evoked responses In all rats LFP and EMG signals were continuously recorded during a 24-h baseline period, sleep deprivation, and recovery after sleep deprivation. The collection of LFP evoked responses occurred at ~ 4-hour intervals, usually starting at around light onset (10 am) of the baseline day, and in some animals continued during sleep deprivation and the following 4 hours of recovery. Responses were collected from the left frontal cortex (M1, B: mm, L: 2-3 mm) after electrical stimulation of the contralateral homotopic area. The transcallosal stimulation paradigm was chosen because the corpus callosum is the major brain commissure, and is composed of well organized, uniform excitatory fibers that establish direct monosynaptic excitatory cortical connections between homotopic areas, increasing the likelihood of obtaining monosynaptic responses. The electrode configuration was optimized for callosal connections, which terminate in the superficial (I - III) and deep (V - Vi) layers. In these experimental conditions, negative deflections of the field potential reflect current sinks related to inward currents along the dendrites of pyramidal cells, as a result of excitatory synaptic input. Evoked potentials obtained in the LFP signal looked similar to the responses obtained from the deep electrode referenced to the cerebellum. The responses obtained by referencing the superficial electrode to the cerebellum rarely had a well defined early monosynaptic component, and therefore were not analyzed. Prior to the experiment, input-output tests were performed in each rat. First, stimulus intensity was varied in the range between 0.1 and 7 ma (in most cases < 2 ma) to obtain a clearly identifiable early component. Evoked responses were then collected for each of 4-7 different intensities (10-15 responses / intensity), ranging from sub-threshold intensity to a level below

11 that necessary to induce a motor response. Stability and reproducibility of the shape and intensity-dependence of the responses were confirmed 2-3 days prior to the beginning of the experiment. For the final analysis one intensity was selected, corresponding to ~ 50% of the maximal intensity. The early component of the LFP evoked response consisted of a depth-negative wave with a latency to the peak of ~ 4-5 ms. The slope of the component was determined in each individual trial, and computed as mean first derivative of the first down-going segment. In addition to the short latency, the monosynaptic nature of the response was indicated by the fact that 1) the response could follow high frequency stimulation (100 Hz; Fig. 2b); 2) its latency did not change with increasing intensity of the stimulation. Mean slopes were computed per each recording session (e.g. W0, W1 etc). A normalization procedure was applied to eliminate differences among individual animals in the absolute values of the slopes. Thus, for each rat, the values of the slopes for each experimental condition (e.g. W0 and W1) are expressed as % of the mean between them prior to averaging among animals. S88 Dual Output Square Pulse Stimulator and stimulus isolating unit (PSIU-6; Grass- Telefactor, AstroMed, Inc.) were used for electrical stimulation, which consisted of monophasic squared pulse of 0.1 ms duration. Each recording session lasted approximately 1-3 min, during which a sufficient number of artifact-free responses was collected (on average ~ 40, at irregular intervals ranging from 3 sec to 1 min). In most experiments LFP evoked responses were collected in quiet waking. To standardize this behavioral state as much as possible, behavior, EEG, and EMG activity of each rat were under constant visual observation by one investigator for the entire stimulation session and for the preceding 10 minutes, during which a second investigator interacted in a standardized manner with each rat ensuring that it was awake (rats had been habituated to this protocol for at least one week). Direct contact with the animals to induce arousal was always avoided. Stimuli were delivered manually only when the rat was quietly awake (immobile, eyes open, low EMG tone, low-voltage, high-frequency cortical EEG activity). We did not attempt to record evoked responses continuously for several hours in freely behaving rats because it is impossible to maintain the animals in a standard quiet wakefulness for more than a few minutes. Moreover, even if successful, such procedure is likely to be stressful, because it affects the spontaneous behavior of the rats. Furthermore, we always tried to minimize the number of stimuli per session, to avoid potential damage to the tissue or the induction of long-lasting changes in excitability. We did not find any consistent response change within each recording session (Fig. 2g), suggesting that our stimulation protocol per se did not lead to significant plastic changes. In some experiments (described in Fig. 3) evoked responses for the high and low sleep pressure conditions were also collected during active waking, NREM sleep, and REM sleep. After each session, all individual responses were visually screened by an experimenter blind to their origin, and only those that were recorded on a background of stable low-amplitude, high-frequency cortical activity were used for further analysis. LFP evoked responses show substantial and predictable changes in shape and/or amplitude with changes in behavioral state, and in some individuals a few responses (less than 5%) were discarded on that basis (largely due to brief movements immediately before the investigator triggered the stimulation). Responses were recorded with 5 khz sampling rate, analog filters: high-pass filter: attenuation 50 % amplitude at 0.1 Hz; low-pass filter: attenuation 50% amplitude at 1 khz. In a pilot study, we recorded two consecutive sessions of LFP evoked responses at the light-dark transition (10 pm) and at the dark-light transition (10 am). In the morning the first session was performed ~ 5 min before lights went on, and the second session ~ 5 min after lights went on; in the evening the first session occurred ~ 5 min before lights went off on and the second session ~ 5 min after lights went off. We found no consistent changes in the slope of LFPs between the 'light' and 'dark' session at either 10 am or 10 pm. For LTP induction experiments, in 7 rats transcallosal evoked responses were collected as described above (always in quiet wakefulness) at light onset, after a spontaneous waking pe-

