WRLFMD Quarterly Report July-September 2011

Transcription

1 WRLFMD Quarterly Report July-September 2011 Reference Laboratory Contract Report 26/10/2011 WRLFMD

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3 OIE/FAO Reference Laboratory Report 1,2 July-September 2011 Foot-and-Mouth Disease 1 N.B. The content of this report is the property of WRLFMD, IAH-Pirbright. For presentation, publication or any other public use, please contact Dr. Jef Hammond, IAH-Pirbright, jef.hammond@iah.ac.uk. 2 Copies of all the individual reports cited herein can be obtained from Dr. Jef Hammond, IAH-Pirbright, jef.hammond@iah.ac.uk. 3

4 Summary ASIA Israel Following 12 outbreaks of FMD type O in the Hazafon/Haifa and Hadarom areas between April and June 2011, six further outbreaks were reported in the Hazafon area at Shamir, Tsefat (24/06/2011), Shirion Junction, Golan (30/06/2011), Orcha Junction, Golan (18/07/2011), Devora, Yizreel (10/07/2011), Dalton, Tsefat (10/07/2011) and Mi'elya, Acco (26/07/2011). All outbreaks involved only cattle. Viruses isolated at the WRLFMD all belonged to the ME-SA topotype, PanAsia-2 ANT-10 lineage (see report below). Kazakhstan An outbreak of FMD O occurred in cattle on the 11/08/2011 at Karashilik, Kurchumskiy, East Kazakhstan. A sample was submitted to the FGI-ARRIAH and the VP1 sequence provided to the WRLFMD. Phylogenetic analysis showed the sequence to belong to the ME-SA topotype, PanAsia lineage and was closely related to sequences obtained from viruses occurring in Vietnam and P.R. China (Guizhou province) (see report below). P.R. China Three further outbreaks of FMD type O have been reported: on 13/07/2011 at Longfeng Village, Pudi, Bijie, Guizhou in cattle/sheep/goats/pigs; on 31/08/2011 at Liebugou, Lengda Village, Jiacha, Shannan, Tibet in cattle; and on 30/09/2011 at Duixu Village, Zhongda Town, Lang, Linzhi, Tibet in cattle. No sequence data has been reported. Dzauskom region, South Ossetia / Tskhinvali Region Georgia (disputed) An outbreak of FMD type O occurred in cattle on 05/08/2011. Laboratory diagnosis took place at the FGI- ARRIAH and the VP1 sequence was provided to the WRLFMD. The virus belonged to the ME-SA topotype, PanAsia-2 ANT-10 lineage (see report below) Taiwan POC Two new outbreaks of FMD type O were detected by serology on 11/07/2011 (Yingge District, T'ai-pei) and 26/07/2011 (Shigang District, T'ai-nan); both were in pigs. No viruses were detected. AFRICA Botswana A new outbreak of FMD was reported in cattle at Itoto, Okavango, Ngamiland, Maun (17/09/2011); typing and genetic analysis by the regional reference laboratory is awaited. SOUTH AMERICA Paraguay FMD type O was found in cattle on 17/09/2011 at Sargento Loma, San Pedro department. FMD previous occurred in July No phylogenetic analysis is yet available. Uncharacterised FMD viruses A number of other outbreaks have occurred where samples have not been sent to the WRLFMD. It is probable that the countries involved have performed their own genetic characterisation; however, through the OIE/FAO laboratory network we would also like to encourage the submission of samples (or complete VP1 sequences) to the WRLFMD. An up-to-date list and reports of FMD viruses characterised by sequencing can be found at the following website: 4

5 WRLFMD vaccine recommendations have not changed from the previous report (Annex 3). However, a recently available PanAsia 2 vaccine is being tested in WRLFMD vaccine matching assays and its ability to match current field strains will be carefully monitored and reported in due course. A careful watch is being maintained for further outbreaks of Asia 1and any isolates obtained will be tested for vaccine matching as rapidly as possible including the recent isolates from Turkey. Results from samples received at WRLFMD (status of samples being tested) are shown in Table 1 and a complete list of clinical sample diagnostics made by the WRLFMD between July and September 2011 is shown in Annex 1 Table A. A record of all samples received to IAH-Pirbright (July to September 2011) is shown in Annex 1 Table B. Table 1: Status of sequencing of samples received by the WRLFMD from July to September Batch Date Recd. Country Serotype No. of sequences Status WRLFMD/2011/ /07/2011 Kuwait O 2 Completed WRLFMD/2011/ /07/2011 Thailand O 6 Completed WRLFMD/2011/ /07/2011 Thailand A 11 Completed WRLFMD/2011/ /07/2011 Vietnam O 6 Completed WRLFMD/2011/ /07/2011 Vietnam A 1 Completed WRLFMD/2011/ /07/2011 Cambodia O 2 Completed WRLFMD/2011/ /07/2011 Laos O 4 Completed WRLFMD/2011/ /07/2011 Sri Lanka O 2 Completed WRLFMD/2011/ /09/2011 Israel O 13 Completed WRLFMD/2011/ /09/2011 Hong Kong SAR, PRC O 5 Completed WRLFMD/2011/ /09/2011 Turkey O 3 Sequencing in progress WRLFMD/2011/ /09/2011 Turkey A+O 1 Sequencing in progress WRLFMD/2011/ /09/2011 Turkey A 17 Sequencing in progress WRLFMD/2011/ /09/2011 Turkey Asia 1 3 Sequencing in progress WRLFMD/2011/ /09/2011 Democratic Republic of the Congo Total 76 VI & typing in progress 5

6 . Detailed Analysis: ASIA Israel WRLFMD/2011/00038 Date received: 08/09/2011 No. of samples: 17 O: 13 Topotype: ME-SA Lineage: PanAsia-2 ANT-10 FMDV-GD: 2 NVD: 2 22 O FMDV-GD NVD 40 km 20 mi Location not found Daniel Dalet / d-maps.com Tel Aviv South North Center Jerusalem O/IRN/88/2009 O/IRN/39/2010 O/IRN/38/2010 O/IRN/37/2010 O/IRN/34/2010 O/IRN/33/2010 O/IRN/20/2010 O/IRN/142/2010 O/IRN/101/2010 O/IRN//2010 O/IRN/59/2010 O/IRN/65/2010 O/IRN/86/2010 O/IRN/89/2010 O/IRN/90/2010 O/IRN/91/2010 O/AFG/217/2010 O/AFG/219/ O/AFG/221/2010 O/IRN/4/2010 O/IRN/30/2010 O/PAK/3/2010 O/PAK/4/2010 O/IRN/2/2010 O/IRN/11/2010 O/PAK/7/ O/PAK/14/2010 O/AFG/242/2010 ANT-10 O/PAK/1/ O/PAK/2/2010 O/PAK/5/2010 O/PAK/8/2010 O/ISR/1/2011 O/ISR/2/2011 O/ISR/4/2011 O/KUW/1/2011 O/KUW/2/2011 O/ISR/9/2011 O/ISR/22/ O/ISR/7/2011 O/ISR/5/2011 O/ISR/6/ O/ISR/16/2011 O/ISR/24/2011 O/ISR/11/2011 O/ISR/12/2011 O/ISR/13/2011 O/ISR/17/2011 O/ISR/26/2011 O/ISR/8/2011 O/ISR/21/2011 O/ISR/23/2011 O/ISR/14/2011 O/ISR/15/2011 O/ISR/25/2011 O/PAK/16/2010 PUN-10 O/IRN/31/2009 FAR-09 O/IRN/18/2010 BAL-09 O/IRN/8/2005 O/TUR/257/2008* (FMDI) TER-08 O/TUR/264/2009* (FMDI) SAN-09 PanAsia Irn-2001 Ind-2001 Pak- O/IND/53/79 (AF292107) O/IND/R2/75* (AF204276) O1/Manisa/TUR/69 (AY593823) SEA EA-2 EA-3 EA-4 WA EA-1 CATHAY ISA-1 ISA-2 PanAsia-2 ME-SA

7 WRLFMD Quarterly Report July-September Kazakhstan Date: 11/08/2011 Location: Karashilik, Kurchumskiy, East Kazakhstan O: 1 (VP1 sequence provided by FGI-ARRIAH) Topotype: ME-SA Lineage: PanAsia O/VIT/7/2011 North Kazakhstan O/VIT/8/2011 O/CHA/7/2011* (JF837375) O/VIT/12/2011 O/VIT/9/2011 West Kazakhstan Atyrau Aktobe Kostanay Akmola Karagandy Pavlodar East Kazakhstan O/VIT/4/2011 O/VIT/2/2011 O/VIT/21/2011 O/VIT/10/2011 O/VIT/11/2011 O/VIT/22/2011 O/LAO/2/2010 O/VIT/26/2011 O/VIT/34/2011 O/VIT/35/2011 O/Kazakhstan/Aug2011 (ARRIAH) O/VIT/17/2011 O/VIT/5/2011 O/VIT/6/2011 O/VIT/16/2011 O/VIT/37/2011 Mangystau Kyzylorda Zhambyl Almaty O/VIT/14/2011 O/VIT/13/2011 O/VIT/36/2011 O/VIT/15/2011 O/VIT/27/2011 O/VIT/30/ km 200 mi Daniel Dalet / d-maps.com South Kazakhstan O/VIT/16/2010 O/VIT/29/2011 O/VIT/31/2011 O/VIT/25/2011 O/VIT/28/2011 O/VIT/3/2011 O/VIT/32/2011 O/CAM/4/2010 O/VIT/23/2011 O/VIT/4/2010 O/CAM/3/2010 PanAsia O/CAM/6/2010 O/CAM/1/2010 O/CAM/2/2010 O/VIT/13/2010 O/VIT/15/2010 O/VIT/22/2010 O/VIT/1/2011 ME-SA O/VIT/11/2010 O/VIT/10/2010 O/VIT/3/2010 O/VIT/9/2010 O/VIT/19/2010 O/VIT/14/2010 O/VIT/6/2010 O/VIT/5/2011 O/VIT/6/2011 O/VIT/16/2011 O/VIT/12/2011 O/VIT/9/2011 O/VIT/4/ O/VIT/37/2011 O/VIT/7/2011 O/LAO/2/2010 O/VIT/8/2011 O/CHA/7/2011* (JF837375) O/VIT/2/2011 O/VIT/22/2011 O/VIT/26/ O/VIT/17/2011 O/VIT/14/2011 O/VIT/13/2011 O/VIT/36/2011 O/VIT/21/2011 O/VIT/34/2011 O/VIT/35/2011 O/VIT/10/2011 O/VIT/11/2011 O/Kazakhstan/Aug2011 (ARRIAH) O/VIT/7/2010 O/VIT/8/2010 O/VIT/12/2010 O/CAM/5/2010 O/CAM/8/2010 O/LAO/1/2011 O/LAO/2/2011 O/VIT/20/2010 O/VIT/21/2010 O/VIT/23/2010 O/TAI/7/2011 O/VIT/17/2005 (HQ116283) O/CAM/4/2006 (HQ116172) O/CAM/5/2006 (HQ116173) O/VIT/14/2002 (DQ165026) O/VIT/1/2003 (DQ165030) O/VIT/20/2002 (DQ165029) O/NEP/4/ (DQ164935) O/Tibet/CHA/3/ O/UKG/35/2001 (AJ539141) O/TAW/2/ (AJ2927) O/TAW/KM/* (AHRI) O/IRN/18/2010 O/IRN/31/2009 O/PAK/16/2010 O/South Ossetia/2011 (ARRIAH) O/IRN/88/2009 O/IRN/8/2005 O/TUR/257/2008* (FMDI) O/TUR/264/2009* (FMDI) Irn-2001 Ind-2001 Pak- O/IND/53/79 (AF292107) O/IND/R2/75* (AF204276) O1/Manisa/TUR/69 (AY593823) SEA EA-2 PanAsia-2 EA-3 EA-4 WA EA-1 CATHAY ISA-1 ISA-2 7

