Mariusz Z. Ratajczak M.D., Ph.D., d.hc. Stem Cell Institute at the James Graham Brown Cancer Center, University of Louisville.

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1 Umbilical cord blood-derived CD45 - /SSEA-4 + /OCT-4 + /CD133 + /CXCR4 + /Lin - very small embryonic/epiblast like stem cells (VSELs) Potential Clinical Applications Mariusz Z. Ratajczak M.D., Ph.D., d.hc. Stem Cell Institute at the James Graham Brown Cancer Center, University of Louisville.

2 Circulating pluripotent stem cells CXCR4 SDF-1 gradient SDF-1 gradient SDF-1 gradient SDF-1 gradient SDF-1 gradient

3 Sorting strategy to purify Sca-1 + lin - CD45 - cells Size standard - mix of beads particles with different diameter (1-15µm) Murine BM nucleated cells - with the extended lymphgate to include very small events (2-10µm) 15μm 10μm 6μm 4μm 2μm SSC 2-10µm SSC 1μm FSC FSC Zuba-Surma et al. J Cell Mol Med 2008:12;

4 Non-hematopoietic BM stem cells are Sca-1 + lin - CD45 - SSC Lineage PE 50.5% 0.16% FSC Sca-1 PE-Cy % 0.15% Counts Sca-1 + lin - CD45 - Zuba-Surma et al. Cytometry 2008, 73, CD45 APC-Cy7 Sca-1 + lin - CD45 +

5 Very Small Embryonic Like (VSEL) Stem Cell Hematopoietic Stem Cell (HSC) Sca-1 + lin - CD45 - SSEA-1 Sca-1 + lin - CD45 + Oct4 7-AAD Nanog M1 Kucia et al. Leukemia 2006,20: FL2-A VSEL are diploid VSEL exclude 7-ADD

6 Oct-4 promotor in VSEL is hypomethylated Oct4 Proximal Enhancer Promoter VSEL HSC MSC ESC Shin et al. Leukemia 2009, 23,

7 Oct4 promoter in VSEL shows open chromatin structure (ChIP assay) VSEL HSC MNC ESC THP VSEL HSC BMMNC EB (1d) ESC-D3 VSEL HSC BMMNC EB (1d) ESC-D3 Fold of enrichment Fold of enrichment IgG H3Ac IgG H3Ac IgG H3Ac IgG H3Ac IgG H3Ac D.W. B UB Oct4-S2 Oct4-S1 B UB B UB ** H3Ac H3K9me2 ** ** 25 0 ** ** ** ** βactin Shin et al. Leukemia 2009, 23,

8 VSEL HSC MNC ESC-D3 Heat-Map Analysis for ΔCt Value from realtime PCR (Heatmap builder) Pluripotency Epiblast Germ-line Specification Germ-line Development DNA methylation C/T antigen Imprinted genes Cell Cycle

9 Epiblast/Germ line as origin and scaffold of stem cell system Nervous System extra-embryonic ectoderm Quiescence 1. Ectopic niche PGC precursors Muscles 2. Inhibitory factors 3. Erasure of the somatic imprint Fetal Liver Bone Marrow VSEL status Embryo EPIBLAST (primitive ectoderm) Myocardium Activation 1. Inflammation, tissue injury 2. Epigenetic changes 3. Reestablishment of the Legend: somatic imprint SDF-1 gradient CXCR4 + epiblast derived cells/pgc (VSEL) Genital Ridges Adrenal Glands Ratajczak et al. J Autoimmunity 2008:30;

10 Reprogramming of Genomic Imprinting in VSELs VSEL HSC BMMNC H19-DMR % 41.9 % 50.0 % 100 ** Paternally methylated DMRs DNA methylation level (%) ** ** ** Maternally methylated DMRs H19-DMR1 Rasgrf1-DMR Igf2R-DMR2 KvDMR 0 VSEL HSC BMMNC Proliferation promoting genes (Igf2, Rasgrf1) Shin et al. Leukemia, 2009, 23, Proliferation repressing genes (H19, P57kip2, Igf2R)