12 riod, and after ~ 4 hours of undisturbed sleep. LFPs were collected immediately before and after a set of high-frequency trains was delivered to the frontal cortex to induce LTP. The stimulation paradigm consisted of sixty 24-ms trains at 300 Hz delivered every 10 sec (=60 trains in total). Each rat was subjected to the LTP-inducing protocol twice, at light onset and after 4 hours of sleep (the two conditions were counter-balanced, and spaced at least 2 days apart). To measure brain temperature, a calibrated 10-kOhm thermistor (model 44008; Omega Engineering Inc., USA) was implanted through a hole in the skull above the parietal cortex. The data were acquired with the LabJack device and LabView software and stored on PC with 50 Hz resolution. Consistent with previous published studies, we found that brain temperature was, on average, 0.6 C ± 0.1 higher during the dark period than during the light period (p < 0.01). In addition, we found that brain temperature during wakefulness was 0.35 C ± 0.05 higher than during sleep during the light period, and 0.4 C ± 0.06 higher than during sleep during the dark period. Histological verification Upon completion of the experiments the position of the LFP electrodes was verified by histology in all animals. Perfusion was performed under deep isoflurane anesthesia (3% in oxygen), with saline followed by a 4% solution of paraformaldehyde (PFA) in 0.1 M sodium phosphate, ph 7.2. Brains were post-fixed overnight in 4% PFA, cryoprotected in increasing concentration of sucrose (15, 20, 30%) in phosphate buffered saline, rapidly frozen on dry ice, cut into 50 µm serial coronal sections, and subjected to cresyl-violet (Nissl) staining. In all cases the deep LFP electrode was located within layer V, whereas the superficial LFP electrode was in layers I - II.

Supplementary Figure 1

Supplementary Figure 1 Supplementary Figure 1 Miniature microdrive, spike sorting and sleep stage detection. a, A movable recording probe with 8-tetrodes (32-channels). It weighs ~1g. b, A mouse implanted with 8 tetrodes in

More information

Ube3a is required for experience-dependent maturation of the neocortex

Ube3a is required for experience-dependent maturation of the neocortex Ube3a is required for experience-dependent maturation of the neocortex Koji Yashiro, Thorfinn T. Riday, Kathryn H. Condon, Adam C. Roberts, Danilo R. Bernardo, Rohit Prakash, Richard J. Weinberg, Michael

More information

Nature Neuroscience: doi: /nn Supplementary Figure 1. Trial structure for go/no-go behavior

Nature Neuroscience: doi: /nn Supplementary Figure 1. Trial structure for go/no-go behavior Supplementary Figure 1 Trial structure for go/no-go behavior a, Overall timeline of experiments. Day 1: A1 mapping, injection of AAV1-SYN-GCAMP6s, cranial window and headpost implantation. Water restriction

More information

Protocol for Rat Sleep EEG

Protocol for Rat Sleep EEG Protocol for Rat Sleep EEG Subjects Male Spraue Dawley rats weihin 250-300 rams at the time of surery are used. Food and water are available ad libitum throuhout the experiment. Rats are roup housed prior

More information

Nature Neuroscience: doi: /nn Supplementary Figure 1. Large-scale calcium imaging in vivo.

Nature Neuroscience: doi: /nn Supplementary Figure 1. Large-scale calcium imaging in vivo. Supplementary Figure 1 Large-scale calcium imaging in vivo. (a) Schematic illustration of the in vivo camera imaging set-up for large-scale calcium imaging. (b) High-magnification two-photon image from

More information

ON-LINE REPOSITORY MATERIAL DIFFERENCES IN SLEEP-INDUCED HYPOXIA BETWEEN A/J AND DBA/2J MOUSE STRAINS

ON-LINE REPOSITORY MATERIAL DIFFERENCES IN SLEEP-INDUCED HYPOXIA BETWEEN A/J AND DBA/2J MOUSE STRAINS 37 ON-LINE REPOSITORY MATERIAL DIFFERENCES IN SLEEP-INDUCED HYPOXIA BETWEEN A/J AND DBA/2J MOUSE STRAINS Arnon E. Rubin, Vsevolod Y. Polotsky, Alex Balbir, Jerry A. Krishnan, Alan R. Schwartz, Philip L.

More information

Protocol for Gene Transfection & Western Blotting

Protocol for Gene Transfection & Western Blotting The schedule and the manual of basic techniques for cell culture Advanced Protocol for Gene Transfection & Western Blotting Schedule Day 1 26/07/2008 Transfection Day 3 28/07/2008 Cell lysis Immunoprecipitation

More information

SUPPLEMENTARY INFORMATION. Supplementary Figure 1

SUPPLEMENTARY INFORMATION. Supplementary Figure 1 SUPPLEMENTARY INFORMATION Supplementary Figure 1 The supralinear events evoked in CA3 pyramidal cells fulfill the criteria for NMDA spikes, exhibiting a threshold, sensitivity to NMDAR blockade, and all-or-none

More information

Physiology Unit 2 CONSCIOUSNESS, THE BRAIN AND BEHAVIOR

Physiology Unit 2 CONSCIOUSNESS, THE BRAIN AND BEHAVIOR Physiology Unit 2 CONSCIOUSNESS, THE BRAIN AND BEHAVIOR In Physiology Today What the Brain Does The nervous system determines states of consciousness and produces complex behaviors Any given neuron may

More information

SLEEP STAGING AND AROUSAL. Dr. Tripat Deep Singh (MBBS, MD, RPSGT, RST) International Sleep Specialist (World Sleep Federation program)

SLEEP STAGING AND AROUSAL. Dr. Tripat Deep Singh (MBBS, MD, RPSGT, RST) International Sleep Specialist (World Sleep Federation program) SLEEP STAGING AND AROUSAL Dr. Tripat Deep Singh (MBBS, MD, RPSGT, RST) International Sleep Specialist (World Sleep Federation program) Scoring of Sleep Stages in Adults A. Stages of Sleep Stage W Stage

More information

Unique functional properties of somatostatin-expressing GABAergic neurons in mouse barrel cortex

Unique functional properties of somatostatin-expressing GABAergic neurons in mouse barrel cortex Supplementary Information Unique functional properties of somatostatin-expressing GABAergic neurons in mouse barrel cortex Luc Gentet, Yves Kremer, Hiroki Taniguchi, Josh Huang, Jochen Staiger and Carl