8 Kuwait 88 O/BUL/19/2011 O/BUL/20/2011 WRLFMD/2011/00032 Date received: 18/07/2011 No. of samples: 2 O: 2 Topotype: ME-SA Lineage: PanAsia-2 ANT O/BUL/27/2011 O/BUL/26/2011 O/BUL/25/2011 O/BUL/23/2011 O/BUL/15/2011 O/BUL/14/2011 O/BUL/13/2011 O/BUL/11/2011 O/BUL/10/2011 O/ISR/1/2011 O/ISR/2/2011 O/ISR/4/2011 O/BUL/1/2010 O/BUL/3/2011 O/BUL/4/2011 O/BUL/5/2011 O/BUL/6/2011 O/BUL/7/2011 O/TUR/18/2010 O/TUR/840/2010* (FMDI) O/TUR/868/2010* (FMDI) O/TUR/883/2010* (FMDI) O/TUR/926/2010* (FMDI) O/TUR/3/2010* (FMDI) O/TUR/1086/2010* (FMDI) O/TUR/10/2010* (FMDI) O/TUR/1410/2010* (FMDI) O/IRN/175/ O/IRN/204/2010 O/TUR/29/2010 O/IRN//2010 O/TUR/12/2010 O/IRN//2010 O/TUR/23/2010 O/TUR/153/2010* (FMDI) O/TUR/154/2010* (FMDI) O/IRN/114/2010 Al Jahra Al Asimah (Al Kuwayt) 79 O/IRN/29/2011 O/IRN/104/2010 O/IRN/184/2010 O/TUR/27/2010 O/TUR/30/2010 O/TUR/36/2010 O/TUR/39/2010 O/IRN/92/2010 O/IRN/180/2010 Al Farwaniyah KUW/1/2011 KUW/2/2011 Hawalli Mubarak Al-Kabeer O/IRN/64/2010 O/AFG/59/2010 O/AFG/61/2010 O/AFG/89/2010 O/PAK/5/2010 O/PAK/8/2010 O/PAK/2/2010 O/PAK/1/2010 O/AFG/242/2010 O/IRN/13/2010 O/IRN/11/2010 ANT-10 PanAsia-2 O/IRN/12/2010 O/IRN/2/2010 ME-SA O/IRN/173/2010 O/AFG/119/2010 O/PAK/3/2010 O/IRN/4/2010 O/IRN/14/ km Al Ahmadi 80 O/PAK/4/2010 O/IRN/30/2010 O/PAK/7/2010 O/PAK/14/2010 O/IRN/160/2010 O/IRN/90/2010 O/IRN/37/ mi Daniel Dalet / d-maps.com 88 O/AFG/219/2010 O/AFG/221/2010 O/AFG/217/2010 O/IRN/91/2010 O/IRN/38/2010 O/IRN//2010 O/IRN/15/2010 O/IRN/39/2010 O/IRN/101/2010 O/IRN/137/2010 O/IRN/59/2010 O/IRN/142/2010 O/IRN/154/2010 O/IRN/155/2010 O/IRN/65/ O/ISR/5/2011 O/ISR/6/2011 O/ISR/7/2011 O/ISR/9/2011 O/KUW/1/2011 O/KUW/2/2011 O/ISR/8/ O/IRN/20/2010 O/IRN/88/2009 O/IRN/89/2010 O/IRN/34/2010 O/IRN/33/2010 O/IRN/158/2010 O/IRN/86/2010 O/AFG/104/2010 O/KUW/1/2011 O/KUW/2/2011 O/ISR/5/2011 O/ISR/6/2011 O/ISR/7/2011 O/ISR/8/2011 O/ISR/9/2011 O/IRN/8/2005 O/PAK/16/2010 O/KUW/1/2008 O/KUW/3/2008 O/IRN/31/2009 O/IRN/18/2010 PUN-10 FAR-09 BAL-09 O/ISR/1/2008 O/KUW/9/ O/TUR/257/2008* (FMDI) O/TUR/264/2009* (FMDI) O/UKG/35/2001 (AJ539141) TER-08 SAN-09 PanAsia O/IRN/61/2001 (DQ1648) Irn Ind-2001 O/PAK/16/2003 (DQ165068) Pak- 76 O/IND/53/79 (AF292107) O/IND/R2/75* (AF204276) O1/Manisa/TUR/69 (AY593823) SEA EA-2 EA-3 EA-4 WA EA-1 CATHAY ISA-1 ISA

9 Hong Kong SAR, P.R. China WRLFMD/2011/00039 Date received: 15/09/2011 No. of samples: 5 O: 5 Topotype: CATHAY Lineage: unnamed (No locations given) O/HKN/3/2008 O/HKN/7/2011 O/HKN/5/2011 O/HKN/3/2011 O/HKN/4/2011 O/HKN/6/2011 O/HKN/26/2010 O/HKN/4/2008 O/HKN/1/2008 O/HKN/2/2008 O/HKN/2/2009 O/HKN/1/2009 O/HKN/3/2007 O/HKN/4/2007 O/HKN/1/2006 O/HKN/2/2006 O/HKN/4/2006 O/HKN/5/2006 O/HKN/6/2006 O/HKN/24/2005 O/HKN/3/2006 O/HKN/22/2005 O/HKN/23/2005 O/HKN/25/2005 O/HKN/19/2005 O/HKN/20/2005 O/HKN/17/2005 O/HKN/18/2005 O/HKN/14/2005 O/HKN/12/2005 O/HKN/15/2005 O/HKN/9/2004 (DQ164886) O/HKN/9/2005 O/HKN/10/2005 O/HKN/12/2004 (DQ164889) O/HKN/3/2004 (DQ164881) O/HKN/8/2004 (DQ164885) O/HKN/11/2004 (DQ164888) O/HKN/6/2004 (DQ164883) O/HKN/4/2004 (DQ164882) O/HKN/7/2004 (DQ164884) O/HKN/10/2004 (DQ164887) O/HKN/13/2004 O/HKN/2/2003 (DQ164879) O/HKN/3/2003 (DQ164880) O/HKN/19/2001 (DQ164876) O/HKN/3/2002 (DQ1648) O/HKN/1/2002 (DQ164877) O/HKN/2002 (AF525458) O/HKN/4/2001 (DQ164875) O/HKN/1/ O/PHI/7/ (AJ2926) O/Yunlin/TAW/ (AF308157) 83 O/HKN/6/83 (AJ2919) O/HKN/21/70 (AJ2911) ISA-2 ISA-1 EA-3 EA-1 81 WA EA-4 EA-2 SEA 83 ME-SA CATHAY

10 WRLFMD Quarterly Report July-September Cambodia WRLFMD/2011/00035 Date received: 28/07/2011 No. of samples: 4 O: 2 Topotype: ME-SA Lineage: PanAsia FMDV-GD: 2 BANTEAY MEANCHEY ODDAR MEANCHEY 6 7 SIEM REAP PREAH VIHEAR STUNG TRENG RATANAKIRI Pak- SEA O1/Manisa/TUR/69 (AJ251477) O/IND/53/79 (AF292107) O/IND/R2/75* (AF204276) PanAsia-2 Sri Lanka Irn-2001 Ind-2001 O/CAM/1/2004 (HQ116171) PAILIN BATTAMBANG KAMPONG THOM KRATIE MONDOLKIRI O/VIT/5/05* (TRRL) O/VIT/7/2004 (HQ116274) O/VIT/8/05* (TRRL) O/VIT/8/2004 (HQ116275) O/VIT/7/2005 (HQ116280) O/CAM/1/2008 (HQ116174) PURSAT KOH KONG SIHANOUKVILLE KAMPONG CHHNANG KAMPONG SPEU KAMPOT 8 Phnom Penh KAMPONG CHAM 1 PREY KANDAL VENG SVAY RIENG TAKEO O (2010) GD (2010) GD (2011) Daniel Dalet / d-maps.com 60 km 40 mi O/LAO/17/2003 (DQ164912) O/LAO/2/2006 (2003)(EU667451) O/LAO/19/2003 (DQ164913) O/LAO/20/2003 (EU667449) O/LAO/26/2003 (EU667436) O/VIT/1/2004 (DQ165032) O/LAO/31/2003 (DQ164918) O/LAO/3/2006 (2004)(EU667452) O/LAO/4/2006 (2004)(EU667453) O/LAO/22/2003 (EU667434) O/LAO/23/2003 (DQ164915) O/LAO/28/2003 (DQ164916) O/LAO/30/2003 (DQ164917) O/LAO/21/2003 (DQ164914) O/LAO/5/2006 (2003)(EU667454) O/LAO/12/2003 (DQ164910) O/LAO/24/2003 (EU667435) O/LAO/13/2003 (DQ164911) O/LAO/11/2003 (DQ164909) O/LAO/3/2003 (DQ164908) O/LAO/6/2003 (EU667447) O/LAO/34/2003 O/TAI/7/2011 O/VIT/21/2010 O/VIT/23/2010 O/VIT/20/2010 O/LAO/1/ O/LAO/2/2011 O/VIT/7/2010 O/VIT/8/2010 O/VIT/6/2010 O/VIT/23/2011 O/CAM/4/2010 O/VIT/9/ O/VIT/19/2010 O/VIT/14/2010 O/VIT/3/2010 O/VIT/1/2011 O/VIT/10/2010 O/VIT/11/2010 O/VIT/15/2010 O/VIT/22/2010 O/CAM/5/2010 O/CAM/8/2010 O/CAM/2/2010 O/VIT/13/2010 O/CAM/1/2010 O/CAM/3/2010 O/CAM/6/2010 O/VIT/4/2010 O/VIT/12/2010 O/VIT/3/2011 O/VIT/32/2011 O/VIT/30/ O/VIT/34/2011 O/VIT/35/2011 O/CHA/7/2011* (JF837375) O/VIT/12/2011 O/VIT/9/2011 O/VIT/4/2011 O/VIT/26/2011 O/LAO/2/2010 O/VIT/2/2011 O/VIT/21/2011 O/VIT/10/2011 O/VIT/11/2011 O/VIT/22/2011 O/VIT/7/2011 O/VIT/8/2011 O/VIT/15/2011 O/VIT/27/2011 O/VIT/25/2011 O/VIT/31/2011 O/VIT/29/2011 O/VIT/28/2011 O/VIT/16/2010 O/VIT/6/2011 O/VIT/16/2011 O/VIT/5/2011 O/VIT/17/2011 O/VIT/13/2011 O/VIT/14/2011 O/VIT/36/2011 O/VIT/37/2011 O/VIT/3/2005 (HQ116277) O/VIT/3/05* (TRRL) O/CAM/2/2000 (AJ318828) O/CAM/4/2000 (AJ318829) O/TAI/9/ (DQ1648) O/TAW/2/ (AJ2927) O/UKG/35/2001 (AJ539141) O/LAO/11/ (EU667443) O/MAY/2/2000 (AJ318846) O/TAI/1/2000 O/LAO/1/ (EU667441) O/LAO/1/2000 (EU667444) O/LAO/2/2000 (AJ318844) O/TAI/2/2003 (DQ1640) O/CAM/4/2006 (HQ116172) O/CAM/5/2006 (HQ116173) O/VIT/17/2005 (HQ116283) O/TAI/7/2011 O/VIT/21/2010 O/VIT/23/2010 O/VIT/20/2010 O/LAO/1/2011 O/LAO/2/2011 O/VIT/7/2010 O/VIT/8/2010 O/VIT/6/2010 O/VIT/23/2011 O/CAM/4/2010 O/VIT/9/2010 O/VIT/19/2010 O/VIT/14/2010 O/VIT/3/2010 O/VIT/1/2011 O/VIT/10/2010 O/VIT/11/2010 O/VIT/15/2010 O/VIT/22/2010 O/CAM/5/2010 O/CAM/8/2010 O/CAM/2/2010 O/VIT/13/2010 O/CAM/1/2010 O/CAM/3/2010 O/CAM/6/2010 O/VIT/4/2010 O/VIT/12/2010 O/VIT/3/2011 O/VIT/32/2011 O/VIT/30/2011 O/VIT/34/2011 O/VIT/35/2011 O/CHA/7/2011* (JF837375) O/VIT/12/2011 O/VIT/9/2011 O/VIT/4/2011 O/VIT/26/2011 O/LAO/2/2010 O/VIT/2/2011 O/VIT/21/2011 O/VIT/10/2011 O/VIT/11/2011 O/VIT/22/2011 O/VIT/7/2011 O/VIT/8/2011 O/VIT/15/2011 O/VIT/27/2011 O/VIT/25/2011 O/VIT/31/2011 O/VIT/29/2011 O/VIT/28/2011 O/VIT/16/2010 O/VIT/6/2011 O/VIT/16/2011 O/VIT/5/2011 O/VIT/17/2011 O/VIT/13/2011 O/VIT/14/2011 O/VIT/36/2011 O/VIT/37/2011 EA-3 EA-2 EA-4 WA EA-1 ISA-2 ISA-1 CATHAY PanAsia ME-SA