11 Confocal Analysis of VSEL from various murine organs Zuba-Surma et al. Cytometry 2008, 73,

12 VSEL-derived spheres in co-cultures with C2C12 cells AP staining on VSEL derived embryonic like bodies Analysis of DNA ploidy AFP Oct4 GATA-6 Cdx2 Sox2 HNF3 AFP Oct4 GATA-6 Cdx2 Sox2 HNF3 VSELs VSELs derived embryonic like bodies

13 The phenotype of most primitive Hematopoietic Stem Cell is still not well defined -Very primitive small ALDH high lin - lymphohematopoietic stem cells were described that i) do not radioprotect lethally irradiated mice, ii) lack spleen colony-forming (CFU-S) activity, however, iii) if cotransplanted with short-term engrafting HSC produce delayed multilineage engraftment (Jones et al., Blood 1996, 88; ). - UCB was reported to contain rare primitive HSC (CD34 - flt - Lin - ) that in contrast to normal adult HSC do not engraft after intravenous injection but if transplanted directly into the bones reveal hematopoietic potential (Kimura T et al. Stem Cells 2007, 25; ). - Human BM also contains a population of rare CD34 - lin - CD38 - HSC that show decreased clonogeneic activity in vitro, but in vivo engraft robustly in immunodeficient mice (Bhatia M et al. Nat Med 1998, 4; ). - Similar cells were recently also found among human BM-derived CD133 + lin - ALDH high cells (Hess DA et al. Blood 2006, 107; ).

14 - no radioprotection - no colonies Sca-1 + lin - CD45 - VSEL OP9 cells VSEL-derived cobble stone area - colonies - radioprotection

15 - no radioprotection - no colonies Sca-1 + lin - CD45 - VSEL OP9 cells VSEL-derived cobble stone area - colonies - radioprotection

16 Freshly isolated Cells expanded from HSC VSEL ctr Ikaros Ikaros HSC VSEL ctr Lmo2 Lmo2 GATA-2 GATA-2 PU.1 PU.1 SCL SCL myb myb Oct-4 Oct-4 Lin-Sca-1+CD45- VSELs CD45 CD41 Gr-1 M1 M % 25% M % 47% Lin-Sca-1+CD45+ HSCs M M M

17 Chimerism after intravenous injection of cells expanded over OP9 cell line 1x10 6 GFP LIN - /CD45 - /Sca-1 + iv (VSEL) 49,48% 32% 11% Peripheral blood 23% 2% 10% 3% B220 CD3 Gr-1 M GFP 50% 7% 59% 16% 70% 17% GFP 1x10 6 GFP LIN - /CD45 + /Sca-1 + iv (HSC) Peripheral blood 69,94% 45% 21% 18% 4% 8% 8% B220 B220 CD3 CD3 Gr-1 Gr-1 M GFP 19% 15% 46% 32% 55% 9% GFP

18 VSELs as circulating para-medics in the body

19 Oct-4 + cells in human Cord Blood Baal N et al. Expression of transcription factor Oct-4 and other embryonic genes in CD133 positive cells from human umbilical cord blood. Thromb Haemost 2004; 92: McGuckin CP et al. Production of stem cells with embryonic characteristics from human umbilical cord blood. Cell Prolif 2005; 38: Zhao Y, Wang H, Mazzone T. Identification of stem cells from human umbilical cord blood with embryonic and hematopoietic characteristics. Exp Cell Res 2006; 312: Sun B et al. Induction of human umbilical cord blood-derived stem cells with embryonic stem cell phenotypes into insulin producing islets-like structure. BBRC 2007; 354:

20 VSEL are mobilized into Umbilical Cord Blood

21 Sorting strategy for isolating UCB- derived VSELs SSC SSC Beads ( >2µm) R1 ~90% R1 FSC FSC R3 R4 ~0.01% ~0.15% CD133 Counts R2 ~5.5% VSELs CD133 + Lin - CD45 - CD45 HSCs CD133 + Lin - CD45 + Lineage

22 Human UCB-VSELs, Erythrocytes and Platelets 10µm 6µm 4µm 2µm 1µm Synthetic beads Platelets 2.98±0.45µm CB-VSELs 6.75 ± 1.04µm Erythrocytes 7.87±0.85µm