More information

The Schedule and the Manual of Basic Techniques for Cell Culture

The Schedule and the Manual of Basic Techniques for Cell Culture The Schedule and the Manual of Basic Techniques for Cell Culture 1 Materials Calcium Phosphate Transfection Kit: Invitrogen Cat.No.K2780-01 Falcon tube (Cat No.35-2054:12 x 75 mm, 5 ml tube) Cell: 293

More information

Physiology Unit 2 CONSCIOUSNESS, THE BRAIN AND BEHAVIOR

Physiology Unit 2 CONSCIOUSNESS, THE BRAIN AND BEHAVIOR Physiology Unit 2 CONSCIOUSNESS, THE BRAIN AND BEHAVIOR What the Brain Does The nervous system determines states of consciousness and produces complex behaviors Any given neuron may have as many as 200,000

More information

Supplementary figure 1: LII/III GIN-cells show morphological characteristics of MC

Supplementary figure 1: LII/III GIN-cells show morphological characteristics of MC 1 2 1 3 Supplementary figure 1: LII/III GIN-cells show morphological characteristics of MC 4 5 6 7 (a) Reconstructions of LII/III GIN-cells with somato-dendritic compartments in orange and axonal arborizations

More information

Characterization of Sleep Spindles

Characterization of Sleep Spindles Characterization of Sleep Spindles Simon Freedman Illinois Institute of Technology and W.M. Keck Center for Neurophysics, UCLA (Dated: September 5, 2011) Local Field Potential (LFP) measurements from sleep

More information

Supplementary Methods

Supplementary Methods 1 Supplementary Methods Social Preference Test Subjects Seventy-four Long-Evans, male rats served as subjects (S-rats) in the foodpreference test, with 40 assigned to the CXT-Same (CXT-S) Condition and

More information

Microcircuitry coordination of cortical motor information in self-initiation of voluntary movements

Microcircuitry coordination of cortical motor information in self-initiation of voluntary movements Y. Isomura et al. 1 Microcircuitry coordination of cortical motor information in self-initiation of voluntary movements Yoshikazu Isomura, Rie Harukuni, Takashi Takekawa, Hidenori Aizawa & Tomoki Fukai

More information

Supplementary Figure 1: Kv7 currents in neonatal CA1 neurons measured with the classic M- current voltage-clamp protocol.

Supplementary Figure 1: Kv7 currents in neonatal CA1 neurons measured with the classic M- current voltage-clamp protocol. Supplementary Figures 1-11 Supplementary Figure 1: Kv7 currents in neonatal CA1 neurons measured with the classic M- current voltage-clamp protocol. (a), Voltage-clamp recordings from CA1 pyramidal neurons

More information

Nov versus Fam. Fam 1 versus. Fam 2. Supplementary figure 1

Nov versus Fam. Fam 1 versus. Fam 2. Supplementary figure 1 a Environment map similarity score (mean r ).5..3.2.1 Fam 1 versus Fam 2 Nov versus Fam b Environment cofiring similarity score (mean r ).7.6.5..3.2.1 Nov versus Fam Fam 1 versus Fam 2 First half versus

More information

states of brain activity sleep, brain waves DR. S. GOLABI PH.D. IN MEDICAL PHYSIOLOGY

states of brain activity sleep, brain waves DR. S. GOLABI PH.D. IN MEDICAL PHYSIOLOGY states of brain activity sleep, brain waves DR. S. GOLABI PH.D. IN MEDICAL PHYSIOLOGY introduction all of us are aware of the many different states of brain activity, including sleep, wakefulness, extreme

More information

Nature Methods: doi: /nmeth Supplementary Figure 1. Activity in turtle dorsal cortex is sparse.

Nature Methods: doi: /nmeth Supplementary Figure 1. Activity in turtle dorsal cortex is sparse. Supplementary Figure 1 Activity in turtle dorsal cortex is sparse. a. Probability distribution of firing rates across the population (notice log scale) in our data. The range of firing rates is wide but

More information

Nature Medicine: doi: /nm.4084

Nature Medicine: doi: /nm.4084 Supplementary Figure 1: Sample IEDs. (a) Sample hippocampal IEDs from different kindled rats (scale bar = 200 µv, 100 ms). (b) Sample temporal lobe IEDs from different subjects with epilepsy (scale bar

More information

Supplementary Figure 1. Example of an amygdala neuron whose activity reflects value during the visual stimulus interval. This cell responded more

Supplementary Figure 1. Example of an amygdala neuron whose activity reflects value during the visual stimulus interval. This cell responded more 1 Supplementary Figure 1. Example of an amygdala neuron whose activity reflects value during the visual stimulus interval. This cell responded more strongly when an image was negative than when the same

More information

Exclusion criteria and outlier detection

Exclusion criteria and outlier detection 1 Exclusion criteria and outlier detection 1 2 Supplementary Fig. 1 31 subjects complied with the inclusion criteria as tested during the familiarization session. The upper part of the figure (ovals) indicates

More information

Behavioral generalization

Behavioral generalization Supplementary Figure 1 Behavioral generalization. a. Behavioral generalization curves in four Individual sessions. Shown is the conditioned response (CR, mean ± SEM), as a function of absolute (main) or

More information

Supplementary Material for

Supplementary Material for Supplementary Material for Selective neuronal lapses precede human cognitive lapses following sleep deprivation Supplementary Table 1. Data acquisition details Session Patient Brain regions monitored Time

More information

Nature Neuroscience: doi: /nn Supplementary Figure 1. Diverse anorexigenic signals induce c-fos expression in CEl PKC-δ + neurons

Nature Neuroscience: doi: /nn Supplementary Figure 1. Diverse anorexigenic signals induce c-fos expression in CEl PKC-δ + neurons Supplementary Figure 1 Diverse anorexigenic signals induce c-fos expression in CEl PKC-δ + neurons a-c. Quantification of CEl c-fos expression in mice intraperitoneal injected with anorexigenic drugs (a),

More information

Supplementary material: Materials and suppliers

Supplementary material: Materials and suppliers Supplementary material: Materials and suppliers Electrophoresis consumables including tris-glycine, acrylamide, SDS buffer and Coomassie Brilliant Blue G-2 dye (CBB) were purchased from Ameresco (Solon,

More information

Experience-dependent recovery of vision following chronic deprivation amblyopia. Hai-Yan He, Baisali Ray, Katie Dennis and Elizabeth M.