11 O/TAI/23/2009 (HQ116270) O/VIT/2/2010 O/TAI/19/2009 (HQ116266) O-GD/MAY/29/2009 O/LAO/1/2010 O-GD/MAY/25/ O-GD/MAY/26/2009 O/MAY/20/2009 (HQ116218) O/MAY/21/2009 (HQ116219) 82 O-GD/MAY/23/ O-GD/MAY/24/2009 O-GD/MAY/27/2009 O-GD/MAY/22/2009 O/TAI/13/2009 (HQ116261) O/TAI/15/2009 (HQ116262) O/TAI/16/2009 (HQ116263) O/TAI/12/2009 (HQ116260) O/TAI/17/2009 (HQ116264) O-GD/MAY/7/2010 O/MOG/CO3/2010* (ARRIAH) 74 O/MOG/6/2010 O/MOG/9/ O/MOG/7/2010 O/MOG/5/2010 O/RUS/Aug 2010 (ARRIAH) O/MOG/1/2010 O/MOG/2/2010 O/MOG/3/2010 O/MOG/4/2010 O/TAI/4/2011 O/TAI/2/2011 O/TAI/5/2011 O/MAY/8/2009 (HQ116216) O/TAI/18/2009 (HQ116265) O/LAO/1/2009 (HQ116182) O/TAI/3/2009 (HQ116258) O-GD/MAY/10/2010 O-GD/MAY/11/2010 O/MYA/2/2008 (HQ116226) O/MYA 1/08* (TRRL) O/TAI 43/08* (TRRL) 82 O/LAO/2/2008 (HQ116180) O/LAO/3/2008 (HQ116181) O/TAI 40/08* (TRRL) O/TAI 41/08* (TRRL) O/TAI/5/2008 (HQ116252) O/TAI 44/08* (TRRL) O/TAI/7/2008 (HQ116254) O/TAI 75/08* (TRRL) O/TAI/3/2008 (HQ116251) O/TAI/2/2008 (HQ116250) O/TAI 55/08* (TRRL) O/TAI/1/2009 (HQ116256) O/TAI/4/2009 (HQ116259) O/TAI/6/2008 (HQ116253) O/TAI/2/2009 (HQ116257) O/TAI/12/2008 (HQ116255) 80 O/TAI 60/08* (TRRL) O/TAI 5/08* (TRRL) 75 O/TAI 7/08* (TRRL) O/TAI/14/2007 (HQ116249) O/TAI/9/2007 (HQ116245) O/LAO/1/2007 (HQ116175) O/MAY/7/2007 (HQ116211) O/MAY/9/2007 (HQ116212) O/MAY/5/2007 (HQ116209) O/MYA/3/2008 (HQ116227) O/MAY/4/2007 (HQ116208) O/MAY/6/2007 (HQ116210) O/TAI/7/2007 (HQ116243) O/TAI/6/2007 (HQ116242) O/TAI/12/2007 (HQ116247) O/MAY/5/2009 (HQ116213) O/MAY/6/2009 (HQ116214) O/MAY/7/2009 (HQ116215) O/MYA/1/2009 O/MYA/9/2009 (HQ116230) O/MYA/12/2009 O-GD/MAY/28/2009 O/TAI/1/2010 O/TAI/20/2009 (HQ116267) O-GD/MAY/3/2010 O/TAI/25/2009 (HQ116272) O/TAI/21/2009 (HQ116268) O-GD/MAY/2/2010 O/TAI/24/2009 (HQ116271) O/TAI/26/2009 O/TAI/8/2005 (HQ116237) O/TAI/1/2005 (HQ116234) 83 O/TAI/21/05* (TRRL) O/TAI/10/2010 O-GD/MAY/12/2010 O/VIT/5/2010 O/VIT/18/2010 O/TAI/6/2010 O-GD/MAY/8/2010 O/TAI/4/2010 O/TAI/27/2009 O/TAI/2/2010 O/TAI/5/2010 O/TAI/3/2010 O-GD/MAY/13/2010 O/TAI/9/2010 O/MYA/7/2002 (DQ164928) O/MYA/4/2004 O/MYA/5/04* (TRRL) 70 O/MYA/2/2006 (HQ116225) O/MYA/3/2009 O/LAO/2/2001 (EU667445) 93 O/MAY/5/2001 (DQ164921) O/MAY/6/2001 (DQ164922) O/LAO/7/2003 (EU667448) O/LAO/4/2001 (DQ164907) O/LAO/1/2003 (EU667446) O/LAO/35/2003 (EU667450) O/VIT/6/2005 (HQ116279) O/MAY/1/2005 (HQ1161) O/MAY/2/2005 (HQ1161) 91 O/TAI/10/2007 (HQ116246) O/TAI/3/2003 (DQ1641) O/TAI/15/05* (TRRL) O/TAI/14/05* (TRRL) O/VIT/7/2006 (HQ116290) O/VIT/5/2006 (HQ116288) O/VIT/4/2006 (HQ116287) 77 O/VIT/6/2006 (HQ116289) 82 O/LAO/2/2007 (HQ116176) O/LAO/4/2007 (HQ1161) O/LAO/3/2007 (HQ116177) 73 O/LAO/1/2008 (HQ116179) O/TAI/4/2007 (HQ116240) O/TAI/5/2007 (HQ116241) O/TAI/13/2007 (HQ116248) O/MAY/5/2006 (HQ116207) 80 O/TAI/9/2005 (HQ116238) O/TAI/10/2005 (HQ116239) O/TAI/8/2007 (HQ116244) O/TAI/8/2004 (HQ116233) O/MAY/2/2001 (HQ116185) O/MAY/3/2001 (DQ164920) O/MYA/5/ (DQ164926) O/MYA/2/2000 (DQ164927) O/MYA/1/ (AJ303521) O/MYA/7/ (DQ164925) O/MYA/3/04* (TRRL) O/MYA/4/04* (TRRL) 87 O/MYA/1/2006 O/VIT/4/2005 (HQ1162) O/VIT/4/05* (TRRL) O/VIT/10/05* (TRRL) O/HLJOC12/03 (China) (DQ1143) 74 O/MOG/2004 (ARRIAH) O/VIT/6/05* (TRRL) 89 O/VIT/9/05* (TRRL) O/MYA/3/ O/MYA/1/04* (TRRL) O/MYA/2/04* (TRRL) 79 O/MYA/10/2009 (HQ116231) O/MYA/11/2009 (HQ116232) O/MYA/13/ O/VIT/NCVD-17/2010 (NVRQS) O/VIT/NCVD-18/2010 (NVRQS) O/VIT/NCVD-20/2010 (NVRQS) O/VIT/NCVD-19/2010 (NVRQS) 86 O-GD/MAY/30/ O/TAI/22/2009 (HQ116269) O/MYA/5/2009 (HQ116228) O/MYA/6/2009 (HQ116229) O/HKN/6/2010 O/HKN/18/2010 O/HKN/4/2010 O/HKN/1/ O/HKN/19/2010 O/HKN/20/2010 (HM2261) O/NC/CHA/2010 (HQ652080) O/VIT/NCVD-8/2010 (NVRQS) O/VIT/NCVD-9/2010 (NVRQS) O/SKR/4/2010 O/KOR/1/2010* (HM143846) O/MY/CHA/2010 (HQ652079) O/TZ/CHA/2010 (HQ652081) O/JPN/2010 (NIAH) O/CHA/31/2010* (JF792356) O/RUS/Jul 2010 (ARRIAH) O/DY/CHA/2010 (HQ6520) O/HKN/7/2010 O/HKN/8/2010 O/HKN/13/2010 O/HKN/14/ O/HKN/15/2010 O/HKN/9/2010 O/HKN/10/2010 O/HKN/11/2010 O/HKN/12/2010 O/TAI/189/87* (TRRL) O/MYA/1/2010 O/MYA/2/2010 Cam- ME-SA EA-3 EA-2 EA-4 WA EA-1 ISA-2 ISA-1 CATHAY Mya- SEA WRLFMD Quarterly Report July-September Laos (Lao People's Democratic Republic) WRLFMD/2011/00036 Date received: 28/07/2011 No. of samples: 4 O: 1 Topotype: SEA Lineage: Mya- O: 3 Topotype: ME-SA Lineage: PanAsia Luang Namtha Phongsali Bokeo Luang Hua2 Oudomxay Phan Phrabang Sainyabuli Vientiane Province Vientiane Prefecture Xieng 1 Khaung Bolikhamsai Khammouane Savannakhet 40 km Salavan Sekong 20 mi Daniel Dalet / d-maps.com Champasak 2 1 Attapeu SEA Pak- O1/Manisa/TUR/69 (AJ251477) O/IND/53/79 (AF292107) O/IND/R2/75* (AF204276) PanAsia O/TAI/23/2009 (HQ116270) O/VIT/2/2010 O/TAI/19/2009 (HQ116266) O-GD/MAY/29/2009 O/LAO/1/2010 O-GD/MAY/25/ O-GD/MAY/26/2009 O/MAY/20/2009 (HQ116218) O/MAY/21/2009 (HQ116219) 82 O-GD/MAY/23/ O-GD/MAY/24/2009 O-GD/MAY/27/2009 O-GD/MAY/22/2009 O/TAI/13/2009 (HQ116261) O/TAI/15/2009 (HQ116262) O/TAI/16/2009 (HQ116263) O/TAI/12/2009 (HQ116260) O/TAI/17/2009 (HQ116264) O-GD/MAY/7/2010 O/MOG/CO3/2010* (ARRIAH) 74 O/MOG/6/2010 O/MOG/9/ O/MOG/7/2010 O/MOG/5/2010 O/RUS/Aug 2010 (ARRIAH) O/MOG/1/2010 O/MOG/2/2010 O/MOG/3/2010 O/MOG/4/2010 O/TAI/4/2011 O/TAI/2/2011 O/TAI/5/2011 O/TAI/7/2011 O/VIT/21/2010 O/VIT/23/2010 O/VIT/20/2010 O/LAO/1/ O/LAO/2/2011 O/VIT/7/2010 O/VIT/8/2010 O/VIT/6/2010 O/VIT/23/2011 O/CAM/4/2010 O/VIT/9/ O/VIT/19/2010 O/VIT/14/2010 O/VIT/3/2010 O/VIT/1/2011 O/VIT/10/2010 O/VIT/11/2010 O/VIT/15/2010 O/VIT/22/2010 O/CAM/5/2010 O/CAM/8/2010 O/CAM/2/2010 O/VIT/13/2010 O/CAM/1/2010 O/CAM/3/2010 O/CAM/6/2010 O/VIT/4/2010 O/VIT/12/2010 O/VIT/3/2011 O/VIT/32/2011 O/VIT/30/ O/VIT/34/2011 O/VIT/35/2011 O/CHA/7/2011* (JF837375) O/VIT/12/2011 O/VIT/9/2011 O/VIT/4/2011 O/VIT/26/2011 O/LAO/2/2010 O/VIT/2/2011 O/VIT/21/2011 O/VIT/10/2011 O/VIT/11/2011 O/VIT/22/2011 O/VIT/7/2011 O/VIT/8/2011 O/VIT/15/2011 O/VIT/27/2011 O/VIT/25/2011 O/VIT/31/2011 O/VIT/29/2011 O/VIT/28/2011 O/VIT/16/2010 O/VIT/6/2011 O/VIT/16/2011 O/VIT/5/2011 O/VIT/17/2011 O/VIT/13/2011 O/VIT/14/2011 O/VIT/36/2011 O/VIT/37/ Sri Lanka Irn-2001 Ind-2001 O/CAM/1/2004 (HQ116171) O/VIT/5/05* (TRRL) O/VIT/7/2004 (HQ116274) O/VIT/8/05* (TRRL) O/VIT/8/2004 (HQ116275) O/VIT/7/2005 (HQ116280) O/CAM/1/2008 (HQ116174) O/LAO/17/2003 (DQ164912) O/LAO/2/2006 (2003)(EU667451) O/LAO/19/2003 (DQ164913) O/LAO/20/2003 (EU667449) O/LAO/26/2003 (EU667436) O/VIT/1/2004 (DQ165032) O/LAO/31/2003 (DQ164918) O/LAO/3/2006 (2004)(EU667452) O/LAO/4/2006 (2004)(EU667453) O/LAO/22/2003 (EU667434) O/LAO/23/2003 (DQ164915) O/LAO/28/2003 (DQ164916) O/LAO/30/2003 (DQ164917) O/LAO/21/2003 (DQ164914) O/LAO/5/2006 (2003)(EU667454) O/LAO/12/2003 (DQ164910) O/LAO/24/2003 (EU667435) O/LAO/13/2003 (DQ164911) O/LAO/11/2003 (DQ164909) O/LAO/3/2003 (DQ164908) O/LAO/6/2003 (EU667447) O/LAO/34/2003 O/VIT/3/2005 (HQ116277) O/VIT/3/05* (TRRL) O/CAM/2/2000 (AJ318828) O/CAM/4/2000 (AJ318829) O/TAI/9/ (DQ1648) O/TAW/2/ (AJ2927) O/UKG/35/2001 (AJ539141) O/LAO/11/ (EU667443) O/MAY/2/2000 (AJ318846) O/TAI/1/2000 O/LAO/1/ (EU667441) O/LAO/1/2000 (EU667444) O/LAO/2/2000 (AJ318844) O/TAI/2/2003 (DQ1640) O/CAM/4/2006 (HQ116172) O/CAM/5/2006 (HQ116173) O/VIT/17/2005 (HQ116283) O/TAI/7/2011 O/VIT/21/2010 O/VIT/23/2010 ME-SA O/VIT/20/2010 O/LAO/1/2011 O/LAO/2/2011 O/VIT/7/2010 O/VIT/8/2010 PanAsia O/VIT/6/2010 O/VIT/23/2011 O/CAM/4/2010 O/VIT/9/2010 O/VIT/19/2010 O/VIT/14/2010 O/VIT/3/2010 O/VIT/1/2011 O/VIT/10/2010 O/VIT/11/2010 O/VIT/15/2010 O/VIT/22/2010 O/CAM/5/2010 O/CAM/8/2010 O/CAM/2/2010 O/VIT/13/2010 O/CAM/1/2010 O/CAM/3/2010 O/CAM/6/2010 O/VIT/4/2010 O/VIT/12/2010 O/VIT/3/2011 O/VIT/32/2011 O/VIT/30/2011 O/VIT/34/2011 O/VIT/35/2011 O/CHA/7/2011* (JF837375) O/VIT/12/2011 O/VIT/9/2011 O/VIT/4/2011 O/VIT/26/2011 O/LAO/2/2010 O/VIT/2/2011 O/VIT/21/2011 O/VIT/10/2011 O/VIT/11/2011 O/VIT/22/2011 O/VIT/7/2011 O/VIT/8/2011 O/VIT/15/2011 O/VIT/27/2011 O/VIT/25/2011 O/VIT/31/2011 O/VIT/29/2011 O/VIT/28/2011 O/VIT/16/2010 O/VIT/6/2011 O/VIT/16/2011 O/VIT/5/2011 O/VIT/17/2011 O/VIT/13/2011 O/VIT/14/2011 O/VIT/36/2011 O/VIT/37/2011 EA-3 EA-2 EA-4 WA EA-1 ISA-2 ISA-1 CATHAY 11