23 UCB-derived VSELS SSEA-4 DAPI OCT4 DAPI NANOG Leukemia 2007, 21, DAPI

24 TEM of UCB-derived VSELs 1 μm 1 μm 1 μm Leukemia 2007, 21,

25 Large Scale Isolation of VSELs from UCB Removal of erythrocytes - Ficoll/Paque centrifugation - Hypotonic lysis Enrichment for cells to be sorted - Immunomagnetic selection - Aldefluor staining

26 Recovery of VSELs from Cord Blood processed with MicroBeads Protocol 1: Lysis of RBCs with Ammonium Chloride UCB sample Protocol 2: Centrifugation on Ficoll-Paque Nucleated Cells (NCs) Mononuclear Cells (MNCs) MACS Isolation SSEA1 beads negative selection CD133 beads positive selection CD45 beads negative selection CD34 beads positive selection Lineage beads negative selection

27 Recovery of VSELs from UCB Processed with Ficoll-Paque and Lysis of RBCs Protocol 1: Lysis of RBCs with Ammonium Chloride UCB sample Protocol 2: Centrifugation on Ficoll-Paque Total Nucleated Cells (TNCs) Mononuclear Cells (MNCs) No. of cells/ ml UCB Lin - CD45 - fraction * * No. of cells/ ml UCB Lin - CD45 + fraction CD34 + CD133 + CD34 + CD133 + Protocol 1 (Lysis of RBCs) Protocol 2 (Ficoll-Paque)

28 Separation of UCB-VSELs based on ALDH activity CB Total NCs MACS Isolation CD133 + cells Lysis of RBCs Staining for CD133 SORT CD45 - /GlyA - /CD133 + / ALDH HIGH CD45 - /GlyA - /CD133 + / ALDH LOW CD45 + /GlyA - /CD133 + / ALDH HIGH SORT FACS Isolation (MoFlo cell sorter) Staining for CD133, GlyA, CD45 Staining for ALDH CD45 + /GlyA - /CD133 + / ALDH HIGH

29 Gating strategy for FACS sorting UCB-VSELs and HSCs based on ALDH activity R1 SSC GlyA R2 R3 FSC CD45 R4 R5 R6 R7 CD133 CD133 ALDH ALDH R4: CD45-/GlyA-/CD133+/ALDH LOW R5: CD45-/GlyA-/CD133+/ALDH HIGH R6: CD45+/GlyA-/CD133+/ALDH LOW R7: CD45+/GlyA-/CD133+/ALDH HIGH

30 Number of VSELs per 100 ml of UCB blood Phenotype of cells Number per 100 ml of UCB CD45 - /GlyA - /CD133 + /ALDH high ~ 10 3 CD45 - /GlyA - /CD133 + /ALDH low ~3.6x10 3 CD45 + /GlyA - /CD133 + /ALDH low ~46x10 3 CD45 + /GlyA - /CD133 + /ALDH high ~375x10 3

31 In vitro assays - UCB-VSELs CD45 + /GlyA - /CD133 + / ALDH HIGH CD45 + /GlyA - /CD133 + / ALDH LOW CD45 - /GlyA - /CD133 + / ALDH HIGH CD45 - /GlyA - /CD133 + / ALDH LOW Co-culture with OP-9 cells 5 days Clonogenic Assay 10 days CD133 + /GlyA - /CD45 - CD133 + /GlyA - /CD45 - /ALDH LOW /ALDH HIGH

32 Oct-4 Expression in Freshly Isolated Subpopulations of UCB-VSELs CD45 - /GlyA - /CD133 + /ALDH LOW Oct-4/ CD45 Oct-4/ DAPI ALDH/ DAPI Combo/ Br 10µm CD45 - /GlyA - /CD133 + /ALDH HIGH Oct-4/ CD45 Oct-4/ DAPI ALDH/ DAPI Combo/ Br 10µm