Experience-dependent recovery of vision following chronic deprivation amblyopia. Hai-Yan He, Baisali Ray, Katie Dennis and Elizabeth M. Experience-dependent recovery of vision following chronic deprivation amblyopia Hai-Yan He, Baisali Ray, Katie Dennis and Elizabeth M. Quinlan a 3. 2.5 2. 1.5.5 Deprived eye Non-deprived VCtx * * b 8.

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION Supplementary Figure 1. Normal AMPAR-mediated fepsp input-output curve in CA3-Psen cdko mice. Input-output curves, which are plotted initial slopes of the evoked fepsp as function of the amplitude of the

More information

Supplementary Figure S1: Histological analysis of kainate-treated animals

Supplementary Figure S1: Histological analysis of kainate-treated animals Supplementary Figure S1: Histological analysis of kainate-treated animals Nissl stained coronal or horizontal sections were made from kainate injected (right) and saline injected (left) animals at different

More information

Nature Neuroscience: doi: /nn Supplementary Figure 1

Nature Neuroscience: doi: /nn Supplementary Figure 1 Supplementary Figure 1 Hippocampal recordings. a. (top) Post-operative MRI (left, depicting a depth electrode implanted along the longitudinal hippocampal axis) and co-registered preoperative MRI (right)

More information

The AASM Manual for the Scoring of Sleep and Associated Events

The AASM Manual for the Scoring of Sleep and Associated Events The AASM Manual for the Scoring of Sleep and Associated Events Summary of Updates in Version 2.1 July 1, 2014 The American Academy of Sleep Medicine (AASM) is committed to ensuring that The AASM Manual

More information

Supplemental Information. A Visual-Cue-Dependent Memory Circuit. for Place Navigation

Supplemental Information. A Visual-Cue-Dependent Memory Circuit. for Place Navigation Neuron, Volume 99 Supplemental Information A Visual-Cue-Dependent Memory Circuit for Place Navigation Han Qin, Ling Fu, Bo Hu, Xiang Liao, Jian Lu, Wenjing He, Shanshan Liang, Kuan Zhang, Ruijie Li, Jiwei

More information

Supplementary Materials for

Supplementary Materials for advances.sciencemag.org/cgi/content/full/3/3/e1600955/dc1 Supplementary Materials for Flexible and stretchable nanowire-coated fibers for optoelectronic probing of spinal cord circuits Chi Lu, Seongjun

More information

Supplemental Figure 1

Supplemental Figure 1 A C E Supplemental Figure 1 AP 1mm A+C 1mm Apo 1mm B D 1mm CGS F 1mm All 1mm Supplemental Figure 1. The locations of microinfusion cannulae. Each dot represents the cannula tip of a given rat in Figure.

More information

Is action potential threshold lowest in the axon?

Is action potential threshold lowest in the axon? Supplementary information to: Is action potential threshold lowest in the axon? Maarten H. P. Kole & Greg J. Stuart Supplementary Fig. 1 Analysis of action potential (AP) threshold criteria. (a) Example

More information

EEG and some applications (seizures and sleep)

EEG and some applications (seizures and sleep) EEG and some applications (seizures and sleep) EEG: stands for electroencephalography and is a graphed representation of the electrical activity of the brain. EEG is the recording of electrical activity

More information

CROSSMODAL PLASTICITY IN SPECIFIC AUDITORY CORTICES UNDERLIES VISUAL COMPENSATIONS IN THE DEAF "

CROSSMODAL PLASTICITY IN SPECIFIC AUDITORY CORTICES UNDERLIES VISUAL COMPENSATIONS IN THE DEAF Supplementary Online Materials To complement: CROSSMODAL PLASTICITY IN SPECIFIC AUDITORY CORTICES UNDERLIES VISUAL COMPENSATIONS IN THE DEAF " Stephen G. Lomber, M. Alex Meredith, and Andrej Kral 1 Supplementary

More information

File name: Supplementary Information Description: Supplementary Figures, Supplementary Table and Supplementary References

File name: Supplementary Information Description: Supplementary Figures, Supplementary Table and Supplementary References File name: Supplementary Information Description: Supplementary Figures, Supplementary Table and Supplementary References File name: Supplementary Data 1 Description: Summary datasheets showing the spatial

More information

Sum of Neurally Distinct Stimulus- and Task-Related Components.

Sum of Neurally Distinct Stimulus- and Task-Related Components. SUPPLEMENTARY MATERIAL for Cardoso et al. 22 The Neuroimaging Signal is a Linear Sum of Neurally Distinct Stimulus- and Task-Related Components. : Appendix: Homogeneous Linear ( Null ) and Modified Linear

More information

Fig. S4. Current-voltage relations of iglurs. A-C: time courses of currents evoked by 100 ms pulses

Fig. S4. Current-voltage relations of iglurs. A-C: time courses of currents evoked by 100 ms pulses Fig. S1. Immunohistochemical detection of iglur2 protein in single islet cells. A: α cells identified using glucagon-specific antibody express the iglur2 subtype of AMPA receptor. 24 out of 26 identified

More information

CHAPTER 6 INTERFERENCE CANCELLATION IN EEG SIGNAL

CHAPTER 6 INTERFERENCE CANCELLATION IN EEG SIGNAL 116 CHAPTER 6 INTERFERENCE CANCELLATION IN EEG SIGNAL 6.1 INTRODUCTION Electrical impulses generated by nerve firings in the brain pass through the head and represent the electroencephalogram (EEG). Electrical