12 South Ossetia / Georgia (disputed) Date: 05/08/2011 Location: Dzauskom region, South Ossetia / Tskhinvali Region, Georgia O: 1 (VP1 sequence provided by FGI-ARRIAH) Topotype: ME-SA Lineage: PanAsia ANT-10 O/IRN/104/2010 O/IRN/184/2010 O/IRN/114/2010 O/IRN/29/2011 O/TUR/23/2010 O/IRN/115/2010 O/TUR/153/2010* (FMDI) O/TUR/12/2010 O/IRN/127/2010 O/IRN//2010 O/IRN//2010 O/TUR/154/2010* (FMDI) O/IRN/175/ O/IRN/204/2010 O/TUR/27/2010 O/TUR/22/2010 O/TUR/29/2010 O/TUR/42/ O/TUR/4/2011 O/TUR/10/2010* (FMDI) O/TUR/18/2010 O/TUR/840/2010* (FMDI) O/TUR/868/2010* (FMDI) O/TUR/883/2010* (FMDI) O/TUR/926/2010* (FMDI) O/TUR/3/2010* (FMDI) O/TUR/1086/2010* (FMDI) O/TUR/1410/2010* (FMDI) O/BUL/1/2010 O/BUL/2/2010 O/BUL/3/2010 O/BUL/2/2010 (RS1) O/BUL/5/2011 ANT-10 O/BUL/6/2011 O/BUL/7/2011 O/TUR/39/2010 O/TUR/458/2010* (FMDI) PanAsia-2 O/IRN/66/2010 O/TUR/32/2010 O/TUR/1/2011 O/IRN/64/2010 ME-SA O/IRN/92/2010 O/IRN/82/2010 O/IRN/180/2010 O/IRN/136/ O/IRN/174/2010 O/IRN/132/2010 O/IRN/147/2010 O/IRN/150/2010 O/IRN/139/2010 O/IRN/35/2010 O/PAK/36/2010 O/AFG/59/2010 O/AFG/61/2010 O/AFG/89/2010 O/IRN/183/2010 O/IRN//2010 O/AFG/32/2010 O/AFG/110/2010 O/IRN/62/2010 O/AFG/34/2010 O/IRN/88/2009 O/IRN//2010 O/IRN/60/2010 O/South Ossetia/2011 (ARRIAH) O/TUR/257/2008* (FMDI) O/TUR/264/2009* (FMDI) O/IRN/8/2005 O/PAK/16/2010 O/IRN/31/2009 TER-08 SAN-09 PUN-10 FAR-09 O/IRN/18/2010 BAL-09 O/PAK/16/2003 (DQ165068) Pak- O/Kazakhstan/Aug2011 (ARRIAH) O/UKG/35/2001 (AJ539141) PanAsia Irn-2001 Ind-2001 O/IND/53/79 (AF292107) O/IND/R2/75* (AF204276) O1/Manisa/TUR/69 (AY593823) SEA EA-2 EA-3 EA-4 WA EA-1 CATHAY ISA-1 ISA-2 12

13 Sri Lanka WRLFMD/2011/00037 Date received: 28/07/2011 No. of samples: 2 O: 1 (2010) Topotype: ME-SA Lineage: unnamed O: 1 (2011) Topotype: ME-SA Lineage: PanAsia-2 SEA O/PAK/16/2003 (DQ165068) O1/Manisa/TUR/69 (AJ251477) O/IND/53/79 (AF292107) O/IND/R2/75* (AF204276) O/NEP/6/2003 (DQ165061) O-GD/NEP/2/2004 O/IRN/8/2005 O/NEP/2/2003 O/BHU/39/2004 (DQ164870) O/BHU/40/2004 (DQ165047) O/AFG/201/2004* (EF4575) O/BHU/33/2004 (DQ165046) O/PAK/9/2005 O/PAK/13/2005 O/AFG/120/2004* (EF4574) Northern O/MAY/6/2003 (DQ165058) 90 O/MAY/2/2004 (HQ1161) 93 O/MAY/3/2004 (HQ1161) PanAsia-2 O/IND/136/01* (PD-FMD) O/IND/151/01* (PD-FMD) O/IND/155/01* (PD-FMD) MAY/ O/IRN/88/2009 North Central O/IRN/31/2009 O/IRN/18/2010 O/TUR/257/2008* (FMDI) North Western 1 Central 1 Eastern 79 O/TUR/264/2009* (FMDI) O/PAK/16/2010 O/MAY/11/2009 (HQ116217) O/SRL/1/2011 O/SRL/4/ O/SRL/6/ O/SRL/1/ O/SRL/2/2000 O/SRL/8/ O/SRL/3/ 79 O/SRL/9/ O/SRL/2/ Western Uva 77 O/SRL/7/ O/SRL/1/2000 O/SRL/5/ O/SRL/1/2009 O/SRL/1/2010 O/IRN/61/2001 (DQ1648) O/BHU/3/2009 Irn-2001 ME-SA Daniel Dalet / d-maps.com km 60 mi Southern O/UAE/4/2008 O/KUW/3/ (DQ164904) O/OMN/7/2001 (DQ1641) O/CAM/1/2004 (HQ116171) Ind-2001 O/VIT/5/05* (TRRL) O/VIT/7/2004 (HQ116274) O/VIT/8/05* (TRRL) O/VIT/8/2004 (HQ116275) O/VIT/7/2005 (HQ116280) O/CAM/1/2008 (HQ116174) O/LAO/17/2003 (DQ164912) O/LAO/2/2006 (2003)(EU667451) O/LAO/19/2003 (DQ164913) O/LAO/20/2003 (EU667449) LAO/ ; VIT/2004 O/LAO/34/2003 O/VIT/3/2005 (HQ116277) O/VIT/3/05* (TRRL) O/CAM/2/2000 (AJ318828) O/CAM/4/2000 (AJ318829) O/TAI/9/ (DQ1648) O/TAW/2/ (AJ2927) O/UKG/35/2001 (AJ539141) O/LAO/11/ (EU667443) 88 O/MAY/2/2000 (AJ318846) O/TAI/1/2000 O/LAO/1/ (EU667441) O/LAO/1/2000 (EU667444) O/LAO/2/2000 (AJ318844) O/TAI/2/2003 (DQ1640) O/CAM/4/2006 (HQ116172) O/CAM/5/2006 (HQ116173) O/VIT/17/2005 (HQ116283) PanAsia 72 CAM/2010;VIT/ ;CHA,TAI,LAO/ EA-3 EA-2 EA-4 WA EA-1 ISA-2 ISA-1 CATHAY