33 ALDH lo CD45- ALDH hi CD45- ALDH lo CD45+ ALDH hi CD ALDH lo CD45- ALDH hi CD45- ALDH lo CD45+ ALDH hi CD45+ CD45 - /GlyA - /CD133 + ALDH low CD45 - /GlyA - /CD133 + ALDH high CD45 + /GlyA - /CD133 + ALDH low CD45 + /GlyA - /CD133 + ALDH high CD45 - /GlyA - /CD133 + ALDH low CD45 - /GlyA - /CD133 + ALDH high CD45 + /GlyA - /CD133 + ALDH low CD45 + /GlyA - /CD133 + ALDH high Clonogenic Potential of Sorted Cells ALDH lo CD45- ALDH hi CD45- ALDH lo CD45+ ALDH hi CD45+ Number of CFU-C from 1x10 3 cells CD45 - /GlyA - /CD133 + ALDH low CD45 - /GlyA - /CD133 + ALDH high CD45 + /GlyA - /CD133 + ALDH low CD45 + /GlyA - /CD133 + ALDH high Number of CFU-C from 1x10 3 cells Number of CFU-C from 1x10 3 cells Freshly isolated CB-VSEL CB-VSELs after co-culture with OP-9 cells CB-VSELs expanded over OP-9 cell line and replated in MethoCult

34 Hematopoietic Differentiation of UCB-VSELs % of cells expressing CD45 among all cultured cells % of cells expressing each marker among the CD45+ cells % of CD45+ cells CD45-/GlyA-/CD133+/ALDH HIGH CD45-/GlyA-/CD133+/ALDH LOW N=3; P< CD45 CD14 GlyA * CD3 CD19 CD41

35 In Vivo Transplants CD45 - /GlyA - /CD133 + / ALDH HIGH CD45 - /GlyA - /CD133 + / ALDH LOW CD45 + /GlyA - /CD133 + / ALDH HIGH Sorted cells 5 days Co-culture with OP-9 cells 1 mo Flow cytometric analysis CD45 + /GlyA - /CD133 + / ALDH LOW Chimerism: -BM -PB -Spleen

36 CHIMERISM of SCID/NOD MICE chimerism (%) Bone Marrow chimerism (%) Spleen CD45 CD3 CD19 CD66b GlyA 0 CD45 CD3 CD19 CD66b GlyA Peripheral Blood chimerism (%) CD45 CD3 CD19 CD66b GlyA Legend: CD45 - /ALDH low CD45 - /ALDH high CD45 + /ALDH low CD45 + /ALDH high

37 Recovery of CB-VSELs from UCB Processed with AXP AutoXpress Platform UCB Unit Full UCB sample Processing Freezing/ Thawing Procedure 1 SCs Concentrate 2 SCs Concentrate No. of cells [x10 6 ] CD133 + Lin - CD45 - (CB-VSELs) ± 0.0 (x 10 6 ) 58.5 ± 15.9% * 40.5 ± 8.5% Sample # 1 # 2 # 3 3

38 Conclusions: Bone marrow is the home not only of hematopoietic stem cells but we obtained an evidence that in bone marrow as well as in other organs reside a population of germ line/epiblast-derived pluripotent very small embryonic-like (VSELs) stem cells. VSELs stem cells could be released/mobilized from neonatal BM (and other niches?) and circulate in neonatal peripheral blood (cord blood). VSELs may give rise to hematopoietic cells. Based on our in vitro and in vivo data we postulate following hierarchy of hematopoietic stem cells in UCB (from most primitive to more differentiated) i) CD45 - /CD133 + /ALDH low, ii) CD45 - /CD133 + /ALDH high, iii) CD45 + /CD133 + /ALDH low and iv) CD45 + /CD133 + /ALDH high. We also postulate that as we have already shown for murine BM-derived VSELs, human UCB-derived CD45 negative VSELs could correspond to a population of most primitive long term repopulating HSC (LT-HSC). Of note, we also found that currently employed, routine UCB processing strategies may lead up to ~50% unwanted loss of these small cells that are endowed with such remarkable hematopoietic activity.

39 Acknowledgments: JGB CC Stem Cell Institute: Thank you for your attention!!! Janina Ratajczak Magda Kucia Ewa Zuba-Surma Marcin Wysoczynski Dong Myung-Shin Iza Klich Rui Liu Wu Wan Case Western University and Cleveland Cord Blood Center: Mary J Laughlin Nick Greco

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