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION doi: 10.1038/nature06310 SUPPLEMENTARY INFORMATION www.nature.com/nature 1 www.nature.com/nature 2 www.nature.com/nature 3 Supplementary Figure S1 Spontaneous duration of wake, SWS and REM sleep (expressed

More information

SleepSign System. FAQs User List Software Overview

SleepSign System. FAQs User List Software Overview FAQs User List Software Overview SleepSign System SSA100W SleepSign System - Frequently Asked Questions 1. Why should I use SleepSign software? 2. Can SleepSign import digital data generated from my BIOPAC

More information

Supporting Online Material for

Supporting Online Material for www.sciencemag.org/cgi/content/full/317/5841/183/dc1 Supporting Online Material for Astrocytes Potentiate Transmitter Release at Single Hippocampal Synapses Gertrudis Perea and Alfonso Araque* *To whom

More information

Protein MultiColor Stable, Low Range

Protein MultiColor Stable, Low Range Product Name: DynaMarker Protein MultiColor Stable, Low Range Code No: DM670L Lot No: ******* Size: 200 μl x 3 (DM670 x 3) (120 mini-gel lanes) Storage: 4 C Stability: 12 months at 4 C Storage Buffer:

More information

Islet viability assay and Glucose Stimulated Insulin Secretion assay RT-PCR and Western Blot

Islet viability assay and Glucose Stimulated Insulin Secretion assay RT-PCR and Western Blot Islet viability assay and Glucose Stimulated Insulin Secretion assay Islet cell viability was determined by colorimetric (3-(4,5-dimethylthiazol-2-yl)-2,5- diphenyltetrazolium bromide assay using CellTiter

More information

Supplementary Figure 1

Supplementary Figure 1 8w Pia II/III IV V VI PV EYFP EYFP PV EYFP PV d PV EYFP Supplementary Figure a Spike probability x - PV-Cre d Spike probability x - RS RS b e Spike probability Spike probability.6......8..... FS FS c f

More information

Supplementary Figure 1 Information on transgenic mouse models and their recording and optogenetic equipment. (a) 108 (b-c) (d) (e) (f) (g)

Supplementary Figure 1 Information on transgenic mouse models and their recording and optogenetic equipment. (a) 108 (b-c) (d) (e) (f) (g) Supplementary Figure 1 Information on transgenic mouse models and their recording and optogenetic equipment. (a) In four mice, cre-dependent expression of the hyperpolarizing opsin Arch in pyramidal cells

More information

Introduction to Electrophysiology

Introduction to Electrophysiology Introduction to Electrophysiology Dr. Kwangyeol Baek Martinos Center for Biomedical Imaging Massachusetts General Hospital Harvard Medical School 2018-05-31s Contents Principles in Electrophysiology Techniques

More information

Exploratory Behavior, Cortical BDNF Expression, and Sleep Homeostasis

Exploratory Behavior, Cortical BDNF Expression, and Sleep Homeostasis SLEEP HOMEOSTASIS Exploratory Behavior, Cortical BDNF Expression, and Sleep Homeostasis Reto Huber, PhD; Giulio Tononi, MD, PhD; Chiara Cirelli, MD, PhD Department of Psychiatry, University of Wisconsin-Madison,

More information

LEARNING MANUAL OF PSG CHART

LEARNING MANUAL OF PSG CHART LEARNING MANUAL OF PSG CHART POLYSOMNOGRAM, SLEEP STAGE SCORING, INTERPRETATION Sleep Computing Committee, Japanese Society of Sleep Research LEARNING MANUAL OF PSG CHART POLYSOMNOGRAM, SLEEP STAGE SCORING,

More information

Theta sequences are essential for internally generated hippocampal firing fields.

Theta sequences are essential for internally generated hippocampal firing fields. Theta sequences are essential for internally generated hippocampal firing fields. Yingxue Wang, Sandro Romani, Brian Lustig, Anthony Leonardo, Eva Pastalkova Supplementary Materials Supplementary Modeling

More information

Sleep stages. Awake Stage 1 Stage 2 Stage 3 Stage 4 Rapid eye movement sleep (REM) Slow wave sleep (NREM)

Sleep stages. Awake Stage 1 Stage 2 Stage 3 Stage 4 Rapid eye movement sleep (REM) Slow wave sleep (NREM) Sleep stages Awake Stage 1 Stage 2 Stage 3 Stage 4 Rapid eye movement sleep (REM) Slow wave sleep (NREM) EEG waves EEG Electrode Placement Classifying EEG brain waves Frequency: the number of oscillations/waves

More information

SUPPLEMENTAL MATERIAL. Supplementary Methods

SUPPLEMENTAL MATERIAL. Supplementary Methods SUPPLEMENTAL MATERIAL Supplementary Methods Culture of cardiomyocytes, fibroblasts and cardiac microvascular endothelial cells The isolation and culturing of neonatal rat ventricular cardiomyocytes was

More information

Thalamic control of cortical states

Thalamic control of cortical states Supplementary Information Thalamic control of cortical states James F.A. Poulet, Laura M.J. Fernandez, Sylvain Crochet & Carl C.H. Petersen Supplementary Information consists of: 1. Methods 2. Supplementary

More information

RayBio KinaseSTAR TM Akt Activity Assay Kit

RayBio KinaseSTAR TM Akt Activity Assay Kit Activity Assay Kit User Manual Version 1.0 March 13, 2015 RayBio KinaseSTAR TM Akt Activity Kit Protocol (Cat#: 68AT-Akt-S40) RayBiotech, Inc. We Provide You With Excellent Support And Service Tel:(Toll

More information

Astrocyte signaling controls spike timing-dependent depression at neocortical synapses

Astrocyte signaling controls spike timing-dependent depression at neocortical synapses Supplementary Information Astrocyte signaling controls spike timing-dependent depression at neocortical synapses Rogier Min and Thomas Nevian Department of Physiology, University of Berne, Bern, Switzerland

More information

Western Immunoblotting Preparation of Samples:

Western Immunoblotting Preparation of Samples: Western Immunoblotting Preparation of Samples: Total Protein Extraction from Culture Cells: Take off the medium Wash culture with 1 x PBS 1 ml hot Cell-lysis Solution into T75 flask Scrap out the cells

More information

Simplest method: Questionnaires. Retrospective: past week, month, year, lifetime Daily: Sleep diary What kinds of questions would you ask?