14 O/TAI/23/2009 (HQ116270) O/VIT/2/2010 O/TAI/19/2009 (HQ116266) O-GD/MAY/29/2009 O/LAO/1/2010 O-GD/MAY/25/ O-GD/MAY/26/2009 O/MAY/20/2009 (HQ116218) O/MAY/21/2009 (HQ116219) 82 O-GD/MAY/23/ O-GD/MAY/24/2009 O-GD/MAY/27/2009 O-GD/MAY/22/2009 O/TAI/13/2009 (HQ116261) O/TAI/15/2009 (HQ116262) O/TAI/16/2009 (HQ116263) O/TAI/12/2009 (HQ116260) O/TAI/17/2009 (HQ116264) O-GD/MAY/7/2010 O/MOG/CO3/2010* (ARRIAH) 74 O/MOG/6/2010 O/MOG/9/ O/MOG/7/2010 O/MOG/5/2010 O/RUS/Aug 2010 (ARRIAH) O/MOG/1/2010 O/MOG/2/2010 O/MOG/3/2010 O/MOG/4/2010 O/TAI/4/2011 O/TAI/2/2011 O/TAI/5/2011 O/MAY/8/2009 (HQ116216) O/TAI/18/2009 (HQ116265) O/LAO/1/2009 (HQ116182) O/TAI/3/2009 (HQ116258) O-GD/MAY/10/2010 O-GD/MAY/11/2010 O/MYA/2/2008 (HQ116226) O/MYA 1/08* (TRRL) O/TAI 43/08* (TRRL) 82 O/LAO/2/2008 (HQ116180) O/LAO/3/2008 (HQ116181) O/TAI 40/08* (TRRL) O/TAI 41/08* (TRRL) O/TAI/5/2008 (HQ116252) O/TAI 44/08* (TRRL) O/TAI/7/2008 (HQ116254) O/TAI 75/08* (TRRL) O/TAI/3/2008 (HQ116251) O/TAI/2/2008 (HQ116250) O/TAI 55/08* (TRRL) O/TAI/1/2009 (HQ116256) O/TAI/4/2009 (HQ116259) O/TAI/6/2008 (HQ116253) O/TAI/2/2009 (HQ116257) O/TAI/12/2008 (HQ116255) 80 O/TAI 60/08* (TRRL) O/TAI 5/08* (TRRL) 75 O/TAI 7/08* (TRRL) O/TAI/14/2007 (HQ116249) O/TAI/9/2007 (HQ116245) O/LAO/1/2007 (HQ116175) O/MAY/7/2007 (HQ116211) O/MAY/9/2007 (HQ116212) O/MAY/5/2007 (HQ116209) O/MYA/3/2008 (HQ116227) O/MAY/4/2007 (HQ116208) O/MAY/6/2007 (HQ116210) O/TAI/7/2007 (HQ116243) O/TAI/6/2007 (HQ116242) O/TAI/12/2007 (HQ116247) O/MAY/5/2009 (HQ116213) O/MAY/6/2009 (HQ116214) O/MAY/7/2009 (HQ116215) O/MYA/1/2009 O/MYA/9/2009 (HQ116230) O/MYA/12/2009 O-GD/MAY/28/2009 O/TAI/1/2010 O/TAI/20/2009 (HQ116267) O-GD/MAY/3/2010 O/TAI/25/2009 (HQ116272) O/TAI/21/2009 (HQ116268) O-GD/MAY/2/2010 O/TAI/24/2009 (HQ116271) O/TAI/26/2009 O/TAI/8/2005 (HQ116237) O/TAI/1/2005 (HQ116234) 83 O/TAI/21/05* (TRRL) O/TAI/10/2010 O-GD/MAY/12/2010 O/VIT/5/2010 O/VIT/18/2010 O/TAI/6/2010 O-GD/MAY/8/2010 O/TAI/4/2010 O/TAI/27/2009 O/TAI/2/2010 O/TAI/5/2010 O/TAI/3/2010 O-GD/MAY/13/2010 O/TAI/9/2010 O/MYA/7/2002 (DQ164928) O/MYA/4/2004 O/MYA/5/04* (TRRL) 70 O/MYA/2/2006 (HQ116225) O/MYA/3/2009 O/LAO/2/2001 (EU667445) 93 O/MAY/5/2001 (DQ164921) O/MAY/6/2001 (DQ164922) O/LAO/7/2003 (EU667448) O/LAO/4/2001 (DQ164907) O/LAO/1/2003 (EU667446) O/LAO/35/2003 (EU667450) O/VIT/6/2005 (HQ116279) O/MAY/1/2005 (HQ1161) O/MAY/2/2005 (HQ1161) 91 O/TAI/10/2007 (HQ116246) O/TAI/3/2003 (DQ1641) O/TAI/15/05* (TRRL) O/TAI/14/05* (TRRL) O/VIT/7/2006 (HQ116290) O/VIT/5/2006 (HQ116288) O/VIT/4/2006 (HQ116287) 77 O/VIT/6/2006 (HQ116289) 82 O/LAO/2/2007 (HQ116176) O/LAO/4/2007 (HQ1161) O/LAO/3/2007 (HQ116177) 73 O/LAO/1/2008 (HQ116179) O/TAI/4/2007 (HQ116240) O/TAI/5/2007 (HQ116241) O/TAI/13/2007 (HQ116248) O/MAY/5/2006 (HQ116207) 80 O/TAI/9/2005 (HQ116238) O/TAI/10/2005 (HQ116239) O/TAI/8/2007 (HQ116244) O/TAI/8/2004 (HQ116233) O/MAY/2/2001 (HQ116185) O/MAY/3/2001 (DQ164920) O/MYA/5/ (DQ164926) O/MYA/2/2000 (DQ164927) O/MYA/1/ (AJ303521) O/MYA/7/ (DQ164925) O/MYA/3/04* (TRRL) O/MYA/4/04* (TRRL) 87 O/MYA/1/2006 O/VIT/4/2005 (HQ1162) O/VIT/4/05* (TRRL) O/VIT/10/05* (TRRL) O/HLJOC12/03 (China) (DQ1143) 74 O/MOG/2004 (ARRIAH) O/VIT/6/05* (TRRL) 89 O/VIT/9/05* (TRRL) O/MYA/3/ O/MYA/1/04* (TRRL) O/MYA/2/04* (TRRL) 79 O/MYA/10/2009 (HQ116231) O/MYA/11/2009 (HQ116232) O/MYA/13/ O/VIT/NCVD-17/2010 (NVRQS) O/VIT/NCVD-18/2010 (NVRQS) O/VIT/NCVD-20/2010 (NVRQS) O/VIT/NCVD-19/2010 (NVRQS) 86 O-GD/MAY/30/ O/TAI/22/2009 (HQ116269) O/MYA/5/2009 (HQ116228) O/MYA/6/2009 (HQ116229) O/HKN/6/2010 O/HKN/18/2010 O/HKN/4/2010 O/HKN/1/ O/HKN/19/2010 O/HKN/20/2010 (HM2261) O/NC/CHA/2010 (HQ652080) O/VIT/NCVD-8/2010 (NVRQS) O/VIT/NCVD-9/2010 (NVRQS) O/SKR/4/2010 O/KOR/1/2010* (HM143846) O/MY/CHA/2010 (HQ652079) O/TZ/CHA/2010 (HQ652081) O/JPN/2010 (NIAH) O/CHA/31/2010* (JF792356) O/RUS/Jul 2010 (ARRIAH) O/DY/CHA/2010 (HQ6520) O/HKN/7/2010 O/HKN/8/2010 O/HKN/13/2010 O/HKN/14/ O/HKN/15/2010 O/HKN/9/2010 O/HKN/10/2010 O/HKN/11/2010 O/HKN/12/2010 O/TAI/189/87* (TRRL) O/MYA/1/2010 O/MYA/2/2010 Cam- ME-SA EA-3 EA-2 EA-4 WA EA-1 ISA-2 ISA-1 CATHAY Mya- SEA WRLFMD Quarterly Report July-September Thailand WRLFMD/2011/00033 Date received: 28/07/2011 No. of samples: 17 O: 1 Topotype: ME-SA Lineage: PanAsia O: 5 Topotype: SEA Lineage: Mya- A: 11 Topotype: ASIA Lineage: Sea km mi Daniel Dalet / d-maps.com Mya- SEA O/TAI/23/2009 (HQ116270) O/TAI/189/87* (TRRL) O/MYA/1/2010 O/MYA/2/2010 Cam- Pak- O1/Manisa/TUR/69 (AJ251477) O/IND/53/79 (AF292107) O/IND/R2/75* (AF204276) PanAsia-2 Sri Lanka Irn-2001 Ind-2001 O/CAM/1/2004 (HQ116171) O/VIT/5/05* (TRRL) O/VIT/7/2004 (HQ116274) O/VIT/8/05* (TRRL) O/VIT/8/2004 (HQ116275) O/VIT/7/2005 (HQ116280) O/CAM/1/2008 (HQ116174) O/LAO/17/2003 (DQ164912) O/LAO/2/2006 (2003)(EU667451) O/LAO/19/2003 (DQ164913) O/LAO/20/2003 (EU667449) O/LAO/26/2003 (EU667436) O/VIT/1/2004 (DQ165032) O/LAO/31/2003 (DQ164918) O/LAO/3/2006 (2004)(EU667452) O/LAO/4/2006 (2004)(EU667453) O/LAO/22/2003 (EU667434) O/LAO/23/2003 (DQ164915) O/LAO/28/2003 (DQ164916) O/LAO/30/2003 (DQ164917) O/LAO/21/2003 (DQ164914) O/LAO/5/2006 (2003)(EU667454) O/LAO/12/2003 (DQ164910) O/LAO/24/2003 (EU667435) O/LAO/13/2003 (DQ164911) O/VIT/2/2010 O/TAI/19/2009 (HQ116266) O-GD/MAY/29/2009 O/LAO/1/2010 O-GD/MAY/25/ O-GD/MAY/26/2009 O/MAY/20/2009 (HQ116218) O/MAY/21/2009 (HQ116219) 82 O-GD/MAY/23/ O-GD/MAY/24/2009 O-GD/MAY/27/2009 O-GD/MAY/22/2009 O/TAI/13/2009 (HQ116261) O/TAI/15/2009 (HQ116262) O/TAI/16/2009 (HQ116263) O/TAI/12/2009 (HQ116260) O/TAI/17/2009 (HQ116264) O-GD/MAY/7/2010 O/MOG/CO3/2010* (ARRIAH) 74 O/MOG/6/2010 O/MOG/9/ O/MOG/7/2010 O/MOG/5/2010 O/RUS/Aug 2010 (ARRIAH) O/TAI/7/2011 O/VIT/21/2010 O/VIT/23/2010 O/VIT/20/2010 O/LAO/1/ O/LAO/2/2011 O/VIT/7/2010 O/VIT/8/2010 O/VIT/6/2010 O/VIT/23/2011 O/CAM/4/2010 O/VIT/9/ O/VIT/19/2010 O/VIT/14/2010 O/VIT/3/2010 O/VIT/1/2011 O/VIT/10/2010 O/VIT/11/2010 O/VIT/15/2010 O/VIT/22/2010 O/CAM/5/2010 O/CAM/8/2010 O/CAM/2/2010 O/VIT/13/2010 O/CAM/1/2010 O/CAM/3/2010 O/CAM/6/2010 O/VIT/4/2010 O/VIT/12/2010 O/VIT/3/2011 O/VIT/32/2011 O/VIT/30/ O/VIT/34/2011 O/VIT/35/2011 O/CHA/7/2011* (JF837375) O/VIT/12/2011 O/VIT/9/2011 O/VIT/4/2011 O/VIT/26/2011 O/LAO/2/2010 O/VIT/2/2011 O/VIT/21/2011 O/VIT/10/2011 O/VIT/11/2011 O/VIT/22/2011 O/VIT/7/2011 O/VIT/8/2011 O/VIT/15/2011 O/VIT/27/2011 O/VIT/25/2011 O/VIT/31/2011 O/VIT/29/2011 O/VIT/28/2011 O/VIT/16/2010 O/VIT/6/2011 O/VIT/16/2011 O/VIT/5/2011 O/VIT/17/2011 O/VIT/13/2011 O/VIT/14/2011 O/VIT/36/2011 O/VIT/37/2011 O/LAO/11/2003 (DQ164909) O/LAO/3/2003 (DQ164908) O/LAO/6/2003 (EU667447) O/LAO/34/2003 O/VIT/3/2005 (HQ116277) O/VIT/3/05* (TRRL) O/CAM/2/2000 (AJ318828) O/CAM/4/2000 (AJ318829) O/TAI/9/ (DQ1648) O/TAW/2/ (AJ2927) O/UKG/35/2001 (AJ539141) O/LAO/11/ (EU667443) O/MAY/2/2000 (AJ318846) O/TAI/1/2000 O/LAO/1/ (EU667441) O/LAO/1/2000 (EU667444) O/LAO/2/2000 (AJ318844) O/TAI/2/2003 (DQ1640) O/CAM/4/2006 (HQ116172) O/CAM/5/2006 (HQ116173) O/VIT/17/2005 (HQ116283) O/TAI/7/2011 O/VIT/21/2010 O/VIT/23/2010 O/VIT/20/2010 O/LAO/1/2011 O/LAO/2/2011 O/VIT/7/2010 O/VIT/8/2010 O/VIT/6/2010 O/VIT/23/2011 O/CAM/4/2010 O/VIT/9/2010 O/VIT/19/2010 O/VIT/14/2010 O/VIT/3/2010 O/VIT/1/2011 O/VIT/10/2010 O/VIT/11/2010 O/VIT/15/2010 O/VIT/22/2010 O/CAM/5/2010 O/CAM/8/2010 O/CAM/2/2010 O/VIT/13/2010 O/CAM/1/2010 O/CAM/3/2010 O/CAM/6/2010 O/VIT/4/2010 O/VIT/12/2010 O/VIT/3/2011 O/VIT/32/2011 O/VIT/30/2011 O/VIT/34/2011 O/VIT/35/2011 O/CHA/7/2011* (JF837375) O/VIT/12/2011 O/VIT/9/2011 O/VIT/4/2011 O/VIT/26/2011 O/LAO/2/2010 O/VIT/2/2011 O/VIT/21/2011 O/VIT/10/2011 O/VIT/11/2011 O/VIT/22/2011 O/VIT/7/2011 O/VIT/8/2011 O/VIT/15/2011 O/VIT/27/2011 O/VIT/25/2011 O/VIT/31/2011 O/VIT/29/2011 O/VIT/28/2011 O/VIT/16/2010 O/VIT/6/2011 O/VIT/16/2011 O/VIT/5/2011 O/VIT/17/2011 O/VIT/13/2011 O/VIT/14/2011 O/VIT/36/2011 O/VIT/37/2011 EA-3 EA-2 EA-4 WA EA-1 ISA-2 ISA-1 CATHAY PanAsia ME-SA O/MOG/1/2010 O/MOG/2/2010 O/MOG/3/2010 O/MOG/4/2010 O/TAI/4/2011 O/TAI/2/2011 O/TAI/5/ O/TAI/10/2010 O-GD/MAY/12/2010 O/VIT/5/2010 O/VIT/18/2010 O/TAI/6/2010 O-GD/MAY/8/2010 O/TAI/4/2010 O/TAI/27/2009 O/TAI/2/2010 O/TAI/5/2010 O/TAI/3/2010 O-GD/MAY/13/2010 O/TAI/9/

15 WRLFMD Quarterly Report July-September A/TAI/15/2008 (HQ116343) A/TAI/6/2009 (HQ116349) A/TAI/19/2008 (HQ116347) A/TAI 73/08* (TRRL) A/MAY/2/2009 (HQ116305) A/LAO/4/2008 (HQ1162) A/TAI/16/2008 (HQ116344) A/TAI 67/08* (TRRL) A/HuBWH/CHA/2009 (JF792355) A/TAI/18/2008 (HQ116346) A/TAI 70/08* (TRRL) A/TAI/5/2009 (HQ116348) A/TAI/17/2008 (HQ116345) A/TAI 68/08* (TRRL) A/TAI/10/2009 (HQ116353) A/VN/02/2009* (GQ406248) A/VN/03/2009* (GQ406249) A/VN/16/2009* (GQ406251) A/MAY/9/2009 (HQ116306) A/VN/09/2009* (GQ406247) A/VN/11/2009* (GQ406250) A/VN/20/2009* (GQ406252) A/TAI/14/2009 (HQ116354) A/TAI/13/2008 (HQ116341) A/TAI 62/08* (TRRL) A/TAI/9/2008 (HQ116338) A/TAI/10/2008 (HQ116339) A/TAI/4/2008 (HQ116336) A/TAI/8/2009 (HQ116351) A/TAI/9/2009 (HQ116352) A/TAI/7/2009 (HQ116350) A/VIT/1/2010 A/VIT/17/2010 A/TAI 47-1/08* (TRRL) A/TAI 77/08* (TRRL) A/TAI/8/2008 (HQ116337) A/TAI/11/2008 (HQ116340) A/TAI/14/2008 (HQ116342) A/TAI 63/08* (TRRL) A/MAY/3/2007 (HQ116302) A/TAI/11/2007 (HQ116335) A/MAY/1/2008 (HQ116303) A/MAY/3/2008 (HQ116304) A/TAI 16-1/08* (TRRL) A/TAI 20/08* (TRRL) A/TAI/8/2006 (HQ116330) A/TAI/11/2006 (HQ116333) A/TAI/2/2006 (HQ116325) A/TAI/3/2006 (HQ116326) A/TAI/10/2006 (HQ116332) A/TAI/4/2006 (HQ116327) A/TAI/7/2006 (HQ116329) A/TAI/6/2006 (HQ116328) A/TAI/9/2006 (HQ116331) A/CAM/1/2006 (HQ116292) A/CAM/2/2006 (HQ116293) A/CAM/2/2008 (HQ1162) A/CAM 4/08* (TRRL) A/LAO/6/2006 (EU667457) A/LAO/7/2006 (EU667458) A/LAO/8/2006 (EU667459) A/VIT/14/2005 (HQ116368) A/VIT/18/2005 (HQ116369) A/TAI/11/2005 (HQ116323) Sea- A/TAI/1/2006 (HQ116324) A/MAY/1/2007 (HQ116301) A/TAI/3/2007 (HQ116334) A/TAI 54/08* (TRRL) A/VIT/8/2005 (HQ116365) A/VIT/10/2005 (HQ116366) A/VIT/13/2005 (HQ116367) A/TAI/45/04* (TRRL) A/TAI/48-2/04R2* (TRRL) A/TAI/66/04R1* (TRRL) A/TAI/3-3/05* (TRRL) A/TAI/1/05R2B2* (TRRL) A/TAI/4/05R1* (TRRL) ASIA A/TAI/6/05* (TRRL) A/VIT/6/2004 (HQ116360) A/VIT/10/2004 (HQ116362) A/TAI/3/2005 (HQ116320) A/TAI/9/2004 (HQ116318) A/VIT/5/2004 (HQ116359) A/VIT/9/2004 (HQ116361) A/VIT/11/2004 (HQ116363) A/TAI/3507/47R2* (TRRL) A/TAI/4/2003 (HQ116311) A/TAI/1/2011 A/TAI/4/04R2* (TRRL) A/TAI/10/2003 (HQ116314) A/TAI/7/2003 (HQ116312) A/TAI/3/2011 A/TAI/6-3/04* (TRRL) A/MAY/1/2003 (HQ1162) A/MAY/3/2003 (HQ1162) A/THA 69-6/10* (TRRL) A/TAI/8/2003 (HQ116313) A/LAO/36/2003 (EU667455) A/LAO/1/2006 (2003)(EU667456) A/TAI/8/04R2* (TRRL) A/TAI/8/2010 A/MAY/4/2003 (HQ1162) A/TAI/2/04R2* (TRRL) A/VIT/4/2004 (HQ116358) 71 A/TAI/7/2010 A/THA 67-3/10* (TRRL) A/VIT/12/2004 (HQ116364) A/TAI/28-04* (TRRL) A/TAI/12/2003 (HQ116316) A/TAI/11/2003 (HQ116315) A/TAI/6/2004 (HQ116317) A/TAI/11/04* (TRRL) A/TAI/1/2011 A/THA 66-1/10* (TRRL) A/TAI/3/2011 A/THA 69-6/10* (TRRL) A/TAI/8/2010 A/TAI/12/2011 A/TAI/7/2010 A/THA 67-3/10* (TRRL) A/THA 66-1/10* (TRRL) A/TAI/12/2011 A/TAI/13/2011 A/TAI/13/2011 A/TAI/10/2011 A/TAI/6/ A/TAI/10/2011 A/TAI/6/2011 A/TAI/11/2011 A/TAI/8/2011 A/TAI/9/2011 A/MAY/2/2002 (EU414533) A/TAI/14-1/04* (TRRL) A/TAI/2/ (EF2087) A/TAI/4/2005 (HQ116321) A/TAI/11/2011 A/TAI/7/2005 (HQ116322) A/MAY/5/2005 (HQ116300) A/TAI/2/2005 (HQ116319) A/TAI/8/2011 A/TAI/118/87* (EF208777) A/IND/7/82 (10) A/IND/17/77* (AF204108) A22/IRQ/24/64 (AJ251474) Thai-87 A22 A/TAI/9/2011 A/IRN/87 A/SAU/41/91 (FJ755085) A/IRN/22/ (EF208772) Iran-87 Iran- A/IRN/1/ (EF208771) Iran- A/SAU/23/86 (EU414536) Sau-86 A/APR/51/05* (EF120400) A/APS/50/05/1* (IND)(EU1091) A/APS/45/05* (IND)(EU1092) A/APS/58/05* (IND)(EU1090) A/APS/66/05* (IND)(EU1088) A/APS/59/05* (IND)(EU1089) A/APS/44/05* (EF120402) A/APS/68/05* (EF120403) A/IND/53/08* (FJ617241) A/MYA/4/2010 A/IND/152/06* (FJ617247) A/IND/163/08* (FJ617242) A/IND/243/04* (FJ617245) A/IND/360/07* (FJ617243) A/IND/124/08* (FJ617244) A/IND/128/08* (FJ617246) A15/Bangkok/TAI/60 (AY593755) A15 AFRICA