Simplest method: Questionnaires. Retrospective: past week, month, year, lifetime Daily: Sleep diary What kinds of questions would you ask? Spencer Dawson Simplest method: Questionnaires Retrospective: past week, month, year, lifetime Daily: Sleep diary What kinds of questions would you ask? Did you nap during the day? Bed time and rise time

More information

RayBio Human, Mouse and Rat Phospho-NF-kB P65 (Ser536) and Total NF-kB P65 ELISA Kit

RayBio Human, Mouse and Rat Phospho-NF-kB P65 (Ser536) and Total NF-kB P65 ELISA Kit RayBio Human, Mouse and Rat Phospho-NF-kB P65 (Ser536) and Total NF-kB P65 ELISA Kit Catalog #: PEL-NFKBP65-S536-T User Manual Last revised October 10, 2017 Caution: Extraordinarily useful information

More information

SUPPLEMENTARY INFORMATION. Rett Syndrome Mutation MeCP2 T158A Disrupts DNA Binding, Protein Stability and ERP Responses

SUPPLEMENTARY INFORMATION. Rett Syndrome Mutation MeCP2 T158A Disrupts DNA Binding, Protein Stability and ERP Responses SUPPLEMENTARY INFORMATION Rett Syndrome Mutation T158A Disrupts DNA Binding, Protein Stability and ERP Responses Darren Goffin, Megan Allen, Le Zhang, Maria Amorim, I-Ting Judy Wang, Arith-Ruth S. Reyes,

More information

An Overview of BMIs. Luca Rossini. Workshop on Brain Machine Interfaces for Space Applications

An Overview of BMIs. Luca Rossini. Workshop on Brain Machine Interfaces for Space Applications An Overview of BMIs Luca Rossini Workshop on Brain Machine Interfaces for Space Applications European Space Research and Technology Centre, European Space Agency Noordvijk, 30 th November 2009 Definition

More information

EE 4BD4 Lecture 11. The Brain and EEG

EE 4BD4 Lecture 11. The Brain and EEG EE 4BD4 Lecture 11 The Brain and EEG 1 Brain Wave Recordings Recorded extra-cellularly from scalp (EEG) Recorded from extra-cellularly from surface of cortex (ECOG) Recorded extra-cellularly from deep

More information

Supporting Information

Supporting Information ATP from synaptic terminals and astrocytes regulates NMDA receptors and synaptic plasticity through PSD- 95 multi- protein complex U.Lalo, O.Palygin, A.Verkhratsky, S.G.N. Grant and Y. Pankratov Supporting

More information

Supplementary Information

Supplementary Information Hyperpolarization-activated cation channels inhibit EPSPs by interactions with M-type K + channels Meena S. George, L.F. Abbott, Steven A. Siegelbaum Supplementary Information Part 1: Supplementary Figures

More information

Supporting Information File S2

Supporting Information File S2 Pulli et al. Measuring Myeloperoxidase Activity in Biological Samples Page 1 of 6 Supporting Information File S2 Step-by-Step Protocol Reagents: Sucrose (Sigma, S3089) CaCl 2 (Sigma, C5770) Heparin Sodium

More information

Nature Neuroscience: doi: /nn Supplementary Figure 1. Behavioral training.

Nature Neuroscience: doi: /nn Supplementary Figure 1. Behavioral training. Supplementary Figure 1 Behavioral training. a, Mazes used for behavioral training. Asterisks indicate reward location. Only some example mazes are shown (for example, right choice and not left choice maze

More information

Quick Guide - eabr with Eclipse

Quick Guide - eabr with Eclipse What is eabr? Quick Guide - eabr with Eclipse An electrical Auditory Brainstem Response (eabr) is a measurement of the ABR using an electrical stimulus. Instead of a traditional acoustic stimulus the cochlear

More information

Bone marrow-derived mesenchymal stem cells improve diabetes-induced cognitive impairment by

Bone marrow-derived mesenchymal stem cells improve diabetes-induced cognitive impairment by Nakano et al. Supplementary information 1. Supplementary Figure 2. Methods 3. References Bone marrow-derived mesenchymal stem cells improve diabetes-induced cognitive impairment by exosome transfer into

More information

Supplemental Information. In Vivo Optogenetic Stimulation. of Neocortical Excitatory Neurons. Drives Brain-State-Dependent Inhibition

Supplemental Information. In Vivo Optogenetic Stimulation. of Neocortical Excitatory Neurons. Drives Brain-State-Dependent Inhibition Current Biology, Volume 21 Supplemental Information In Vivo Optogenetic Stimulation of Neocortical Excitatory Neurons Drives Brain-State-Dependent Inhibition Celine Mateo, Michael Avermann, Luc J. Gentet,

More information

2,6,9-Triazabicyclo[3.3.1]nonanes as overlooked. amino-modification products by acrolein

2,6,9-Triazabicyclo[3.3.1]nonanes as overlooked. amino-modification products by acrolein Supplementary Information 2,6,9-Triazabicyclo[3.3.1]nonanes as overlooked amino-modification products by acrolein Ayumi Tsutsui and Katsunori Tanaka* Biofunctional Synthetic Chemistry Laboratory, RIKEN