16 Turkey WRLFMD/2011/00041 Date received: 29/09/2011 No. of samples: 38 O: 17 A: 3 A+O: 1 Asia1: 3 FMDV-GD: 14 VP1 sequencing in progress O A Asia 1 FMDV-GD 48 km 60 mi Daniel Dalet / d-maps.com 16

17 O/TAI/23/2009 (HQ116270) O/VIT/2/2010 O/TAI/19/2009 (HQ116266) O-GD/MAY/29/2009 O/LAO/1/2010 O-GD/MAY/25/2009 O-GD/MAY/26/2009 O/MAY/20/2009 (HQ116218) O/MAY/21/2009 (HQ116219) O-GD/MAY/23/2009 O-GD/MAY/24/2009 O-GD/MAY/27/2009 O-GD/MAY/22/2009 O/TAI/13/2009 (HQ116261) O/TAI/15/2009 (HQ116262) O/TAI/16/2009 (HQ116263) O/TAI/12/2009 (HQ116260) O/TAI/17/2009 (HQ116264) O-GD/MAY/7/2010 O/MOG/CO3/2010* (ARRIAH) O/MOG/6/2010 O/MOG/9/2010 O/MOG/7/2010 O/MOG/5/2010 O/RUS/Aug 2010 (ARRIAH) O/MOG/1/2010 O/MOG/2/2010 O/MOG/3/2010 O/MOG/4/2010 O/TAI/4/2011 O/TAI/2/2011 O/TAI/5/2011 O/MAY/8/2009 (HQ116216) O/TAI/18/2009 (HQ116265) O/LAO/1/2009 (HQ116182) O/TAI/3/2009 (HQ116258) O-GD/MAY/10/2010 O-GD/MAY/11/2010 O/MYA/2/2008 (HQ116226) O/MYA 1/08* (TRRL) O/TAI 43/08* (TRRL) O/LAO/2/2008 (HQ116180) O/LAO/3/2008 (HQ116181) O/TAI 40/08* (TRRL) O/TAI 41/08* (TRRL) O/TAI/5/2008 (HQ116252) O/TAI 44/08* (TRRL) O/TAI/7/2008 (HQ116254) O/TAI 75/08* (TRRL) O/TAI/3/2008 (HQ116251) O/TAI/2/2008 (HQ116250) O/TAI 55/08* (TRRL) O/TAI/1/2009 (HQ116256) O/TAI/4/2009 (HQ116259) O/TAI/6/2008 (HQ116253) O/TAI/2/2009 (HQ116257) O/TAI/12/2008 (HQ116255) O/TAI 60/08* (TRRL) O/TAI 5/08* (TRRL) O/TAI 7/08* (TRRL) O/TAI/14/2007 (HQ116249) O/TAI/9/2007 (HQ116245) O/LAO/1/2007 (HQ116175) O/MAY/7/2007 (HQ116211) O/MAY/9/2007 (HQ116212) O/MAY/5/2007 (HQ116209) O/MYA/3/2008 (HQ116227) O/MAY/4/2007 (HQ116208) O/MAY/6/2007 (HQ116210) O/TAI/7/2007 (HQ116243) O/TAI/6/2007 (HQ116242) O/TAI/12/2007 (HQ116247) O/MAY/5/2009 (HQ116213) O/MAY/6/2009 (HQ116214) O/MAY/7/2009 (HQ116215) O/MYA/1/2009 O/MYA/9/2009 (HQ116230) O/MYA/12/2009 O-GD/MAY/28/2009 O/TAI/1/2010 O/TAI/20/2009 (HQ116267) O-GD/MAY/3/2010 O/TAI/25/2009 (HQ116272) O/TAI/21/2009 (HQ116268) O-GD/MAY/2/2010 O/TAI/24/2009 (HQ116271) O/TAI/26/2009 O/TAI/8/2005 (HQ116237) O/TAI/1/2005 (HQ116234) O/TAI/21/05* (TRRL) O/TAI/10/2010 O-GD/MAY/12/2010 O/VIT/5/2010 O/VIT/18/2010 O/TAI/6/2010 O-GD/MAY/8/2010 O/TAI/4/2010 O/TAI/27/2009 O/TAI/2/2010 O/TAI/5/2010 O/TAI/3/2010 O-GD/MAY/13/2010 O/TAI/9/2010 O/MYA/7/2002 (DQ164928) O/MYA/4/2004 O/MYA/5/04* (TRRL) O/MYA/2/2006 (HQ116225) O/MYA/3/2009 O/LAO/2/2001 (EU667445) O/MAY/5/2001 (DQ164921) O/MAY/6/2001 (DQ164922) O/LAO/7/2003 (EU667448) O/LAO/4/2001 (DQ164907) O/LAO/1/2003 (EU667446) O/LAO/35/2003 (EU667450) O/VIT/6/2005 (HQ116279) O/MAY/1/2005 (HQ1161) O/MAY/2/2005 (HQ1161) O/TAI/10/2007 (HQ116246) O/TAI/3/2003 (DQ1641) O/TAI/15/05* (TRRL) O/TAI/14/05* (TRRL) O/VIT/7/2006 (HQ116290) O/VIT/5/2006 (HQ116288) O/VIT/4/2006 (HQ116287) O/VIT/6/2006 (HQ116289) O/LAO/2/2007 (HQ116176) O/LAO/4/2007 (HQ1161) O/LAO/3/2007 (HQ116177) O/LAO/1/2008 (HQ116179) O/TAI/4/2007 (HQ116240) O/TAI/5/2007 (HQ116241) O/TAI/13/2007 (HQ116248) O/MAY/5/2006 (HQ116207) O/TAI/9/2005 (HQ116238) O/TAI/10/2005 (HQ116239) O/TAI/8/2007 (HQ116244) O/TAI/8/2004 (HQ116233) O/MAY/2/2001 (HQ116185) O/MAY/3/2001 (DQ164920) O/MYA/5/ (DQ164926) O/MYA/2/2000 (DQ164927) O/MYA/1/ (AJ303521) O/MYA/7/ (DQ164925) O/MYA/3/04* (TRRL) O/MYA/4/04* (TRRL) O/MYA/1/2006 O/VIT/4/2005 (HQ1162) O/VIT/4/05* (TRRL) O/VIT/10/05* (TRRL) O/HLJOC12/03 (China) (DQ1143) O/MOG/2004 (ARRIAH) O/VIT/6/05* (TRRL) O/VIT/9/05* (TRRL) O/MYA/3/2010 O/MYA/1/04* (TRRL) O/MYA/2/04* (TRRL) 83 O/MYA/10/2009 (HQ116231) O/MYA/11/2009 (HQ116232) O/MYA/13/2009 O/VIT/NCVD-17/2010 (NVRQS) O/VIT/NCVD-18/2010 (NVRQS) O/VIT/NCVD-20/2010 (NVRQS) O/VIT/NCVD-19/2010 (NVRQS) O-GD/MAY/30/2009 O/TAI/22/2009 (HQ116269) O/MYA/5/2009 (HQ116228) O/MYA/6/2009 (HQ116229) O/HKN/6/2010 O/HKN/18/2010 O/HKN/4/2010 O/HKN/1/2010 O/HKN/19/2010 O/HKN/20/2010 (HM2261) O/NC/CHA/2010 (HQ652080) O/VIT/NCVD-8/2010 (NVRQS) O/VIT/NCVD-9/2010 (NVRQS) O/SKR/4/2010 O/KOR/1/2010* (HM143846) O/MY/CHA/2010 (HQ652079) O/TZ/CHA/2010 (HQ652081) O/JPN/2010 (NIAH) O/CHA/31/2010* (JF792356) O/RUS/Jul 2010 (ARRIAH) O/DY/CHA/2010 (HQ6520) O/HKN/7/2010 O/HKN/8/2010 O/HKN/13/2010 O/HKN/14/2010 O/HKN/15/2010 O/HKN/9/2010 O/HKN/10/2010 O/HKN/11/2010 O/HKN/12/2010 O/TAI/189/87* (TRRL) O/MYA/1/ O/MYA/2/2010 Cam- ME-SA EA-3 EA EA-4 WA EA-1 ISA-2 ISA-1 CATHAY Mya- O1/Manisa/TUR/69 (AJ251477) O/IND/53/79 (AF292107) O/IND/R2/75* (AF204276) Sri Lanka SEA O/CAM/1/2004 (HQ116171) O/VIT/5/05* (TRRL) O/VIT/7/2004 (HQ116274) O/VIT/8/05* (TRRL) O/VIT/8/2004 (HQ116275) O/VIT/7/2005 (HQ116280) O/CAM/1/2008 (HQ116174) O/LAO/17/2003 (DQ164912) O/LAO/2/2006 (2003)(EU667451) O/LAO/19/2003 (DQ164913) O/LAO/20/2003 (EU667449) O/LAO/26/2003 (EU667436) O/VIT/1/2004 (DQ165032) O/LAO/31/2003 (DQ164918) O/LAO/3/2006 (2004)(EU667452) 91 O/LAO/4/2006 (2004)(EU667453) O/LAO/22/2003 (EU667434) 72 O/LAO/23/2003 (DQ164915) O/LAO/28/2003 (DQ164916) O/LAO/30/2003 (DQ164917) O/LAO/21/2003 (DQ164914) O/LAO/5/2006 (2003)(EU667454) O/LAO/12/2003 (DQ164910) O/LAO/24/2003 (EU667435) O/LAO/13/2003 (DQ164911) O/LAO/11/2003 (DQ164909) O/LAO/3/2003 (DQ164908) O/LAO/6/2003 (EU667447) O/LAO/34/2003 O/VIT/3/2005 (HQ116277) O/VIT/3/05* (TRRL) O/CAM/2/2000 (AJ318828) O/CAM/4/2000 (AJ318829) O/TAI/9/ (DQ1648) O/TAW/2/ (AJ2927) O/UKG/35/2001 (AJ539141) O/LAO/11/ (EU667443) 88 O/MAY/2/2000 (AJ318846) O/TAI/1/2000 O/LAO/1/ (EU667441) O/LAO/1/2000 (EU667444) O/LAO/2/2000 (AJ318844) O/TAI/2/2003 (DQ1640) O/CAM/4/2006 (HQ116172) O/CAM/5/2006 (HQ116173) O/VIT/17/2005 (HQ116283) O/TAI/7/2011 O/VIT/21/2010 O/VIT/23/2010 O/VIT/20/2010 O/LAO/1/ O/LAO/2/2011 O/VIT/7/ O/VIT/8/2010 O/VIT/6/2010 O/VIT/23/2011 O/CAM/4/2010 O/VIT/9/ O/VIT/19/2010 O/VIT/14/2010 O/VIT/3/2010 O/VIT/1/2011 O/VIT/10/2010 O/VIT/11/2010 O/VIT/15/2010 O/VIT/22/2010 O/CAM/5/2010 O/CAM/8/2010 O/CAM/2/2010 O/VIT/13/2010 O/CAM/1/2010 O/CAM/3/2010 O/CAM/6/2010 O/VIT/4/2010 O/VIT/12/2010 O/VIT/3/2011 O/VIT/32/2011 O/VIT/30/ O/VIT/34/2011 O/VIT/35/2011 O/CHA/7/2011* (JF837375) O/VIT/12/2011 O/VIT/9/2011 O/VIT/4/2011 O/VIT/26/2011 O/LAO/2/2010 O/VIT/2/2011 O/VIT/21/2011 O/VIT/10/2011 O/VIT/11/2011 O/VIT/22/2011 O/VIT/7/2011 O/VIT/8/2011 O/VIT/15/2011 O/VIT/27/2011 O/VIT/25/2011 O/VIT/31/2011 O/VIT/29/2011 O/VIT/28/2011 O/VIT/16/2010 O/VIT/6/2011 O/VIT/16/2011 O/VIT/5/2011 O/VIT/17/2011 O/VIT/13/2011 O/VIT/14/2011 O/VIT/36/2011 O/VIT/37/2011 WRLFMD Quarterly Report July-September Vietnam WRLFMD/2011/00034 Date received: 28/07/2011 No. of samples: 7 O: 1 Topotype: SEA Lineage: Mya- O: 5 Topotype: ME-SA Lineage: PanAsia A: 1 Topotype: ASIA Lineage: Sea- O/TAI/10/2010 O-GD/MAY/12/2010 O/VIT/5/2010 O/VIT/18/2010 O/TAI/6/2010 O-GD/MAY/8/ O/TAI/4/2010 O/TAI/27/2009 O/TAI/2/2010 O/TAI/5/2010 O/TAI/3/ O-GD/MAY/13/ O/TAI/9/2010 SEA 18 O/TAI/7/2011 O/VIT/21/2010 O/VIT/23/2010 O/VIT/20/2010 O/LAO/1/ O/LAO/2/2011 Pak- PanAsia-2 Irn-2001 Ind-2001 O/VIT/7/2010 O/VIT/8/2010 O/VIT/6/2010 O A O/VIT/23/2011 O/CAM/4/2010 O/VIT/9/ O/VIT/19/2010 O/VIT/14/2010 O/VIT/3/2010 O/VIT/1/2011 O/VIT/10/2010 O/VIT/11/2010 O/VIT/15/2010 O/VIT/22/2010 O/CAM/5/2010 O/CAM/8/ O/CAM/2/2010 O/VIT/13/2010 O/CAM/1/2010 O/CAM/3/2010 O/CAM/6/2010 O/VIT/4/2010 ME-SA O/VIT/12/2010 O/VIT/3/2011 PanAsia O/VIT/32/2011 O/VIT/30/ O/VIT/34/2011 O/VIT/35/ km mi Daniel Dalet / d-maps.com O/CHA/7/2011* (JF837375) O/VIT/12/2011 O/VIT/9/2011 O/VIT/4/2011 O/VIT/26/2011 O/LAO/2/2010 O/VIT/2/2011 O/VIT/21/2011 O/VIT/10/2011 O/VIT/11/2011 O/VIT/22/2011 O/VIT/7/2011 O/VIT/8/2011 O/VIT/15/2011 O/VIT/27/2011 O/VIT/25/2011 O/VIT/31/2011 O/VIT/29/2011 O/VIT/28/2011 O/VIT/16/2010 O/VIT/6/2011 O/VIT/16/2011 O/VIT/5/2011 O/VIT/17/2011 O/VIT/13/2011 O/VIT/14/2011 O/VIT/36/2011 EA-3 EA-2 EA-4 WA EA-1 ISA-2 ISA-1 O/VIT/37/2011 CATHAY