More information

DCNV RESEARCH TOOL: INVESTIGATION OF ANTICIPATORY BRAIN POTENTIALS

DCNV RESEARCH TOOL: INVESTIGATION OF ANTICIPATORY BRAIN POTENTIALS DCNV RESEARCH TOOL: INVESTIGATION OF ANTICIPATORY BRAIN POTENTIALS Roman Golubovski, Dipl-Eng J.Sandanski 116-3/24 91000 Skopje, Macedonia Phone: + 389 91 165 367, Fax: + 389 91 165 304 email: roman.golubovski@iname.com

More information

EEG Electrode Placement

EEG Electrode Placement EEG Electrode Placement Classifying EEG brain waves Frequency: the number of oscillations/waves per second, measured in Hertz (Hz) reflects the firing rate of neurons alpha, beta, theta, delta Amplitude:

More information

Neurorobotics, and brain-machine interfaces. Oct. 10 th, 2006.

Neurorobotics, and brain-machine interfaces. Oct. 10 th, 2006. Neurorobotics, and brain-machine interfaces Oct. 10 th, 2006. Catching up from last class Pg 121 Wessberg ( ) Nicolelis, Real-time prediction of hand trajectory by ensembles of cortical neurons in primates

More information

Human Immunodeficiency Virus type 1 (HIV-1) gp120 / Glycoprotein 120 ELISA Pair Set

Human Immunodeficiency Virus type 1 (HIV-1) gp120 / Glycoprotein 120 ELISA Pair Set Human Immunodeficiency Virus type 1 (HIV-1) gp120 / Glycoprotein 120 ELISA Pair Set Catalog Number : SEK11233 To achieve the best assay results, this manual must be read carefully before using this product

More information

Basics of Polysomnography. Chitra Lal, MD, FCCP, FAASM Assistant professor of Medicine, Pulmonary, Critical Care and Sleep, MUSC, Charleston, SC

Basics of Polysomnography. Chitra Lal, MD, FCCP, FAASM Assistant professor of Medicine, Pulmonary, Critical Care and Sleep, MUSC, Charleston, SC Basics of Polysomnography Chitra Lal, MD, FCCP, FAASM Assistant professor of Medicine, Pulmonary, Critical Care and Sleep, MUSC, Charleston, SC Basics of Polysomnography Continuous and simultaneous recording

More information

Structural basis for the role of inhibition in facilitating adult brain plasticity

Structural basis for the role of inhibition in facilitating adult brain plasticity Structural basis for the role of inhibition in facilitating adult brain plasticity Jerry L. Chen, Walter C. Lin, Jae Won Cha, Peter T. So, Yoshiyuki Kubota & Elly Nedivi SUPPLEMENTARY FIGURES 1-6 a b M

More information

Supplementary Figure 1

Supplementary Figure 1 Supplementary Figure 1 Supplementary Figure 1. Short latency of the fepsp evoked in CA3 by electrical stimulation of perforant path inputs (a) Single and superimposed representative perforant pathway-ca3

More information

TFEB-mediated increase in peripheral lysosomes regulates. Store Operated Calcium Entry

TFEB-mediated increase in peripheral lysosomes regulates. Store Operated Calcium Entry TFEB-mediated increase in peripheral lysosomes regulates Store Operated Calcium Entry Luigi Sbano, Massimo Bonora, Saverio Marchi, Federica Baldassari, Diego L. Medina, Andrea Ballabio, Carlotta Giorgi

More information

Supplementary materials for: Executive control processes underlying multi- item working memory

Supplementary materials for: Executive control processes underlying multi- item working memory Supplementary materials for: Executive control processes underlying multi- item working memory Antonio H. Lara & Jonathan D. Wallis Supplementary Figure 1 Supplementary Figure 1. Behavioral measures of

More information

1. Materials and Methods 1.1 Animals experiments process The experiments were approved by the Institution Animal Ethics Committee of Jilin University

1. Materials and Methods 1.1 Animals experiments process The experiments were approved by the Institution Animal Ethics Committee of Jilin University 1. Materials and Methods 1.1 Animals experiments process The experiments were approved by the Institution Animal Ethics Committee of Jilin University (Reference NO. 2015-003). 96 Kunming (KM) mice (8 weeks;

More information

Supplemental information Acid-sensing ion channel 1a contributes to hippocampal LTP inducibility through multiple mechanisms

Supplemental information Acid-sensing ion channel 1a contributes to hippocampal LTP inducibility through multiple mechanisms Supplemental information Acid-sensing ion channel 1a contributes to hippocampal LTP inducibility through multiple mechanisms Ming-Gang Liu, Hu-Song Li, Wei-Guang Li, Yan-Jiao Wu, Shi-Ning Deng, Chen Huang,

More information

EEG Arousals: Scoring Rules and Examples. A Preliminary Report from the Sleep Disorders Atlas Task Force of the American Sleep Disorders Association

EEG Arousals: Scoring Rules and Examples. A Preliminary Report from the Sleep Disorders Atlas Task Force of the American Sleep Disorders Association EEG Arousals: Scoring Rules and Examples A Preliminary Report from the Sleep Disorders Atlas Task Force of the American Sleep Disorders Association Sleep in patients with a number of sleep disorders and

More information

Chromatin IP (Isw2) Fix soln: 11% formaldehyde, 0.1 M NaCl, 1 mm EDTA, 50 mm Hepes-KOH ph 7.6. Freshly prepared. Do not store in glass bottles.