18 WRLFMD Quarterly Report July-September A/TAI/15/2008 (HQ116343) A/TAI/6/2009 (HQ116349) A/TAI/19/2008 (HQ116347) A/TAI 73/08* (TRRL) A/MAY/2/2009 (HQ116305) A/LAO/4/2008 (HQ1162) A/TAI/16/2008 (HQ116344) A/TAI 67/08* (TRRL) A/HuBWH/CHA/2009 (JF792355) A/TAI/18/2008 (HQ116346) A/TAI 70/08* (TRRL) A/TAI/5/2009 (HQ116348) A/TAI/17/2008 (HQ116345) A/TAI 68/08* (TRRL) A/TAI/10/2009 (HQ116353) A/VN/02/2009* (GQ406248) A/VN/03/2009* (GQ406249) A/VN/16/2009* (GQ406251) A/MAY/9/2009 (HQ116306) A/VN/09/2009* (GQ406247) A/VN/11/2009* (GQ406250) A/VN/20/2009* (GQ406252) A/TAI/14/2009 (HQ116354) A/TAI/13/2008 (HQ116341) A/TAI 62/08* (TRRL) A/TAI/9/2008 (HQ116338) A/TAI/10/2008 (HQ116339) A/TAI/4/2008 (HQ116336) A/TAI/8/2009 (HQ116351) A/TAI/9/2009 (HQ116352) 91 A/TAI/7/2009 (HQ116350) A/VIT/1/2010 A/VIT/17/2010 A/TAI 47-1/08* (TRRL) A/TAI 77/08* (TRRL) A/TAI/8/2008 (HQ116337) A/TAI/11/2008 (HQ116340) A/TAI/14/2008 (HQ116342) A/TAI 63/08* (TRRL) A/TAI/15/2008 (HQ116343) A/TAI/6/2009 (HQ116349) A/TAI/19/2008 (HQ116347) A/TAI 73/08* (TRRL) A/MAY/2/2009 (HQ116305) A/LAO/4/2008 (HQ1162) A/TAI/16/2008 (HQ116344) A/TAI 67/08* (TRRL) A/HuBWH/CHA/2009 (JF792355) A/TAI/18/2008 (HQ116346) A/TAI 70/08* (TRRL) A/TAI/5/2009 (HQ116348) A/TAI/17/2008 (HQ116345) A/TAI 68/08* (TRRL) A/TAI/10/2009 (HQ116353) A/VN/02/2009* (GQ406248) A/VN/03/2009* (GQ406249) A/VN/16/2009* (GQ406251) A/MAY/9/2009 (HQ116306) A/VN/09/2009* (GQ406247) A/VN/11/2009* (GQ406250) A/VN/20/2009* (GQ406252) A/TAI/14/2009 (HQ116354) A/TAI/13/2008 (HQ116341) A/TAI 62/08* (TRRL) A/TAI/9/2008 (HQ116338) A/TAI/10/2008 (HQ116339) A/TAI/4/2008 (HQ116336) A/TAI/8/2009 (HQ116351) A/TAI/9/2009 (HQ116352) A/TAI/7/2009 (HQ116350) A/VIT/1/2010 A/VIT/17/2010 A/TAI 47-1/08* (TRRL) A/TAI 77/08* (TRRL) A/TAI/8/2008 (HQ116337) A/TAI/11/2008 (HQ116340) A/TAI/14/2008 (HQ116342) A/TAI 63/08* (TRRL) A/MAY/3/2007 (HQ116302) A/TAI/11/2007 (HQ116335) A/MAY/1/2008 (HQ116303) A/MAY/3/2008 (HQ116304) A/TAI 16-1/08* (TRRL) A/TAI 20/08* (TRRL) A/TAI/8/2006 (HQ116330) A/TAI/11/2006 (HQ116333) A/TAI/2/2006 (HQ116325) A/TAI/3/2006 (HQ116326) A/TAI/10/2006 (HQ116332) A/TAI/4/2006 (HQ116327) A/TAI/7/2006 (HQ116329) A/TAI/6/2006 (HQ116328) A/TAI/9/2006 (HQ116331) A/CAM/1/2006 (HQ116292) A/CAM/2/2006 (HQ116293) A/CAM/2/2008 (HQ1162) A/CAM 4/08* (TRRL) A/LAO/6/2006 (EU667457) A/LAO/7/2006 (EU667458) A/LAO/8/2006 (EU667459) A/VIT/14/2005 (HQ116368) A/VIT/18/2005 (HQ116369) A/TAI/11/2005 (HQ116323) Sea- A/TAI/1/2006 (HQ116324) A/MAY/1/2007 (HQ116301) A/TAI/3/2007 (HQ116334) A/TAI 54/08* (TRRL) A/VIT/8/2005 (HQ116365) A/VIT/10/2005 (HQ116366) A/VIT/13/2005 (HQ116367) A/TAI/45/04* (TRRL) A/TAI/48-2/04R2* (TRRL) A/TAI/66/04R1* (TRRL) A/TAI/3-3/05* (TRRL) A/TAI/1/05R2B2* (TRRL) A/TAI/4/05R1* (TRRL) ASIA A/TAI/6/05* (TRRL) A/VIT/6/2004 (HQ116360) A/VIT/10/2004 (HQ116362) A/TAI/3/2005 (HQ116320) A/TAI/9/2004 (HQ116318) A/VIT/5/2004 (HQ116359) A/VIT/9/2004 (HQ116361) A/VIT/11/2004 (HQ116363) A/TAI/3507/47R2* (TRRL) A/TAI/4/2003 (HQ116311) A/TAI/4/04R2* (TRRL) A/TAI/10/2003 (HQ116314) A/TAI/7/2003 (HQ116312) A/TAI/6-3/04* (TRRL) A/MAY/1/2003 (HQ1162) A/MAY/3/2003 (HQ1162) A/TAI/8/2003 (HQ116313) A/LAO/36/2003 (EU667455) A/LAO/1/2006 (2003)(EU667456) A/TAI/8/04R2* (TRRL) A/MAY/4/2003 (HQ1162) A/TAI/2/04R2* (TRRL) A/VIT/4/2004 (HQ116358) A/VIT/12/2004 (HQ116364) A/TAI/28-04* (TRRL) A/TAI/12/2003 (HQ116316) A/TAI/11/2003 (HQ116315) A/TAI/6/2004 (HQ116317) A/TAI/11/04* (TRRL) A/TAI/1/2011 A/TAI/3/2011 A/THA 69-6/10* (TRRL) A/TAI/8/2010 A/TAI/7/2010 A/THA 67-3/10* (TRRL) A/THA 66-1/10* (TRRL) A/TAI/12/2011 A/TAI/13/2011 A/TAI/10/2011 A/TAI/6/2011 A/TAI/11/2011 A/TAI/8/2011 A/TAI/9/2011 A/MAY/2/2002 (EU414533) A/TAI/14-1/04* (TRRL) A/TAI/2/ (EF2087) A/TAI/4/2005 (HQ116321) A/TAI/7/2005 (HQ116322) A/MAY/5/2005 (HQ116300) A/TAI/2/2005 (HQ116319) A/TAI/118/87* (EF208777) Thai-87 A/IND/7/82 (10) A/IND/17/77* (AF204108) A22 A22/IRQ/24/64 (AJ251474) A/IRN/87 Iran-87 A/SAU/41/91 (FJ755085) A/IRN/22/ (EF208772) Iran- A/IRN/1/ (EF208771) Iran- A/SAU/23/86 (EU414536) Sau-86 A/APR/51/05* (EF120400) A/IND/53/08* (FJ617241) A/APS/50/05/1* (IND)(EU1091) A/APS/45/05* (IND)(EU1092) A/APS/58/05* (IND)(EU1090) A/APS/66/05* (IND)(EU1088) A/APS/59/05* (IND)(EU1089) A/APS/44/05* (EF120402) A/APS/68/05* (EF120403) A/MYA/4/2010 A/IND/152/06* (FJ617247) A/IND/163/08* (FJ617242) A/IND/243/04* (FJ617245) A/IND/360/07* (FJ617243) A15/Bangkok/TAI/60 (AY593755) AFRICA A/IND/124/08* (FJ617244) A/IND/128/08* (FJ617246) A15 18