Chromatin IP (Isw2) Fix soln: 11% formaldehyde, 0.1 M NaCl, 1 mm EDTA, 50 mm Hepes-KOH ph 7.6. Freshly prepared. Do not store in glass bottles. Chromatin IP (Isw2) 7/01 Toshi last update: 06/15 Reagents Fix soln: 11% formaldehyde, 0.1 M NaCl, 1 mm EDTA, 50 mm Hepes-KOH ph 7.6. Freshly prepared. Do not store in glass bottles. 2.5 M glycine. TBS:

More information

RayBio Human Phospho-DDR2 (Tyr740) and Total DDR2 ELISA Kit

RayBio Human Phospho-DDR2 (Tyr740) and Total DDR2 ELISA Kit RayBio Human Phospho-DDR2 (Tyr740) and Total DDR2 ELISA Kit Catalog #: PEL-DDR2-Y740-T User Manual Last revised March 22, 2018 Caution: Extraordinarily useful information enclosed ISO 13485 Certified 3607

More information

EEG History. Where and why is EEG used? 8/2/2010

EEG History. Where and why is EEG used? 8/2/2010 EEG History Hans Berger 1873-1941 Edgar Douglas Adrian, an English physician, was one of the first scientists to record a single nerve fiber potential Although Adrian is credited with the discovery of

More information

Dental Research Institute, Faculty of Dentistry, University of Toronto, Toronto, Canada *For correspondence:

Dental Research Institute, Faculty of Dentistry, University of Toronto, Toronto, Canada *For correspondence: Zymogram Assay for the Detection of Peptidoglycan Hydrolases in Streptococcus mutans Delphine Dufour and Céline M. Lévesque * Dental Research Institute, Faculty of Dentistry, University of Toronto, Toronto,

More information

Entrainment of neuronal oscillations as a mechanism of attentional selection: intracranial human recordings

Entrainment of neuronal oscillations as a mechanism of attentional selection: intracranial human recordings Entrainment of neuronal oscillations as a mechanism of attentional selection: intracranial human recordings J. Besle, P. Lakatos, C.A. Schevon, R.R. Goodman, G.M. McKhann, A. Mehta, R.G. Emerson, C.E.

More information

SUPPLEMENTARY INFORMATION

SUPPLEMENTARY INFORMATION doi:10.1038/nature10776 Supplementary Information 1: Influence of inhibition among blns on STDP of KC-bLN synapses (simulations and schematics). Unconstrained STDP drives network activity to saturation

More information

Brain and Cognitive Sciences 9.96 Experimental Methods of Tetrode Array Neurophysiology IAP 2001

Brain and Cognitive Sciences 9.96 Experimental Methods of Tetrode Array Neurophysiology IAP 2001 Brain and Cognitive Sciences 9.96 Experimental Methods of Tetrode Array Neurophysiology IAP 2001 An Investigation into the Mechanisms of Memory through Hippocampal Microstimulation In rodents, the hippocampus

More information

HCC1937 is the HCC1937-pcDNA3 cell line, which was derived from a breast cancer with a mutation

HCC1937 is the HCC1937-pcDNA3 cell line, which was derived from a breast cancer with a mutation SUPPLEMENTARY INFORMATION Materials and Methods Human cell lines and culture conditions HCC1937 is the HCC1937-pcDNA3 cell line, which was derived from a breast cancer with a mutation in exon 20 of BRCA1

More information

RayBio Human Phospho-DDR1 (Tyr792) ELISA Kit

RayBio Human Phospho-DDR1 (Tyr792) ELISA Kit RayBio Human Phospho-DDR1 (Tyr792) ELISA Kit Catalog #: PEL-DDR1-Y792 User Manual Last revised March 22, 2018 Caution: Extraordinarily useful information enclosed ISO 13485 Certified 3607 Parkway Lane,

More information

mtorc2 controls actin polymerization required for consolidation of long-term memory

mtorc2 controls actin polymerization required for consolidation of long-term memory CORRECTION NOTICE Nat. Neurosci.; doi:1.138/nn.3351 mtorc2 controls actin polymerization required for consolidation of long-term memory Wei Huang, Ping Jun Zhu, Shixing Zhang, Hongyi Zhou, Loredana Stoica,

More information

The individual animals, the basic design of the experiments and the electrophysiological

The individual animals, the basic design of the experiments and the electrophysiological SUPPORTING ONLINE MATERIAL Material and Methods The individual animals, the basic design of the experiments and the electrophysiological techniques for extracellularly recording from dopamine neurons were

More information

Electromyography II Laboratory (Hand Dynamometer Transducer)

Electromyography II Laboratory (Hand Dynamometer Transducer) (Hand Dynamometer Transducer) Introduction As described in the Electromyography I laboratory session, electromyography (EMG) is an electrical signal that can be recorded with electrodes placed on the surface

More information

Essential Medium, containing 10% fetal bovine serum, 100 U/ml penicillin and 100 µg/ml streptomycin. Huvec were cultured in

Essential Medium, containing 10% fetal bovine serum, 100 U/ml penicillin and 100 µg/ml streptomycin. Huvec were cultured in Supplemental data Methods Cell culture media formulations A-431 and U-87 MG cells were maintained in Dulbecco s Modified Eagle s Medium. FaDu cells were cultured in Eagle's Minimum Essential Medium, containing

More information

RayBio Human Phospho-DDR1 (Tyr792) and Total DDR1 ELISA Kit

RayBio Human Phospho-DDR1 (Tyr792) and Total DDR1 ELISA Kit RayBio Human Phospho-DDR1 (Tyr792) and Total DDR1 ELISA Kit Catalog #: PEL-DDR1-Y792-T User Manual Last revised March 22, 2018 Caution: Extraordinarily useful information enclosed ISO 13485 Certified 3607

More information

Outline of Talk. Introduction to EEG and Event Related Potentials. Key points. My path to EEG

Outline of Talk. Introduction to EEG and Event Related Potentials. Key points. My path to EEG Outline of Talk Introduction to EEG and Event Related Potentials Shafali Spurling Jeste Assistant Professor in Psychiatry and Neurology UCLA Center for Autism Research and Treatment Basic definitions and

More information